BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033026
(129 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P77938|NADC_RHORU Probable nicotinate-nucleotide pyrophosphorylase [carboxylating]
OS=Rhodospirillum rubrum GN=nadC PE=3 SV=1
Length = 296
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 75/126 (59%), Gaps = 2/126 (1%)
Query: 6 AGDVTCMATIPLDMEVEAHFLAKEDGIIAGIALAEMIFHEVDPSLKVEWSLKDGDHVHKG 65
AGD+T ATIP A F+A++ GI+AG+ A F +D ++ L+DG + G
Sbjct: 30 AGDITSTATIPAATRAHARFVARQPGILAGLGCARSAFALLDDTVTFTTPLEDGAEIAAG 89
Query: 66 LQFGKVSGRAHSIVIAERVVLNFMQRMSGIATLTRAMAD-LAHP-ATILETRKTAPTLRL 123
+V+G A +I+ AER LNF+ +SGIAT TR D +AH A + TRKT P LR
Sbjct: 90 QTVAEVAGAARTILAAERTALNFLGHLSGIATRTRRFGDAIAHTRARLTCTRKTTPGLRG 149
Query: 124 LDKWAV 129
L+K+AV
Sbjct: 150 LEKYAV 155
>sp|P30819|NADC_PSEAE Nicotinate-nucleotide pyrophosphorylase [carboxylating]
OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C
/ PRS 101 / LMG 12228) GN=nadC PE=3 SV=2
Length = 282
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 69/126 (54%), Gaps = 3/126 (2%)
Query: 6 AGDVTCMATIPLDMEVEAHFLAKEDGIIAGIALAEMIFHEVDPSLKVEWSLKDGDHVHKG 65
GD+T P E EA + +E IAG A + +F +VDP + V W ++DG V
Sbjct: 27 GGDLTAQLIDP-QREAEARVITREHATIAGRAWVDEVFRQVDPRVLVTWQVEDGQRVEPN 85
Query: 66 LQFGKVSGRAHSIVIAERVVLNFMQRMSGIATLTRAMADL--AHPATILETRKTAPTLRL 123
++ G A +++ ER LNF+Q +SG AT ++ ADL +L+TRKT P LRL
Sbjct: 86 QMLFQLKGPARALLTGERSALNFLQLLSGTATRSQHYADLVAGTAVKLLDTRKTLPGLRL 145
Query: 124 LDKWAV 129
K+AV
Sbjct: 146 AQKYAV 151
>sp|P39666|NADC_BACSU Probable nicotinate-nucleotide pyrophosphorylase [carboxylating]
OS=Bacillus subtilis (strain 168) GN=nadC PE=1 SV=2
Length = 289
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 51/125 (40%), Positives = 75/125 (60%), Gaps = 3/125 (2%)
Query: 7 GDVTCMATIPLDMEVEAHFLAKEDGIIAGIALAEMIFHEVDPSLKVEWSLKDGDHVHKGL 66
GD+T +I + EA +AK +GI AG A+ + F +D +++ KDGD +HKG
Sbjct: 21 GDLTSQ-SIFGEQSCEAEIVAKSEGIFAGAAIIKEGFSLLDENVQSILHKKDGDMLHKGE 79
Query: 67 QFGKVSGRAHSIVIAERVVLNFMQRMSGIATLTRAMADLA--HPATILETRKTAPTLRLL 124
++ G A +++ ERVVLN +QR+SGIAT+TR I +TRKT P LR+L
Sbjct: 80 VIAELHGPAAALLSGERVVLNLIQRLSGIATMTREAVRCLDDEQIKICDTRKTTPGLRML 139
Query: 125 DKWAV 129
+K+AV
Sbjct: 140 EKYAV 144
>sp|P74301|NADC_SYNY3 Probable nicotinate-nucleotide pyrophosphorylase [carboxylating]
OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=nadC
PE=3 SV=1
Length = 295
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 70/111 (63%), Gaps = 6/111 (5%)
Query: 22 EAHFLAKEDGIIAGIALAEMIFHEVDPSLKVEWSLKDGDHVHKGLQFGKVSGRAHSIVIA 81
+A ++AKE+G+IAG+ +A IF +DPS++ + +G V ++G S++
Sbjct: 50 QARWVAKENGVIAGLPMAARIFQLLDPSMEFQVLAGEGQAVTASTVVATMAGNLGSLLTG 109
Query: 82 ERVVLNFMQRMSGIATLTR----AMADLAHPATILETRKTAPTLRLLDKWA 128
ERV LN + +SGIAT+TR A+AD +P ++TRKT P LR+L+K+A
Sbjct: 110 ERVALNLVMGLSGIATMTRQYVQAIAD--YPTRFVDTRKTTPGLRVLEKYA 158
>sp|O27860|NADC_METTH Probable nicotinate-nucleotide pyrophosphorylase [carboxylating]
OS=Methanothermobacter thermautotrophicus (strain ATCC
29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H)
GN=nadC PE=3 SV=1
Length = 279
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 71/126 (56%), Gaps = 6/126 (4%)
Query: 8 DVTCMATIPLDMEVEAHFLAKEDGIIAGIALAEMIFHEVDPSLKVEWSLKDGDHVHKGLQ 67
D+T A I V A +++E+G++AG+ +AEM+ E S+ + W DGD + G +
Sbjct: 17 DITTEALIDRGTRVVADIVSREEGVVAGVEVAEMMAREFSISI-IRWK-DDGDPLSGGER 74
Query: 68 FGKVSGRAHSIVIAERVVLNFMQRMSGIATLTRAMADLAHPAT----ILETRKTAPTLRL 123
+ G A I++ ER +LN M +MSGIATLTR+M A I TRKT P L+
Sbjct: 75 VLTLEGDAMDILMVERTMLNLMMKMSGIATLTRSMLQRARAVNEGIRIAATRKTTPGLQW 134
Query: 124 LDKWAV 129
+K AV
Sbjct: 135 FEKQAV 140
>sp|A7SG73|NADC_NEMVE Nicotinate-nucleotide pyrophosphorylase [carboxylating] (Fragment)
OS=Nematostella vectensis GN=qprt PE=3 SV=1
Length = 289
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 64/112 (57%), Gaps = 6/112 (5%)
Query: 22 EAHFLAKEDGIIAGIALAEMIFHEVDPSLKVEWSLKDGDHVHKGLQFGKVSGRAHSIVIA 81
+A L K DG++AG+ IF ++D KVEW +GD + G V+G + I++
Sbjct: 47 KAVLLCKSDGVLAGVPFFNAIFEKLD--CKVEWQNNEGDPIKAVSVIGTVTGPVNKILLG 104
Query: 82 ERVVLNFMQRMSGIATLTRAMADLAHP----ATILETRKTAPTLRLLDKWAV 129
ERV LN + R SGIAT +R++ +L I TRKT P R+++K+A+
Sbjct: 105 ERVALNCISRASGIATKSRSLTNLKEQYQWHGEIAGTRKTTPGFRVVEKYAL 156
>sp|P43619|NADC_YEAST Nicotinate-nucleotide pyrophosphorylase [carboxylating]
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=BNA6 PE=1 SV=1
Length = 295
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 69/118 (58%), Gaps = 12/118 (10%)
Query: 22 EAHFLAKEDGIIAGIALAEMIFHEVDPSLKVEWSLKDGDHVHKG------LQFGKVSGRA 75
EA+ K+DG++ G+ A+ +F++ + L+VEW K+G + + K++G A
Sbjct: 42 EANLYCKQDGMLCGVPFAQEVFNQCE--LQVEWLFKEGSFLEPSKNDSGKIVVAKITGPA 99
Query: 76 HSIVIAERVVLNFMQRMSGIATLTRAMADLA----HPATILETRKTAPTLRLLDKWAV 129
+I++AER LN + R SGIAT + + LA + TI TRKT P LR L+K+++
Sbjct: 100 KNILLAERTALNILSRSSGIATASHKIISLARSTGYKGTIAGTRKTTPGLRRLEKYSM 157
>sp|P46714|NADC_MYCLE Nicotinate-nucleotide pyrophosphorylase [carboxylating]
OS=Mycobacterium leprae (strain TN) GN=nadC PE=3 SV=1
Length = 284
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 68/126 (53%), Gaps = 4/126 (3%)
Query: 8 DVTCMATIPLDMEVEAHFLAKEDGIIAGIALAEMIFHEV--DPSLKVEWSLKDGDHVHKG 65
D+T AT+P V + +E G+IAG+ +A ++ EV +V + ++DG + G
Sbjct: 27 DITTQATVPAGTVVTGSMVPREPGVIAGVDVALLVLDEVFGVDGYRVLYRVEDGARLQSG 86
Query: 66 LQFGKVSGRAHSIVIAERVVLNFMQRMSGIATLTRAMADLAH--PATILETRKTAPTLRL 123
V A ++ AER +LN + MSGIAT+T A D A I +TRKT P LR
Sbjct: 87 QPLLTVQAAARGLLTAERTMLNLVCHMSGIATVTVAWVDAVRGTKAKIRDTRKTLPGLRA 146
Query: 124 LDKWAV 129
L K+AV
Sbjct: 147 LQKYAV 152
>sp|O28439|NADC_ARCFU Probable nicotinate-nucleotide pyrophosphorylase [carboxylating]
OS=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 /
DSM 4304 / JCM 9628 / NBRC 100126) GN=nadC PE=3 SV=1
Length = 258
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 75/127 (59%), Gaps = 10/127 (7%)
Query: 7 GDVTCMATIPLDMEVEAHFLAKEDGIIAGIALAEMIFHEVDPSLKVEWSLKDGDHVHKGL 66
GDVT + T +VEA ++K +G++AG+ + +++F + + V S KDG+ + G
Sbjct: 4 GDVTAIPT----KDVEAVIVSKGEGVLAGVGVVKILFDLAE--IVVMESKKDGEPIKPGD 57
Query: 67 QFGKVSGRAHSIVIAERVVLNFMQRMSGIATLTRAMADLA---HPATIL-ETRKTAPTLR 122
++ G++ SI+ ER+ +N + RMSGIAT T M + A +P ++ TRKT P R
Sbjct: 58 VVMRLRGKSDSILATERLAINILMRMSGIATATAKMVERARRVNPKVVVAATRKTTPGFR 117
Query: 123 LLDKWAV 129
+ +K AV
Sbjct: 118 IFEKMAV 124
>sp|O06594|NADC_MYCTU Nicotinate-nucleotide pyrophosphorylase [carboxylating]
OS=Mycobacterium tuberculosis GN=nadC PE=1 SV=1
Length = 285
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 67/126 (53%), Gaps = 4/126 (3%)
Query: 8 DVTCMATIPLDMEVEAHFLAKEDGIIAGIALAEMIFHEV--DPSLKVEWSLKDGDHVHKG 65
DVT +AT+P A + +E G++AG+ +A + +EV +V ++DG V G
Sbjct: 28 DVTTLATVPASATTTASLVTREAGVVAGLDVALLTLNEVLGTNGYRVLDRVEDGARVPPG 87
Query: 66 LQFGKVSGRAHSIVIAERVVLNFMQRMSGIATLTRAMADLAH--PATILETRKTAPTLRL 123
+ + ++ AER +LN + +SGIAT T A D A I +TRKT P LR
Sbjct: 88 EALMTLEAQTRGLLTAERTMLNLVGHLSGIATATAAWVDAVRGTKAKIRDTRKTLPGLRA 147
Query: 124 LDKWAV 129
L K+AV
Sbjct: 148 LQKYAV 153
>sp|P30012|NADC_SALTY Nicotinate-nucleotide pyrophosphorylase [carboxylating]
OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC
700720) GN=nadC PE=1 SV=3
Length = 297
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 66/128 (51%), Gaps = 3/128 (2%)
Query: 5 SAGDVTCMATIPLDMEVEAHFLAKEDGIIAGIALAEMIFHEV-DPSLKVEWSLKDGDHVH 63
AG+ +P D + A + +EDG+ G E +F ++ +++ W + DGD +H
Sbjct: 40 DAGNDITAQLLPADTQAHATVITREDGVFCGKRWVEEVFIQLAGDDVRLTWHVDDGDAIH 99
Query: 64 KGLQFGKVSGRAHSIVIAERVVLNFMQRMSGIATLTRAMADL--AHPATILETRKTAPTL 121
+++G A ++ ER LNF+Q +SG+A+ R L +L+TRKT P L
Sbjct: 100 ANQTVFELNGPARVLLTGERTALNFVQTLSGVASEVRRYVGLLAGTQTQLLDTRKTLPGL 159
Query: 122 RLLDKWAV 129
R K+AV
Sbjct: 160 RTALKYAV 167
>sp|Q3T063|NADC_BOVIN Nicotinate-nucleotide pyrophosphorylase [carboxylating] OS=Bos
taurus GN=QPRT PE=2 SV=1
Length = 299
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 60/112 (53%), Gaps = 6/112 (5%)
Query: 22 EAHFLAKEDGIIAGIALAEMIFHEVDPSLKVEWSLKDGDHVHKGLQFGKVSGRAHSIVIA 81
+A AK G++AG + IF +V+ +V W L +G + + +V G AH +++
Sbjct: 43 QAVLWAKSPGVLAGRPFLDAIFAQVN--CQVSWFLPEGSKLVPVAKVAEVRGPAHCLLLG 100
Query: 82 ERVVLNFMQRMSGIATLTRAMADLAH----PATILETRKTAPTLRLLDKWAV 129
ERV LN + R SG+A++ A + A + TRKT P RL++K+ +
Sbjct: 101 ERVALNTLARCSGVASMAAAAVETARGTGWAGHVAGTRKTTPGFRLVEKYGL 152
>sp|Q91X91|NADC_MOUSE Nicotinate-nucleotide pyrophosphorylase [carboxylating] OS=Mus
musculus GN=Qprt PE=2 SV=1
Length = 299
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 60/112 (53%), Gaps = 6/112 (5%)
Query: 22 EAHFLAKEDGIIAGIALAEMIFHEVDPSLKVEWSLKDGDHVHKGLQFGKVSGRAHSIVIA 81
+A AK G++AG + IF +++ +V W L +G + ++ +V G AH +++
Sbjct: 43 QAVLWAKSPGVLAGRPFFDAIFTQLN--CQVSWFLPEGSKLVPVVKVAEVKGPAHHLLLG 100
Query: 82 ERVVLNFMQRMSGIATLTRAMADLAHPAT----ILETRKTAPTLRLLDKWAV 129
ERV LN + R SGIA+ ++A + TRKT P RL++K+ +
Sbjct: 101 ERVALNTLARCSGIASAAATAVEVARSTGWTGHVAGTRKTTPGFRLVEKYGL 152
>sp|P30011|NADC_ECOLI Nicotinate-nucleotide pyrophosphorylase [carboxylating]
OS=Escherichia coli (strain K12) GN=nadC PE=3 SV=7
Length = 297
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 61/118 (51%), Gaps = 3/118 (2%)
Query: 15 IPLDMEVEAHFLAKEDGIIAGIALAEMIFHEV-DPSLKVEWSLKDGDHVHKGLQFGKVSG 73
+P + A + +E+G+ G E +F ++ + + W + DGD ++ ++ G
Sbjct: 50 LPENSRSHATVITRENGVFCGKRWVEEVFIQLAGDDVTIIWHVDDGDVINANQSLFELEG 109
Query: 74 RAHSIVIAERVVLNFMQRMSGIATLTRAMADLAHPAT--ILETRKTAPTLRLLDKWAV 129
+ ++ ER LNF+Q +SG+A+ R +L +L+TRKT P LR K+AV
Sbjct: 110 PSRVLLTGERTALNFVQTLSGVASKVRHYVELLEGTNTQLLDTRKTLPGLRSALKYAV 167
>sp|Q57916|NADC_METJA Probable nicotinate-nucleotide pyrophosphorylase [carboxylating]
OS=Methanocaldococcus jannaschii (strain ATCC 43067 /
DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=nadC PE=3
SV=1
Length = 283
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 62/128 (48%), Gaps = 10/128 (7%)
Query: 7 GDVTCMATIPLDMEVEAHFLAKEDGIIAGIALAEMIFHEVDPSLKVEWSLKDGDHVHKG- 65
GD+T + IP ++ + AKE I+ GI F E +K + DG+ +
Sbjct: 21 GDITTNSIIPEGVKAKGVIKAKEKCIVCGIDFIVAFFEEY--GIKCKKLFNDGEEAYGNI 78
Query: 66 LQFGKVSGRAHSIVIAERVVLNFMQRMSGIATLTRAMADLAHPAT----ILETRKTAPTL 121
L+F G A +I++ ER LN + +SGIAT+T + A + TRKT P L
Sbjct: 79 LEF---EGDARTILMLERTALNLLMHLSGIATMTNRIVKKAKSVNKNVRVACTRKTLPLL 135
Query: 122 RLLDKWAV 129
L K+AV
Sbjct: 136 SPLQKYAV 143
>sp|Q15274|NADC_HUMAN Nicotinate-nucleotide pyrophosphorylase [carboxylating] OS=Homo
sapiens GN=QPRT PE=1 SV=3
Length = 297
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 60/112 (53%), Gaps = 6/112 (5%)
Query: 22 EAHFLAKEDGIIAGIALAEMIFHEVDPSLKVEWSLKDGDHVHKGLQFGKVSGRAHSIVIA 81
+A AK G++AG + IF +++ +V W L +G + + +V G AH +++
Sbjct: 43 QAALWAKSPGVLAGQPFFDAIFTQLN--CQVSWFLPEGSKLVPVARVAEVRGPAHCLLLG 100
Query: 82 ERVVLNFMQRMSGIATLTRAMADLAHPAT----ILETRKTAPTLRLLDKWAV 129
ERV LN + R SGIA+ A + A A + TRKT P RL++K+ +
Sbjct: 101 ERVALNTLARCSGIASAAAAAVEAARGAGWTGHVAGTRKTTPGFRLVEKYGL 152
>sp|Q5I0M2|NADC_RAT Nicotinate-nucleotide pyrophosphorylase [carboxylating] OS=Rattus
norvegicus GN=Qprt PE=2 SV=1
Length = 299
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 60/112 (53%), Gaps = 6/112 (5%)
Query: 22 EAHFLAKEDGIIAGIALAEMIFHEVDPSLKVEWSLKDGDHVHKGLQFGKVSGRAHSIVIA 81
+A AK G++AG + IF +++ +V W L +G + ++ +V G AH +++
Sbjct: 43 QAVLWAKSPGVLAGRPFFDAIFTQLN--CQVSWLLPEGSKLVPVVKVAEVRGPAHHLLLG 100
Query: 82 ERVVLNFMQRMSGIATLTRAMADLAHPAT----ILETRKTAPTLRLLDKWAV 129
ERV LN + R SGIA+ ++A + TRKT P RL++K+ +
Sbjct: 101 ERVALNTLARCSGIASAAATAVEVATSTGWAGHVAGTRKTTPGFRLVEKYGL 152
>sp|Q75JX0|NADC_DICDI Nicotinate-nucleotide pyrophosphorylase [carboxylating]
OS=Dictyostelium discoideum GN=qprt PE=3 SV=1
Length = 300
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 58/126 (46%), Gaps = 21/126 (16%)
Query: 23 AHFLAKEDGIIAGIALAEMIFHEVDPSLKVEWSLKDGDHV--------HKGLQFGKVSGR 74
AH L K++G+ +G + IF+++ KV W +KDG+ +K V G
Sbjct: 41 AHLLGKQNGVFSGSIFFQEIFNQL--GCKVIWFIKDGESFSMTHGPEKNKPQVLAHVIGP 98
Query: 75 AHSIVIAERVVLNFMQRMSGIATLTRAMADLA---------HP--ATILETRKTAPTLRL 123
+I+I ER+ LN + R GI T + L P I TRKT P RL
Sbjct: 99 VRNILIGERLSLNILSRSCGITTQGYNVKKLVDGDNEQQQQQPWKGKIAGTRKTTPGFRL 158
Query: 124 LDKWAV 129
++K A+
Sbjct: 159 VEKLAL 164
>sp|O25909|NADC_HELPY Probable nicotinate-nucleotide pyrophosphorylase [carboxylating]
OS=Helicobacter pylori (strain ATCC 700392 / 26695)
GN=nadC PE=1 SV=1
Length = 273
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 61/118 (51%), Gaps = 12/118 (10%)
Query: 18 DMEVEAHFLAKEDGIIAG----IALAEMIFHEVDPSLKVEWSLKDGDHVHKGLQFGKVSG 73
D + A AK++G+ +G + L EM E ++K + K D + + + G
Sbjct: 28 DFKATAFVRAKQEGVFSGEKYALELLEMTGIECVQTIKDKERFKPKDALME------IRG 81
Query: 74 RAHSIVIAERVVLNFMQRMSGIATLTRAMADL--AHPATILETRKTAPTLRLLDKWAV 129
++ ER +LN +Q SGIATLT + +H +L+TRKT P LR+ +K++V
Sbjct: 82 DFSMLLKVERTLLNLLQHSSGIATLTSRFVEALNSHKVRLLDTRKTRPLLRIFEKYSV 139
>sp|Q9ZJN2|NADC_HELPJ Probable nicotinate-nucleotide pyrophosphorylase [carboxylating]
OS=Helicobacter pylori (strain J99) GN=nadC PE=3 SV=1
Length = 273
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 59/114 (51%), Gaps = 4/114 (3%)
Query: 18 DMEVEAHFLAKEDGIIAGIALAEMIFHEVDPSLKVEWSLKDGDHVHKGLQFGKVSGRAHS 77
D + A AK++G+ +G A + ++ ++KD + ++ G
Sbjct: 28 DFKATAFVRAKQEGVFSGEKYALELLQMT--GIECVQNIKDKERFKPKDTLMEIRGDFSM 85
Query: 78 IVIAERVVLNFMQRMSGIATLT-RAMADLAHPAT-ILETRKTAPTLRLLDKWAV 129
++ ER +LN +Q SGIATLT R + L P +L+TRKT P LR+ +K++V
Sbjct: 86 LLKIERTLLNLLQHSSGIATLTSRFVEALNSPKVRLLDTRKTRPLLRIFEKYSV 139
>sp|Q9CLU4|MODD_PASMU Putative pyrophosphorylase ModD OS=Pasteurella multocida (strain
Pm70) GN=modD PE=3 SV=1
Length = 282
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 61/127 (48%), Gaps = 6/127 (4%)
Query: 7 GDVTCMATIPLDMEVEAHFLAKEDGIIAGIALAEMIFHEVDPSLKVEWSLKDGDHVHKGL 66
GD+T A + E F K GI+AGI++AE + ++D +V +K+G+ V G
Sbjct: 20 GDLTTHALGLESIPAEICFKRKNAGIVAGISIAEKLLRKLDIHPQV--YVKEGEFVEAGS 77
Query: 67 QFGKVSGRAHSIVIAERVVLNFMQRMSGIATLTRAM---ADLAHPATILE-TRKTAPTLR 122
G A + A +VV ++ G+A T M A +PA ++ TRK+ P R
Sbjct: 78 LLLSAKGSADKLHQAWKVVQLVLEWSCGVAQYTAEMISNAKAINPAAVVACTRKSIPNTR 137
Query: 123 LLDKWAV 129
L AV
Sbjct: 138 KLATNAV 144
>sp|Q57278|MODD_HAEIN Putative pyrophosphorylase ModD OS=Haemophilus influenzae (strain
ATCC 51907 / DSM 11121 / KW20 / Rd) GN=modD PE=3 SV=1
Length = 281
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 59/124 (47%), Gaps = 10/124 (8%)
Query: 7 GDVTCMATIPLDMEVEAHFLAKEDGIIAGIALAEMIFHEVD--PSLKVEWSLKDGDHVHK 64
GD+T A ++ + F K G++AG+++AE + ++D P L V K+G+ V
Sbjct: 20 GDLTTHALSIENIPAKILFKRKNAGVVAGVSVAEKLLKKLDIQPHLYV----KEGEWVES 75
Query: 65 GLQFGKVSGRAHSIVIAERVVLNFMQRMSGIATLTRAM---ADLAHPATILE-TRKTAPT 120
G G + + A +VV ++ G+A T M A +P ++ TRK+ P
Sbjct: 76 GALLISAEGMSEQLHQAWKVVQLVLEWSCGVAQYTAEMIANAKSVNPTAVVACTRKSIPN 135
Query: 121 LRLL 124
R L
Sbjct: 136 TRKL 139
>sp|Q8CQK1|PURA_STAES Adenylosuccinate synthetase OS=Staphylococcus epidermidis (strain
ATCC 12228) GN=purA PE=3 SV=1
Length = 427
Score = 31.6 bits (70), Expect = 1.4, Method: Composition-based stats.
Identities = 22/93 (23%), Positives = 38/93 (40%), Gaps = 22/93 (23%)
Query: 57 KDGDHVHK-GLQFGKVSGRAHSIVIAERVVLNFMQRMSGIATLTRAMADL---------- 105
+DG H+ + G ++G +GR + + VVL +R+SGI L+ D+
Sbjct: 284 EDGHHIREVGREYGTTTGRPRRVGWFDSVVLRHSRRVSGITDLSINSIDVLTGLDTVKIC 343
Query: 106 -----------AHPATILETRKTAPTLRLLDKW 127
+PA + + R+ P L W
Sbjct: 344 TAYELDGEKITEYPANLDQLRRCKPIFEELPGW 376
>sp|Q5HK16|PURA_STAEQ Adenylosuccinate synthetase OS=Staphylococcus epidermidis (strain
ATCC 35984 / RP62A) GN=purA PE=3 SV=1
Length = 427
Score = 31.6 bits (70), Expect = 1.4, Method: Composition-based stats.
Identities = 22/93 (23%), Positives = 38/93 (40%), Gaps = 22/93 (23%)
Query: 57 KDGDHVHK-GLQFGKVSGRAHSIVIAERVVLNFMQRMSGIATLTRAMADL---------- 105
+DG H+ + G ++G +GR + + VVL +R+SGI L+ D+
Sbjct: 284 EDGHHIREVGREYGTTTGRPRRVGWFDSVVLRHSRRVSGITDLSINSIDVLTGLDTVKIC 343
Query: 106 -----------AHPATILETRKTAPTLRLLDKW 127
+PA + + R+ P L W
Sbjct: 344 TAYELDGEKITEYPANLDQLRRCKPIFEELPGW 376
>sp|Q44603|TRPC_BUCSC Tryptophan biosynthesis protein TrpCF OS=Buchnera aphidicola subsp.
Schlechtendalia chinensis GN=trpC PE=3 SV=1
Length = 461
Score = 31.2 bits (69), Expect = 2.1, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 14/57 (24%)
Query: 71 VSGRAHSIVIAERVVLNFMQRMSGIATLTRAMADLAHPATILETRKTAPTLRLLDKW 127
+S H+I +++R NF+Q + I HPA ILE +K +P+L +L+ +
Sbjct: 27 LSSFQHNITLSDR---NFIQALKNI-----------HPALILEFKKHSPSLGILNDF 69
>sp|Q24298|CADE_DROME DE-cadherin OS=Drosophila melanogaster GN=shg PE=1 SV=2
Length = 1507
Score = 31.2 bits (69), Expect = 2.2, Method: Composition-based stats.
Identities = 17/61 (27%), Positives = 35/61 (57%), Gaps = 3/61 (4%)
Query: 45 EVDPSLKVEWSLKDGDHVHKGLQFGKVSGRAHSIVIAERVVLNFMQRMSGIATLTRAMAD 104
E P +K ++S+ DGD++H +QF + + + + I I R+ + + R S ++ L + D
Sbjct: 774 EATPDIKTKFSM-DGDYLHANVQFDREAQKEYFIPI--RISDSGVPRQSAVSILHLVIGD 830
Query: 105 L 105
+
Sbjct: 831 V 831
>sp|Q8NYX6|PURA_STAAW Adenylosuccinate synthetase OS=Staphylococcus aureus (strain MW2)
GN=purA PE=3 SV=1
Length = 427
Score = 30.8 bits (68), Expect = 2.4, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 57 KDGDHVHK-GLQFGKVSGRAHSIVIAERVVLNFMQRMSGIATLT 99
+DG H+ + G ++G +GR + + VVL +R+SGI L+
Sbjct: 284 EDGHHIREVGREYGTTTGRPRRVGWFDSVVLRHSRRVSGITDLS 327
>sp|Q6GD73|PURA_STAAS Adenylosuccinate synthetase OS=Staphylococcus aureus (strain
MSSA476) GN=purA PE=3 SV=1
Length = 427
Score = 30.8 bits (68), Expect = 2.4, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 57 KDGDHVHK-GLQFGKVSGRAHSIVIAERVVLNFMQRMSGIATLT 99
+DG H+ + G ++G +GR + + VVL +R+SGI L+
Sbjct: 284 EDGHHIREVGREYGTTTGRPRRVGWFDSVVLRHSRRVSGITDLS 327
>sp|Q6GKS8|PURA_STAAR Adenylosuccinate synthetase OS=Staphylococcus aureus (strain
MRSA252) GN=purA PE=3 SV=1
Length = 427
Score = 30.8 bits (68), Expect = 2.4, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 57 KDGDHVHK-GLQFGKVSGRAHSIVIAERVVLNFMQRMSGIATLT 99
+DG H+ + G ++G +GR + + VVL +R+SGI L+
Sbjct: 284 EDGHHIREVGREYGTTTGRPRRVGWFDSVVLRHSRRVSGITDLS 327
>sp|P99099|PURA_STAAN Adenylosuccinate synthetase OS=Staphylococcus aureus (strain N315)
GN=purA PE=1 SV=1
Length = 427
Score = 30.8 bits (68), Expect = 2.4, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 57 KDGDHVHK-GLQFGKVSGRAHSIVIAERVVLNFMQRMSGIATLT 99
+DG H+ + G ++G +GR + + VVL +R+SGI L+
Sbjct: 284 EDGHHIREVGREYGTTTGRPRRVGWFDSVVLRHSRRVSGITDLS 327
>sp|P65884|PURA_STAAM Adenylosuccinate synthetase OS=Staphylococcus aureus (strain Mu50 /
ATCC 700699) GN=purA PE=1 SV=1
Length = 427
Score = 30.8 bits (68), Expect = 2.4, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 57 KDGDHVHK-GLQFGKVSGRAHSIVIAERVVLNFMQRMSGIATLT 99
+DG H+ + G ++G +GR + + VVL +R+SGI L+
Sbjct: 284 EDGHHIREVGREYGTTTGRPRRVGWFDSVVLRHSRRVSGITDLS 327
>sp|Q5HJX8|PURA_STAAC Adenylosuccinate synthetase OS=Staphylococcus aureus (strain COL)
GN=purA PE=3 SV=1
Length = 427
Score = 30.8 bits (68), Expect = 2.4, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 57 KDGDHVHK-GLQFGKVSGRAHSIVIAERVVLNFMQRMSGIATLT 99
+DG H+ + G ++G +GR + + VVL +R+SGI L+
Sbjct: 284 EDGHHIREVGREYGTTTGRPRRVGWFDSVVLRHSRRVSGITDLS 327
>sp|C0ZA40|PURA_BREBN Adenylosuccinate synthetase OS=Brevibacillus brevis (strain 47 /
JCM 6285 / NBRC 100599) GN=purA PE=3 SV=1
Length = 428
Score = 30.8 bits (68), Expect = 2.9, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 10/66 (15%)
Query: 59 GDHVHK-GLQFGKVSGRAHSIVIAERVVLNFMQRMSGIATLTRAMADLAHPATILETRKT 117
GDH+ + G ++G +GR + + VV+ +R+SGI L T L+T
Sbjct: 286 GDHIREVGFEYGTTTGRPRRVGWFDSVVVRHARRVSGITGLA---------ITKLDTLSG 336
Query: 118 APTLRL 123
TLR+
Sbjct: 337 IETLRI 342
>sp|A8MH14|AROC_ALKOO Chorismate synthase OS=Alkaliphilus oremlandii (strain OhILAs)
GN=aroC PE=3 SV=1
Length = 384
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 2/77 (2%)
Query: 2 CGTSAGDV--TCMATIPLDMEVEAHFLAKEDGIIAGIALAEMIFHEVDPSLKVEWSLKDG 59
G S G V + +P+ + AHF K DGI+A ++ V+ +E S K G
Sbjct: 206 TGDSLGGVFEVIVRNVPIGIGSYAHFDRKLDGILAQGLMSLQAIKAVEIGNGIEGSSKMG 265
Query: 60 DHVHKGLQFGKVSGRAH 76
H +++ + G H
Sbjct: 266 SQFHDEIKYSEAKGYYH 282
>sp|Q4A164|PURA_STAS1 Adenylosuccinate synthetase OS=Staphylococcus saprophyticus subsp.
saprophyticus (strain ATCC 15305 / DSM 20229) GN=purA
PE=3 SV=1
Length = 427
Score = 30.0 bits (66), Expect = 3.9, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 57 KDGDHVHK-GLQFGKVSGRAHSIVIAERVVLNFMQRMSGIATLT 99
+DG H+ + G ++G +GR + + VVL +R SGI L+
Sbjct: 284 EDGHHIREVGREYGTTTGRPRRVGWFDSVVLRHSRRASGITDLS 327
>sp|B2A449|PURA_NATTJ Adenylosuccinate synthetase OS=Natranaerobius thermophilus (strain
ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN=purA PE=3
SV=1
Length = 429
Score = 30.0 bits (66), Expect = 3.9, Method: Composition-based stats.
Identities = 13/48 (27%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 59 GDHV-HKGLQFGKVSGRAHSIVIAERVVLNFMQRMSGIATLTRAMADL 105
GD + KG ++G +GR + + V+LN+ +R++G + + D+
Sbjct: 286 GDQIREKGKEYGTTTGRPRRVGWLDTVILNYSRRINGFNHIALTLLDV 333
>sp|Q5CZC0|FSIP2_HUMAN Fibrous sheath-interacting protein 2 OS=Homo sapiens GN=FSIP2 PE=2
SV=4
Length = 6907
Score = 30.0 bits (66), Expect = 4.3, Method: Composition-based stats.
Identities = 21/81 (25%), Positives = 40/81 (49%), Gaps = 10/81 (12%)
Query: 25 FLAKEDGIIAGIALAEMIFHEVDPSLKVEWS----LKDGDHVHKGLQFGKVSGRA--HSI 78
FL+K +AG + E+++H + P L E S L D DHV + + GK + +S
Sbjct: 5219 FLSK----LAGFIMKEIMYHHLQPFLHGEESSFSDLSDYDHVSELAKSGKEKTQPSLYSA 5274
Query: 79 VIAERVVLNFMQRMSGIATLT 99
E ++++ + + + +T
Sbjct: 5275 TFLEDIIIDLVHKFCSLLIIT 5295
>sp|B2G550|PURA_LACRJ Adenylosuccinate synthetase OS=Lactobacillus reuteri (strain JCM
1112) GN=purA PE=3 SV=1
Length = 432
Score = 30.0 bits (66), Expect = 4.5, Method: Composition-based stats.
Identities = 19/66 (28%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Query: 59 GDHVHK-GLQFGKVSGRAHSIVIAERVVLNFMQRMSGIATLTRAMADLAHPATILETRKT 117
GD + + G ++G V+GR + + V + +R+SGI+ L+ + D+ T L+T K
Sbjct: 286 GDQIRETGHEYGTVTGRPRRVGWFDSVAMRHARRVSGISCLSLNLLDV---LTGLKTVKI 342
Query: 118 APTLRL 123
+ +L
Sbjct: 343 CTSYKL 348
>sp|A5VHM0|PURA_LACRD Adenylosuccinate synthetase OS=Lactobacillus reuteri (strain DSM
20016) GN=purA PE=3 SV=1
Length = 432
Score = 30.0 bits (66), Expect = 4.5, Method: Composition-based stats.
Identities = 19/66 (28%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Query: 59 GDHVHK-GLQFGKVSGRAHSIVIAERVVLNFMQRMSGIATLTRAMADLAHPATILETRKT 117
GD + + G ++G V+GR + + V + +R+SGI+ L+ + D+ T L+T K
Sbjct: 286 GDQIRETGHEYGTVTGRPRRVGWFDSVAMRHARRVSGISCLSLNLLDV---LTGLKTVKI 342
Query: 118 APTLRL 123
+ +L
Sbjct: 343 CTSYKL 348
>sp|Q839G9|EFG_ENTFA Elongation factor G OS=Enterococcus faecalis (strain ATCC 700802 /
V583) GN=fusA PE=3 SV=1
Length = 693
Score = 30.0 bits (66), Expect = 4.9, Method: Composition-based stats.
Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 22/97 (22%)
Query: 4 TSAGDVTCMATIPLDME------------VEAHFLAKEDGIIAGIALAEMIFHEVDPSLK 51
T+ GD C P+ +E VE A +D + G+AL ++ E DPS +
Sbjct: 382 TTTGDTLCALDAPVILESIEFPDPVIQVAVEPKSKADQDKM--GVALQKLA--EEDPSFR 437
Query: 52 VEWSLKDGDHVHKGLQFGKVSGRAHSIVIAERVVLNF 88
VE +++ G+ V G+ G H V+ +R+ F
Sbjct: 438 VETNVETGETVISGM------GELHLDVLVDRMKREF 468
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.134 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,372,377
Number of Sequences: 539616
Number of extensions: 1673926
Number of successful extensions: 4483
Number of sequences better than 100.0: 47
Number of HSP's better than 100.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 4431
Number of HSP's gapped (non-prelim): 47
length of query: 129
length of database: 191,569,459
effective HSP length: 95
effective length of query: 34
effective length of database: 140,305,939
effective search space: 4770401926
effective search space used: 4770401926
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 55 (25.8 bits)