BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 033026
         (129 letters)

Database: pdbaa 
           62,578 sequences; 14,973,337 total letters

Searching..................................................done



>pdb|1X1O|A Chain A, Crystal Structure Of Project Id Tt0268 From Thermus
           Thermophilus Hb8
 pdb|1X1O|B Chain B, Crystal Structure Of Project Id Tt0268 From Thermus
           Thermophilus Hb8
 pdb|1X1O|C Chain C, Crystal Structure Of Project Id Tt0268 From Thermus
           Thermophilus Hb8
          Length = 286

 Score =  102 bits (254), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 55/125 (44%), Positives = 77/125 (61%), Gaps = 2/125 (1%)

Query: 7   GDVTCMATIPLDMEVEAHFLAKEDGIIAGIALAEMIFHEVDPSLKVEWSLKDGDHVHKGL 66
           GD+T +  +P D+E EA  LAKE G++AG+ +AE +F   DP       + +G  V +G 
Sbjct: 29  GDLTSLLVVPEDLEGEAVILAKEGGVLAGLWVAERVFALADPRTAFTPLVAEGARVAEGT 88

Query: 67  QFGKVSGRAHSIVIAERVVLNFMQRMSGIATLTRAMAD--LAHPATILETRKTAPTLRLL 124
           +  +V G    I+  ER+ LN +QR+SGIATLTRA  +      A IL+TRKT P LR L
Sbjct: 89  EVARVRGPLRGILAGERLALNLLQRLSGIATLTRAYVEALAGTKAQILDTRKTTPGLRAL 148

Query: 125 DKWAV 129
           +K+AV
Sbjct: 149 EKYAV 153


>pdb|3GNN|A Chain A, Crystal Structure Of Nicotinate-Nucleotide
           Pyrophosphorylase From Burkholderi Pseudomallei
 pdb|3GNN|B Chain B, Crystal Structure Of Nicotinate-Nucleotide
           Pyrophosphorylase From Burkholderi Pseudomallei
          Length = 298

 Score = 80.9 bits (198), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 42/117 (35%), Positives = 67/117 (57%), Gaps = 2/117 (1%)

Query: 15  IPLDMEVEAHFLAKEDGIIAGIALAEMIFHEVDPSLKVEWSLKDGDHVHKGLQFGKVSGR 74
           +P      A  + +ED ++ G+   + +   VDPS++V+W  ++GD +       ++ G 
Sbjct: 51  VPDGAPRRARVIVREDAVLCGVPWFDAVVRAVDPSIEVDWRHREGDRMSADSTVCELRGP 110

Query: 75  AHSIVIAERVVLNFMQRMSGIATLTRAMADLAHP--ATILETRKTAPTLRLLDKWAV 129
           A +++ AER  LNF+Q +SG+A+ TR   D      A IL+TRKT P LRL  K+AV
Sbjct: 111 ARALLTAERNALNFLQLLSGVASATRQYVDRIADTRARILDTRKTLPGLRLAQKYAV 167


>pdb|3TQV|A Chain A, Structure Of The Nicotinate-Nucleotide Pyrophosphorylase
           From Francisella Tularensis.
 pdb|3TQV|B Chain B, Structure Of The Nicotinate-Nucleotide Pyrophosphorylase
           From Francisella Tularensis
          Length = 287

 Score = 80.5 bits (197), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 71/127 (55%), Gaps = 4/127 (3%)

Query: 5   SAGDVTCMATIPLDMEVEAHFLAKEDGIIAGIALAEMIFHEVDPSLKVEWSLKDGDHVHK 64
           + GD+T  A +  D++  A  + +E+ I+ G   A  + +++D ++++ W   D   V  
Sbjct: 32  ATGDIT--AQLAEDIDTTAFCITREEXILCGQDFANEVINQLDKNIQITWLYSDAQKVPA 89

Query: 65  GLQFGKVSGRAHSIVIAERVVLNFMQRMSGIATLTRAMADL--AHPATILETRKTAPTLR 122
             +  ++ G   SI+ AER +LNF+Q +SG AT+T  +  L   +   +L+TRKT P  R
Sbjct: 90  NARIFELKGNVRSILTAERTILNFIQXLSGTATVTNKLVKLISQYKTKLLDTRKTIPGFR 149

Query: 123 LLDKWAV 129
           L  K+AV
Sbjct: 150 LAQKYAV 156


>pdb|3C2R|A Chain A, Crystal Structure Of The Quinolinate Phosphoribosyl
           Transferase (Bna6) From Sachharomyces Cerevisiae
           Complexed With The Inhibitor Phthalate
 pdb|3C2R|B Chain B, Crystal Structure Of The Quinolinate Phosphoribosyl
           Transferase (Bna6) From Sachharomyces Cerevisiae
           Complexed With The Inhibitor Phthalate
          Length = 295

 Score = 77.4 bits (189), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 42/118 (35%), Positives = 69/118 (58%), Gaps = 12/118 (10%)

Query: 22  EAHFLAKEDGIIAGIALAEMIFHEVDPSLKVEWSLKDGDHVHKG------LQFGKVSGRA 75
           EA+   K+DG++ G+  A+ +F++ +  L+VEW  K+G  +         +   K++G A
Sbjct: 42  EANLYCKQDGMLCGVPFAQEVFNQCE--LQVEWLFKEGSFLEPSKNDSGKIVVAKITGPA 99

Query: 76  HSIVIAERVVLNFMQRMSGIATLTRAMADLA----HPATILETRKTAPTLRLLDKWAV 129
            +I++AER  LN + R SGIAT +  +  LA    +  TI  TRKT P LR L+K+++
Sbjct: 100 KNILLAERTALNILSRSSGIATASHKIISLARSTGYKGTIAGTRKTTPGLRRLEKYSM 157


>pdb|3C2E|A Chain A, Crystal Structure At 1.9a Of The Apo Quinolinate
           Phosphoribosyl Transferase (Bna6) From Saccharomyces
           Cerevisiae
 pdb|3C2O|A Chain A, Crystal Structure Of The Quinolinate Phosphoribosyl
           Transferase (Bna6) From Sachharomyces Cerevisiae
           Complexed With Quinolinate
 pdb|3C2F|A Chain A, Crystal Structure Of The Quinolinate Phosphoribosyl
           Transferase (Bna6) From Saccharomyces Cerevisiae
           Complexed With Prpp
 pdb|3C2V|A Chain A, Crystal Structure Of The Quinolinate Phosphoribosyl
           Transferase (Bna6) From Saccharomyces Cerevisiae
           Complexed With Prpp And The Inhibitor Phthalate
          Length = 294

 Score = 77.0 bits (188), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 42/118 (35%), Positives = 69/118 (58%), Gaps = 12/118 (10%)

Query: 22  EAHFLAKEDGIIAGIALAEMIFHEVDPSLKVEWSLKDGDHVHKG------LQFGKVSGRA 75
           EA+   K+DG++ G+  A+ +F++ +  L+VEW  K+G  +         +   K++G A
Sbjct: 41  EANLYCKQDGMLCGVPFAQEVFNQCE--LQVEWLFKEGSFLEPSKNDSGKIVVAKITGPA 98

Query: 76  HSIVIAERVVLNFMQRMSGIATLTRAMADLA----HPATILETRKTAPTLRLLDKWAV 129
            +I++AER  LN + R SGIAT +  +  LA    +  TI  TRKT P LR L+K+++
Sbjct: 99  KNILLAERTALNILSRSSGIATASHKIISLARSTGYKGTIAGTRKTTPGLRRLEKYSM 156


>pdb|3L0G|A Chain A, Crystal Structure Of Nicotinate-Nucleotide
           Pyrophosphorylase From Ehrlichia Chaffeensis At 2.05a
           Resolution
 pdb|3L0G|B Chain B, Crystal Structure Of Nicotinate-Nucleotide
           Pyrophosphorylase From Ehrlichia Chaffeensis At 2.05a
           Resolution
 pdb|3L0G|C Chain C, Crystal Structure Of Nicotinate-Nucleotide
           Pyrophosphorylase From Ehrlichia Chaffeensis At 2.05a
           Resolution
 pdb|3L0G|D Chain D, Crystal Structure Of Nicotinate-Nucleotide
           Pyrophosphorylase From Ehrlichia Chaffeensis At 2.05a
           Resolution
          Length = 300

 Score = 74.3 bits (181), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 48/127 (37%), Positives = 70/127 (55%), Gaps = 7/127 (5%)

Query: 7   GDVTCMATIPLDMEVEAHFLAKEDGIIAGIALAEMIFHEVDPSLKVEWSLKDGDHVHKGL 66
           GD+T   +I ++ +V      +E+ ++ GI + E +F+     +K E   KDGD   K  
Sbjct: 42  GDIT-TNSILINEKVNFAINTRENLVVCGIPILEEVFNMNKEHVKYEIHKKDGDITGKNS 100

Query: 67  QFGKVSGRAHSIVI--AERVVLNFMQRMSGIATLTRAMADLAH--PATILETRKTAPTLR 122
               VSG A +I +   ERV+LNF+Q  SGIA++TR   D        I  TRKT P LR
Sbjct: 101 TL--VSGEALAIYLLPIERVILNFIQHASGIASITRQFVDEVSGTKVKIRSTRKTTPGLR 158

Query: 123 LLDKWAV 129
           +LDK++V
Sbjct: 159 MLDKYSV 165


>pdb|1QPR|A Chain A, Quinolinate Phosphoribosyltransferase (Qaprtase) From
           Mycobacterium Tuberculosis In Complex With Phthalate And
           Prpcp
 pdb|1QPR|B Chain B, Quinolinate Phosphoribosyltransferase (Qaprtase) From
           Mycobacterium Tuberculosis In Complex With Phthalate And
           Prpcp
 pdb|1QPR|C Chain C, Quinolinate Phosphoribosyltransferase (Qaprtase) From
           Mycobacterium Tuberculosis In Complex With Phthalate And
           Prpcp
 pdb|1QPR|D Chain D, Quinolinate Phosphoribosyltransferase (Qaprtase) From
           Mycobacterium Tuberculosis In Complex With Phthalate And
           Prpcp
 pdb|1QPR|E Chain E, Quinolinate Phosphoribosyltransferase (Qaprtase) From
           Mycobacterium Tuberculosis In Complex With Phthalate And
           Prpcp
 pdb|1QPR|F Chain F, Quinolinate Phosphoribosyltransferase (Qaprtase) From
           Mycobacterium Tuberculosis In Complex With Phthalate And
           Prpcp
 pdb|1QPN|A Chain A, Quinolinate Phosphoribosyl Transferase From Mycobacterium
           Tuberculosis In Complex With Ncnn
 pdb|1QPN|B Chain B, Quinolinate Phosphoribosyl Transferase From Mycobacterium
           Tuberculosis In Complex With Ncnn
 pdb|1QPN|C Chain C, Quinolinate Phosphoribosyl Transferase From Mycobacterium
           Tuberculosis In Complex With Ncnn
 pdb|1QPN|D Chain D, Quinolinate Phosphoribosyl Transferase From Mycobacterium
           Tuberculosis In Complex With Ncnn
 pdb|1QPN|E Chain E, Quinolinate Phosphoribosyl Transferase From Mycobacterium
           Tuberculosis In Complex With Ncnn
 pdb|1QPN|F Chain F, Quinolinate Phosphoribosyl Transferase From Mycobacterium
           Tuberculosis In Complex With Ncnn
 pdb|1QPO|A Chain A, Quinolinate Phosphoribosyl Transferase (qaprtase)
           Apo-enzyme From Mycobacterium Tuberculosis
 pdb|1QPO|B Chain B, Quinolinate Phosphoribosyl Transferase (qaprtase)
           Apo-enzyme From Mycobacterium Tuberculosis
 pdb|1QPO|C Chain C, Quinolinate Phosphoribosyl Transferase (qaprtase)
           Apo-enzyme From Mycobacterium Tuberculosis
 pdb|1QPO|D Chain D, Quinolinate Phosphoribosyl Transferase (qaprtase)
           Apo-enzyme From Mycobacterium Tuberculosis
 pdb|1QPO|E Chain E, Quinolinate Phosphoribosyl Transferase (qaprtase)
           Apo-enzyme From Mycobacterium Tuberculosis
 pdb|1QPO|F Chain F, Quinolinate Phosphoribosyl Transferase (qaprtase)
           Apo-enzyme From Mycobacterium Tuberculosis
 pdb|1QPQ|A Chain A, Structure Of Quinolinic Acid Phosphoribosyltransferase
           From Mycobacterium Tuberculosis: A Potential Tb Drug
           Target
 pdb|1QPQ|B Chain B, Structure Of Quinolinic Acid Phosphoribosyltransferase
           From Mycobacterium Tuberculosis: A Potential Tb Drug
           Target
 pdb|1QPQ|C Chain C, Structure Of Quinolinic Acid Phosphoribosyltransferase
           From Mycobacterium Tuberculosis: A Potential Tb Drug
           Target
 pdb|1QPQ|D Chain D, Structure Of Quinolinic Acid Phosphoribosyltransferase
           From Mycobacterium Tuberculosis: A Potential Tb Drug
           Target
 pdb|1QPQ|E Chain E, Structure Of Quinolinic Acid Phosphoribosyltransferase
           From Mycobacterium Tuberculosis: A Potential Tb Drug
           Target
 pdb|1QPQ|F Chain F, Structure Of Quinolinic Acid Phosphoribosyltransferase
           From Mycobacterium Tuberculosis: A Potential Tb Drug
           Target
          Length = 284

 Score = 71.2 bits (173), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 45/126 (35%), Positives = 67/126 (53%), Gaps = 4/126 (3%)

Query: 8   DVTCMATIPLDMEVEAHFLAKEDGIIAGIALAEMIFHEV--DPSLKVEWSLKDGDHVHKG 65
           DVT +AT+P      A  + +E G++AG+ +A +  +EV      +V   ++DG  V  G
Sbjct: 27  DVTTLATVPASATTTASLVTREAGVVAGLDVALLTLNEVLGTNGYRVLDRVEDGARVPPG 86

Query: 66  LQFGKVSGRAHSIVIAERVVLNFMQRMSGIATLTRAMADLAH--PATILETRKTAPTLRL 123
                +  +   ++ AER +LN +  +SGIAT T A  D      A I +TRKT P LR 
Sbjct: 87  EALMTLEAQTRGLLTAERTMLNLVGHLSGIATATAAWVDAVRGTKAKIRDTRKTLPGLRA 146

Query: 124 LDKWAV 129
           L K+AV
Sbjct: 147 LQKYAV 152


>pdb|1QAP|A Chain A, Quinolinic Acid Phosphoribosyltransferase With Bound
           Quinolinic Acid
 pdb|1QAP|B Chain B, Quinolinic Acid Phosphoribosyltransferase With Bound
           Quinolinic Acid
          Length = 296

 Score = 70.1 bits (170), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 65/128 (50%), Gaps = 3/128 (2%)

Query: 5   SAGDVTCMATIPLDMEVEAHFLAKEDGIIAGIALAEMIFHEV-DPSLKVEWSLKDGDHVH 63
            AG+      +P D +  A  + +EDG+  G    E +F ++    +++ W + DGD +H
Sbjct: 39  DAGNDITAQLLPADTQAHATVITREDGVFCGKRWVEEVFIQLAGDDVRLTWHVDDGDAIH 98

Query: 64  KGLQFGKVSGRAHSIVIAERVVLNFMQRMSGIATLTRAMADL--AHPATILETRKTAPTL 121
                 ++ G A  ++  ER  LNF+Q +SG+A+  R    L       +L+TRKT P L
Sbjct: 99  ANQTVFELQGPARVLLTGERTALNFVQTLSGVASEVRRYVGLLAGTQTQLLDTRKTLPGL 158

Query: 122 RLLDKWAV 129
           R   K+AV
Sbjct: 159 RTALKYAV 166


>pdb|3PAJ|A Chain A, 2.00 Angstrom Resolution Crystal Structure Of A
           Quinolinate Phosphoribosyltransferase From Vibrio
           Cholerae O1 Biovar Eltor Str. N16961
 pdb|3PAJ|B Chain B, 2.00 Angstrom Resolution Crystal Structure Of A
           Quinolinate Phosphoribosyltransferase From Vibrio
           Cholerae O1 Biovar Eltor Str. N16961
          Length = 320

 Score = 68.9 bits (167), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 68/126 (53%), Gaps = 3/126 (2%)

Query: 6   AGDVTCMATIPLDMEVEAHFLAKEDGIIAGIALAEMIFHEVDPSLKVEWSLKDGDHVHKG 65
           A D+T  + IP D    A  + +E G+  G   A+ +F ++   + +EW ++DGD +   
Sbjct: 65  AADITA-SLIPADRISTATIITREAGVFCGQLWADEVFKQLGGQVSIEWHVQDGDTLTPN 123

Query: 66  LQFGKVSGRAHSIVIAERVVLNFMQRMSGIATLT-RAMADL-AHPATILETRKTAPTLRL 123
                ++G A  ++  ER  +NF+Q +SG AT T R + +L      +L+TRKT P LR 
Sbjct: 124 QTLCTLTGPARILLTGERNAMNFIQTLSGCATATARYVQELKGTQCRLLDTRKTIPGLRS 183

Query: 124 LDKWAV 129
             K+AV
Sbjct: 184 ALKYAV 189


>pdb|1O4U|A Chain A, Crystal Structure Of A Nicotinate Nucleotide
           Pyrophosphorylase (Tm1645) From Thermotoga Maritima At
           2.50 A Resolution
 pdb|1O4U|B Chain B, Crystal Structure Of A Nicotinate Nucleotide
           Pyrophosphorylase (Tm1645) From Thermotoga Maritima At
           2.50 A Resolution
          Length = 285

 Score = 60.8 bits (146), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 67/120 (55%), Gaps = 4/120 (3%)

Query: 12  MATIPL-DMEVEAHFLAKEDGIIA-GIALAEMIFHEVDPSLKVEWSLKDGDHVHKGLQFG 69
           +A+ PL +    AH L K + ++A GI ++ M   ++   L  +++++DG+++      G
Sbjct: 33  LASFPLRNTTAGAHLLLKTENVVASGIEVSRMFLEKM--GLLSKFNVEDGEYLEGTGVIG 90

Query: 70  KVSGRAHSIVIAERVVLNFMQRMSGIATLTRAMADLAHPATILETRKTAPTLRLLDKWAV 129
           ++ G  + +++AER +LN +  M  +AT TR  A+    A I  TRK  P L +L K AV
Sbjct: 91  EIEGNTYKLLVAERTLLNVLSVMFSVATTTRRFAEKLKHAKIAATRKILPGLGVLQKIAV 150


>pdb|2JBM|A Chain A, Qprtase Structure From Human
 pdb|2JBM|B Chain B, Qprtase Structure From Human
 pdb|2JBM|C Chain C, Qprtase Structure From Human
 pdb|2JBM|D Chain D, Qprtase Structure From Human
 pdb|2JBM|E Chain E, Qprtase Structure From Human
 pdb|2JBM|F Chain F, Qprtase Structure From Human
 pdb|2JBM|G Chain G, Qprtase Structure From Human
 pdb|2JBM|H Chain H, Qprtase Structure From Human
 pdb|2JBM|I Chain I, Qprtase Structure From Human
 pdb|2JBM|J Chain J, Qprtase Structure From Human
 pdb|2JBM|K Chain K, Qprtase Structure From Human
 pdb|2JBM|L Chain L, Qprtase Structure From Human
          Length = 299

 Score = 55.5 bits (132), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 60/112 (53%), Gaps = 6/112 (5%)

Query: 22  EAHFLAKEDGIIAGIALAEMIFHEVDPSLKVEWSLKDGDHVHKGLQFGKVSGRAHSIVIA 81
           +A   AK  G++AG    + IF +++   +V W L +G  +    +  +V G AH +++ 
Sbjct: 45  QAALWAKSPGVLAGQPFFDAIFTQLN--CQVSWFLPEGSKLVPVARVAEVRGPAHCLLLG 102

Query: 82  ERVVLNFMQRMSGIATLTRAMADLAHPAT----ILETRKTAPTLRLLDKWAV 129
           ERV LN + R SGIA+   A  + A  A     +  TRKT P  RL++K+ +
Sbjct: 103 ERVALNTLARCSGIASAAAAAVEAARGAGWTGHVAGTRKTTPGFRLVEKYGL 154


>pdb|3LAR|A Chain A, Crystal Structure Of Human Quinolinate
           Phosphoribosyltransferase
 pdb|3LAR|B Chain B, Crystal Structure Of Human Quinolinate
           Phosphoribosyltransferase
 pdb|3LAR|C Chain C, Crystal Structure Of Human Quinolinate
           Phosphoribosyltransferase
 pdb|3LAR|D Chain D, Crystal Structure Of Human Quinolinate
           Phosphoribosyltransferase
 pdb|3LAR|E Chain E, Crystal Structure Of Human Quinolinate
           Phosphoribosyltransferase
 pdb|3LAR|F Chain F, Crystal Structure Of Human Quinolinate
           Phosphoribosyltransferase
          Length = 305

 Score = 55.5 bits (132), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 60/112 (53%), Gaps = 6/112 (5%)

Query: 22  EAHFLAKEDGIIAGIALAEMIFHEVDPSLKVEWSLKDGDHVHKGLQFGKVSGRAHSIVIA 81
           +A   AK  G++AG    + IF +++   +V W L +G  +    +  +V G AH +++ 
Sbjct: 43  QAALWAKSPGVLAGQPFFDAIFTQLN--CQVSWFLPEGSKLVPVARVAEVRGPAHCLLLG 100

Query: 82  ERVVLNFMQRMSGIATLTRAMADLAHPAT----ILETRKTAPTLRLLDKWAV 129
           ERV LN + R SGIA+   A  + A  A     +  TRKT P  RL++K+ +
Sbjct: 101 ERVALNTLARCSGIASAAAAAVEAARGAGWTGHVAGTRKTTPGFRLVEKYGL 152


>pdb|2B7N|A Chain A, Crystal Structure Of Quinolinic Acid
           Phosphoribosyltransferase From Helicobacter Pylori
 pdb|2B7N|B Chain B, Crystal Structure Of Quinolinic Acid
           Phosphoribosyltransferase From Helicobacter Pylori
 pdb|2B7N|C Chain C, Crystal Structure Of Quinolinic Acid
           Phosphoribosyltransferase From Helicobacter Pylori
 pdb|2B7P|A Chain A, Crystal Structure Of Quinolinic Acid
           Phosphoribosyltransferase From Helicobacter Pylori
 pdb|2B7P|B Chain B, Crystal Structure Of Quinolinic Acid
           Phosphoribosyltransferase From Helicobacter Pylori
 pdb|2B7P|C Chain C, Crystal Structure Of Quinolinic Acid
           Phosphoribosyltransferase From Helicobacter Pylori
 pdb|2B7Q|A Chain A, Crystal Structure Of Quinolinic Acid
           Phosphoribosyltransferase From Helicobacter Pylori
 pdb|2B7Q|B Chain B, Crystal Structure Of Quinolinic Acid
           Phosphoribosyltransferase From Helicobacter Pylori
 pdb|2B7Q|C Chain C, Crystal Structure Of Quinolinic Acid
           Phosphoribosyltransferase From Helicobacter Pylori
          Length = 273

 Score = 54.3 bits (129), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 61/118 (51%), Gaps = 12/118 (10%)

Query: 18  DMEVEAHFLAKEDGIIAG----IALAEMIFHEVDPSLKVEWSLKDGDHVHKGLQFGKVSG 73
           D +  A   AK++G+ +G    + L EM   E   ++K +   K  D + +      + G
Sbjct: 28  DFKATAFVRAKQEGVFSGEKYALELLEMTGIECVQTIKDKERFKPKDALME------IRG 81

Query: 74  RAHSIVIAERVVLNFMQRMSGIATLTRAMADL--AHPATILETRKTAPTLRLLDKWAV 129
               ++  ER +LN +Q  SGIATLT    +   +H   +L+TRKT P LR+ +K++V
Sbjct: 82  DFSMLLKVERTLLNLLQHSSGIATLTSRFVEALNSHKVRLLDTRKTRPLLRIFEKYSV 139


>pdb|1TD9|A Chain A, Crystal Structure Of A Phosphotransacetylase From Bacillus
           Subtilis
 pdb|1TD9|B Chain B, Crystal Structure Of A Phosphotransacetylase From Bacillus
           Subtilis
 pdb|1TD9|C Chain C, Crystal Structure Of A Phosphotransacetylase From Bacillus
           Subtilis
 pdb|1TD9|D Chain D, Crystal Structure Of A Phosphotransacetylase From Bacillus
           Subtilis
 pdb|1TD9|E Chain E, Crystal Structure Of A Phosphotransacetylase From Bacillus
           Subtilis
 pdb|1TD9|F Chain F, Crystal Structure Of A Phosphotransacetylase From Bacillus
           Subtilis
 pdb|1XCO|A Chain A, Crystal Structure Of A Phosphotransacetylase From Bacillus
           Subtilis In Complex With Acetylphosphate
 pdb|1XCO|B Chain B, Crystal Structure Of A Phosphotransacetylase From Bacillus
           Subtilis In Complex With Acetylphosphate
 pdb|1XCO|C Chain C, Crystal Structure Of A Phosphotransacetylase From Bacillus
           Subtilis In Complex With Acetylphosphate
 pdb|1XCO|D Chain D, Crystal Structure Of A Phosphotransacetylase From Bacillus
           Subtilis In Complex With Acetylphosphate
 pdb|1XCO|E Chain E, Crystal Structure Of A Phosphotransacetylase From Bacillus
           Subtilis In Complex With Acetylphosphate
 pdb|1XCO|F Chain F, Crystal Structure Of A Phosphotransacetylase From Bacillus
           Subtilis In Complex With Acetylphosphate
          Length = 329

 Score = 26.6 bits (57), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 14/34 (41%), Positives = 18/34 (52%)

Query: 62  VHKGLQFGKVSGRAHSIVIAERVVLNFMQRMSGI 95
           V+KGL  G VSG AHS     R  L  ++   G+
Sbjct: 119 VYKGLADGLVSGAAHSTADTVRPALQIIKTKEGV 152


>pdb|2DPY|A Chain A, Crystal Structure Of The Flagellar Type Iii Atpase Flii
 pdb|2DPY|B Chain B, Crystal Structure Of The Flagellar Type Iii Atpase Flii
          Length = 438

 Score = 25.8 bits (55), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 14/33 (42%), Positives = 18/33 (54%)

Query: 73  GRAHSIVIAERVVLNFMQRMSGIATLTRAMADL 105
           GRA S+VIA    ++ + RM G A  TR   D 
Sbjct: 210 GRARSVVIAAPADVSPLLRMQGAAYATRIAEDF 242


>pdb|1J4A|A Chain A, Insights Into Domain Closure, Substrate Specificity And
           Catalysis Of D-Lactate Dehydrogenase From Lactobacillus
           Bulgaricus
 pdb|1J4A|B Chain B, Insights Into Domain Closure, Substrate Specificity And
           Catalysis Of D-Lactate Dehydrogenase From Lactobacillus
           Bulgaricus
 pdb|1J4A|C Chain C, Insights Into Domain Closure, Substrate Specificity And
           Catalysis Of D-Lactate Dehydrogenase From Lactobacillus
           Bulgaricus
 pdb|1J4A|D Chain D, Insights Into Domain Closure, Substrate Specificity And
           Catalysis Of D-Lactate Dehydrogenase From Lactobacillus
           Bulgaricus
          Length = 333

 Score = 25.8 bits (55), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 2/63 (3%)

Query: 56  LKDGDHVHKGLQFGKVSGRAHSIVIAERVVLNFMQRMSGIATLTRAMADLAHPATILETR 115
           L D D V +GL  GK+ G A  +   E  + N  +   G       +ADL     +L T 
Sbjct: 239 LVDTDAVIRGLDSGKIFGYAMDVYEGEVGIFN--EDWEGKEFPDARLADLIARPNVLVTP 296

Query: 116 KTA 118
           KTA
Sbjct: 297 KTA 299


  Database: pdbaa
    Posted date:  Mar 3, 2013 10:34 PM
  Number of letters in database: 14,973,337
  Number of sequences in database:  62,578
  
Lambda     K      H
   0.323    0.134    0.398 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,725,106
Number of Sequences: 62578
Number of extensions: 131827
Number of successful extensions: 295
Number of sequences better than 100.0: 22
Number of HSP's better than 100.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 262
Number of HSP's gapped (non-prelim): 22
length of query: 129
length of database: 14,973,337
effective HSP length: 88
effective length of query: 41
effective length of database: 9,466,473
effective search space: 388125393
effective search space used: 388125393
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 45 (21.9 bits)