Query 033028
Match_columns 129
No_of_seqs 105 out of 238
Neff 4.9
Searched_HMMs 13730
Date Mon Mar 25 14:30:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033028.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/033028hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1bh9a_ a.22.1.3 (A:) TAF(II)1 99.9 2.9E-22 2.1E-26 123.1 6.3 45 31-75 1-45 (45)
2 d1htaa_ a.22.1.2 (A:) Archaeal 97.2 0.0008 5.8E-08 41.7 7.7 58 35-93 8-67 (68)
3 d1ku5a_ a.22.1.2 (A:) Archaeal 97.2 0.00047 3.4E-08 42.7 6.4 58 35-93 7-66 (66)
4 d1n1jb_ a.22.1.3 (B:) Nuclear 96.9 0.0021 1.5E-07 40.7 7.1 60 36-95 6-67 (78)
5 d2huec1 a.22.1.1 (C:20-101) Hi 96.8 0.0016 1.2E-07 42.3 6.4 64 30-94 9-74 (82)
6 d1h3ob_ a.22.1.3 (B:) TAF(II)- 96.6 0.0044 3.2E-07 39.9 7.0 59 36-94 9-69 (74)
7 d1f1ea_ a.22.1.2 (A:) Archaeal 95.7 0.011 8.2E-07 41.8 6.3 65 30-95 78-145 (151)
8 d1jfib_ a.22.1.3 (B:) Negative 95.5 0.11 7.9E-06 35.9 10.6 72 34-105 8-83 (135)
9 d1n1ja_ a.22.1.3 (A:) Nuclear 95.4 0.024 1.8E-06 36.4 6.6 61 35-95 7-70 (87)
10 d1tzyc_ a.22.1.1 (C:) Histone 95.1 0.027 2E-06 37.5 6.2 65 28-92 23-89 (95)
11 d2bykb1 a.22.1.3 (B:11-99) Chr 95.0 0.074 5.4E-06 34.1 8.0 59 36-94 5-66 (89)
12 d1jfia_ a.22.1.3 (A:) Negative 94.6 0.054 4E-06 33.0 6.1 56 35-90 7-64 (66)
13 d1f1ea_ a.22.1.2 (A:) Archaeal 89.5 0.46 3.3E-05 33.0 6.3 57 36-93 7-66 (151)
14 d1tafa_ a.22.1.3 (A:) TAF(II)4 88.2 1.2 9E-05 27.5 7.0 56 36-92 7-64 (68)
15 d1tafb_ a.22.1.3 (B:) TAF(II)6 82.6 2.3 0.00017 26.4 6.3 46 47-92 22-69 (70)
16 d2byka1 a.22.1.3 (A:29-100) Ch 82.6 2.9 0.00021 25.4 6.8 52 44-95 5-59 (72)
17 d1q9ca_ a.22.1.3 (A:) Histone 74.3 3.3 0.00024 29.5 5.8 49 48-96 116-166 (172)
18 d1f66c_ a.22.1.1 (C:) Histone 61.5 5 0.00036 26.2 4.1 39 57-96 42-80 (103)
19 d1a9xa1 a.92.1.1 (A:403-555) C 60.0 10 0.00073 25.9 5.8 36 77-113 41-76 (153)
20 d1fnna2 c.37.1.20 (A:1-276) CD 56.5 24 0.0017 23.4 7.6 43 50-92 215-271 (276)
21 d1wh7a_ a.4.1.1 (A:) ZF-HD hom 53.1 12 0.00086 22.7 4.7 33 23-55 15-52 (80)
22 d1u35c1 a.22.1.1 (C:814-919) m 52.6 12 0.00088 24.4 4.9 39 57-96 41-79 (106)
23 d1tzya_ a.22.1.1 (A:) Histone 52.0 13 0.00092 24.3 5.0 39 57-96 42-80 (106)
24 d1tzyb_ a.22.1.1 (B:) Histone 47.9 29 0.0021 21.9 7.2 44 49-92 22-67 (92)
25 d1pufa_ a.4.1.1 (A:) Homeobox 46.2 19 0.0014 21.7 4.9 32 26-57 14-46 (77)
26 d1x2na1 a.4.1.1 (A:6-67) Homeo 42.9 17 0.0012 21.0 4.0 32 26-57 3-38 (62)
27 d1w5sa2 c.37.1.20 (A:7-293) CD 40.7 45 0.0033 22.0 7.8 44 50-93 232-286 (287)
28 d2f6ma1 a.2.17.1 (A:322-385) V 39.9 27 0.002 20.8 4.7 39 55-93 6-44 (64)
29 d1rp3a3 a.177.1.1 (A:0-86) Sig 34.7 41 0.003 20.3 5.1 59 48-107 4-72 (87)
30 d1b72a_ a.4.1.1 (A:) Homeobox 34.2 30 0.0022 21.3 4.5 32 25-56 27-59 (88)
31 d1ku3a_ a.4.13.2 (A:) Sigma70 33.2 29 0.0021 19.9 4.0 41 33-74 13-54 (61)
32 d1k6ka_ a.174.1.1 (A:) N-termi 31.3 27 0.002 21.8 4.0 32 65-96 84-117 (142)
33 d1khya_ a.174.1.1 (A:) N-termi 30.4 21 0.0015 22.3 3.2 34 63-96 5-40 (139)
34 d1upka_ a.118.1.15 (A:) Mo25 p 29.9 21 0.0015 27.6 3.7 36 32-68 37-73 (330)
35 d2a6sa1 d.298.1.1 (A:1-83) Tox 29.8 23 0.0016 21.9 3.2 23 84-106 10-32 (83)
36 d1q9ca_ a.22.1.3 (A:) Histone 28.7 85 0.0062 21.6 6.7 44 26-69 12-55 (172)
37 d2o4ta1 a.69.4.1 (A:16-105) Un 28.1 39 0.0029 21.0 4.2 30 31-62 14-43 (90)
38 d2o3la1 a.69.4.1 (A:14-95) Hyp 28.0 39 0.0029 20.6 4.2 30 31-62 18-47 (82)
39 d1ixza_ c.37.1.20 (A:) AAA dom 27.0 22 0.0016 25.2 3.2 34 58-91 211-246 (247)
40 d1c7va_ a.39.1.5 (A:) Calcium 26.1 29 0.0021 19.5 3.1 47 33-93 21-67 (68)
41 d1fi5a_ a.39.1.5 (A:) Troponin 25.7 34 0.0025 19.8 3.4 46 33-93 34-79 (81)
42 d1k6ka_ a.174.1.1 (A:) N-termi 23.8 42 0.0031 20.8 3.9 34 63-96 4-39 (142)
43 d1k94a_ a.39.1.8 (A:) Grancalc 22.9 91 0.0066 20.2 5.7 15 33-47 18-32 (165)
44 d1s5qb_ a.59.1.1 (B:) Sin3A {M 22.4 79 0.0057 19.0 5.2 37 90-126 23-80 (89)
45 d2o7ta2 a.121.1.1 (A:79-188) T 22.0 85 0.0062 19.5 5.1 40 52-91 36-75 (110)
46 d2p7vb1 a.4.13.2 (B:546-613) S 22.0 59 0.0043 18.9 4.0 40 34-74 11-51 (68)
47 d1xo5a_ a.39.1.5 (A:) Calcium- 21.6 35 0.0026 22.5 3.2 19 78-96 153-171 (180)
48 d1wg8a1 a.60.13.1 (A:109-206) 20.8 25 0.0018 22.2 2.1 20 33-52 31-50 (98)
49 d2opoa1 a.39.1.10 (A:6-86) Pol 20.4 76 0.0055 18.1 5.7 48 33-96 25-72 (81)
No 1
>d1bh9a_ a.22.1.3 (A:) TAF(II)18 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.86 E-value=2.9e-22 Score=123.12 Aligned_cols=45 Identities=53% Similarity=1.053 Sum_probs=43.4
Q ss_pred ccHHHHHHHHhhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHh
Q 033028 31 VFQKDLQHMMYGFGDDPNPLPETVALVEDIVVEYVTDLAHKAQDI 75 (129)
Q Consensus 31 ~f~~EI~~mMy~fGD~~~P~~ETv~l~EeIv~~~I~~l~~~A~~~ 75 (129)
+|++||++|||||||+++|++||+++|||||++||+++|++|+++
T Consensus 1 lF~~ei~~mMy~~GD~~~P~~ETv~llEdiv~~~i~~~~~~A~~v 45 (45)
T d1bh9a_ 1 LFSKELRCMMYGFGDDQNPYTESVDILEDLVIEFITEMTHKAMSI 45 (45)
T ss_dssp CCHHHHHHHHHHTTSCSSCCHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CcHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 699999999999999999999999999999999999999999874
No 2
>d1htaa_ a.22.1.2 (A:) Archaeal histone {Archaeon Methanothermus fervidus, histone A [TaxId: 2180]}
Probab=97.25 E-value=0.0008 Score=41.71 Aligned_cols=58 Identities=12% Similarity=0.217 Sum_probs=49.5
Q ss_pred HHHHHHhhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC--CCchhHHHHHHhh
Q 033028 35 DLQHMMYGFGDDPNPLPETVALVEDIVVEYVTDLAHKAQDIGSKGG--KLSVEDFLYLIRK 93 (129)
Q Consensus 35 EI~~mMy~fGD~~~P~~ETv~l~EeIv~~~I~~l~~~A~~~A~~Rg--kis~eDl~F~lR~ 93 (129)
-|+.+|-..|+ ..-..|...+|-+.+..||.+|+..|..++...| .|+.+|+..+||+
T Consensus 8 ~I~ri~k~~~~-~ris~ea~~~l~~~~e~fi~~l~~~a~~~a~~~kRkTi~~~DV~~Alk~ 67 (68)
T d1htaa_ 8 PIGRIIKNAGA-ERVSDDARIALAKVLEEMGEEIASEAVKLAKHAGRKTIKAEDIELARKM 67 (68)
T ss_dssp HHHHHHHHTTC-SCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCHHHHHHHHHT
T ss_pred HHHHHHHHCCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCHHHHHHHHHh
Confidence 36667766676 4689999999999999999999999999997544 4999999999985
No 3
>d1ku5a_ a.22.1.2 (A:) Archaeal histone {Archaeon (Pyrococcus horikoshii) [TaxId: 53953]}
Probab=97.23 E-value=0.00047 Score=42.72 Aligned_cols=58 Identities=19% Similarity=0.410 Sum_probs=51.1
Q ss_pred HHHHHHhhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCC--CchhHHHHHHhh
Q 033028 35 DLQHMMYGFGDDPNPLPETVALVEDIVVEYVTDLAHKAQDIGSKGGK--LSVEDFLYLIRK 93 (129)
Q Consensus 35 EI~~mMy~fGD~~~P~~ETv~l~EeIv~~~I~~l~~~A~~~A~~Rgk--is~eDl~F~lR~ 93 (129)
=|+.+|-..|+. .-..|+..+|-+....||.+|+..|..+|...|+ |+.+||..+|++
T Consensus 7 ~I~rI~k~~~~~-ris~ea~~~l~~a~e~Fi~~l~~~a~~~a~~~~RKTI~~~Dv~~Al~s 66 (66)
T d1ku5a_ 7 PVDRLIRKAGAE-RVSEQAAKVLAEYLEEYAIEIAKKAVEFARHAGRKTVKVEDIKLAIKS 66 (66)
T ss_dssp HHHHHHHHTTCS-EECHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCSEECHHHHHHHHTC
T ss_pred HHHHHHHhCccc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCHHHHHHHHhC
Confidence 467788888885 6889999999999999999999999999987665 999999999874
No 4
>d1n1jb_ a.22.1.3 (B:) Nuclear transcription factor Y subunit gamma (Nf-Yc2) {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.87 E-value=0.0021 Score=40.74 Aligned_cols=60 Identities=18% Similarity=0.088 Sum_probs=54.7
Q ss_pred HHHHHhhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCC--CchhHHHHHHhhCh
Q 033028 36 LQHMMYGFGDDPNPLPETVALVEDIVVEYVTDLAHKAQDIGSKGGK--LSVEDFLYLIRKDL 95 (129)
Q Consensus 36 I~~mMy~fGD~~~P~~ETv~l~EeIv~~~I~~l~~~A~~~A~~Rgk--is~eDl~F~lR~D~ 95 (129)
|+.+|-.-+|+.....|+..+|-.....||..|+..|...|...++ |+.+||.-++++++
T Consensus 6 VkrImK~~~~~~~is~ea~~~i~~a~E~Fi~~l~~~A~~~a~~~~rkti~~~dl~~av~~~~ 67 (78)
T d1n1jb_ 6 IKKIMKLDEDVKMISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAITKFD 67 (78)
T ss_dssp HHHHHTTSTTCCCBCTHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHHTTCG
T ss_pred HHHHHhcCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCHHHHHHHHhcCC
Confidence 7788888889999999999999999999999999999999976554 99999999999885
No 5
>d2huec1 a.22.1.1 (C:20-101) Histone H4 {African clawed frog (Xenopus laevis) [TaxId: 8355]}
Probab=96.82 E-value=0.0016 Score=42.34 Aligned_cols=64 Identities=8% Similarity=0.173 Sum_probs=53.9
Q ss_pred cccHHHHHHHHhhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhhcC--CCCchhHHHHHHhhC
Q 033028 30 GVFQKDLQHMMYGFGDDPNPLPETVALVEDIVVEYVTDLAHKAQDIGSKG--GKLSVEDFLYLIRKD 94 (129)
Q Consensus 30 ~~f~~EI~~mMy~fGD~~~P~~ETv~l~EeIv~~~I~~l~~~A~~~A~~R--gkis~eDl~F~lR~D 94 (129)
+....-|+.|+--.|= ..-..+....+.+++.+|+.++++.|...+... ..++.+|+.++||+.
T Consensus 9 gI~k~~i~Riar~~Gv-~ris~d~~~~l~~~l~~~l~~i~~~a~~~~~hakRKTvt~~DV~~Alkr~ 74 (82)
T d2huec1 9 GITKPAIRRLARRGGV-KRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQ 74 (82)
T ss_dssp SSCHHHHHHHHHHTTC-CEECTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHTTTT
T ss_pred CcCHHHHHHHHHHcCc-ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCHHHHHHHHHhc
Confidence 4556678888887665 678889999999999999999999999998654 449999999999975
No 6
>d1h3ob_ a.22.1.3 (B:) TAF(II)-20, (TAF(II)-15, hTAF12), histone fold domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.58 E-value=0.0044 Score=39.94 Aligned_cols=59 Identities=12% Similarity=0.232 Sum_probs=45.3
Q ss_pred HHHHHhhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCC--CchhHHHHHHhhC
Q 033028 36 LQHMMYGFGDDPNPLPETVALVEDIVVEYVTDLAHKAQDIGSKGGK--LSVEDFLYLIRKD 94 (129)
Q Consensus 36 I~~mMy~fGD~~~P~~ETv~l~EeIv~~~I~~l~~~A~~~A~~Rgk--is~eDl~F~lR~D 94 (129)
|+.|+--..-...-.++.-.++-+|.-+||-+++..|+++|..||. +.+.|+.|.|.++
T Consensus 9 L~eLv~~idp~~~ld~~vee~ll~iADdFV~~V~~~ac~lAKhR~s~~le~kDvql~LeR~ 69 (74)
T d1h3ob_ 9 LQDLVREVDPNEQLDEDVEEMLLQIADDFIESVVTAACQLARHRKSSTLEVKDVQLHLERQ 69 (74)
T ss_dssp HHHHHHHHCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEECHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHhh
Confidence 3333333333334455666699999999999999999999998885 8999999999764
No 7
>d1f1ea_ a.22.1.2 (A:) Archaeal histone {Archaeon Methanopyrus kandleri [TaxId: 2320]}
Probab=95.74 E-value=0.011 Score=41.77 Aligned_cols=65 Identities=17% Similarity=0.316 Sum_probs=54.9
Q ss_pred ccc-HHHHHHHHhhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCC--CchhHHHHHHhhCh
Q 033028 30 GVF-QKDLQHMMYGFGDDPNPLPETVALVEDIVVEYVTDLAHKAQDIGSKGGK--LSVEDFLYLIRKDL 95 (129)
Q Consensus 30 ~~f-~~EI~~mMy~fGD~~~P~~ETv~l~EeIv~~~I~~l~~~A~~~A~~Rgk--is~eDl~F~lR~D~ 95 (129)
.+| ..-|+.+|--.| ...-..|++.+|-+.+-.|+.+|+..|..+|...++ |+.+||..+|++--
T Consensus 78 ~~fp~a~IkRi~k~~g-~~ris~dA~~~l~~~~E~fi~~l~~~A~~~a~~~kRkTI~~~DI~~Av~~~~ 145 (151)
T d1f1ea_ 78 ELFGRATVRRILKRAG-IERASSDAVDLYNKLICRATEELGEKAAEYADEDGRKTVQGEDVEKAITYSM 145 (151)
T ss_dssp CCCCHHHHHHHHHHTT-CCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHHHHHS
T ss_pred CccCHHHHHHHHHcCC-cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCHHHHHHHHHHcC
Confidence 355 457888888666 467899999999999999999999999999976554 99999999998753
No 8
>d1jfib_ a.22.1.3 (B:) Negative cofactor 2, NC2, beta chain {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.46 E-value=0.11 Score=35.87 Aligned_cols=72 Identities=15% Similarity=0.200 Sum_probs=58.1
Q ss_pred HHHHHHHhhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC--CCchhHHHHHHhhC--hhhHhHHHHHH
Q 033028 34 KDLQHMMYGFGDDPNPLPETVALVEDIVVEYVTDLAHKAQDIGSKGG--KLSVEDFLYLIRKD--LPKLNRCTELL 105 (129)
Q Consensus 34 ~EI~~mMy~fGD~~~P~~ETv~l~EeIv~~~I~~l~~~A~~~A~~Rg--kis~eDl~F~lR~D--~~Kl~Rl~~lL 105 (129)
.=|..||-.-.|+.....|++.+|-.-...||..|+..|..+|...+ .|+.+||+-+|.+- ..-+..|..+|
T Consensus 8 a~I~kI~K~~~~~~~is~dA~~~i~~a~~~Fi~~lt~~A~~~a~~~~RkTi~~~Dv~~Al~~~~f~~f~~~l~~~l 83 (135)
T d1jfib_ 8 AAINKMIKETLPNVRVANDARELVVNCCTEFIHLISSEANEICNKSEKKTISPEHVIQALESLGFGSYISEVKEVL 83 (135)
T ss_dssp HHHHHHHHHHSTTCCBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSBCHHHHHHHHHHHTTGGGHHHHHHHH
T ss_pred HHHHHHHhhCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccHHHHHHHHHHcCcHHHHHHHHHHH
Confidence 34777888778888999999999999999999999999999997544 49999999999962 34444444443
No 9
>d1n1ja_ a.22.1.3 (A:) Nuclear transcription factor Y subunit beta (Nf-Yb3) {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.44 E-value=0.024 Score=36.38 Aligned_cols=61 Identities=13% Similarity=0.229 Sum_probs=52.5
Q ss_pred HHHHHHhh-hCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCC--CchhHHHHHHhhCh
Q 033028 35 DLQHMMYG-FGDDPNPLPETVALVEDIVVEYVTDLAHKAQDIGSKGGK--LSVEDFLYLIRKDL 95 (129)
Q Consensus 35 EI~~mMy~-fGD~~~P~~ETv~l~EeIv~~~I~~l~~~A~~~A~~Rgk--is~eDl~F~lR~D~ 95 (129)
=|+.+|-. ..|+..-..|++.+|-.....||..|+..|..+|...|+ |+.+|+.-++.+..
T Consensus 7 ~v~ri~K~~~p~~~~is~ea~~~i~~a~e~Fi~~lt~~A~~~a~~~~rKTI~~~dv~~Al~~~~ 70 (87)
T d1n1ja_ 7 NVARIMKNAIPQTGKIAKDAKECVQECVSEFISFITSEASERCHQEKRKTINGEDILFAMSTLG 70 (87)
T ss_dssp HHHHHHHHTSCTTCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSBCHHHHHHHHHHTT
T ss_pred HHHHHHHHhCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHcC
Confidence 46777864 467788899999999999999999999999999976554 99999999999864
No 10
>d1tzyc_ a.22.1.1 (C:) Histone H3 {Chicken (Gallus gallus), erythrocytes [TaxId: 9031]}
Probab=95.12 E-value=0.027 Score=37.47 Aligned_cols=65 Identities=14% Similarity=0.186 Sum_probs=57.2
Q ss_pred cccccHHHHHHHHhhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCC--CchhHHHHHHh
Q 033028 28 KRGVFQKDLQHMMYGFGDDPNPLPETVALVEDIVVEYVTDLAHKAQDIGSKGGK--LSVEDFLYLIR 92 (129)
Q Consensus 28 kk~~f~~EI~~mMy~fGD~~~P~~ETv~l~EeIv~~~I~~l~~~A~~~A~~Rgk--is~eDl~F~lR 92 (129)
.|-.|..=|+.++-.|.+.-.=.++....+.+.+-.|+++++..|..+|..+++ |...|+.++.|
T Consensus 23 pk~pF~RLVRei~~~~~~~~r~~~~Al~aLQea~E~yLv~lfeda~~~a~HakRvTl~~kD~~Larr 89 (95)
T d1tzyc_ 23 RKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARR 89 (95)
T ss_dssp CHHHHHHHHHHHHHHHCTTCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHHH
T ss_pred ccccHHHHHHHHHHhcCCCCEeeHHHHHHHHHHHHHHHHHHHHHhHHHHHhcCCCcCCHHHHHHHHH
Confidence 356788889999988888777889999999999999999999999999987776 88999998865
No 11
>d2bykb1 a.22.1.3 (B:11-99) Chrac-14 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=95.02 E-value=0.074 Score=34.13 Aligned_cols=59 Identities=8% Similarity=0.165 Sum_probs=50.1
Q ss_pred HHHHHhh-hCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC--CCchhHHHHHHhhC
Q 033028 36 LQHMMYG-FGDDPNPLPETVALVEDIVVEYVTDLAHKAQDIGSKGG--KLSVEDFLYLIRKD 94 (129)
Q Consensus 36 I~~mMy~-fGD~~~P~~ETv~l~EeIv~~~I~~l~~~A~~~A~~Rg--kis~eDl~F~lR~D 94 (129)
|+.+|-. -.|...-..|++.+|-.....||..|+..|..+|...+ .|+.+||+-+|..-
T Consensus 5 i~ri~K~~~p~~~~iskeA~~~i~~aae~FI~~lt~~A~~~a~~~~rKtI~~~dv~~Al~~~ 66 (89)
T d2bykb1 5 IGRLIKEALPESASVSKEARAAIARAASVFAIFVTSSSTALAHKQNHKTITAKDILQTLTEL 66 (89)
T ss_dssp HHHHHHHHSCTTCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCHHHHHHHHHHT
T ss_pred HHHHHHHhCcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccCHHHHHHHHHHC
Confidence 5667764 35778889999999999999999999999999987544 49999999999853
No 12
>d1jfia_ a.22.1.3 (A:) Negative cofactor 2, NC2, alpha chain {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.57 E-value=0.054 Score=32.96 Aligned_cols=56 Identities=7% Similarity=0.096 Sum_probs=48.5
Q ss_pred HHHHHHhhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhhcC--CCCchhHHHHH
Q 033028 35 DLQHMMYGFGDDPNPLPETVALVEDIVVEYVTDLAHKAQDIGSKG--GKLSVEDFLYL 90 (129)
Q Consensus 35 EI~~mMy~fGD~~~P~~ETv~l~EeIv~~~I~~l~~~A~~~A~~R--gkis~eDl~F~ 90 (129)
=|+.+|-.-.|+..-..|+..+|-..+-.||.+|+..|.+.|... ..|+.+||.=+
T Consensus 7 rVkkimk~~~~~~~is~~A~~~~~~a~E~Fi~~l~~~A~~~a~~~krktI~~~dl~~a 64 (66)
T d1jfia_ 7 RIKKIMQTDEEIGKVAAAVPVIISRALELFLESLLKKACQVTQSRNAKTMTTSHLKQC 64 (66)
T ss_dssp HHHHHHTTSTTCCCBCTTHHHHHHHHHHHHHHHHHHHHHHHHHTC---CBCHHHHHTT
T ss_pred HHHHHHhcCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCHHHHHHH
Confidence 478888888999999999999999999999999999999998653 45999998643
No 13
>d1f1ea_ a.22.1.2 (A:) Archaeal histone {Archaeon Methanopyrus kandleri [TaxId: 2320]}
Probab=89.48 E-value=0.46 Score=33.01 Aligned_cols=57 Identities=19% Similarity=0.272 Sum_probs=48.5
Q ss_pred HHHHHh-hhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCC--CchhHHHHHHhh
Q 033028 36 LQHMMY-GFGDDPNPLPETVALVEDIVVEYVTDLAHKAQDIGSKGGK--LSVEDFLYLIRK 93 (129)
Q Consensus 36 I~~mMy-~fGD~~~P~~ETv~l~EeIv~~~I~~l~~~A~~~A~~Rgk--is~eDl~F~lR~ 93 (129)
|..+|- +.|+. .-..++..+|-+++.+++..+..+|..++...|+ |+.|||.-++|-
T Consensus 7 I~rilk~~~~~~-ris~da~~~l~~~~~~~~~~Ia~eA~~l~~~~~rKTi~~edi~~a~~~ 66 (151)
T d1f1ea_ 7 IERIFRQGIGER-RLSQDAKDTIYDFVPTMAEYVANAAKSVLDASGKKTLMEEHLKALADV 66 (151)
T ss_dssp HHHHHHTTSTTC-EECHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCSEECHHHHHHHHHH
T ss_pred HHHHHHHhCCcc-ccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCHHHHHHHHHh
Confidence 556664 46875 5789999999999999999999999999987665 999999999873
No 14
>d1tafa_ a.22.1.3 (A:) TAF(II)42 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=88.17 E-value=1.2 Score=27.55 Aligned_cols=56 Identities=14% Similarity=0.250 Sum_probs=44.0
Q ss_pred HHHHHhhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCC--CchhHHHHHHh
Q 033028 36 LQHMMYGFGDDPNPLPETVALVEDIVVEYVTDLAHKAQDIGSKGGK--LSVEDFLYLIR 92 (129)
Q Consensus 36 I~~mMy~fGD~~~P~~ETv~l~EeIv~~~I~~l~~~A~~~A~~Rgk--is~eDl~F~lR 92 (129)
|..+|-.+| +.+=.|..+..+-|....|.++++..|.-+|...|+ |..||+..++.
T Consensus 7 i~~iL~~~G-V~~yeprV~~qlLef~yRYtt~VL~DA~vys~HA~k~~id~dDVkLAi~ 64 (68)
T d1tafa_ 7 IMSILKELN-VQEYEPRVVNQLLEFTFRYVTSILDDAKVYANHARKKTIDLDDVRLATE 64 (68)
T ss_dssp HHHHHHHTT-CCCBCTHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSBCHHHHHHHHH
T ss_pred HHHHHHHcC-CccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHH
Confidence 444555554 456677788888899999999999999988876654 99999988764
No 15
>d1tafb_ a.22.1.3 (B:) TAF(II)62 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=82.59 E-value=2.3 Score=26.36 Aligned_cols=46 Identities=17% Similarity=0.142 Sum_probs=38.2
Q ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHHhhh--cCCCCchhHHHHHHh
Q 033028 47 PNPLPETVALVEDIVVEYVTDLAHKAQDIGS--KGGKLSVEDFLYLIR 92 (129)
Q Consensus 47 ~~P~~ETv~l~EeIv~~~I~~l~~~A~~~A~--~Rgkis~eDl~F~lR 92 (129)
.+..+|....+-+=|.--|.++++.|.+.-. +|.+++++||=.+||
T Consensus 22 ~~l~de~a~~LA~DveYRl~eiiQeA~KFMrhskR~~Ltt~Did~ALk 69 (70)
T d1tafb_ 22 GSLSDDAAKELAEDVSIKLKRIVQDAAKFMNHAKRQKLSVRDIDMSLK 69 (70)
T ss_dssp CCBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSBCHHHHHHHHC
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcCcHHHHHHHHc
Confidence 4577888888888888889999999988763 577899999998886
No 16
>d2byka1 a.22.1.3 (A:29-100) Chrac-16 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=82.58 E-value=2.9 Score=25.39 Aligned_cols=52 Identities=19% Similarity=0.109 Sum_probs=44.3
Q ss_pred CCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhh-cCC-C-CchhHHHHHHhhCh
Q 033028 44 GDDPNPLPETVALVEDIVVEYVTDLAHKAQDIGS-KGG-K-LSVEDFLYLIRKDL 95 (129)
Q Consensus 44 GD~~~P~~ETv~l~EeIv~~~I~~l~~~A~~~A~-~Rg-k-is~eDl~F~lR~D~ 95 (129)
.|+..-..|+.-++-.-.--||.+|+.+|...+. .++ + |+.+||.=++.+++
T Consensus 5 ~dv~~is~ea~~lvskAtElFi~~L~~~a~~~a~~~~~~ktl~~~dl~~aV~~~~ 59 (72)
T d2byka1 5 MDTGLITNEVLFLMTKCTELFVRHLAGAAYTEEFGQRPGEALKYEHLSQVVNKNK 59 (72)
T ss_dssp SSCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCEECHHHHHHHHHTCS
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCccccHHHHHHHHccCc
Confidence 5778888999999999999999999999988774 233 4 99999999998876
No 17
>d1q9ca_ a.22.1.3 (A:) Histone domain of Son of sevenless protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=74.30 E-value=3.3 Score=29.53 Aligned_cols=49 Identities=8% Similarity=0.010 Sum_probs=34.5
Q ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHhhhc--CCCCchhHHHHHHhhChh
Q 033028 48 NPLPETVALVEDIVVEYVTDLAHKAQDIGSK--GGKLSVEDFLYLIRKDLP 96 (129)
Q Consensus 48 ~P~~ETv~l~EeIv~~~I~~l~~~A~~~A~~--Rgkis~eDl~F~lR~D~~ 96 (129)
.-...+.-++=.++-....+++..|.+.|.. |.+|+.+||.-++|+|..
T Consensus 116 RVs~~A~vyLaavLEyl~aeILelAgn~a~~~krkrItp~dI~lAi~nD~e 166 (172)
T d1q9ca_ 116 KIDHQVSVYIVAVLEYISADILKLAGNYVRNIRHYEITKQDIKVAMCADKV 166 (172)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSBCCHHHHHHHHHTCHH
T ss_pred ccccchHHHHHHHHHHHHHHHHHHHHHHHHHcCCceecHHHHHHHHhCCHH
Confidence 4555555555556555566777777777653 455999999999999974
No 18
>d1f66c_ a.22.1.1 (C:) Histone H2A {Human (Homo sapiens), variant H2A.Z [TaxId: 9606]}
Probab=61.51 E-value=5 Score=26.19 Aligned_cols=39 Identities=21% Similarity=0.172 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHhhChh
Q 033028 57 VEDIVVEYVTDLAHKAQDIGSKGGKLSVEDFLYLIRKDLP 96 (129)
Q Consensus 57 ~EeIv~~~I~~l~~~A~~~A~~Rgkis~eDl~F~lR~D~~ 96 (129)
+=|++...|.++..++.... .+.+|+.+|+.-++|||..
T Consensus 42 vLEYL~aEILelagn~a~~~-~~~rItpr~l~lai~nD~E 80 (103)
T d1f66c_ 42 ILEYLTAEVLELAGNASKDL-KVKRITPRHLQLAIRGDEE 80 (103)
T ss_dssp HHHHHHHHHHHHHHHHHHTT-TCSEECHHHHHHHHHHSHH
T ss_pred HHHHHHHHHHHHhhhhhccC-CCCeeechhhhccccCcHH
Confidence 33444444555554443322 3445999999999999973
No 19
>d1a9xa1 a.92.1.1 (A:403-555) Carbamoyl phosphate synthetase, large subunit connection domain {Escherichia coli [TaxId: 562]}
Probab=60.03 E-value=10 Score=25.93 Aligned_cols=36 Identities=28% Similarity=0.368 Sum_probs=29.9
Q ss_pred hcCCCCchhHHHHHHhhChhhHhHHHHHHHHHHHHHH
Q 033028 77 SKGGKLSVEDFLYLIRKDLPKLNRCTELLSMQEELKQ 113 (129)
Q Consensus 77 ~~Rgkis~eDl~F~lR~D~~Kl~Rl~~lL~~k~~ik~ 113 (129)
.++| +++|+|-=+-.=||=-|.+|++++.+.++++.
T Consensus 41 lr~G-~sveeI~elTkID~WFL~qi~~Iv~~E~~l~~ 76 (153)
T d1a9xa1 41 FRAG-LSVDGVFNLTNIDRWFLVQIEELVRLEEKVAE 76 (153)
T ss_dssp HHTT-BCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHcC-CCHHHHHHhhCeeeHHHHHHHHHHHHHhhhhh
Confidence 3455 99999999999999999999999987665553
No 20
>d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}
Probab=56.47 E-value=24 Score=23.41 Aligned_cols=43 Identities=14% Similarity=0.270 Sum_probs=29.5
Q ss_pred cHHHHHHHHHHH------------HHHHHHHHHHHHHhhhcCC--CCchhHHHHHHh
Q 033028 50 LPETVALVEDIV------------VEYVTDLAHKAQDIGSKGG--KLSVEDFLYLIR 92 (129)
Q Consensus 50 ~~ETv~l~EeIv------------~~~I~~l~~~A~~~A~~Rg--kis~eDl~F~lR 92 (129)
.++.++++-+.. ...+.++|..|...|...| .|+.|||.-++.
T Consensus 215 ~~~~l~~ia~~~~~~~~~~~~~G~~R~a~~ll~~a~~~A~~~~~~~I~~edv~~A~~ 271 (276)
T d1fnna2 215 SEDILQMIADITGAQTPLDTNRGDARLAIDILYRSAYAAQQNGRKHIAPEDVRKSSK 271 (276)
T ss_dssp CHHHHHHHHHHHSBSSTTCTTSCCHHHHHHHHHHHHHHHHHTTCSSCCHHHHHHHHH
T ss_pred cHHHHHHHHHHhhhhhhhhhcCCCHHHHHHHHHHHHHHHHHcCCCCcCHHHHHHHHH
Confidence 355566555544 3467888999988886655 499999876654
No 21
>d1wh7a_ a.4.1.1 (A:) ZF-HD homeobox protein At4g24660 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=53.09 E-value=12 Score=22.75 Aligned_cols=33 Identities=18% Similarity=0.016 Sum_probs=20.9
Q ss_pred ccccccccccHHHHHHHHhh-----hCCCCCCcHHHHH
Q 033028 23 TSFKRKRGVFQKDLQHMMYG-----FGDDPNPLPETVA 55 (129)
Q Consensus 23 ~~~~~kk~~f~~EI~~mMy~-----fGD~~~P~~ETv~ 55 (129)
...||++..|+.+=.+.|.. |--.++|..+...
T Consensus 15 ~~~kR~Rt~ft~~Q~~~L~~~fe~~~~~~~~p~~~~~~ 52 (80)
T d1wh7a_ 15 GTTKRFRTKFTAEQKEKMLAFAERLGWRIQKHDDVAVE 52 (80)
T ss_dssp CCSSCCCCCCCHHHHHHHHHHHHHHTSCCCSSTTHHHH
T ss_pred cCCCCccccCCHHHHHHHHHHHHHhcccccCcCHHHHH
Confidence 34456778998887777733 2336777766544
No 22
>d1u35c1 a.22.1.1 (C:814-919) macro-H2A.1, histone domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=52.62 E-value=12 Score=24.42 Aligned_cols=39 Identities=21% Similarity=0.276 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHhhChh
Q 033028 57 VEDIVVEYVTDLAHKAQDIGSKGGKLSVEDFLYLIRKDLP 96 (129)
Q Consensus 57 ~EeIv~~~I~~l~~~A~~~A~~Rgkis~eDl~F~lR~D~~ 96 (129)
+=|++.-.|.++.-++.... .+.+|++.|+.-++|+|..
T Consensus 41 VLEYL~aEILELAgn~a~~~-k~~rItprhi~lairnD~E 79 (106)
T d1u35c1 41 VLEYLTAEILELAVNAARDN-KKGRVTPRHILLAVANDEE 79 (106)
T ss_dssp HHHHHHHHHHHHHHHHHHHT-TCSEECHHHHHHHHHHSHH
T ss_pred HHHHHHHHHHHHHHHHHHHc-CCCeeecchhhhcccCHHH
Confidence 44455555555555544432 3445999999999999964
No 23
>d1tzya_ a.22.1.1 (A:) Histone H2A {Chicken (Gallus gallus), erythrocytes [TaxId: 9031]}
Probab=51.97 E-value=13 Score=24.34 Aligned_cols=39 Identities=21% Similarity=0.210 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHhhChh
Q 033028 57 VEDIVVEYVTDLAHKAQDIGSKGGKLSVEDFLYLIRKDLP 96 (129)
Q Consensus 57 ~EeIv~~~I~~l~~~A~~~A~~Rgkis~eDl~F~lR~D~~ 96 (129)
|=|++.-.|.+|.-++.... .+.+|+..|+.-++|+|..
T Consensus 42 VLEYLtaEiLELAgn~a~~~-k~~rItPrhi~lAirnDee 80 (106)
T d1tzya_ 42 VLEYLTAEILELAGNAARDN-KKTRIIPRHLQLAIRNDEE 80 (106)
T ss_dssp HHHHHHHHHHHHHHHHHHHT-TCSEECHHHHHHHHHTSHH
T ss_pred HHHHHHHHHHHHhhHHHHhc-CCceecchhhhhcccCHHH
Confidence 44555555555555554432 3445999999999999964
No 24
>d1tzyb_ a.22.1.1 (B:) Histone H2B {Chicken (Gallus gallus), erythrocytes [TaxId: 9031]}
Probab=47.93 E-value=29 Score=21.93 Aligned_cols=44 Identities=9% Similarity=0.230 Sum_probs=37.4
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCC--CchhHHHHHHh
Q 033028 49 PLPETVALVEDIVVEYVTDLAHKAQDIGSKGGK--LSVEDFLYLIR 92 (129)
Q Consensus 49 P~~ETv~l~EeIv~~~I~~l~~~A~~~A~~Rgk--is~eDl~F~lR 92 (129)
-...++.+|..+|.+..-.+..+|.++|...++ |+..|+-=++|
T Consensus 22 iS~kam~imnsfvndiferIa~EA~~La~~~kr~TitsreIqtAvr 67 (92)
T d1tzyb_ 22 ISSKAMGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVR 67 (92)
T ss_dssp ECHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCcHHHHHHHHH
Confidence 457889999999999999999999999976554 99999887776
No 25
>d1pufa_ a.4.1.1 (A:) Homeobox protein hox-a9 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=46.21 E-value=19 Score=21.71 Aligned_cols=32 Identities=16% Similarity=0.054 Sum_probs=22.3
Q ss_pred cccccccHH-HHHHHHhhhCCCCCCcHHHHHHH
Q 033028 26 KRKRGVFQK-DLQHMMYGFGDDPNPLPETVALV 57 (129)
Q Consensus 26 ~~kk~~f~~-EI~~mMy~fGD~~~P~~ETv~l~ 57 (129)
++++..|+. .+..|--.|-..++|..+....|
T Consensus 14 rr~Rt~ft~~Ql~~Le~~F~~~~yPs~~~r~~L 46 (77)
T d1pufa_ 14 RKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEV 46 (77)
T ss_dssp SCCCCCCCHHHHHHHHHHHHHCSSCCHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHH
Confidence 345667854 46666677888889998876643
No 26
>d1x2na1 a.4.1.1 (A:6-67) Homeobox protein pknox1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=42.95 E-value=17 Score=20.99 Aligned_cols=32 Identities=28% Similarity=0.487 Sum_probs=22.4
Q ss_pred cccccccHHHHHHHH----hhhCCCCCCcHHHHHHH
Q 033028 26 KRKRGVFQKDLQHMM----YGFGDDPNPLPETVALV 57 (129)
Q Consensus 26 ~~kk~~f~~EI~~mM----y~fGD~~~P~~ETv~l~ 57 (129)
|++++.|.+|...+| +.+-+.++|..+....|
T Consensus 3 krkR~~~~~~~~~iL~~wf~~~~~nPyPs~~e~~~L 38 (62)
T d1x2na1 3 KNKRGVLPKHATNVMRSWLFQHIGHPYPTEDEKKQI 38 (62)
T ss_dssp CCSSCCCCHHHHHHHHHHHHHTTTSCCCCHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHhccCCCcCHHHHHHH
Confidence 456678888766665 45678888888776544
No 27
>d1w5sa2 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-terminal domain {Aeropyrum pernix [TaxId: 56636]}
Probab=40.74 E-value=45 Score=22.04 Aligned_cols=44 Identities=16% Similarity=0.178 Sum_probs=30.5
Q ss_pred cHHHHHHHHHHH---------HHHHHHHHHHHHHhhhcCC--CCchhHHHHHHhh
Q 033028 50 LPETVALVEDIV---------VEYVTDLAHKAQDIGSKGG--KLSVEDFLYLIRK 93 (129)
Q Consensus 50 ~~ETv~l~EeIv---------~~~I~~l~~~A~~~A~~Rg--kis~eDl~F~lR~ 93 (129)
.++.+.++-+.+ ...++++|..|...|...| .|+.+|+.=++..
T Consensus 232 ~~~al~~ia~~~~~~~~~~gd~R~ai~~l~~a~~~A~~~~~~~It~~~V~~A~~e 286 (287)
T d1w5sa2 232 EPRHLELISDVYGEDKGGDGSARRAIVALKMACEMAEAMGRDSLSEDLVRKAVSE 286 (287)
T ss_dssp CHHHHHHHHHHHCGGGTSCCCHHHHHHHHHHHHHHHHHTTCSSCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHcCCCCCCHHHHHHHHhc
Confidence 356666555444 3367789999998886554 5999999876654
No 28
>d2f6ma1 a.2.17.1 (A:322-385) Vacuolar protein sorting-associated protein 23, VPS23 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=39.86 E-value=27 Score=20.82 Aligned_cols=39 Identities=15% Similarity=0.173 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHhh
Q 033028 55 ALVEDIVVEYVTDLAHKAQDIGSKGGKLSVEDFLYLIRK 93 (129)
Q Consensus 55 ~l~EeIv~~~I~~l~~~A~~~A~~Rgkis~eDl~F~lR~ 93 (129)
++++-...+.-++-+.-+..-|-.+|+|++|.++=.+|.
T Consensus 6 Ql~~l~Aed~AieDaiy~L~~aL~~G~I~~d~ylK~vR~ 44 (64)
T d2f6ma1 6 QLYNLVAQDYALTDTIEALSRMLHRGTIPLDTFVKQGRE 44 (64)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCcCHHHHHHHHHH
Confidence 455555555555555556655667899999999876663
No 29
>d1rp3a3 a.177.1.1 (A:0-86) Sigma factor sigma-28 (FliA) {Aquifex aeolicus [TaxId: 63363]}
Probab=34.68 E-value=41 Score=20.28 Aligned_cols=59 Identities=14% Similarity=0.330 Sum_probs=39.0
Q ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC-CCchhHHHH--------HH-hhChhhHhHHHHHHHH
Q 033028 48 NPLPETVALVEDIVVEYVTDLAHKAQDIGSKGG-KLSVEDFLY--------LI-RKDLPKLNRCTELLSM 107 (129)
Q Consensus 48 ~P~~ETv~l~EeIv~~~I~~l~~~A~~~A~~Rg-kis~eDl~F--------~l-R~D~~Kl~Rl~~lL~~ 107 (129)
+|..+.++ -|++|.+|+--+-.-|.++..+.+ .+..|||+= ++ |-||.|=.++..|..+
T Consensus 4 n~~~~~~~-re~li~~~~~LV~~ia~~~~~~~~~~~e~eDL~q~G~igL~~A~~~yd~~~g~~F~tYA~~ 72 (87)
T d1rp3a3 4 NPYSNQIE-REELILKYLPLVKAIATNIKKHLPEDVDIRDLISYGVIGLIKAVDNLSTENPKRAEAYIKL 72 (87)
T ss_dssp CHHHHHHH-HHHHHHHHHHHHHHHHHHHHTTSCTTSCHHHHHHHHHHHHHHHHHTCCCCCTHHHHHHHHH
T ss_pred CcccCHHH-HHHHHHHhHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHhhCCCCCCCHHHHHHH
Confidence 34444432 478888888888888888765433 388999853 22 3478776677777654
No 30
>d1b72a_ a.4.1.1 (A:) Homeobox protein hox-b1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=34.20 E-value=30 Score=21.26 Aligned_cols=32 Identities=13% Similarity=-0.012 Sum_probs=21.0
Q ss_pred ccccccccH-HHHHHHHhhhCCCCCCcHHHHHH
Q 033028 25 FKRKRGVFQ-KDLQHMMYGFGDDPNPLPETVAL 56 (129)
Q Consensus 25 ~~~kk~~f~-~EI~~mMy~fGD~~~P~~ETv~l 56 (129)
.++++..|+ ..+..|--.|-.+++|..+....
T Consensus 27 ~kr~Rt~ft~~Ql~~Le~~F~~n~yPs~~~r~~ 59 (88)
T d1b72a_ 27 PSGLRTNFTTRQLTELEKEFHFNKYLSRARRVE 59 (88)
T ss_dssp ---CCCCCCHHHHHHHHHHHTTCSSCCHHHHHH
T ss_pred CCCCCcCCCHHHHHHHHHHHHhCCCCchHHHHH
Confidence 355666785 45666667788888999887643
No 31
>d1ku3a_ a.4.13.2 (A:) Sigma70 (SigA, RpoD) {Thermus aquaticus [TaxId: 271]}
Probab=33.24 E-value=29 Score=19.90 Aligned_cols=41 Identities=20% Similarity=0.188 Sum_probs=27.9
Q ss_pred HHHHHHHHhhhCCCCCCc-HHHHHHHHHHHHHHHHHHHHHHHH
Q 033028 33 QKDLQHMMYGFGDDPNPL-PETVALVEDIVVEYVTDLAHKAQD 74 (129)
Q Consensus 33 ~~EI~~mMy~fGD~~~P~-~ETv~l~EeIv~~~I~~l~~~A~~ 74 (129)
..+|=.|-||+||...-. .|....+ .|-.+.|..+-.+|.+
T Consensus 13 er~Ii~~ryGl~~~~~~tl~eIa~~l-giS~erVrqi~~~al~ 54 (61)
T d1ku3a_ 13 EAMVLKMRKGLIDGREHTLEEVGAYF-GVTRERIRQIENKALR 54 (61)
T ss_dssp HHHHHHHHHTTTTSSCCCHHHHHHHH-TCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCCCCHHHHHHHH-CCCHHHHHHHHHHHHH
Confidence 357888999998655443 4444444 5777888888877764
No 32
>d1k6ka_ a.174.1.1 (A:) N-terminal, ClpS-binding domain of ClpA, an Hsp100 chaperone {Escherichia coli [TaxId: 562]}
Probab=31.32 E-value=27 Score=21.78 Aligned_cols=32 Identities=13% Similarity=0.114 Sum_probs=24.2
Q ss_pred HHHHHHHHHHhhhcCCC--CchhHHHHHHhhChh
Q 033028 65 VTDLAHKAQDIGSKGGK--LSVEDFLYLIRKDLP 96 (129)
Q Consensus 65 I~~l~~~A~~~A~~Rgk--is~eDl~F~lR~D~~ 96 (129)
+..++..|...|...|. |++|+|+.+|=.++.
T Consensus 84 l~~il~~A~~~a~~~~~~~i~~ehlLlall~~~~ 117 (142)
T d1k6ka_ 84 FQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQE 117 (142)
T ss_dssp HHHHHHHHHHHHHSSSCSCBCHHHHHHHHTTCTT
T ss_pred HHHHHHHHHHHHHHcCCCcchHHHHHHHHHHccC
Confidence 55667788888876554 999999998866543
No 33
>d1khya_ a.174.1.1 (A:) N-terminal domain of ClpB (heat shock protein F84.1) {Escherichia coli [TaxId: 562]}
Probab=30.36 E-value=21 Score=22.34 Aligned_cols=34 Identities=6% Similarity=-0.038 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHHhhhcCCC--CchhHHHHHHhhChh
Q 033028 63 EYVTDLAHKAQDIGSKGGK--LSVEDFLYLIRKDLP 96 (129)
Q Consensus 63 ~~I~~l~~~A~~~A~~Rgk--is~eDl~F~lR~D~~ 96 (129)
+...+++..|..+|..+|- |.++.|++.|=.++.
T Consensus 5 ~~~~~~l~~A~~~A~~~~h~~v~~eHlL~all~~~~ 40 (139)
T d1khya_ 5 NKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEG 40 (139)
T ss_dssp HHHHHHHHHHHHHHHHTTCSSBCHHHHHHHHHTCTT
T ss_pred HHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHhCcc
Confidence 4567889999999987774 999999999976653
No 34
>d1upka_ a.118.1.15 (A:) Mo25 protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=29.94 E-value=21 Score=27.62 Aligned_cols=36 Identities=19% Similarity=0.372 Sum_probs=19.4
Q ss_pred cHHHHHHHHhhhCCCCCCcHHHHH-HHHHHHHHHHHHH
Q 033028 32 FQKDLQHMMYGFGDDPNPLPETVA-LVEDIVVEYVTDL 68 (129)
Q Consensus 32 f~~EI~~mMy~fGD~~~P~~ETv~-l~EeIv~~~I~~l 68 (129)
...+++.++||-||. +|.+|.+. |..+|..+-+.-+
T Consensus 37 ~l~~mK~iL~G~~e~-ep~~e~~~qL~~e~~~~d~l~~ 73 (330)
T d1upka_ 37 NLVAMKEILYGTNEK-EPQTEAVAQLAQELYNSGLLST 73 (330)
T ss_dssp HHHHHHHHHC--------CHHHHHHHHHHHHHHSHHHH
T ss_pred HHHHHHHHhcCCCCC-CCCHHHHHHHHHHHHHhChHHH
Confidence 446677889999994 67777665 7788766544333
No 35
>d2a6sa1 d.298.1.1 (A:1-83) Toxin YoeB {Escherichia coli [TaxId: 562]}
Probab=29.78 E-value=23 Score=21.88 Aligned_cols=23 Identities=26% Similarity=0.499 Sum_probs=21.1
Q ss_pred hhHHHHHHhhChhhHhHHHHHHH
Q 033028 84 VEDFLYLIRKDLPKLNRCTELLS 106 (129)
Q Consensus 84 ~eDl~F~lR~D~~Kl~Rl~~lL~ 106 (129)
.+|+.+.-..|++.+.||..+|.
T Consensus 10 ~~d~~~~~~~d~k~~kkI~~ll~ 32 (83)
T d2a6sa1 10 WDDYLYWQETDKRIVKKINELIK 32 (83)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCHHHHHHHHHHHH
Confidence 57999999999999999999995
No 36
>d1q9ca_ a.22.1.3 (A:) Histone domain of Son of sevenless protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=28.66 E-value=85 Score=21.63 Aligned_cols=44 Identities=14% Similarity=0.260 Sum_probs=36.0
Q ss_pred cccccccHHHHHHHHhhhCCCCCCcHHHHHHHHHHHHHHHHHHH
Q 033028 26 KRKRGVFQKDLQHMMYGFGDDPNPLPETVALVEDIVVEYVTDLA 69 (129)
Q Consensus 26 ~~kk~~f~~EI~~mMy~fGD~~~P~~ETv~l~EeIv~~~I~~l~ 69 (129)
++-|++|..-|.+++.-.==.---..++...|++++.+.+..||
T Consensus 12 ~~w~g~f~~~i~KVl~qvhP~l~i~~~Al~~i~~~i~~ll~~L~ 55 (172)
T d1q9ca_ 12 PKWRGLLVPALKKVQGQVHPTLESNDDALQYVEELILQLLNMLC 55 (172)
T ss_dssp HHHTTSSHHHHHHHHHHHCSSSBCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHH
Confidence 45689999999999976654445788999999999988877776
No 37
>d2o4ta1 a.69.4.1 (A:16-105) Uncharacterized protein BH3976 {Bacillus halodurans [TaxId: 86665]}
Probab=28.13 E-value=39 Score=20.97 Aligned_cols=30 Identities=23% Similarity=0.480 Sum_probs=21.7
Q ss_pred ccHHHHHHHHhhhCCCCCCcHHHHHHHHHHHH
Q 033028 31 VFQKDLQHMMYGFGDDPNPLPETVALVEDIVV 62 (129)
Q Consensus 31 ~f~~EI~~mMy~fGD~~~P~~ETv~l~EeIv~ 62 (129)
.+.++|+..|+.+|+. ...++..++++|+.
T Consensus 14 ~~y~~i~~YL~~~~~~--~~~~~~~il~dil~ 43 (90)
T d2o4ta1 14 IVYKEIQKYLFKVGPV--ELNEGIGLLSEILG 43 (90)
T ss_dssp HHHHHHHHHHHHHSCC--SHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCC--CHHHHHHHHHHHHH
Confidence 4678999999999987 45566566666543
No 38
>d2o3la1 a.69.4.1 (A:14-95) Hypothetical protein BCE3448 {Bacillus cereus [TaxId: 1396]}
Probab=27.99 E-value=39 Score=20.64 Aligned_cols=30 Identities=13% Similarity=0.263 Sum_probs=21.9
Q ss_pred ccHHHHHHHHhhhCCCCCCcHHHHHHHHHHHH
Q 033028 31 VFQKDLQHMMYGFGDDPNPLPETVALVEDIVV 62 (129)
Q Consensus 31 ~f~~EI~~mMy~fGD~~~P~~ETv~l~EeIv~ 62 (129)
..-++|+.-|+.+|+. +..++..++++|+.
T Consensus 18 ~~y~~i~~YL~~~~~~--~~~~~~~il~dil~ 47 (82)
T d2o3la1 18 FVFKKIQNYMWNFSAG--NGMDMLHIQYELID 47 (82)
T ss_dssp HHHHHHHHHHHHHCCS--CHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCC--CHHHHHHHHHHHHH
Confidence 4568899999999997 45666666666554
No 39
>d1ixza_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Thermus thermophilus [TaxId: 274]}
Probab=26.99 E-value=22 Score=25.19 Aligned_cols=34 Identities=18% Similarity=0.272 Sum_probs=23.9
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCC--CCchhHHHHHH
Q 033028 58 EDIVVEYVTDLAHKAQDIGSKGG--KLSVEDFLYLI 91 (129)
Q Consensus 58 EeIv~~~I~~l~~~A~~~A~~Rg--kis~eDl~F~l 91 (129)
+.+.--.|..+|..|...|.+++ .|+.+||.-++
T Consensus 211 ~g~s~~di~~lv~~A~l~a~~~~~~~i~~~d~~~A~ 246 (247)
T d1ixza_ 211 PGFVGADLENLLNEAALLAAREGRRKITMKDLEEAA 246 (247)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHTTCSSBCHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHHHHHHcCCCCcCHHHHHHhh
Confidence 34444568888988887776655 39999987653
No 40
>d1c7va_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]}
Probab=26.07 E-value=29 Score=19.51 Aligned_cols=47 Identities=21% Similarity=0.434 Sum_probs=30.0
Q ss_pred HHHHHHHHhhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHhh
Q 033028 33 QKDLQHMMYGFGDDPNPLPETVALVEDIVVEYVTDLAHKAQDIGSKGGKLSVEDFLYLIRK 93 (129)
Q Consensus 33 ~~EI~~mMy~fGD~~~P~~ETv~l~EeIv~~~I~~l~~~A~~~A~~Rgkis~eDl~F~lR~ 93 (129)
..|++++|-.+|..+-+.. .+.+++..+= ...-|.|+.++|+-+|++
T Consensus 21 ~~el~~~l~~~g~~~~s~~------------e~~~~~~~~D--~d~dG~i~~~EF~~~m~r 67 (68)
T d1c7va_ 21 FDEFKFIMQKVGEEPLTDA------------EVEEAMKEAD--EDGNGVIDIPEFMDLIKK 67 (68)
T ss_dssp HHHHHHHSSTTTTCCCCHH------------HHHHHHHHHC--SSGGGSEEHHHHHHHHHC
T ss_pred HHHHHHHHHHhCCCCCCHH------------HHHHHHHHhC--CCCCCcEeHHHHHHHHHh
Confidence 7899999999997432222 2222232221 123578999999988875
No 41
>d1fi5a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]}
Probab=25.72 E-value=34 Score=19.79 Aligned_cols=46 Identities=17% Similarity=0.459 Sum_probs=29.6
Q ss_pred HHHHHHHHhhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHhh
Q 033028 33 QKDLQHMMYGFGDDPNPLPETVALVEDIVVEYVTDLAHKAQDIGSKGGKLSVEDFLYLIRK 93 (129)
Q Consensus 33 ~~EI~~mMy~fGD~~~P~~ETv~l~EeIv~~~I~~l~~~A~~~A~~Rgkis~eDl~F~lR~ 93 (129)
..||+.+|-.+|.. |..+. + ..++..+ .. ...|+|+.++|+-+|+.
T Consensus 34 ~~el~~~l~~~g~~--~~~~e---v--------~~~~~~~-D~-d~dg~I~~~EF~~~m~~ 79 (81)
T d1fi5a_ 34 LEELKIMLQATGET--ITEDD---I--------EELMKDG-DK-NNDGRIDYDEFLEFMKG 79 (81)
T ss_dssp HHHHHHHHHTSSSC--CCHHH---H--------HHHHHHH-CS-SSSSSEEHHHHHHHHSC
T ss_pred HHHHHHHHHhcCCC--CCHHH---H--------HHHHHHH-CC-CCCCcEeHHHHHHHHHh
Confidence 68899999999863 33332 2 2223322 21 34688999999988763
No 42
>d1k6ka_ a.174.1.1 (A:) N-terminal, ClpS-binding domain of ClpA, an Hsp100 chaperone {Escherichia coli [TaxId: 562]}
Probab=23.77 E-value=42 Score=20.78 Aligned_cols=34 Identities=12% Similarity=0.076 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHHhhhcCCC--CchhHHHHHHhhChh
Q 033028 63 EYVTDLAHKAQDIGSKGGK--LSVEDFLYLIRKDLP 96 (129)
Q Consensus 63 ~~I~~l~~~A~~~A~~Rgk--is~eDl~F~lR~D~~ 96 (129)
..+..++..|.+.|...|- |++|-|+++|=+|+.
T Consensus 4 ~~l~~~l~~A~~~A~~~~h~~i~~EHLL~aLl~~~~ 39 (142)
T d1k6ka_ 4 QELELSLNMAFARAREHRHEFMTVEHLLLALLSNPS 39 (142)
T ss_dssp HHHHHHHHHHHHHHHHHTBSEECHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHhchh
Confidence 3467778999999976653 999999999988865
No 43
>d1k94a_ a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.91 E-value=91 Score=20.20 Aligned_cols=15 Identities=20% Similarity=0.237 Sum_probs=10.7
Q ss_pred HHHHHHHHhhhCCCC
Q 033028 33 QKDLQHMMYGFGDDP 47 (129)
Q Consensus 33 ~~EI~~mMy~fGD~~ 47 (129)
..|++.+|-..|-..
T Consensus 18 ~~EL~~~L~~~g~~~ 32 (165)
T d1k94a_ 18 AEELQRCLTQSGING 32 (165)
T ss_dssp HHHHHHHHHHHTTTT
T ss_pred HHHHHHHHHHcCCCC
Confidence 468888887777544
No 44
>d1s5qb_ a.59.1.1 (B:) Sin3A {Mouse (Mus musculus) [TaxId: 10090]}
Probab=22.36 E-value=79 Score=19.04 Aligned_cols=37 Identities=22% Similarity=0.241 Sum_probs=26.3
Q ss_pred HHhhChhhHhHHHHHHHH---------------------HHHHHHHHhhcccchhhhh
Q 033028 90 LIRKDLPKLNRCTELLSM---------------------QEELKQARKAFEVDEEKLA 126 (129)
Q Consensus 90 ~lR~D~~Kl~Rl~~lL~~---------------------k~~ik~Ark~fd~de~~~~ 126 (129)
.+.++|.++..+-++|.. .+++.+++..|....+-|.
T Consensus 23 ~f~d~p~~Y~~FL~il~~f~~~~~~~~~~~~~~~~~~~~~~v~~rV~~Lf~~hpdLi~ 80 (89)
T d1s5qb_ 23 RFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVYAQVARLFKNQEDLLS 80 (89)
T ss_dssp HTTTCHHHHHHHHHHHHHHHHHHHHHHHSCSCCCCSCCHHHHHHHHHHHSCSCHHHHH
T ss_pred HHccChHHHHHHHHHHHHHHHhhhccccccccccccccHHHHHHHHHHHHccCHHHHH
Confidence 455788999988888755 2567777778877666554
No 45
>d2o7ta2 a.121.1.1 (A:79-188) Transcriptional regulator Cgl1640/Cg1846 {Corynebacterium glutamicum [TaxId: 1718]}
Probab=22.00 E-value=85 Score=19.46 Aligned_cols=40 Identities=13% Similarity=0.165 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCchhHHHHHH
Q 033028 52 ETVALVEDIVVEYVTDLAHKAQDIGSKGGKLSVEDFLYLI 91 (129)
Q Consensus 52 ETv~l~EeIv~~~I~~l~~~A~~~A~~Rgkis~eDl~F~l 91 (129)
+.+.-.-+-+.+.+..++.+|......|.-++..||..++
T Consensus 36 ~~~~~~r~~l~~~~~~ll~rA~~aG~iR~Dv~~~D~~~ll 75 (110)
T d2o7ta2 36 DEVSALRRTTEKNTTTLINLAKQHGLVHHDIAPGTYIVGL 75 (110)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTSSCTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCHHHHHHHH
Confidence 3455566778888888999998877778889999997765
No 46
>d2p7vb1 a.4.13.2 (B:546-613) Sigma70 (SigA, RpoD) {Escherichia coli [TaxId: 562]}
Probab=21.99 E-value=59 Score=18.92 Aligned_cols=40 Identities=20% Similarity=0.279 Sum_probs=28.8
Q ss_pred HHHHHHHhhhCCCC-CCcHHHHHHHHHHHHHHHHHHHHHHHH
Q 033028 34 KDLQHMMYGFGDDP-NPLPETVALVEDIVVEYVTDLAHKAQD 74 (129)
Q Consensus 34 ~EI~~mMy~fGD~~-~P~~ETv~l~EeIv~~~I~~l~~~A~~ 74 (129)
.+|=.|-||+|+.. ..+.|....+ .|-.+.|.++-.+|..
T Consensus 11 ~~Ii~~rfGl~~~~~~tl~eI~~~l-giSrerVrqie~~al~ 51 (68)
T d2p7vb1 11 AKVLRMRFGIDMNTDYTLEEVGKQF-DVTRERIRQIEAKALR 51 (68)
T ss_dssp HHHHHHHTTTTSSSCCCHHHHHHHH-TCCHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCCCCcCCHHHHHHHH-CCCHHHHHHHHHHHHH
Confidence 57888999998754 3444444444 6788888888888875
No 47
>d1xo5a_ a.39.1.5 (A:) Calcium- and integrin-binding protein, CIB {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.57 E-value=35 Score=22.48 Aligned_cols=19 Identities=16% Similarity=0.473 Sum_probs=16.8
Q ss_pred cCCCCchhHHHHHHhhChh
Q 033028 78 KGGKLSVEDFLYLIRKDLP 96 (129)
Q Consensus 78 ~Rgkis~eDl~F~lR~D~~ 96 (129)
.-|+|+.+||.-.+.++|.
T Consensus 153 ~dG~Is~~EF~~~~~~~P~ 171 (180)
T d1xo5a_ 153 RDGTINLSEFQHVISRSPD 171 (180)
T ss_dssp CSSSBCHHHHHHHHHHCHH
T ss_pred CCCcCcHHHHHHHHHhCHH
Confidence 3588999999999999994
No 48
>d1wg8a1 a.60.13.1 (A:109-206) Putative methyltransferase TM0872, insert domain {Thermus thermophilus [TaxId: 274]}
Probab=20.81 E-value=25 Score=22.21 Aligned_cols=20 Identities=15% Similarity=0.429 Sum_probs=16.3
Q ss_pred HHHHHHHHhhhCCCCCCcHH
Q 033028 33 QKDLQHMMYGFGDDPNPLPE 52 (129)
Q Consensus 33 ~~EI~~mMy~fGD~~~P~~E 52 (129)
..||..+++-|||.+++..=
T Consensus 31 ~~eL~~if~~yGee~~a~~i 50 (98)
T d1wg8a1 31 LEALARLLRELGEEPQAYRI 50 (98)
T ss_dssp HHHHHHHHHHHHCCTTHHHH
T ss_pred HHHHHHHHHHHhhhHHHHHH
Confidence 67899999999998765443
No 49
>d2opoa1 a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Chenopodium album) [TaxId: 3559]}
Probab=20.35 E-value=76 Score=18.09 Aligned_cols=48 Identities=19% Similarity=0.351 Sum_probs=30.8
Q ss_pred HHHHHHHHhhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHhhChh
Q 033028 33 QKDLQHMMYGFGDDPNPLPETVALVEDIVVEYVTDLAHKAQDIGSKGGKLSVEDFLYLIRKDLP 96 (129)
Q Consensus 33 ~~EI~~mMy~fGD~~~P~~ETv~l~EeIv~~~I~~l~~~A~~~A~~Rgkis~eDl~F~lR~D~~ 96 (129)
..|++.+|-.+|. |.++- |++ ++..+ . ....|.|+.++|+-+++..+.
T Consensus 25 ~~El~~~l~~lg~---~~~~e---i~~--------~~~~~-D-~d~~G~I~~~EF~~~~~~~~~ 72 (81)
T d2opoa1 25 SSELGDALKTLGS---VTPDE---VRR--------MMAEI-D-TDGDGFISFDEFTDFARANRG 72 (81)
T ss_dssp HHHHHHHHHTTTT---CCHHH---HHH--------HHHHH-C-TTCSSEECHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHhhc---CCHHH---HHH--------HHHHh-C-CCCCCeEeHHHHHHHHHHCcc
Confidence 6899999999983 43322 222 23222 1 123578999999998887643
Done!