BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033035
(129 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359386154|gb|AEV43366.1| group B HMG-box protein [Citrus sinensis]
Length = 165
Score = 254 bits (649), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 128/128 (100%), Positives = 128/128 (100%)
Query: 1 MKVTRGKGAVKKDKNEVVKPVEDRAAGKRKAVLKASRSSNKRTKNVKSAKKDPNKPKRPP 60
MKVTRGKGAVKKDKNEVVKPVEDRAAGKRKAVLKASRSSNKRTKNVKSAKKDPNKPKRPP
Sbjct: 1 MKVTRGKGAVKKDKNEVVKPVEDRAAGKRKAVLKASRSSNKRTKNVKSAKKDPNKPKRPP 60
Query: 61 SAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKLDYEKL 120
SAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKLDYEKL
Sbjct: 61 SAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKLDYEKL 120
Query: 121 MTAYNKKQ 128
MTAYNKKQ
Sbjct: 121 MTAYNKKQ 128
>gi|224112525|ref|XP_002316220.1| high mobility group family [Populus trichocarpa]
gi|222865260|gb|EEF02391.1| high mobility group family [Populus trichocarpa]
Length = 176
Score = 201 bits (511), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 102/128 (79%), Positives = 110/128 (85%)
Query: 1 MKVTRGKGAVKKDKNEVVKPVEDRAAGKRKAVLKASRSSNKRTKNVKSAKKDPNKPKRPP 60
MK+ +GKG + +K EV+ PVEDR GKRKA LKA+ SS KR K K KKDPNKPKRPP
Sbjct: 1 MKIAKGKGTARTEKKEVLLPVEDRKIGKRKAALKANESSKKRVKKEKITKKDPNKPKRPP 60
Query: 61 SAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKLDYEKL 120
SAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSL+ AEKAP+EAKAAKRK DYEKL
Sbjct: 61 SAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLSAAEKAPYEAKAAKRKSDYEKL 120
Query: 121 MTAYNKKQ 128
MTAYNKKQ
Sbjct: 121 MTAYNKKQ 128
>gi|225448398|ref|XP_002269398.1| PREDICTED: high mobility group B protein 1 isoform 1 [Vitis
vinifera]
gi|147854340|emb|CAN83423.1| hypothetical protein VITISV_023376 [Vitis vinifera]
Length = 166
Score = 194 bits (492), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 103/128 (80%), Positives = 112/128 (87%)
Query: 1 MKVTRGKGAVKKDKNEVVKPVEDRAAGKRKAVLKASRSSNKRTKNVKSAKKDPNKPKRPP 60
MKVT+GK A +KDK E +KPVEDR GKRKA LKA +S+ K K K AKKDPNKPKRPP
Sbjct: 1 MKVTKGKAAARKDKKEALKPVEDRRLGKRKAALKADKSTKKLAKKEKLAKKDPNKPKRPP 60
Query: 61 SAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKLDYEKL 120
SAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSL++A+KAP+EAKAAKRK DYEKL
Sbjct: 61 SAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLSEADKAPYEAKAAKRKSDYEKL 120
Query: 121 MTAYNKKQ 128
M AYNKKQ
Sbjct: 121 MAAYNKKQ 128
>gi|225448400|ref|XP_002270185.1| PREDICTED: high mobility group B protein 1 isoform 2 [Vitis
vinifera]
Length = 156
Score = 193 bits (490), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 103/128 (80%), Positives = 112/128 (87%)
Query: 1 MKVTRGKGAVKKDKNEVVKPVEDRAAGKRKAVLKASRSSNKRTKNVKSAKKDPNKPKRPP 60
MKVT+GK A +KDK E +KPVEDR GKRKA LKA +S+ K K K AKKDPNKPKRPP
Sbjct: 1 MKVTKGKAAARKDKKEALKPVEDRRLGKRKAALKADKSTKKLAKKEKLAKKDPNKPKRPP 60
Query: 61 SAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKLDYEKL 120
SAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSL++A+KAP+EAKAAKRK DYEKL
Sbjct: 61 SAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLSEADKAPYEAKAAKRKSDYEKL 120
Query: 121 MTAYNKKQ 128
M AYNKKQ
Sbjct: 121 MAAYNKKQ 128
>gi|118484946|gb|ABK94338.1| unknown [Populus trichocarpa]
Length = 171
Score = 185 bits (469), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 93/128 (72%), Positives = 106/128 (82%)
Query: 1 MKVTRGKGAVKKDKNEVVKPVEDRAAGKRKAVLKASRSSNKRTKNVKSAKKDPNKPKRPP 60
MK +GKGA + +K EV PVEDR GKRKA LKA+ SS KR K KKDP+KPKRPP
Sbjct: 1 MKTAKGKGAARTEKKEVSLPVEDRKIGKRKAALKATESSKKRAAKEKITKKDPDKPKRPP 60
Query: 61 SAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKLDYEKL 120
S+FFVFLEEFRK+YKQEHPN+KAVSAVGKAGGEKWKS++ AEKAP+EAKAA +K DY KL
Sbjct: 61 SSFFVFLEEFRKIYKQEHPNMKAVSAVGKAGGEKWKSMSAAEKAPYEAKAAIKKSDYGKL 120
Query: 121 MTAYNKKQ 128
MTAY+KKQ
Sbjct: 121 MTAYSKKQ 128
>gi|224098541|ref|XP_002311212.1| high mobility group family [Populus trichocarpa]
gi|222851032|gb|EEE88579.1| high mobility group family [Populus trichocarpa]
Length = 179
Score = 185 bits (469), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 93/128 (72%), Positives = 106/128 (82%)
Query: 1 MKVTRGKGAVKKDKNEVVKPVEDRAAGKRKAVLKASRSSNKRTKNVKSAKKDPNKPKRPP 60
MK +GKGA + +K EV PVEDR GKRKA LKA+ SS KR K KKDP+KPKRPP
Sbjct: 1 MKTAKGKGAARTEKKEVSLPVEDRKIGKRKAALKATESSKKRAAKEKITKKDPDKPKRPP 60
Query: 61 SAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKLDYEKL 120
S+FFVFLEEFRK+YKQEHPN+KAVSAVGKAGGEKWKS++ AEKAP+EAKAA +K DY KL
Sbjct: 61 SSFFVFLEEFRKIYKQEHPNMKAVSAVGKAGGEKWKSMSAAEKAPYEAKAAIKKSDYGKL 120
Query: 121 MTAYNKKQ 128
MTAY+KKQ
Sbjct: 121 MTAYSKKQ 128
>gi|255571919|ref|XP_002526902.1| DNA-binding protein MNB1B, putative [Ricinus communis]
gi|223533801|gb|EEF35533.1| DNA-binding protein MNB1B, putative [Ricinus communis]
Length = 190
Score = 183 bits (464), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 100/128 (78%), Positives = 112/128 (87%)
Query: 1 MKVTRGKGAVKKDKNEVVKPVEDRAAGKRKAVLKASRSSNKRTKNVKSAKKDPNKPKRPP 60
MKV +GK KKD+ EV+KPVEDR GKR A LK +++S K TK K AKKDPN+PKRPP
Sbjct: 1 MKVGKGKETAKKDRKEVLKPVEDRKLGKRSAALKPNKNSKKVTKKDKPAKKDPNRPKRPP 60
Query: 61 SAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKLDYEKL 120
SAFFVFLE+FRKVYKQEHPNVKAVSAVGKAGGEKWKS+++AEK+PFEAKAAKRK DYEKL
Sbjct: 61 SAFFVFLEDFRKVYKQEHPNVKAVSAVGKAGGEKWKSMSNAEKSPFEAKAAKRKSDYEKL 120
Query: 121 MTAYNKKQ 128
MTAYNKKQ
Sbjct: 121 MTAYNKKQ 128
>gi|449461783|ref|XP_004148621.1| PREDICTED: high mobility group B protein 1-like [Cucumis sativus]
Length = 169
Score = 168 bits (425), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 90/128 (70%), Positives = 105/128 (82%), Gaps = 1/128 (0%)
Query: 1 MKVTRGKGAVKKDKNEVVKPVEDRAAGKRKAVLKASRSSNKRTKNVKSAKKDPNKPKRPP 60
MK ++GKG + K E +KPV+DR GKRKAV+KA + + TK AKKDPNKPKRPP
Sbjct: 1 MKGSKGKGTSRVSK-EALKPVDDRKVGKRKAVVKADKGIKRPTKKDLKAKKDPNKPKRPP 59
Query: 61 SAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKLDYEKL 120
SAFFVFLEEFRK YK+E+PNVKAVSAVGKAGGEKWKSL+ AEKAP+EAKAAKRK +YEKL
Sbjct: 60 SAFFVFLEEFRKEYKRENPNVKAVSAVGKAGGEKWKSLSHAEKAPYEAKAAKRKAEYEKL 119
Query: 121 MTAYNKKQ 128
M AY+ K+
Sbjct: 120 MRAYDSKK 127
>gi|312281849|dbj|BAJ33790.1| unnamed protein product [Thellungiella halophila]
Length = 185
Score = 157 bits (397), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 83/126 (65%), Positives = 102/126 (80%), Gaps = 3/126 (2%)
Query: 1 MKVTRGKGAVKKDKNEVVKPVEDRAAGKRKAVLKASRSSNKRTKNVKSAKKDPNKPKRPP 60
MK +GK VK K E +KPV+DR GKRKA A++++ + T+ K AKKDPNKPKR P
Sbjct: 1 MKTAKGKDKVKTTK-ETLKPVDDRKVGKRKAP--AAKATKRETRKEKRAKKDPNKPKRAP 57
Query: 61 SAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKLDYEKL 120
SAFFVFLE+FR+ +K+E+PNVKAVSAVGKAGG+KWKS++ AEKAP+E KAAKRK +YEKL
Sbjct: 58 SAFFVFLEDFRQTFKKENPNVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKL 117
Query: 121 MTAYNK 126
M AYNK
Sbjct: 118 MDAYNK 123
>gi|359486418|ref|XP_003633441.1| PREDICTED: high mobility group B protein 1 [Vitis vinifera]
Length = 151
Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 90/128 (70%), Positives = 97/128 (75%), Gaps = 15/128 (11%)
Query: 1 MKVTRGKGAVKKDKNEVVKPVEDRAAGKRKAVLKASRSSNKRTKNVKSAKKDPNKPKRPP 60
MKVT+GK A +KDK E +KPVEDR GKRKA LKA +S+ K K K AKKDPNKPKRPP
Sbjct: 1 MKVTKGKAAARKDKKEALKPVEDRRLGKRKAALKADKSTKKLAKKEKLAKKDPNKPKRPP 60
Query: 61 SAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKLDYEKL 120
SAFFVFLEEFRKVYKQEHPNVKAVS A+KAP+EAKAAKRK DYEKL
Sbjct: 61 SAFFVFLEEFRKVYKQEHPNVKAVS---------------ADKAPYEAKAAKRKSDYEKL 105
Query: 121 MTAYNKKQ 128
M AYNKKQ
Sbjct: 106 MAAYNKKQ 113
>gi|407971018|ref|NP_001238631.1| uncharacterized protein LOC100499704 [Glycine max]
gi|255625939|gb|ACU13314.1| unknown [Glycine max]
Length = 166
Score = 156 bits (394), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 90/128 (70%), Positives = 102/128 (79%), Gaps = 3/128 (2%)
Query: 1 MKVTRGKGAVKKDKNEVVKPVEDRAAGKRKAVLKASRSSNKRTKNVKSAKKDPNKPKRPP 60
MK +GKGA + K E +KPV+DR GKRKA K RSS K K AKKDPNKPKRPP
Sbjct: 1 MKNAKGKGAARASK-ESLKPVDDRKVGKRKASGKPGRSSA--PKKEKKAKKDPNKPKRPP 57
Query: 61 SAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKLDYEKL 120
SAFFVFLEEFRK +K E+PNVKAVS VGKAGGEKWKSL+ AEKAP+E+KAAKRK +YEKL
Sbjct: 58 SAFFVFLEEFRKTFKAENPNVKAVSVVGKAGGEKWKSLSSAEKAPYESKAAKRKAEYEKL 117
Query: 121 MTAYNKKQ 128
+ AY+KKQ
Sbjct: 118 IKAYDKKQ 125
>gi|357506009|ref|XP_003623293.1| HMG1/2-like protein [Medicago truncatula]
gi|355498308|gb|AES79511.1| HMG1/2-like protein [Medicago truncatula]
gi|388511215|gb|AFK43669.1| unknown [Medicago truncatula]
Length = 170
Score = 152 bits (384), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 85/125 (68%), Positives = 100/125 (80%), Gaps = 3/125 (2%)
Query: 3 VTRGKGAVKKDKNEVVKPVEDRAAGKRKAVLKASRSSNKRTKNVKSAKKDPNKPKRPPSA 62
+T+GKG K + + +KPV+DR GKRKA K + + + K AKKDPNKPKRPPSA
Sbjct: 1 MTKGKGTAKTSR-DALKPVDDRKVGKRKAAAKPEKVPKTKKE--KKAKKDPNKPKRPPSA 57
Query: 63 FFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKLDYEKLMT 122
FFVFLE+FRK +K E+PNVKAVSAVGKAGGEKWKSLT AEKAP+EAKAAKRK++YEKLM
Sbjct: 58 FFVFLEDFRKTFKAENPNVKAVSAVGKAGGEKWKSLTKAEKAPYEAKAAKRKVEYEKLMN 117
Query: 123 AYNKK 127
AYN K
Sbjct: 118 AYNNK 122
>gi|297819892|ref|XP_002877829.1| hypothetical protein ARALYDRAFT_323737 [Arabidopsis lyrata subsp.
lyrata]
gi|297323667|gb|EFH54088.1| hypothetical protein ARALYDRAFT_323737 [Arabidopsis lyrata subsp.
lyrata]
Length = 185
Score = 152 bits (384), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 82/126 (65%), Positives = 99/126 (78%), Gaps = 3/126 (2%)
Query: 1 MKVTRGKGAVKKDKNEVVKPVEDRAAGKRKAVLKASRSSNKRTKNVKSAKKDPNKPKRPP 60
MK +GK VK K E +KPV+DR GKRKA A +++ + T+ K AKKDPNKPKR P
Sbjct: 1 MKTAKGKDKVKTTK-EALKPVDDRKVGKRKAP--AEKATKRETRKEKKAKKDPNKPKRAP 57
Query: 61 SAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKLDYEKL 120
SAFFVFLE+FR +K+E+PNVKAVSAVGKAGG+KWKS++ AEKAP+E KAAKRK +YEK
Sbjct: 58 SAFFVFLEDFRVTFKKENPNVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKQ 117
Query: 121 MTAYNK 126
M AYNK
Sbjct: 118 MDAYNK 123
>gi|255574381|ref|XP_002528104.1| DNA-binding protein MNB1B, putative [Ricinus communis]
gi|223532493|gb|EEF34283.1| DNA-binding protein MNB1B, putative [Ricinus communis]
Length = 171
Score = 152 bits (383), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 83/128 (64%), Positives = 100/128 (78%), Gaps = 1/128 (0%)
Query: 1 MKVTRGKGAVKKDKNEVVKPVEDRAAGKRKAVLKASRSSNKRTKNVKSAKKDPNKPKRPP 60
MK ++G GA K K+ +KP +DR GKRKA RSS + K K AKKDPNKPKRPP
Sbjct: 1 MKNSKGTGAAKASKD-ALKPADDRKVGKRKAAAAVDRSSKLKAKREKKAKKDPNKPKRPP 59
Query: 61 SAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKLDYEKL 120
SAFFVFLEEFRK +K+E+P+V +V+AVGKAGG KWKS++ AEKAP+EAKAAK+K +Y KL
Sbjct: 60 SAFFVFLEEFRKTFKKENPSVTSVAAVGKAGGAKWKSMSSAEKAPYEAKAAKKKDEYGKL 119
Query: 121 MTAYNKKQ 128
M AYNKKQ
Sbjct: 120 MNAYNKKQ 127
>gi|42572635|ref|NP_974413.1| high mobility group protein B1 [Arabidopsis thaliana]
gi|222423104|dbj|BAH19531.1| AT3G51880 [Arabidopsis thaliana]
gi|332645335|gb|AEE78856.1| high mobility group protein B1 [Arabidopsis thaliana]
Length = 185
Score = 151 bits (381), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 82/126 (65%), Positives = 98/126 (77%), Gaps = 3/126 (2%)
Query: 1 MKVTRGKGAVKKDKNEVVKPVEDRAAGKRKAVLKASRSSNKRTKNVKSAKKDPNKPKRPP 60
MK +GK VK K E +KPV+DR GKRKA A + + + T+ K AKKDPNKPKR P
Sbjct: 1 MKTAKGKDKVKTTK-EALKPVDDRKVGKRKAP--AEKPTKRETRKEKKAKKDPNKPKRAP 57
Query: 61 SAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKLDYEKL 120
SAFFVFLE+FR +K+E+PNVKAVSAVGKAGG+KWKS++ AEKAP+E KAAKRK +YEK
Sbjct: 58 SAFFVFLEDFRVTFKKENPNVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKQ 117
Query: 121 MTAYNK 126
M AYNK
Sbjct: 118 MDAYNK 123
>gi|15231065|ref|NP_190756.1| high mobility group protein B1 [Arabidopsis thaliana]
gi|145332807|ref|NP_001078269.1| high mobility group protein B1 [Arabidopsis thaliana]
gi|75274976|sp|O49595.1|HMGB1_ARATH RecName: Full=High mobility group B protein 1; AltName: Full=High
mobility group protein A; Short=AtHMGalpha; Short=HMG
alpha; AltName: Full=Nucleosome/chromatin assembly
factor group D 01; Short=Nucleosome/chromatin assembly
factor group D 1
gi|2832357|emb|CAA74400.1| HMG protein [Arabidopsis thaliana]
gi|3068715|gb|AAC14415.1| unknown [Arabidopsis thaliana]
gi|15912191|gb|AAL08229.1| At3g51880/ORF13 [Arabidopsis thaliana]
gi|21360557|gb|AAM47475.1| At3g51880/ORF13 [Arabidopsis thaliana]
gi|332645334|gb|AEE78855.1| high mobility group protein B1 [Arabidopsis thaliana]
gi|332645336|gb|AEE78857.1| high mobility group protein B1 [Arabidopsis thaliana]
Length = 178
Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 82/126 (65%), Positives = 98/126 (77%), Gaps = 3/126 (2%)
Query: 1 MKVTRGKGAVKKDKNEVVKPVEDRAAGKRKAVLKASRSSNKRTKNVKSAKKDPNKPKRPP 60
MK +GK VK K E +KPV+DR GKRKA A + + + T+ K AKKDPNKPKR P
Sbjct: 1 MKTAKGKDKVKTTK-EALKPVDDRKVGKRKAP--AEKPTKRETRKEKKAKKDPNKPKRAP 57
Query: 61 SAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKLDYEKL 120
SAFFVFLE+FR +K+E+PNVKAVSAVGKAGG+KWKS++ AEKAP+E KAAKRK +YEK
Sbjct: 58 SAFFVFLEDFRVTFKKENPNVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKQ 117
Query: 121 MTAYNK 126
M AYNK
Sbjct: 118 MDAYNK 123
>gi|334185909|ref|NP_001190062.1| high mobility group protein B1 [Arabidopsis thaliana]
gi|332645337|gb|AEE78858.1| high mobility group protein B1 [Arabidopsis thaliana]
Length = 161
Score = 150 bits (380), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 82/126 (65%), Positives = 98/126 (77%), Gaps = 3/126 (2%)
Query: 1 MKVTRGKGAVKKDKNEVVKPVEDRAAGKRKAVLKASRSSNKRTKNVKSAKKDPNKPKRPP 60
MK +GK VK K E +KPV+DR GKRKA A + + + T+ K AKKDPNKPKR P
Sbjct: 1 MKTAKGKDKVKTTK-EALKPVDDRKVGKRKAP--AEKPTKRETRKEKKAKKDPNKPKRAP 57
Query: 61 SAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKLDYEKL 120
SAFFVFLE+FR +K+E+PNVKAVSAVGKAGG+KWKS++ AEKAP+E KAAKRK +YEK
Sbjct: 58 SAFFVFLEDFRVTFKKENPNVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKQ 117
Query: 121 MTAYNK 126
M AYNK
Sbjct: 118 MDAYNK 123
>gi|351725417|ref|NP_001235556.1| uncharacterized protein LOC100305961 [Glycine max]
gi|255627113|gb|ACU13901.1| unknown [Glycine max]
Length = 169
Score = 149 bits (375), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 87/128 (67%), Positives = 99/128 (77%), Gaps = 3/128 (2%)
Query: 1 MKVTRGKGAVKKDKNEVVKPVEDRAAGKRKAVLKASRSSNKRTKNVKSAKKDPNKPKRPP 60
MK +GKGA + K E +KPV+DR GKRKA K +S + K K AKKDPNKPKRPP
Sbjct: 1 MKTAKGKGAARPSK-ESLKPVDDRKVGKRKASGKPEKS--RAPKKEKKAKKDPNKPKRPP 57
Query: 61 SAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKLDYEKL 120
SAF VFLEEFRK +K E+P VKAVS VGKAGGEKWKSL+ AEKAP+EAKAAKRK +YEKL
Sbjct: 58 SAFLVFLEEFRKTFKAENPLVKAVSVVGKAGGEKWKSLSSAEKAPYEAKAAKRKAEYEKL 117
Query: 121 MTAYNKKQ 128
+ AY KKQ
Sbjct: 118 IKAYEKKQ 125
>gi|297736623|emb|CBI25494.3| unnamed protein product [Vitis vinifera]
Length = 128
Score = 149 bits (375), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 80/101 (79%), Positives = 87/101 (86%)
Query: 1 MKVTRGKGAVKKDKNEVVKPVEDRAAGKRKAVLKASRSSNKRTKNVKSAKKDPNKPKRPP 60
MKVT+GK A +KDK E +KPVEDR GKRKA LKA +S+ K K K AKKDPNKPKRPP
Sbjct: 25 MKVTKGKAAARKDKKEALKPVEDRRLGKRKAALKADKSTKKLAKKEKLAKKDPNKPKRPP 84
Query: 61 SAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDA 101
SAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSL++A
Sbjct: 85 SAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLSEA 125
>gi|388497798|gb|AFK36965.1| unknown [Medicago truncatula]
Length = 170
Score = 147 bits (371), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 83/125 (66%), Positives = 98/125 (78%), Gaps = 3/125 (2%)
Query: 3 VTRGKGAVKKDKNEVVKPVEDRAAGKRKAVLKASRSSNKRTKNVKSAKKDPNKPKRPPSA 62
+T+GKG K + + +KPV+DR GKRKA K + + + K AKKDPNKPKRPPSA
Sbjct: 1 MTKGKGTAKTSR-DALKPVDDRKVGKRKAAAKPEKVPKTKKE--KKAKKDPNKPKRPPSA 57
Query: 63 FFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKLDYEKLMT 122
FFVFLE+FRK +K E+PNVKAVSAVGKAGG KWKSLT AEKAP+EAKA KRK++YEKLM
Sbjct: 58 FFVFLEDFRKTFKAENPNVKAVSAVGKAGGGKWKSLTKAEKAPYEAKAVKRKVEYEKLMD 117
Query: 123 AYNKK 127
AYN K
Sbjct: 118 AYNNK 122
>gi|116778852|gb|ABK21026.1| unknown [Picea sitchensis]
gi|116782574|gb|ABK22556.1| unknown [Picea sitchensis]
gi|116782678|gb|ABK22606.1| unknown [Picea sitchensis]
gi|116782786|gb|ABK22657.1| unknown [Picea sitchensis]
gi|116782898|gb|ABK22712.1| unknown [Picea sitchensis]
gi|116791878|gb|ABK26144.1| unknown [Picea sitchensis]
gi|148907501|gb|ABR16881.1| unknown [Picea sitchensis]
gi|224284566|gb|ACN40016.1| unknown [Picea sitchensis]
gi|224285212|gb|ACN40332.1| unknown [Picea sitchensis]
gi|224286734|gb|ACN41070.1| unknown [Picea sitchensis]
Length = 157
Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 70/121 (57%), Positives = 93/121 (76%)
Query: 8 GAVKKDKNEVVKPVEDRAAGKRKAVLKASRSSNKRTKNVKSAKKDPNKPKRPPSAFFVFL 67
G K + + +K VE++ GKRK K S+ S+++ K + A KDPNKPKRP SAFFVF+
Sbjct: 4 GKAKNEASSTLKKVEEKPIGKRKTAAKESKVSSRQEKKGRKAAKDPNKPKRPASAFFVFM 63
Query: 68 EEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKLDYEKLMTAYNKK 127
E+FRK YK+++PNVK+VS VGKAGG+KWKS+++A+KAP+ AKA KRK +YEK M AYN K
Sbjct: 64 EDFRKTYKEKNPNVKSVSVVGKAGGDKWKSMSEADKAPYVAKAGKRKTEYEKNMAAYNNK 123
Query: 128 Q 128
Q
Sbjct: 124 Q 124
>gi|388522261|gb|AFK49192.1| unknown [Lotus japonicus]
Length = 173
Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 82/126 (65%), Positives = 96/126 (76%), Gaps = 4/126 (3%)
Query: 3 VTRGKGAVKKDKNEVVKPVEDRAAGKRKAVLKASRSSNKRTKNVKSAKKDPNKPKRPPSA 62
+T+GK A K K EV+KPV+DR GKRKA +K + + + K K KPKRPPSA
Sbjct: 1 MTKGKKAGKTSK-EVLKPVDDRKVGKRKAAVKPDKGTAGKAKKAKKDPN---KPKRPPSA 56
Query: 63 FFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKLDYEKLMT 122
FFVFLE+FRK +K E+PNVK VSAVGKAGGEKWKSLT AEKAP+EAKAAKRK +YEKL+
Sbjct: 57 FFVFLEDFRKTFKAENPNVKGVSAVGKAGGEKWKSLTKAEKAPYEAKAAKRKAEYEKLIN 116
Query: 123 AYNKKQ 128
AYN KQ
Sbjct: 117 AYNNKQ 122
>gi|312282031|dbj|BAJ33881.1| unnamed protein product [Thellungiella halophila]
Length = 141
Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/105 (67%), Positives = 87/105 (82%), Gaps = 2/105 (1%)
Query: 26 AGKRKAVLKASR-SSNKR-TKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA 83
GK K ++S+ S NK+ TK K A KDPNKPKRP SAFFVF+EEFR+ YK+EHPN K+
Sbjct: 3 GGKSKTETRSSKLSVNKKPTKGGKGAAKDPNKPKRPASAFFVFMEEFRETYKKEHPNNKS 62
Query: 84 VSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKLDYEKLMTAYNKKQ 128
V+AVGKAGG+KWKSL+D+EKAP++AKA KRK++YEK M AYNKKQ
Sbjct: 63 VAAVGKAGGQKWKSLSDSEKAPYQAKADKRKVEYEKNMNAYNKKQ 107
>gi|106879575|emb|CAJ38371.1| HMG-protein [Plantago major]
Length = 212
Score = 134 bits (338), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 89/124 (71%), Positives = 100/124 (80%), Gaps = 4/124 (3%)
Query: 5 RGKGAVKKDKNEVVKPVEDRAAGKRKAVLKASRSSNKRTKNVKSAKKDPNKPKRPPSAFF 64
R K AV+K E +KPV+DR GKRKA A + K K AKKDPNKPKRPPSAFF
Sbjct: 52 RSKAAVRK---ETLKPVDDRKVGKRKAA-AAPKVKKPAAKKDKKAKKDPNKPKRPPSAFF 107
Query: 65 VFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKLDYEKLMTAY 124
VFLEEFR+ +K+E+PN+KAVSAVGKAGGEKWKSLTDAEKAP+EAKAAKRK +YEKLM AY
Sbjct: 108 VFLEEFRQTFKKENPNIKAVSAVGKAGGEKWKSLTDAEKAPYEAKAAKRKSEYEKLMNAY 167
Query: 125 NKKQ 128
NKKQ
Sbjct: 168 NKKQ 171
>gi|1052956|gb|AAC50019.1| high mobility group protein 2 HMG2 [Ipomoea nil]
Length = 146
Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 64/86 (74%), Positives = 74/86 (86%)
Query: 43 TKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAE 102
TK K + KDPNKPKRPPSAFFVF+E+FRK YK++HPN K+V+AVGKAGG+KWK LTDAE
Sbjct: 23 TKKSKKSVKDPNKPKRPPSAFFVFMEDFRKTYKEKHPNNKSVAAVGKAGGDKWKQLTDAE 82
Query: 103 KAPFEAKAAKRKLDYEKLMTAYNKKQ 128
KAPF AKA KRK +YEK M AYN+KQ
Sbjct: 83 KAPFIAKAEKRKQEYEKSMQAYNRKQ 108
>gi|359481661|ref|XP_002279947.2| PREDICTED: high mobility group B protein 1-like [Vitis vinifera]
gi|147815135|emb|CAN74566.1| hypothetical protein VITISV_023651 [Vitis vinifera]
gi|297740214|emb|CBI30396.3| unnamed protein product [Vitis vinifera]
Length = 168
Score = 132 bits (331), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 92/128 (71%), Positives = 109/128 (85%)
Query: 1 MKVTRGKGAVKKDKNEVVKPVEDRAAGKRKAVLKASRSSNKRTKNVKSAKKDPNKPKRPP 60
MK +GKGA ++D E +KP EDR GKRKA +KA +SS + T K AKKDPNKPKRPP
Sbjct: 1 MKAAKGKGAARRDTKEALKPAEDRKIGKRKAAVKAEKSSKRATTKDKKAKKDPNKPKRPP 60
Query: 61 SAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKLDYEKL 120
SAFFVFLEEFRKV+K+E+PNVKAVSAVGKAGGE+WKSL++AEKAP+EAKAAK+K +YEK+
Sbjct: 61 SAFFVFLEEFRKVFKKENPNVKAVSAVGKAGGERWKSLSEAEKAPYEAKAAKKKAEYEKI 120
Query: 121 MTAYNKKQ 128
M AYNKKQ
Sbjct: 121 MNAYNKKQ 128
>gi|449521910|ref|XP_004167972.1| PREDICTED: high mobility group B protein 1-like [Cucumis sativus]
Length = 112
Score = 129 bits (324), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 70/101 (69%), Positives = 81/101 (80%), Gaps = 1/101 (0%)
Query: 1 MKVTRGKGAVKKDKNEVVKPVEDRAAGKRKAVLKASRSSNKRTKNVKSAKKDPNKPKRPP 60
MK ++GKG + K E +KPV+DR GKRKAV+KA + + TK AKKDPNKPKRPP
Sbjct: 1 MKGSKGKGTSRVSK-EALKPVDDRKVGKRKAVVKADKGIKRPTKKDLKAKKDPNKPKRPP 59
Query: 61 SAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDA 101
SAFFVFLEEFRK YK+E+PNVKAVSAVGKAGGEKWKSL+ A
Sbjct: 60 SAFFVFLEEFRKEYKRENPNVKAVSAVGKAGGEKWKSLSHA 100
>gi|2894109|emb|CAA05365.1| high mobility group protein [Solanum tuberosum]
Length = 141
Score = 128 bits (322), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 60/85 (70%), Positives = 73/85 (85%)
Query: 43 TKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAE 102
+K K+A KDPNKPKRPPSAFFVF+EEFRK YK++HPN K+V+ VGKAGG+KWK L+D E
Sbjct: 23 SKKAKNAAKDPNKPKRPPSAFFVFMEEFRKTYKEKHPNNKSVAVVGKAGGDKWKQLSDEE 82
Query: 103 KAPFEAKAAKRKLDYEKLMTAYNKK 127
KAP++AKA KRK +Y+K M AYNKK
Sbjct: 83 KAPYQAKAEKRKAEYQKNMDAYNKK 107
>gi|729736|sp|P40619.1|HMGL_IPONI RecName: Full=HMG1/2-like protein
Length = 144
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 62/86 (72%), Positives = 72/86 (83%)
Query: 43 TKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAE 102
TK K A KDPNKPKRPPSAFFVF+E+FRK YK++HPN K+V+ VGKAGG+KWK LT AE
Sbjct: 23 TKKTKKAVKDPNKPKRPPSAFFVFMEDFRKTYKEKHPNNKSVAVVGKAGGDKWKQLTAAE 82
Query: 103 KAPFEAKAAKRKLDYEKLMTAYNKKQ 128
KAPF +KA KRK +YEK + AYNKKQ
Sbjct: 83 KAPFISKAEKRKQEYEKNLQAYNKKQ 108
>gi|356508616|ref|XP_003523051.1| PREDICTED: HMG1/2-like protein-like [Glycine max]
Length = 152
Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 60/80 (75%), Positives = 71/80 (88%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEA 108
A KDPNKPKRPPSAFFVF+EEFRKV+ +EHP+ KAVSAVGKA G KWK+++DAEKAP+ A
Sbjct: 37 AAKDPNKPKRPPSAFFVFMEEFRKVFNKEHPDNKAVSAVGKAAGAKWKTMSDAEKAPYVA 96
Query: 109 KAAKRKLDYEKLMTAYNKKQ 128
K+ KRK++YEK M AYNKKQ
Sbjct: 97 KSEKRKVEYEKNMRAYNKKQ 116
>gi|118484838|gb|ABK94286.1| unknown [Populus trichocarpa]
Length = 144
Score = 126 bits (316), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 61/85 (71%), Positives = 71/85 (83%)
Query: 43 TKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAE 102
TK K A KDPNKPKRP SAFFVF+E+FRK YK+ HPN K+V+AVGKAGG+KWKSL++AE
Sbjct: 26 TKASKKAAKDPNKPKRPASAFFVFMEDFRKQYKESHPNNKSVAAVGKAGGDKWKSLSEAE 85
Query: 103 KAPFEAKAAKRKLDYEKLMTAYNKK 127
KAPF AKA KRK +Y K M AYNK+
Sbjct: 86 KAPFAAKAEKRKFEYNKDMAAYNKR 110
>gi|357640485|gb|AET87126.1| high mobility group B2 protein [Brassica napus]
Length = 145
Score = 125 bits (315), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 58/76 (76%), Positives = 69/76 (90%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPNKPKRP SAFFVF+E+FR+ YK++HPN K+V+AVGKAGGEKWKSL+D+EKAPF AKA
Sbjct: 34 DPNKPKRPASAFFVFMEDFRQTYKKDHPNNKSVAAVGKAGGEKWKSLSDSEKAPFVAKAD 93
Query: 112 KRKLDYEKLMTAYNKK 127
KRK++YEK M AYNKK
Sbjct: 94 KRKVEYEKTMKAYNKK 109
>gi|224083306|ref|XP_002306980.1| high mobility group family [Populus trichocarpa]
gi|222856429|gb|EEE93976.1| high mobility group family [Populus trichocarpa]
Length = 160
Score = 125 bits (315), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 60/80 (75%), Positives = 71/80 (88%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEA 108
A KDPNKPKRP SAFFVF+EEFR+ YK+EHP K+V+AVGKAGG+KWKSL++AEKAPF A
Sbjct: 37 AAKDPNKPKRPASAFFVFMEEFREQYKREHPKNKSVAAVGKAGGDKWKSLSEAEKAPFVA 96
Query: 109 KAAKRKLDYEKLMTAYNKKQ 128
KA KRK++YEK M AYNK+Q
Sbjct: 97 KADKRKVEYEKKMKAYNKEQ 116
>gi|79318295|ref|NP_001031075.1| high mobility group B3 protein [Arabidopsis thaliana]
gi|332191889|gb|AEE30010.1| high mobility group B3 protein [Arabidopsis thaliana]
Length = 147
Score = 125 bits (314), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 61/84 (72%), Positives = 71/84 (84%)
Query: 44 KNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEK 103
K K A KDPNKPKRP SAFFVF+E+FR YK+EHP K+V+AVGKAGGEKWKSL+D+EK
Sbjct: 23 KGAKGAAKDPNKPKRPSSAFFVFMEDFRVTYKEEHPKNKSVAAVGKAGGEKWKSLSDSEK 82
Query: 104 APFEAKAAKRKLDYEKLMTAYNKK 127
AP+ AKA KRK++YEK M AYNKK
Sbjct: 83 APYVAKADKRKVEYEKNMKAYNKK 106
>gi|145323962|ref|NP_001077570.1| high mobility group B3 protein [Arabidopsis thaliana]
gi|332191890|gb|AEE30011.1| high mobility group B3 protein [Arabidopsis thaliana]
Length = 140
Score = 125 bits (314), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 61/84 (72%), Positives = 71/84 (84%)
Query: 44 KNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEK 103
K K A KDPNKPKRP SAFFVF+E+FR YK+EHP K+V+AVGKAGGEKWKSL+D+EK
Sbjct: 23 KGAKGAAKDPNKPKRPSSAFFVFMEDFRVTYKEEHPKNKSVAAVGKAGGEKWKSLSDSEK 82
Query: 104 APFEAKAAKRKLDYEKLMTAYNKK 127
AP+ AKA KRK++YEK M AYNKK
Sbjct: 83 APYVAKADKRKVEYEKNMKAYNKK 106
>gi|351725567|ref|NP_001236841.1| HMG1/2-like protein [Glycine max]
gi|123379|sp|P26585.1|HMGL_SOYBN RecName: Full=HMG1/2-like protein; AltName: Full=Protein SB11
gi|18645|emb|CAA41200.1| HMG-1 like protein gene [Glycine max]
Length = 152
Score = 125 bits (314), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 60/80 (75%), Positives = 70/80 (87%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEA 108
A KDPNKPKRPPSAFFVF+EEFRKV+ +EHP KAVSAVGKA G KWK+++DAEKAP+ A
Sbjct: 37 AAKDPNKPKRPPSAFFVFMEEFRKVFNKEHPENKAVSAVGKAAGAKWKTMSDAEKAPYVA 96
Query: 109 KAAKRKLDYEKLMTAYNKKQ 128
K+ KRK++YEK M AYNKKQ
Sbjct: 97 KSEKRKVEYEKNMRAYNKKQ 116
>gi|297845042|ref|XP_002890402.1| hypothetical protein ARALYDRAFT_472304 [Arabidopsis lyrata subsp.
lyrata]
gi|297336244|gb|EFH66661.1| hypothetical protein ARALYDRAFT_472304 [Arabidopsis lyrata subsp.
lyrata]
Length = 141
Score = 125 bits (313), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 62/87 (71%), Positives = 73/87 (83%)
Query: 41 KRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTD 100
K K K A KDPNKPKRP SAFFVF+E+FR+ YK+EHP K+V+AVGKAGGEKWKSL+D
Sbjct: 22 KPAKGGKGAAKDPNKPKRPSSAFFVFMEDFRETYKKEHPKNKSVAAVGKAGGEKWKSLSD 81
Query: 101 AEKAPFEAKAAKRKLDYEKLMTAYNKK 127
+EKAP+ AKA KRK++YEK M AYNKK
Sbjct: 82 SEKAPYVAKADKRKVEYEKNMKAYNKK 108
>gi|18394900|ref|NP_564124.1| high mobility group B3 protein [Arabidopsis thaliana]
gi|75220405|sp|P93047.1|HMGB3_ARATH RecName: Full=High mobility group B protein 3; AltName: Full=High
mobility group protein B 2; Short=AtHMGbeta2; Short=HMG
beta 2; AltName: Full=Nucleosome/chromatin assembly
factor group D 03; Short=Nucleosome/chromatin assembly
factor group D 3
gi|15724174|gb|AAL06479.1|AF411789_1 At1g20690/F2D10_15 [Arabidopsis thaliana]
gi|1694976|emb|CAA70691.1| HMG1 [Arabidopsis thaliana]
gi|2832361|emb|CAA74402.1| HMG protein [Arabidopsis thaliana]
gi|20453325|gb|AAM19901.1| At1g20690/F2D10_15 [Arabidopsis thaliana]
gi|21537072|gb|AAM61413.1| unknown [Arabidopsis thaliana]
gi|22530942|gb|AAM96975.1| expressed protein [Arabidopsis thaliana]
gi|23198424|gb|AAN15739.1| expressed protein [Arabidopsis thaliana]
gi|332191888|gb|AEE30009.1| high mobility group B3 protein [Arabidopsis thaliana]
Length = 141
Score = 125 bits (313), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 62/87 (71%), Positives = 72/87 (82%)
Query: 41 KRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTD 100
K K K A KDPNKPKRP SAFFVF+E+FR YK+EHP K+V+AVGKAGGEKWKSL+D
Sbjct: 20 KPAKGAKGAAKDPNKPKRPSSAFFVFMEDFRVTYKEEHPKNKSVAAVGKAGGEKWKSLSD 79
Query: 101 AEKAPFEAKAAKRKLDYEKLMTAYNKK 127
+EKAP+ AKA KRK++YEK M AYNKK
Sbjct: 80 SEKAPYVAKADKRKVEYEKNMKAYNKK 106
>gi|22135473|gb|AAM93217.1|AF527616_1 nucleasome/chromatin assembly factor D protein NFD101 [Zea mays]
gi|2196672|emb|CAA70045.1| HMGd1 [Zea mays]
gi|194698578|gb|ACF83373.1| unknown [Zea mays]
gi|414886616|tpg|DAA62630.1| TPA: HMG-like nucleosome/chromatin assembly factor D [Zea mays]
Length = 126
Score = 125 bits (313), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 63/93 (67%), Positives = 76/93 (81%), Gaps = 4/93 (4%)
Query: 36 SRSSNKRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKW 95
SR S ++TK A+KDPNKPKRPPSAFFVF+EEFRK YK++HPNVK VS +GKAGG+KW
Sbjct: 12 SRLSVRKTK----AEKDPNKPKRPPSAFFVFMEEFRKDYKEKHPNVKQVSVIGKAGGDKW 67
Query: 96 KSLTDAEKAPFEAKAAKRKLDYEKLMTAYNKKQ 128
KSL+DAEKAP+ +KA K K +Y K + AYN KQ
Sbjct: 68 KSLSDAEKAPYVSKAEKLKAEYTKKIDAYNNKQ 100
>gi|414886617|tpg|DAA62631.1| TPA: hypothetical protein ZEAMMB73_230922 [Zea mays]
Length = 119
Score = 124 bits (312), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 63/93 (67%), Positives = 76/93 (81%), Gaps = 4/93 (4%)
Query: 36 SRSSNKRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKW 95
SR S ++TK A+KDPNKPKRPPSAFFVF+EEFRK YK++HPNVK VS +GKAGG+KW
Sbjct: 12 SRLSVRKTK----AEKDPNKPKRPPSAFFVFMEEFRKDYKEKHPNVKQVSVIGKAGGDKW 67
Query: 96 KSLTDAEKAPFEAKAAKRKLDYEKLMTAYNKKQ 128
KSL+DAEKAP+ +KA K K +Y K + AYN KQ
Sbjct: 68 KSLSDAEKAPYVSKAEKLKAEYTKKIDAYNNKQ 100
>gi|224081483|ref|XP_002306429.1| high mobility group family [Populus trichocarpa]
gi|222855878|gb|EEE93425.1| high mobility group family [Populus trichocarpa]
Length = 144
Score = 124 bits (312), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 60/85 (70%), Positives = 71/85 (83%)
Query: 43 TKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAE 102
TK K A KDPNKPKRP SAFFVF+E+FRK YK+ HPN K+V+AVGKAGG+KWKSL++AE
Sbjct: 26 TKASKKAAKDPNKPKRPASAFFVFMEDFRKQYKESHPNNKSVAAVGKAGGDKWKSLSEAE 85
Query: 103 KAPFEAKAAKRKLDYEKLMTAYNKK 127
KAP+ AKA KRK +Y K M AYNK+
Sbjct: 86 KAPYAAKAEKRKFEYNKDMAAYNKR 110
>gi|414886615|tpg|DAA62629.1| TPA: hypothetical protein ZEAMMB73_230922 [Zea mays]
Length = 123
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/93 (67%), Positives = 76/93 (81%), Gaps = 4/93 (4%)
Query: 36 SRSSNKRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKW 95
SR S ++TK A+KDPNKPKRPPSAFFVF+EEFRK YK++HPNVK VS +GKAGG+KW
Sbjct: 12 SRLSVRKTK----AEKDPNKPKRPPSAFFVFMEEFRKDYKEKHPNVKQVSVIGKAGGDKW 67
Query: 96 KSLTDAEKAPFEAKAAKRKLDYEKLMTAYNKKQ 128
KSL+DAEKAP+ +KA K K +Y K + AYN KQ
Sbjct: 68 KSLSDAEKAPYVSKAEKLKAEYTKKIDAYNNKQ 100
>gi|162459697|ref|NP_001105649.1| HMG-like nucleosome/chromatin assembly factor D [Zea mays]
gi|17017392|gb|AAL33650.1|AF440221_1 HMG-like nucleosome/chromatin assembly factor D [Zea mays]
Length = 126
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/93 (67%), Positives = 76/93 (81%), Gaps = 4/93 (4%)
Query: 36 SRSSNKRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKW 95
SR S ++TK A+KDPNKPKRPPSAFFVF+EEFRK YK++HPNVK VS +GKAGG+KW
Sbjct: 12 SRLSVRKTK----AEKDPNKPKRPPSAFFVFMEEFRKDYKEKHPNVKQVSLIGKAGGDKW 67
Query: 96 KSLTDAEKAPFEAKAAKRKLDYEKLMTAYNKKQ 128
KSL+DAEKAP+ +KA K K +Y K + AYN KQ
Sbjct: 68 KSLSDAEKAPYVSKAEKLKAEYTKKIDAYNNKQ 100
>gi|8886929|gb|AAF80615.1|AC069251_8 F2D10.18 [Arabidopsis thaliana]
Length = 662
Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 62/87 (71%), Positives = 72/87 (82%)
Query: 41 KRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTD 100
K K K A KDPNKPKRP SAFFVF+E+FR YK+EHP K+V+AVGKAGGEKWKSL+D
Sbjct: 541 KPAKGAKGAAKDPNKPKRPSSAFFVFMEDFRVTYKEEHPKNKSVAAVGKAGGEKWKSLSD 600
Query: 101 AEKAPFEAKAAKRKLDYEKLMTAYNKK 127
+EKAP+ AKA KRK++YEK M AYNKK
Sbjct: 601 SEKAPYVAKADKRKVEYEKNMKAYNKK 627
Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 54/81 (66%), Positives = 70/81 (86%)
Query: 47 KSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPF 106
K+A KDPNKPKRP SAFFVF+E+FR+ +K+E+P K+V+ VGKA G+KWKSL+D+EKAP+
Sbjct: 406 KAAAKDPNKPKRPASAFFVFMEDFRETFKKENPKNKSVATVGKAAGDKWKSLSDSEKAPY 465
Query: 107 EAKAAKRKLDYEKLMTAYNKK 127
AKA KRK++YEK + AYNKK
Sbjct: 466 VAKAEKRKVEYEKNIKAYNKK 486
>gi|115480551|ref|NP_001063869.1| Os09g0551600 [Oryza sativa Japonica Group]
gi|50726318|dbj|BAD33893.1| putative HMGd1 [Oryza sativa Japonica Group]
gi|113632102|dbj|BAF25783.1| Os09g0551600 [Oryza sativa Japonica Group]
gi|213959176|gb|ACJ54922.1| HMG type nucleosome/chromatin assembly factor [Oryza sativa
Japonica Group]
gi|215694881|dbj|BAG90072.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 127
Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 62/93 (66%), Positives = 75/93 (80%), Gaps = 4/93 (4%)
Query: 36 SRSSNKRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKW 95
SR S ++TK A+KDPNKPKRPPSAFFVF+E+FRK YK++HPNVK VS +GKAGG+KW
Sbjct: 12 SRLSVRKTK----AEKDPNKPKRPPSAFFVFMEQFRKDYKEKHPNVKQVSVIGKAGGDKW 67
Query: 96 KSLTDAEKAPFEAKAAKRKLDYEKLMTAYNKKQ 128
KS+TDA+KAPF KA K K +Y K + AYN KQ
Sbjct: 68 KSMTDADKAPFVTKAEKLKAEYTKKIDAYNNKQ 100
>gi|414886614|tpg|DAA62628.1| TPA: hypothetical protein ZEAMMB73_230922 [Zea mays]
Length = 118
Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/93 (67%), Positives = 76/93 (81%), Gaps = 4/93 (4%)
Query: 36 SRSSNKRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKW 95
SR S ++TK A+KDPNKPKRPPSAFFVF+EEFRK YK++HPNVK VS +GKAGG+KW
Sbjct: 12 SRLSVRKTK----AEKDPNKPKRPPSAFFVFMEEFRKDYKEKHPNVKQVSVIGKAGGDKW 67
Query: 96 KSLTDAEKAPFEAKAAKRKLDYEKLMTAYNKKQ 128
KSL+DAEKAP+ +KA K K +Y K + AYN KQ
Sbjct: 68 KSLSDAEKAPYVSKAEKLKAEYTKKIDAYNNKQ 100
>gi|414590133|tpg|DAA40704.1| TPA: hypothetical protein ZEAMMB73_374315 [Zea mays]
Length = 140
Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/93 (65%), Positives = 75/93 (80%), Gaps = 4/93 (4%)
Query: 36 SRSSNKRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKW 95
SR S ++TK +KDPNKPKRPP+AFFVF+EEFRK YK++HPNVK VS +GKAGG+ W
Sbjct: 32 SRLSVRKTK----VEKDPNKPKRPPTAFFVFMEEFRKDYKEKHPNVKQVSVIGKAGGDMW 87
Query: 96 KSLTDAEKAPFEAKAAKRKLDYEKLMTAYNKKQ 128
KSL+DAEKAP+ +KA K K++Y K M AYN KQ
Sbjct: 88 KSLSDAEKAPYVSKAEKLKVEYTKKMDAYNNKQ 120
>gi|2196548|gb|AAB61215.1| DNA-binding protein [Nicotiana tabacum]
Length = 142
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 56/77 (72%), Positives = 69/77 (89%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPNKPKRPPSAFFVF+EEFRK YK++HPN K+V+AVGKAGG+ WK L++AEKAP++AKA
Sbjct: 32 DPNKPKRPPSAFFVFMEEFRKTYKEKHPNNKSVAAVGKAGGDAWKKLSEAEKAPYQAKAE 91
Query: 112 KRKLDYEKLMTAYNKKQ 128
KRK +Y+K M AYN+KQ
Sbjct: 92 KRKAEYQKNMDAYNRKQ 108
>gi|238013344|gb|ACR37707.1| unknown [Zea mays]
gi|414590135|tpg|DAA40706.1| TPA: HMG1/2-like protein [Zea mays]
Length = 127
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/93 (65%), Positives = 75/93 (80%), Gaps = 4/93 (4%)
Query: 36 SRSSNKRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKW 95
SR S ++TK +KDPNKPKRPP+AFFVF+EEFRK YK++HPNVK VS +GKAGG+ W
Sbjct: 12 SRLSVRKTK----VEKDPNKPKRPPTAFFVFMEEFRKDYKEKHPNVKQVSVIGKAGGDMW 67
Query: 96 KSLTDAEKAPFEAKAAKRKLDYEKLMTAYNKKQ 128
KSL+DAEKAP+ +KA K K++Y K M AYN KQ
Sbjct: 68 KSLSDAEKAPYVSKAEKLKVEYTKKMDAYNNKQ 100
>gi|414590134|tpg|DAA40705.1| TPA: hypothetical protein ZEAMMB73_374315 [Zea mays]
Length = 120
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 61/93 (65%), Positives = 75/93 (80%), Gaps = 4/93 (4%)
Query: 36 SRSSNKRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKW 95
SR S ++TK +KDPNKPKRPP+AFFVF+EEFRK YK++HPNVK VS +GKAGG+ W
Sbjct: 12 SRLSVRKTK----VEKDPNKPKRPPTAFFVFMEEFRKDYKEKHPNVKQVSVIGKAGGDMW 67
Query: 96 KSLTDAEKAPFEAKAAKRKLDYEKLMTAYNKKQ 128
KSL+DAEKAP+ +KA K K++Y K M AYN KQ
Sbjct: 68 KSLSDAEKAPYVSKAEKLKVEYTKKMDAYNNKQ 100
>gi|351725757|ref|NP_001235312.1| uncharacterized protein LOC100499992 [Glycine max]
gi|255628371|gb|ACU14530.1| unknown [Glycine max]
Length = 139
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 58/84 (69%), Positives = 71/84 (84%)
Query: 44 KNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEK 103
K + A KDPNKPKRPPSAFFVF+ EFR+ +K+EHPN K+V+ VGKAGGEKWKSL+DAEK
Sbjct: 25 KQSRKAAKDPNKPKRPPSAFFVFMSEFREQFKKEHPNNKSVAVVGKAGGEKWKSLSDAEK 84
Query: 104 APFEAKAAKRKLDYEKLMTAYNKK 127
APF A A K+K +YEK ++AYNK+
Sbjct: 85 APFVATAEKKKQEYEKTISAYNKQ 108
>gi|388504718|gb|AFK40425.1| unknown [Lotus japonicus]
Length = 152
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/80 (73%), Positives = 69/80 (86%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEA 108
A KDPNKPKRPPSAFFVF+E+FRK++ +E+P KAVSAVGKA G KWKS+++AEKAP+ A
Sbjct: 37 AAKDPNKPKRPPSAFFVFMEDFRKIFNKENPENKAVSAVGKAAGAKWKSMSEAEKAPYVA 96
Query: 109 KAAKRKLDYEKLMTAYNKKQ 128
KA KRK DYEK M AYNKKQ
Sbjct: 97 KAEKRKADYEKTMKAYNKKQ 116
>gi|312281681|dbj|BAJ33706.1| unnamed protein product [Thellungiella halophila]
Length = 144
Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 59/81 (72%), Positives = 71/81 (87%)
Query: 47 KSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPF 106
K+A KDPNKPKRP SAFFVF+E+FR+ +K+EHP K+V+AVGKA G+KWKSL+DAEKAP+
Sbjct: 29 KAAAKDPNKPKRPASAFFVFMEDFRETFKKEHPKNKSVAAVGKAAGDKWKSLSDAEKAPY 88
Query: 107 EAKAAKRKLDYEKLMTAYNKK 127
AKA KRK+DYEK M AYNKK
Sbjct: 89 VAKAEKRKVDYEKNMKAYNKK 109
>gi|226505018|ref|NP_001151148.1| LOC100284781 [Zea mays]
gi|195644628|gb|ACG41782.1| HMG1/2-like protein [Zea mays]
Length = 127
Score = 122 bits (305), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 60/93 (64%), Positives = 74/93 (79%), Gaps = 4/93 (4%)
Query: 36 SRSSNKRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKW 95
SR S ++TK +KDPNKPKRPP+ FFVF+EEFRK YK++HPNVK VS +GKAGG+ W
Sbjct: 12 SRLSVRKTK----VEKDPNKPKRPPTTFFVFMEEFRKDYKEKHPNVKQVSVIGKAGGDMW 67
Query: 96 KSLTDAEKAPFEAKAAKRKLDYEKLMTAYNKKQ 128
KSL+DAEKAP+ +KA K K++Y K M AYN KQ
Sbjct: 68 KSLSDAEKAPYVSKAEKLKVEYTKKMDAYNNKQ 100
>gi|225457566|ref|XP_002272299.1| PREDICTED: high mobility group-like isoform 1 [Vitis vinifera]
gi|359491843|ref|XP_003634333.1| PREDICTED: high mobility group-like isoform 2 [Vitis vinifera]
gi|297745562|emb|CBI40727.3| unnamed protein product [Vitis vinifera]
Length = 153
Score = 122 bits (305), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 57/77 (74%), Positives = 69/77 (89%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPNKPKRP SAFFVF+EEFRK YK++HP+ K+VS VGKAGG+KWKS+++AEKAP+ AKA
Sbjct: 40 DPNKPKRPASAFFVFMEEFRKQYKEKHPSNKSVSVVGKAGGDKWKSMSEAEKAPYVAKAE 99
Query: 112 KRKLDYEKLMTAYNKKQ 128
KRK++YEK M AYNKKQ
Sbjct: 100 KRKVEYEKNMKAYNKKQ 116
>gi|449455609|ref|XP_004145545.1| PREDICTED: HMG1/2-like protein-like [Cucumis sativus]
gi|449511984|ref|XP_004164108.1| PREDICTED: HMG1/2-like protein-like isoform 1 [Cucumis sativus]
gi|449511988|ref|XP_004164109.1| PREDICTED: HMG1/2-like protein-like isoform 2 [Cucumis sativus]
Length = 146
Score = 122 bits (305), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 58/77 (75%), Positives = 68/77 (88%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPNKPKRP SAFFVF+EEFRK + +E+PN KAVSAVGKA G+KWKS++DAEKAP+ AKA
Sbjct: 35 DPNKPKRPASAFFVFMEEFRKKFNEENPNNKAVSAVGKAAGQKWKSMSDAEKAPYIAKAD 94
Query: 112 KRKLDYEKLMTAYNKKQ 128
KRK++YEK M AYNKKQ
Sbjct: 95 KRKVEYEKNMKAYNKKQ 111
>gi|168028752|ref|XP_001766891.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681870|gb|EDQ68293.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 160
Score = 121 bits (304), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 66/125 (52%), Positives = 89/125 (71%), Gaps = 4/125 (3%)
Query: 5 RGKGAV-KKDKNEVVKPVEDRAAGKRKAVLKASRSSNKRTKNVKSAKKDPNKPKRPPSAF 63
+G GAV K+D E V V+D+ KRK +K + R KDPN PKRP +AF
Sbjct: 8 KGVGAVAKRDVKEKVTKVQDKDIKKRKGPVKEPKG---RKAKSAKKAKDPNAPKRPATAF 64
Query: 64 FVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKLDYEKLMTA 123
F+FL EFR+V+K+E+PNVK V+AVGKAGGEKWKS+++AEK P+ KA ++K +Y+K ++A
Sbjct: 65 FIFLNEFREVFKKENPNVKGVAAVGKAGGEKWKSMSEAEKQPYMQKAVQKKSEYDKTLSA 124
Query: 124 YNKKQ 128
YNKKQ
Sbjct: 125 YNKKQ 129
>gi|308569658|gb|ADO34794.1| high mobility group box 4 protein [Gossypium hirsutum]
Length = 148
Score = 121 bits (304), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 58/77 (75%), Positives = 68/77 (88%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPNKPKRP SAFFVF+EEFR+ YK+EHP K+V+AVGKAGGEKWKSL+DAEKAP+ AKA
Sbjct: 35 DPNKPKRPASAFFVFMEEFREQYKKEHPKNKSVAAVGKAGGEKWKSLSDAEKAPYIAKAE 94
Query: 112 KRKLDYEKLMTAYNKKQ 128
KRK++YEK M AY K+Q
Sbjct: 95 KRKVEYEKNMKAYTKRQ 111
>gi|148250187|gb|ABQ53545.1| HMG1 protein [Arachis diogoi]
Length = 141
Score = 121 bits (303), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 59/80 (73%), Positives = 67/80 (83%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEA 108
A KDPNKPKRPPSAFFVF+EEFRK + ++HP KAVSAVGKA G KWK ++DAEKAP+ A
Sbjct: 26 AAKDPNKPKRPPSAFFVFMEEFRKQFNKDHPENKAVSAVGKAAGAKWKQMSDAEKAPYVA 85
Query: 109 KAAKRKLDYEKLMTAYNKKQ 128
K+ KRK DYEK M AYNKKQ
Sbjct: 86 KSEKRKQDYEKNMRAYNKKQ 105
>gi|116790306|gb|ABK25570.1| unknown [Picea sitchensis]
gi|224286844|gb|ACN41125.1| unknown [Picea sitchensis]
gi|294461904|gb|ADE76508.1| unknown [Picea sitchensis]
Length = 151
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 56/76 (73%), Positives = 66/76 (86%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPNKPKRPPSAFFVFL+EFRK YKQ +PN +VSAVGKAGGEKW++L+DAEKAP+ AKA
Sbjct: 42 DPNKPKRPPSAFFVFLDEFRKEYKQANPNANSVSAVGKAGGEKWRALSDAEKAPYVAKAE 101
Query: 112 KRKLDYEKLMTAYNKK 127
K+K +YEK M YNK+
Sbjct: 102 KKKAEYEKSMATYNKQ 117
>gi|295913393|gb|ADG57949.1| transcription factor [Lycoris longituba]
Length = 162
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/76 (75%), Positives = 67/76 (88%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPNKPKRPPSAFFVF+EEFRK +K+++PN K VS VGKA G+KWKS++ AEKAP+EAKAA
Sbjct: 42 DPNKPKRPPSAFFVFMEEFRKQFKEKNPNNKQVSVVGKAAGDKWKSMSAAEKAPYEAKAA 101
Query: 112 KRKLDYEKLMTAYNKK 127
KRK+DY K M AYNKK
Sbjct: 102 KRKVDYNKTMVAYNKK 117
>gi|295913696|gb|ADG58089.1| transcription factor [Lycoris longituba]
Length = 183
Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/76 (75%), Positives = 67/76 (88%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPNKPKRPPSAFFVF+EEFRK +K+++PN K VS VGKA G+KWKS++ AEKAP+EAKAA
Sbjct: 63 DPNKPKRPPSAFFVFMEEFRKQFKEKNPNNKQVSVVGKAAGDKWKSMSAAEKAPYEAKAA 122
Query: 112 KRKLDYEKLMTAYNKK 127
KRK+DY K M AYNKK
Sbjct: 123 KRKVDYNKTMVAYNKK 138
>gi|116781378|gb|ABK22074.1| unknown [Picea sitchensis]
gi|224284710|gb|ACN40086.1| unknown [Picea sitchensis]
Length = 154
Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/97 (60%), Positives = 77/97 (79%), Gaps = 1/97 (1%)
Query: 32 VLKASRSSNKRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAG 91
+L A NKR K A KDPN+PKRPP+AFFV+LEEFRK +KQ+HP+VK V+AVGKA
Sbjct: 25 LLSAKEKPNKRQAKPK-AVKDPNQPKRPPTAFFVYLEEFRKTFKQKHPDVKGVTAVGKAC 83
Query: 92 GEKWKSLTDAEKAPFEAKAAKRKLDYEKLMTAYNKKQ 128
G+KWK +++AEKAP+ AKAA+++ +Y+ MTAY KKQ
Sbjct: 84 GDKWKEMSEAEKAPYLAKAAQKRAEYDVTMTAYKKKQ 120
>gi|157382900|gb|ABV48885.1| high mobility group protein B3 [Physcomitrella patens]
Length = 158
Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/113 (53%), Positives = 84/113 (74%), Gaps = 3/113 (2%)
Query: 16 EVVKPVEDRAAGKRKAVLKASRSSNKRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYK 75
E V V+D+ KRK +K +++ + KDPN PKRPP+AFF+FL EFR+V+K
Sbjct: 16 ERVPKVQDKDIKKRKGAVKETKAKKPKGG---KKLKDPNAPKRPPTAFFIFLNEFREVFK 72
Query: 76 QEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKLDYEKLMTAYNKKQ 128
+E+PNVK V+AVGKAGGEKWKS+++AEK PF KA ++K +Y+K ++AYNKKQ
Sbjct: 73 RENPNVKGVTAVGKAGGEKWKSMSEAEKQPFMTKAVQKKSEYDKTISAYNKKQ 125
>gi|388497528|gb|AFK36830.1| unknown [Medicago truncatula]
Length = 155
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 58/78 (74%), Positives = 69/78 (88%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPNKPKRPPSAFFVF+E+FRK +K+++P+ KAVSAVGKA G KWKSL++AEKAP+ AKA
Sbjct: 40 KDPNKPKRPPSAFFVFMEDFRKQFKKDNPDNKAVSAVGKAAGAKWKSLSEAEKAPYAAKA 99
Query: 111 AKRKLDYEKLMTAYNKKQ 128
KRK +YEK M AYNKKQ
Sbjct: 100 EKRKAEYEKTMKAYNKKQ 117
>gi|388497036|gb|AFK36584.1| unknown [Medicago truncatula]
Length = 155
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 58/78 (74%), Positives = 69/78 (88%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPNKPKRPPSAFFVF+E+FRK +K+++P+ KAVSAVGKA G KWKSL++AEKAP+ AKA
Sbjct: 40 KDPNKPKRPPSAFFVFMEDFRKQFKKDNPDNKAVSAVGKAAGAKWKSLSEAEKAPYAAKA 99
Query: 111 AKRKLDYEKLMTAYNKKQ 128
KRK +YEK M AYNKKQ
Sbjct: 100 EKRKAEYEKTMKAYNKKQ 117
>gi|308569654|gb|ADO34793.1| high mobility group box 2 protein [Gossypium hirsutum]
Length = 146
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/92 (65%), Positives = 74/92 (80%)
Query: 37 RSSNKRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWK 96
+S+ K K A KDPNKPKRP SAFFVF+EEFR+ YK+EHP K+V+AVGKAGG+KWK
Sbjct: 20 KSTTKAGKKSGKAAKDPNKPKRPASAFFVFMEEFREQYKKEHPKNKSVAAVGKAGGDKWK 79
Query: 97 SLTDAEKAPFEAKAAKRKLDYEKLMTAYNKKQ 128
SL++AEK P+ KA KRK++YEK M AYNK+Q
Sbjct: 80 SLSEAEKRPYVDKAEKRKVEYEKNMKAYNKRQ 111
>gi|357159916|ref|XP_003578598.1| PREDICTED: HMG1/2-like protein-like [Brachypodium distachyon]
Length = 128
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/93 (66%), Positives = 73/93 (78%), Gaps = 4/93 (4%)
Query: 36 SRSSNKRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKW 95
SR S ++TK A+KDPN+PKRPPSAFFVF+E FRK YK++HP+VK VS VGKAGG +W
Sbjct: 12 SRLSVRKTK----AEKDPNQPKRPPSAFFVFMEGFRKDYKEKHPDVKQVSVVGKAGGAEW 67
Query: 96 KSLTDAEKAPFEAKAAKRKLDYEKLMTAYNKKQ 128
KSL+DAEKAPF AKA K K +Y K M AYN Q
Sbjct: 68 KSLSDAEKAPFVAKAEKLKAEYNKKMVAYNNPQ 100
>gi|304651500|gb|ADM47612.1| high mobility group protein [Hevea brasiliensis]
Length = 146
Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 58/80 (72%), Positives = 70/80 (87%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEA 108
A KDPNKPKRP SAFFVF+EEFR+ YK+EHP K+V+AVGKAGG+KWKSL++AEKAP+ A
Sbjct: 32 AAKDPNKPKRPASAFFVFMEEFREQYKKEHPKNKSVAAVGKAGGDKWKSLSEAEKAPYVA 91
Query: 109 KAAKRKLDYEKLMTAYNKKQ 128
KA KRK++YEK + AYNK Q
Sbjct: 92 KAEKRKVEYEKKLKAYNKGQ 111
>gi|168032698|ref|XP_001768855.1| predicted protein [Physcomitrella patens subsp. patens]
gi|168032700|ref|XP_001768856.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679967|gb|EDQ66408.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679968|gb|EDQ66409.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 110
Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 53/78 (67%), Positives = 69/78 (88%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPP+AFF+FL EFR+V+K+E+PNVK V+AVGKAGGEKWKS+++AEK PF KA
Sbjct: 7 KDPNAPKRPPTAFFIFLNEFREVFKRENPNVKGVTAVGKAGGEKWKSMSEAEKQPFMTKA 66
Query: 111 AKRKLDYEKLMTAYNKKQ 128
++K +Y+K ++AYNKKQ
Sbjct: 67 VQKKSEYDKTISAYNKKQ 84
>gi|449456873|ref|XP_004146173.1| PREDICTED: HMG1/2-like protein-like [Cucumis sativus]
gi|449495123|ref|XP_004159740.1| PREDICTED: HMG1/2-like protein-like [Cucumis sativus]
gi|63020536|gb|AAY26151.1| high mobility group protein [Cucumis sativus]
Length = 146
Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/76 (73%), Positives = 66/76 (86%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPNKPKRP SAFFVF+EEFRK YK+EHPN K+V+AVGKAGG+KWKS++DAEKAP+ KA
Sbjct: 34 DPNKPKRPASAFFVFMEEFRKQYKKEHPNNKSVAAVGKAGGDKWKSMSDAEKAPYINKAE 93
Query: 112 KRKLDYEKLMTAYNKK 127
KRK +Y K M AYNK+
Sbjct: 94 KRKTEYNKSMQAYNKR 109
>gi|295913307|gb|ADG57910.1| transcription factor [Lycoris longituba]
Length = 138
Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/76 (75%), Positives = 67/76 (88%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPNKPKRPPSAFFVF+EEFRK +K+++PN K VS VGKA G+KWKS++ AEKAP+EAKAA
Sbjct: 18 DPNKPKRPPSAFFVFMEEFRKQFKEKNPNNKQVSVVGKAAGDKWKSMSAAEKAPYEAKAA 77
Query: 112 KRKLDYEKLMTAYNKK 127
KRK+DY K M AYNKK
Sbjct: 78 KRKVDYNKTMVAYNKK 93
>gi|308569660|gb|ADO34795.1| high mobility group box 1 protein [Gossypium hirsutum]
Length = 142
Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/77 (72%), Positives = 69/77 (89%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPNKPKRP SAFFVF+EEFR+ YK++HP K+V+AVGKAGG+KWKSL++AEKAP+ AKA
Sbjct: 31 DPNKPKRPASAFFVFMEEFREQYKKDHPKNKSVAAVGKAGGDKWKSLSEAEKAPYVAKAE 90
Query: 112 KRKLDYEKLMTAYNKKQ 128
KRK++YEK M AYNK+Q
Sbjct: 91 KRKVEYEKNMKAYNKRQ 107
>gi|351723773|ref|NP_001235499.1| uncharacterized protein LOC100305957 [Glycine max]
gi|255627099|gb|ACU13894.1| unknown [Glycine max]
Length = 142
Score = 119 bits (298), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 58/84 (69%), Positives = 69/84 (82%)
Query: 44 KNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEK 103
K K A KDPNKPK PPSAFFVF+ EFR+ +K+EHPN K+V+ VGKAGG+KWKSL+DAEK
Sbjct: 25 KQSKKAAKDPNKPKGPPSAFFVFMSEFREQFKKEHPNNKSVAVVGKAGGDKWKSLSDAEK 84
Query: 104 APFEAKAAKRKLDYEKLMTAYNKK 127
APF A A K+K +YEK + AYNKK
Sbjct: 85 APFVATAEKKKQEYEKTILAYNKK 108
>gi|296088654|emb|CBI37645.3| unnamed protein product [Vitis vinifera]
Length = 154
Score = 119 bits (298), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 60/94 (63%), Positives = 74/94 (78%)
Query: 34 KASRSSNKRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGE 93
K + + K+T + A KDPNKPKRP SAFFVF+EEFRK YK++HP K+VS VGKAGG+
Sbjct: 23 KGAAAVGKKTAKKEKAVKDPNKPKRPASAFFVFMEEFRKQYKEKHPANKSVSVVGKAGGD 82
Query: 94 KWKSLTDAEKAPFEAKAAKRKLDYEKLMTAYNKK 127
KWKSL++AEKAP+ AKA KRK +Y K M AYNK+
Sbjct: 83 KWKSLSEAEKAPYVAKAEKRKTEYNKSMQAYNKR 116
>gi|359476973|ref|XP_002280084.2| PREDICTED: high mobility group B2 protein-like isoform 1 [Vitis
vinifera]
Length = 156
Score = 119 bits (297), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 60/94 (63%), Positives = 74/94 (78%)
Query: 34 KASRSSNKRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGE 93
K + + K+T + A KDPNKPKRP SAFFVF+EEFRK YK++HP K+VS VGKAGG+
Sbjct: 25 KGAAAVGKKTAKKEKAVKDPNKPKRPASAFFVFMEEFRKQYKEKHPANKSVSVVGKAGGD 84
Query: 94 KWKSLTDAEKAPFEAKAAKRKLDYEKLMTAYNKK 127
KWKSL++AEKAP+ AKA KRK +Y K M AYNK+
Sbjct: 85 KWKSLSEAEKAPYVAKAEKRKTEYNKSMQAYNKR 118
>gi|1813329|dbj|BAA19156.1| HMG-1 [Canavalia gladiata]
Length = 141
Score = 119 bits (297), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 57/84 (67%), Positives = 70/84 (83%)
Query: 44 KNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEK 103
K K A KDPNKPKRPPSAFFVF+ EFR+ YK+EHP K+V+ VGKAGG+KWKSL+DAEK
Sbjct: 25 KQSKKAAKDPNKPKRPPSAFFVFMSEFREQYKKEHPTNKSVAVVGKAGGDKWKSLSDAEK 84
Query: 104 APFEAKAAKRKLDYEKLMTAYNKK 127
APF A+A K+K +Y+K + AYN+K
Sbjct: 85 APFVARAEKKKEEYDKSILAYNRK 108
>gi|224065681|ref|XP_002301918.1| high mobility group family [Populus trichocarpa]
gi|222843644|gb|EEE81191.1| high mobility group family [Populus trichocarpa]
Length = 152
Score = 119 bits (297), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 57/77 (74%), Positives = 68/77 (88%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPNKPKRP SAFFVF+EEFR+ YK+EHP K+V+AVGKAGG+KWKSL+ AEKAP+ AKA
Sbjct: 39 DPNKPKRPASAFFVFMEEFREQYKKEHPKNKSVAAVGKAGGDKWKSLSAAEKAPYVAKAD 98
Query: 112 KRKLDYEKLMTAYNKKQ 128
KRK++YEK M AYNK+Q
Sbjct: 99 KRKVEYEKKMKAYNKEQ 115
>gi|157382898|gb|ABV48884.1| high mobility group protein B2 [Physcomitrella patens]
Length = 165
Score = 119 bits (297), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 65/125 (52%), Positives = 90/125 (72%), Gaps = 4/125 (3%)
Query: 5 RGKGAV-KKDKNEVVKPVEDRAAGKRKAVLKASRSSNKRTKNVKSAKKDPNKPKRPPSAF 63
+G GAV K+D E V V+D+ KRK +K + ++ KDPN PKRP +AF
Sbjct: 8 KGVGAVAKRDVKEKVTKVQDKDIKKRKGPVKEPKGGKAKSA---KKAKDPNAPKRPATAF 64
Query: 64 FVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKLDYEKLMTA 123
F+FL EFR+V+K+E+PNVK V+AVGKAGGEKWKS+++AEK P+ KA ++K +Y+K ++A
Sbjct: 65 FIFLNEFREVFKKENPNVKGVAAVGKAGGEKWKSMSEAEKQPYMQKAVQKKSEYDKTLSA 124
Query: 124 YNKKQ 128
YNKKQ
Sbjct: 125 YNKKQ 129
>gi|359476975|ref|XP_003631923.1| PREDICTED: high mobility group B2 protein-like isoform 2 [Vitis
vinifera]
Length = 125
Score = 118 bits (296), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 60/94 (63%), Positives = 74/94 (78%)
Query: 34 KASRSSNKRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGE 93
K + + K+T + A KDPNKPKRP SAFFVF+EEFRK YK++HP K+VS VGKAGG+
Sbjct: 25 KGAAAVGKKTAKKEKAVKDPNKPKRPASAFFVFMEEFRKQYKEKHPANKSVSVVGKAGGD 84
Query: 94 KWKSLTDAEKAPFEAKAAKRKLDYEKLMTAYNKK 127
KWKSL++AEKAP+ AKA KRK +Y K M AYNK+
Sbjct: 85 KWKSLSEAEKAPYVAKAEKRKTEYNKSMQAYNKR 118
>gi|295913700|gb|ADG58091.1| transcription factor [Lycoris longituba]
Length = 162
Score = 118 bits (296), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 56/77 (72%), Positives = 66/77 (85%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPNKPKRPPSAFFVF+EEFRK +K+++PN K VS VGKA G+KWKS++ EKAP+EAKA
Sbjct: 41 KDPNKPKRPPSAFFVFMEEFRKQFKEKNPNNKQVSVVGKAAGDKWKSMSATEKAPYEAKA 100
Query: 111 AKRKLDYEKLMTAYNKK 127
AKRK +Y K M AYNKK
Sbjct: 101 AKRKAEYNKTMVAYNKK 117
>gi|295913475|gb|ADG57987.1| transcription factor [Lycoris longituba]
Length = 162
Score = 118 bits (296), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 56/77 (72%), Positives = 66/77 (85%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPNKPKRPPSAFFVF+EEFRK +K+++PN K VS VGKA G+KWKS++ EKAP+EAKA
Sbjct: 41 KDPNKPKRPPSAFFVFMEEFRKQFKEKNPNNKQVSVVGKAAGDKWKSMSATEKAPYEAKA 100
Query: 111 AKRKLDYEKLMTAYNKK 127
AKRK +Y K M AYNKK
Sbjct: 101 AKRKAEYNKTMVAYNKK 117
>gi|118488125|gb|ABK95882.1| unknown [Populus trichocarpa]
Length = 151
Score = 118 bits (295), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 57/77 (74%), Positives = 68/77 (88%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPNKPKRP SAFFVF+EEFR+ YK+EHP K+V+AVGKAGG+KWKSL+ AEKAP+ AKA
Sbjct: 39 DPNKPKRPASAFFVFMEEFREQYKKEHPKNKSVAAVGKAGGDKWKSLSAAEKAPYVAKAD 98
Query: 112 KRKLDYEKLMTAYNKKQ 128
KRK++YEK M AYNK+Q
Sbjct: 99 KRKVEYEKKMKAYNKEQ 115
>gi|194466165|gb|ACF74313.1| high mobility group protein 2 [Arachis hypogaea]
Length = 153
Score = 118 bits (295), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 58/80 (72%), Positives = 66/80 (82%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEA 108
A KDPNK KRPPSAFFVF+EEFRK + ++HP KAVSAVGKA G KWK ++DAEKAP+ A
Sbjct: 38 AAKDPNKLKRPPSAFFVFMEEFRKQFNKDHPENKAVSAVGKAAGAKWKQMSDAEKAPYVA 97
Query: 109 KAAKRKLDYEKLMTAYNKKQ 128
K+ KRK DYEK M AYNKKQ
Sbjct: 98 KSEKRKQDYEKNMRAYNKKQ 117
>gi|295913708|gb|ADG58095.1| transcription factor [Lycoris longituba]
Length = 190
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 56/77 (72%), Positives = 66/77 (85%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPNKPKRPPSAFFVF+EEFRK +K+++PN K VS VGKA G+KWKS++ EKAP+EAKA
Sbjct: 69 KDPNKPKRPPSAFFVFMEEFRKQFKEKNPNNKQVSVVGKAAGDKWKSMSATEKAPYEAKA 128
Query: 111 AKRKLDYEKLMTAYNKK 127
AKRK +Y K M AYNKK
Sbjct: 129 AKRKAEYNKTMVAYNKK 145
>gi|302754440|ref|XP_002960644.1| hypothetical protein SELMODRAFT_75453 [Selaginella moellendorffii]
gi|300171583|gb|EFJ38183.1| hypothetical protein SELMODRAFT_75453 [Selaginella moellendorffii]
Length = 134
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/77 (66%), Positives = 67/77 (87%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN+PK+P +AFF+FLEEFR+ YK++HP+VK V+A+GKAGG+ WKSL+D EK P+ AKAA
Sbjct: 32 DPNQPKKPATAFFIFLEEFRQTYKKDHPDVKGVAAIGKAGGDMWKSLSDKEKEPYHAKAA 91
Query: 112 KRKLDYEKLMTAYNKKQ 128
KRK DY+K + AYNKK+
Sbjct: 92 KRKADYDKDLEAYNKKK 108
>gi|295913458|gb|ADG57979.1| transcription factor [Lycoris longituba]
Length = 179
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 56/77 (72%), Positives = 66/77 (85%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPNKPKRPPSAFFVF+EEFRK +K+++PN K VS VGKA G+KWKS++ EKAP+EAKA
Sbjct: 59 KDPNKPKRPPSAFFVFMEEFRKQFKEKNPNNKQVSVVGKAAGDKWKSMSATEKAPYEAKA 118
Query: 111 AKRKLDYEKLMTAYNKK 127
AKRK +Y K M AYNKK
Sbjct: 119 AKRKAEYNKTMVAYNKK 135
>gi|47027098|gb|AAT08762.1| HMG transcription factor [Hyacinthus orientalis]
Length = 158
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 56/78 (71%), Positives = 67/78 (85%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPNKPKRPPSAFFVF+E+FRK +K+++PN K VS VGKA KWK+++ AEKAPFEA+A
Sbjct: 38 KDPNKPKRPPSAFFVFMEDFRKQFKEKNPNNKQVSVVGKACWGKWKTMSAAEKAPFEARA 97
Query: 111 AKRKLDYEKLMTAYNKKQ 128
AKRK DY K+M AYNKKQ
Sbjct: 98 AKRKADYNKVMVAYNKKQ 115
>gi|295913526|gb|ADG58011.1| transcription factor [Lycoris longituba]
Length = 171
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 56/77 (72%), Positives = 66/77 (85%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPNKPKRPPSAFFVF+EEFRK +K+++PN K VS VGKA G+KWKS++ EKAP+EAKA
Sbjct: 54 KDPNKPKRPPSAFFVFMEEFRKQFKEKNPNNKQVSVVGKAAGDKWKSMSATEKAPYEAKA 113
Query: 111 AKRKLDYEKLMTAYNKK 127
AKRK +Y K M AYNKK
Sbjct: 114 AKRKAEYNKTMVAYNKK 130
>gi|302803281|ref|XP_002983394.1| hypothetical protein SELMODRAFT_117986 [Selaginella moellendorffii]
gi|300149079|gb|EFJ15736.1| hypothetical protein SELMODRAFT_117986 [Selaginella moellendorffii]
Length = 123
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/77 (66%), Positives = 67/77 (87%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN+PK+P +AFF+FLEEFR+ YK++HP+VK V+A+GKAGG+ WKSL+D EK P+ AKAA
Sbjct: 18 DPNQPKKPATAFFIFLEEFRQTYKKDHPDVKGVAAIGKAGGDMWKSLSDKEKEPYHAKAA 77
Query: 112 KRKLDYEKLMTAYNKKQ 128
KRK DY+K + AYNKK+
Sbjct: 78 KRKADYDKDLEAYNKKK 94
>gi|255539248|ref|XP_002510689.1| DNA-binding protein MNB1B, putative [Ricinus communis]
gi|223551390|gb|EEF52876.1| DNA-binding protein MNB1B, putative [Ricinus communis]
Length = 145
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 54/77 (70%), Positives = 68/77 (88%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPNKPKRP SAFFVF+EEFR+ YK+EHP K+V+AVGKAGG++WKS++++EKAPF AKA
Sbjct: 34 DPNKPKRPASAFFVFMEEFREQYKKEHPKNKSVAAVGKAGGDRWKSMSESEKAPFVAKAE 93
Query: 112 KRKLDYEKLMTAYNKKQ 128
KRK++YEK + AYNK Q
Sbjct: 94 KRKIEYEKKLKAYNKGQ 110
>gi|125564627|gb|EAZ10007.1| hypothetical protein OsI_32309 [Oryza sativa Indica Group]
Length = 139
Score = 115 bits (288), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 62/105 (59%), Positives = 75/105 (71%), Gaps = 16/105 (15%)
Query: 36 SRSSNKRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKW 95
SR S ++TK A+KDPNKPKRPPSAFFVF+E+FRK YK++HPNVK VS +GKAGG+KW
Sbjct: 12 SRLSVRKTK----AEKDPNKPKRPPSAFFVFMEQFRKDYKEKHPNVKQVSVIGKAGGDKW 67
Query: 96 KSLTDA------------EKAPFEAKAAKRKLDYEKLMTAYNKKQ 128
KS+TDA +KAPF KA K K +Y K + AYN KQ
Sbjct: 68 KSMTDAIGGYVVVAVPCKDKAPFVTKAEKLKAEYTKKIDAYNNKQ 112
>gi|222642048|gb|EEE70180.1| hypothetical protein OsJ_30257 [Oryza sativa Japonica Group]
Length = 139
Score = 115 bits (288), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 62/105 (59%), Positives = 75/105 (71%), Gaps = 16/105 (15%)
Query: 36 SRSSNKRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKW 95
SR S ++TK A+KDPNKPKRPPSAFFVF+E+FRK YK++HPNVK VS +GKAGG+KW
Sbjct: 12 SRLSVRKTK----AEKDPNKPKRPPSAFFVFMEQFRKDYKEKHPNVKQVSVIGKAGGDKW 67
Query: 96 KSLTDA------------EKAPFEAKAAKRKLDYEKLMTAYNKKQ 128
KS+TDA +KAPF KA K K +Y K + AYN KQ
Sbjct: 68 KSMTDAIRGYVVVAVPCKDKAPFVTKAEKLKAEYTKKIDAYNNKQ 112
>gi|309243128|gb|ADD74180.2| high mobility group box 3 protein [Gossypium hirsutum]
Length = 139
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/76 (72%), Positives = 64/76 (84%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPNKPKRP SAFFVF+EEFRK YK+ +P+ ++VSAVGKAGGEKWKS+TDAEKAP+ KA
Sbjct: 34 DPNKPKRPASAFFVFMEEFRKQYKEANPDNRSVSAVGKAGGEKWKSMTDAEKAPYVQKAE 93
Query: 112 KRKLDYEKLMTAYNKK 127
KRK +Y K M AYN K
Sbjct: 94 KRKSEYNKKMQAYNLK 109
>gi|436424|emb|CAA54168.1| HMG 1 protein [Pisum sativum]
Length = 154
Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/78 (71%), Positives = 67/78 (85%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPNKPKRPPSAFFVF+E+FRK +K+ + + KAVSAVGKA G KWKS+T+AEKAP+ AKA
Sbjct: 40 KDPNKPKRPPSAFFVFMEDFRKQFKKGNADNKAVSAVGKAAGAKWKSMTEAEKAPYAAKA 99
Query: 111 AKRKLDYEKLMTAYNKKQ 128
KRK +YEK M +YNKKQ
Sbjct: 100 EKRKAEYEKSMKSYNKKQ 117
>gi|79318286|ref|NP_001031074.1| high mobility group B2 protein [Arabidopsis thaliana]
gi|297845040|ref|XP_002890401.1| hypothetical protein ARALYDRAFT_472301 [Arabidopsis lyrata subsp.
lyrata]
gi|297336243|gb|EFH66660.1| hypothetical protein ARALYDRAFT_472301 [Arabidopsis lyrata subsp.
lyrata]
gi|332191886|gb|AEE30007.1| high mobility group B2 protein [Arabidopsis thaliana]
Length = 142
Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/81 (66%), Positives = 70/81 (86%)
Query: 47 KSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPF 106
K+A KDPNKPKRP SAFFVF+E+FR+ +K+E+P K+V+ VGKA G+KWKSL+D+EKAP+
Sbjct: 29 KAAAKDPNKPKRPASAFFVFMEDFRETFKKENPKNKSVATVGKAAGDKWKSLSDSEKAPY 88
Query: 107 EAKAAKRKLDYEKLMTAYNKK 127
AKA KRK++YEK + AYNKK
Sbjct: 89 VAKAEKRKVEYEKNIKAYNKK 109
>gi|18394898|ref|NP_564123.1| high mobility group B2 protein [Arabidopsis thaliana]
gi|75219648|sp|O49596.1|HMGB2_ARATH RecName: Full=High mobility group B protein 2; AltName: Full=High
mobility group protein B 1; Short=AtHMGbeta1; Short=HMG
beta 1; AltName: Full=Nucleosome/chromatin assembly
factor group D 02; Short=Nucleosome/chromatin assembly
factor group D 2
gi|13877971|gb|AAK44063.1|AF370248_1 unknown protein [Arabidopsis thaliana]
gi|2832359|emb|CAA74401.1| HMG protein [Arabidopsis thaliana]
gi|17104699|gb|AAL34238.1| unknown protein [Arabidopsis thaliana]
gi|21536964|gb|AAM61305.1| unknown [Arabidopsis thaliana]
gi|26452113|dbj|BAC43146.1| unknown protein [Arabidopsis thaliana]
gi|225897948|dbj|BAH30306.1| hypothetical protein [Arabidopsis thaliana]
gi|332191885|gb|AEE30006.1| high mobility group B2 protein [Arabidopsis thaliana]
Length = 144
Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/81 (66%), Positives = 70/81 (86%)
Query: 47 KSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPF 106
K+A KDPNKPKRP SAFFVF+E+FR+ +K+E+P K+V+ VGKA G+KWKSL+D+EKAP+
Sbjct: 29 KAAAKDPNKPKRPASAFFVFMEDFRETFKKENPKNKSVATVGKAAGDKWKSLSDSEKAPY 88
Query: 107 EAKAAKRKLDYEKLMTAYNKK 127
AKA KRK++YEK + AYNKK
Sbjct: 89 VAKAEKRKVEYEKNIKAYNKK 109
>gi|145323960|ref|NP_001077569.1| high mobility group B2 protein [Arabidopsis thaliana]
gi|332191887|gb|AEE30008.1| high mobility group B2 protein [Arabidopsis thaliana]
Length = 143
Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/81 (66%), Positives = 70/81 (86%)
Query: 47 KSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPF 106
K+A KDPNKPKRP SAFFVF+E+FR+ +K+E+P K+V+ VGKA G+KWKSL+D+EKAP+
Sbjct: 29 KAAAKDPNKPKRPASAFFVFMEDFRETFKKENPKNKSVATVGKAAGDKWKSLSDSEKAPY 88
Query: 107 EAKAAKRKLDYEKLMTAYNKK 127
AKA KRK++YEK + AYNKK
Sbjct: 89 VAKAEKRKVEYEKNIKAYNKK 109
>gi|371721822|gb|AEX55234.1| HMG transcription factor [Allium sativum]
Length = 115
Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 53/72 (73%), Positives = 64/72 (88%)
Query: 56 PKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKL 115
PKRPPSAFFVF+E+FRK++K+++P+ K VSAVGKA G+KWKSLT AEKAP+EAKAAKRK
Sbjct: 2 PKRPPSAFFVFMEDFRKIFKEKNPDNKQVSAVGKAAGDKWKSLTAAEKAPYEAKAAKRKA 61
Query: 116 DYEKLMTAYNKK 127
+Y K M AYNKK
Sbjct: 62 EYTKTMAAYNKK 73
>gi|302790391|ref|XP_002976963.1| hypothetical protein SELMODRAFT_175895 [Selaginella moellendorffii]
gi|300155441|gb|EFJ22073.1| hypothetical protein SELMODRAFT_175895 [Selaginella moellendorffii]
Length = 156
Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 50/77 (64%), Positives = 63/77 (81%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN+PKRP +AFFVFLEE+RK +K +HPN+K V+AVGKAGG+ WK LT+ EK P+ KAA
Sbjct: 51 DPNQPKRPATAFFVFLEEYRKTFKDKHPNIKGVAAVGKAGGDAWKRLTEEEKKPYHDKAA 110
Query: 112 KRKLDYEKLMTAYNKKQ 128
++K DYEK +T Y KKQ
Sbjct: 111 QKKADYEKTLTEYKKKQ 127
>gi|302797885|ref|XP_002980703.1| hypothetical protein SELMODRAFT_38818 [Selaginella moellendorffii]
gi|300151709|gb|EFJ18354.1| hypothetical protein SELMODRAFT_38818 [Selaginella moellendorffii]
Length = 83
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 50/77 (64%), Positives = 63/77 (81%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN+PKRP +AFFVFLEE+RK +K +HPN+K V+AVGKAGG+ WK LT+ EK P+ KAA
Sbjct: 7 DPNQPKRPATAFFVFLEEYRKTFKDKHPNIKGVAAVGKAGGDAWKRLTEEEKKPYHDKAA 66
Query: 112 KRKLDYEKLMTAYNKKQ 128
++K DYEK +T Y KKQ
Sbjct: 67 QKKADYEKTLTEYKKKQ 83
>gi|295913099|gb|ADG57812.1| transcription factor [Lycoris longituba]
Length = 120
Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/78 (69%), Positives = 66/78 (84%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEA 108
A KDPNKPKR PSAFFVF+E+FRK +K+++P K+V+AVGKAGGE+WKS++DAEKAPF
Sbjct: 3 AGKDPNKPKRAPSAFFVFMEDFRKEFKEKNPKNKSVAAVGKAGGERWKSMSDAEKAPFVK 62
Query: 109 KAAKRKLDYEKLMTAYNK 126
KA K K +YEK M AYNK
Sbjct: 63 KAEKLKAEYEKKMVAYNK 80
>gi|194466163|gb|ACF74312.1| high mobility group protein 1 [Arachis hypogaea]
Length = 139
Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/78 (70%), Positives = 70/78 (89%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPNKPKRPPSAFFVF+ EFR+ YK+EHPN K+V+ VGKAGG++WKS++DA+KAP++AKA
Sbjct: 31 KDPNKPKRPPSAFFVFMSEFREQYKKEHPNNKSVAVVGKAGGDRWKSMSDADKAPYQAKA 90
Query: 111 AKRKLDYEKLMTAYNKKQ 128
K+K +YE+ M AYNKKQ
Sbjct: 91 EKKKEEYERTMQAYNKKQ 108
>gi|217075707|gb|ACJ86213.1| unknown [Medicago truncatula]
gi|388513073|gb|AFK44598.1| unknown [Medicago truncatula]
Length = 142
Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 52/84 (61%), Positives = 67/84 (79%)
Query: 44 KNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEK 103
K K A KDPNKPKRPPSAFFVF+ +FR+ YK++HPN K+V+AVGKA GE WKS+++ +K
Sbjct: 25 KQTKKAAKDPNKPKRPPSAFFVFMSDFREQYKKDHPNNKSVAAVGKACGEAWKSMSEEDK 84
Query: 104 APFEAKAAKRKLDYEKLMTAYNKK 127
AP+ A+A K+K +YE AYNKK
Sbjct: 85 APYAARALKKKEEYEVATQAYNKK 108
>gi|357484151|ref|XP_003612362.1| HMG1/2-like protein [Medicago truncatula]
gi|355513697|gb|AES95320.1| HMG1/2-like protein [Medicago truncatula]
Length = 140
Score = 108 bits (271), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 55/83 (66%), Positives = 69/83 (83%), Gaps = 1/83 (1%)
Query: 43 TKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAE 102
TK K AK DPNKPKRPPSAFFVF+ EFR+ +K+E+P+ K+V+ VGKAGG++WK+L+DA+
Sbjct: 24 TKQSKKAK-DPNKPKRPPSAFFVFMSEFRERFKKENPSNKSVAVVGKAGGKEWKALSDAD 82
Query: 103 KAPFEAKAAKRKLDYEKLMTAYN 125
KAPF AKA K K +YEK M AYN
Sbjct: 83 KAPFIAKADKLKEEYEKTMRAYN 105
>gi|729737|sp|P40620.1|HMGL_VICFA RecName: Full=HMG1/2-like protein
Length = 149
Score = 108 bits (269), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 50/77 (64%), Positives = 65/77 (84%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPNKPKRPPSAFFVF+ +FR+ YK++HPN K+V+AVGKA GE+WKSL++ EKAP+ +A
Sbjct: 40 KDPNKPKRPPSAFFVFMADFREQYKKDHPNNKSVAAVGKACGEEWKSLSEEEKAPYVDRA 99
Query: 111 AKRKLDYEKLMTAYNKK 127
K+K +YE + AYNKK
Sbjct: 100 LKKKEEYEITLQAYNKK 116
>gi|295913196|gb|ADG57857.1| transcription factor [Lycoris longituba]
Length = 143
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/80 (63%), Positives = 66/80 (82%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEA 108
A KDPNKPKRPPSAFFVF+E FRK +K ++P K+++AVGKAGGE+WKS++D+EKAPF +
Sbjct: 26 AGKDPNKPKRPPSAFFVFMEGFRKEFKDKNPKNKSIAAVGKAGGERWKSMSDSEKAPFVS 85
Query: 109 KAAKRKLDYEKLMTAYNKKQ 128
KA K K +Y K M A+NK +
Sbjct: 86 KAEKLKAEYGKKMNAHNKGE 105
>gi|255566393|ref|XP_002524182.1| DNA-binding protein MNB1B, putative [Ricinus communis]
gi|223536551|gb|EEF38197.1| DNA-binding protein MNB1B, putative [Ricinus communis]
Length = 155
Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 51/92 (55%), Positives = 75/92 (81%), Gaps = 3/92 (3%)
Query: 38 SSNKRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKS 97
+S+++ KNV KD + PKRP SAFF+F++EFRK +K+++P+ KAVSAVGKAGGEKWKS
Sbjct: 33 ASSRKKKNVS---KDTDAPKRPASAFFIFMDEFRKYFKEKYPDNKAVSAVGKAGGEKWKS 89
Query: 98 LTDAEKAPFEAKAAKRKLDYEKLMTAYNKKQY 129
L++ +KAP+ KA KRK +YEK++ AY ++++
Sbjct: 90 LSETDKAPYLEKALKRKAEYEKVLEAYKQQKF 121
>gi|397396|emb|CAA46876.1| DNA-binding protein [Zea mays]
Length = 168
Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/129 (48%), Positives = 83/129 (64%), Gaps = 17/129 (13%)
Query: 1 MKVTRGKGAVKKDKNEVVKPVEDRAAGKRKAVLKASRSSNKRTKNVKS-AKKDPNKPKRP 59
MK + KGA K D VK S+ + K K K A KDPNKPKR
Sbjct: 12 MKGAKSKGAAKADAKLAVK----------------SKGAEKPAKGRKGKAGKDPNKPKRA 55
Query: 60 PSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKLDYEK 119
PSAFFVF+EEFRK +K+++P K+V+AVGKA G++WKSL++++KAP+ AKA K KL+Y K
Sbjct: 56 PSAFFVFMEEFRKEFKEKNPKNKSVAAVGKAAGDRWKSLSESDKAPYVAKANKLKLEYNK 115
Query: 120 LMTAYNKKQ 128
+ AYNK +
Sbjct: 116 AIAAYNKGE 124
>gi|293335943|ref|NP_001167650.1| high mobility group protein1 [Zea mays]
gi|123378|sp|P27347.1|MNB1B_MAIZE RecName: Full=DNA-binding protein MNB1B; AltName: Full=HMG1-like
protein
gi|22329|emb|CAA41220.1| high mobility group protein [Zea mays]
gi|5441502|emb|CAB46752.1| HMGa protein [Zea mays]
gi|22347617|gb|AAM95942.1| nucleosome/chromatin assembly factor group D protein [Zea mays]
gi|194701148|gb|ACF84658.1| unknown [Zea mays]
gi|194702316|gb|ACF85242.1| unknown [Zea mays]
gi|194703290|gb|ACF85729.1| unknown [Zea mays]
gi|195606194|gb|ACG24927.1| DNA-binding protein MNB1B [Zea mays]
gi|195612638|gb|ACG28149.1| DNA-binding protein MNB1B [Zea mays]
gi|195618138|gb|ACG30899.1| DNA-binding protein MNB1B [Zea mays]
gi|195618904|gb|ACG31282.1| DNA-binding protein MNB1B [Zea mays]
gi|195619012|gb|ACG31336.1| DNA-binding protein MNB1B [Zea mays]
gi|195619124|gb|ACG31392.1| DNA-binding protein MNB1B [Zea mays]
gi|195638824|gb|ACG38880.1| DNA-binding protein MNB1B [Zea mays]
gi|195642004|gb|ACG40470.1| DNA-binding protein MNB1B [Zea mays]
gi|223972731|gb|ACN30553.1| unknown [Zea mays]
gi|223972797|gb|ACN30586.1| unknown [Zea mays]
gi|223973279|gb|ACN30827.1| unknown [Zea mays]
gi|223974975|gb|ACN31675.1| unknown [Zea mays]
gi|413935043|gb|AFW69594.1| high mobility group protein1 [Zea mays]
Length = 157
Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/129 (48%), Positives = 83/129 (64%), Gaps = 17/129 (13%)
Query: 1 MKVTRGKGAVKKDKNEVVKPVEDRAAGKRKAVLKASRSSNKRTKNVKS-AKKDPNKPKRP 59
MK + KGA K D VK S+ + K K K A KDPNKPKR
Sbjct: 1 MKGAKSKGAAKADAKLAVK----------------SKGAEKPAKGRKGKAGKDPNKPKRA 44
Query: 60 PSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKLDYEK 119
PSAFFVF+EEFRK +K+++P K+V+AVGKA G++WKSL++++KAP+ AKA K KL+Y K
Sbjct: 45 PSAFFVFMEEFRKEFKEKNPKNKSVAAVGKAAGDRWKSLSESDKAPYVAKANKLKLEYNK 104
Query: 120 LMTAYNKKQ 128
+ AYNK +
Sbjct: 105 AIAAYNKGE 113
>gi|413935042|gb|AFW69593.1| high mobility group protein1 [Zea mays]
Length = 220
Score = 105 bits (262), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 63/129 (48%), Positives = 83/129 (64%), Gaps = 17/129 (13%)
Query: 1 MKVTRGKGAVKKDKNEVVKPVEDRAAGKRKAVLKASRSSNKRTKNVKS-AKKDPNKPKRP 59
MK + KGA K D VK S+ + K K K A KDPNKPKR
Sbjct: 1 MKGAKSKGAAKADAKLAVK----------------SKGAEKPAKGRKGKAGKDPNKPKRA 44
Query: 60 PSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKLDYEK 119
PSAFFVF+EEFRK +K+++P K+V+AVGKA G++WKSL++++KAP+ AKA K KL+Y K
Sbjct: 45 PSAFFVFMEEFRKEFKEKNPKNKSVAAVGKAAGDRWKSLSESDKAPYVAKANKLKLEYNK 104
Query: 120 LMTAYNKKQ 128
+ AYNK +
Sbjct: 105 AIAAYNKGE 113
>gi|115470082|ref|NP_001058640.1| Os06g0728000 [Oryza sativa Japonica Group]
gi|3885888|gb|AAC78104.1| high mobility group protein [Oryza sativa Japonica Group]
gi|23345287|gb|AAN28722.1| HMG1 protein [Oryza sativa Indica Group]
gi|30267833|gb|AAP21609.1| HMGB1 [Oryza sativa Indica Group]
gi|54291150|dbj|BAD61823.1| HMGB1 [Oryza sativa Japonica Group]
gi|113596680|dbj|BAF20554.1| Os06g0728000 [Oryza sativa Japonica Group]
gi|213959190|gb|ACJ54929.1| HMG protein [Oryza sativa Japonica Group]
gi|215692803|dbj|BAG88247.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222636260|gb|EEE66392.1| hypothetical protein OsJ_22728 [Oryza sativa Japonica Group]
Length = 157
Score = 105 bits (261), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 51/80 (63%), Positives = 66/80 (82%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEA 108
A KDPNKPKR PSAFFVF+EEFRK +K+++P K+V+AVGKA G++WKSLT+A+KAP+ A
Sbjct: 35 AGKDPNKPKRAPSAFFVFMEEFRKEFKEKNPKNKSVAAVGKAAGDRWKSLTEADKAPYVA 94
Query: 109 KAAKRKLDYEKLMTAYNKKQ 128
KA K K +Y K + AYNK +
Sbjct: 95 KANKLKAEYNKAIAAYNKGE 114
>gi|295913113|gb|ADG57819.1| transcription factor [Lycoris longituba]
Length = 108
Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/92 (59%), Positives = 69/92 (75%)
Query: 33 LKASRSSNKRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGG 92
L + + K+T+ A KDPNKPKR SAFFVF+E FRK +K+++P K+V+AVGKAGG
Sbjct: 17 LAVKKGAPKKTEKKVKAGKDPNKPKRAASAFFVFMEGFRKEFKEKNPKNKSVAAVGKAGG 76
Query: 93 EKWKSLTDAEKAPFEAKAAKRKLDYEKLMTAY 124
EKWKS++DAEKAPF KA K K +YEK M AY
Sbjct: 77 EKWKSMSDAEKAPFVKKAEKLKAEYEKKMVAY 108
>gi|449468356|ref|XP_004151887.1| PREDICTED: HMG1/2-like protein-like [Cucumis sativus]
gi|449517965|ref|XP_004166014.1| PREDICTED: HMG1/2-like protein-like [Cucumis sativus]
Length = 142
Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/81 (61%), Positives = 61/81 (75%)
Query: 44 KNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEK 103
K+ KS KKD N PKRP + FFVF+EEFRK YK++ P+ KA VGK GGEKWKS++DAEK
Sbjct: 27 KSTKSKKKDQNAPKRPATTFFVFMEEFRKTYKEQFPDAKAGPVVGKVGGEKWKSMSDAEK 86
Query: 104 APFEAKAAKRKLDYEKLMTAY 124
AP+ KA KRK +YE + AY
Sbjct: 87 APYAEKALKRKAEYEIALEAY 107
>gi|346467231|gb|AEO33460.1| hypothetical protein [Amblyomma maculatum]
Length = 115
Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/81 (60%), Positives = 64/81 (79%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEA 108
+KDPNKPKRPP+ FFVF+E FRK YK+ HP K+V+ VGKAGGEKWKSL+++EKA F +
Sbjct: 5 GEKDPNKPKRPPTGFFVFMEGFRKQYKEAHPKNKSVAVVGKAGGEKWKSLSESEKAVFLS 64
Query: 109 KAAKRKLDYEKLMTAYNKKQY 129
KA K + +Y+K + AY K Q+
Sbjct: 65 KAEKLRSEYQKKIDAYEKGQH 85
>gi|18419623|gb|AAL69379.1|AF462216_1 HMG-domain containing protein [Narcissus pseudonarcissus]
Length = 106
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/68 (72%), Positives = 60/68 (88%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEA 108
A+KDPNKPKRPPSAFFVF+EEFRK +K+++PN K VS VGKA G+KWKS++ EKAP+EA
Sbjct: 39 AEKDPNKPKRPPSAFFVFMEEFRKQFKEKNPNNKQVSVVGKAAGDKWKSMSATEKAPYEA 98
Query: 109 KAAKRKLD 116
KAAKRK +
Sbjct: 99 KAAKRKAE 106
>gi|357123079|ref|XP_003563240.1| PREDICTED: DNA-binding protein MNB1B-like [Brachypodium distachyon]
Length = 160
Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/130 (48%), Positives = 82/130 (63%), Gaps = 18/130 (13%)
Query: 1 MKVTRGKGAVKKDKNEVVKP--VEDRAAGKRKAVLKASRSSNKRTKNVKSAKKDPNKPKR 58
MK + KGAVK D VK E AA RK A KDPNKPKR
Sbjct: 1 MKGAKSKGAVKADTKLAVKSKGAEKPAAKGRKG----------------KAGKDPNKPKR 44
Query: 59 PPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKLDYE 118
PSAFFVF++EFRK +K+++P K+V+AVGKA GE+WK+L++++KAP+ AKA K K +Y
Sbjct: 45 APSAFFVFMDEFRKEFKEKNPKNKSVAAVGKAAGERWKTLSESDKAPYVAKANKLKAEYN 104
Query: 119 KLMTAYNKKQ 128
K + AYNK +
Sbjct: 105 KAIAAYNKGE 114
>gi|297836478|ref|XP_002886121.1| hypothetical protein ARALYDRAFT_480649 [Arabidopsis lyrata subsp.
lyrata]
gi|297331961|gb|EFH62380.1| hypothetical protein ARALYDRAFT_480649 [Arabidopsis lyrata subsp.
lyrata]
Length = 143
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 49/81 (60%), Positives = 61/81 (75%)
Query: 47 KSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPF 106
K KKDPN+PKRPPSAFFVFLE+FRK + +PN K+V+ VGKA G +WKS+T+ +KAP+
Sbjct: 26 KKTKKDPNQPKRPPSAFFVFLEDFRKEFNLANPNNKSVATVGKAAGARWKSMTEEDKAPY 85
Query: 107 EAKAAKRKLDYEKLMTAYNKK 127
AKA RK +Y K M YN K
Sbjct: 86 VAKAESRKTEYLKTMQQYNMK 106
>gi|302796105|ref|XP_002979815.1| hypothetical protein SELMODRAFT_18312 [Selaginella moellendorffii]
gi|302807533|ref|XP_002985461.1| hypothetical protein SELMODRAFT_18313 [Selaginella moellendorffii]
gi|300146924|gb|EFJ13591.1| hypothetical protein SELMODRAFT_18313 [Selaginella moellendorffii]
gi|300152575|gb|EFJ19217.1| hypothetical protein SELMODRAFT_18312 [Selaginella moellendorffii]
Length = 84
Score = 102 bits (253), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 48/81 (59%), Positives = 63/81 (77%)
Query: 47 KSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPF 106
K A KDPN PKRPP+AFFVFLE FR+ YK++HP+VK V+AVGKA G+KW ++++EKA +
Sbjct: 4 KKASKDPNLPKRPPTAFFVFLESFRQQYKEDHPDVKGVAAVGKAAGDKWSKMSESEKAVY 63
Query: 107 EAKAAKRKLDYEKLMTAYNKK 127
KAA+ + DY + M AY KK
Sbjct: 64 VNKAAQLRADYAESMAAYKKK 84
>gi|449464956|ref|XP_004150195.1| PREDICTED: high mobility group B protein 7-like [Cucumis sativus]
gi|449531370|ref|XP_004172659.1| PREDICTED: high mobility group B protein 7-like [Cucumis sativus]
Length = 207
Score = 102 bits (253), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 54/110 (49%), Positives = 74/110 (67%), Gaps = 5/110 (4%)
Query: 21 VEDRAAGKRKAVLKASRSSNKRTKNVKSAKK-----DPNKPKRPPSAFFVFLEEFRKVYK 75
VE + K+ A K S SS +TK ++ KK DPN PKRPP+AFF+F+++FRK YK
Sbjct: 71 VEKQTQSKKPAEKKRSASSEPKTKKSRTEKKGKKDKDPNAPKRPPTAFFIFMDDFRKSYK 130
Query: 76 QEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKLDYEKLMTAYN 125
+ +P+ K V V K GGEKWKS+TD EK P++ KAA+ K +YEK + + N
Sbjct: 131 EANPDSKGVKEVAKEGGEKWKSMTDEEKKPYQDKAAELKAEYEKALESRN 180
>gi|2832355|emb|CAA74403.1| HMG protein [Arabidopsis thaliana]
Length = 138
Score = 101 bits (252), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 49/81 (60%), Positives = 61/81 (75%)
Query: 47 KSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPF 106
K KKDPN+PKRPPSAFFVFLE+FRK + +PN K+V+ VGKA G +WKS+TD +KAP+
Sbjct: 26 KKTKKDPNQPKRPPSAFFVFLEDFRKEFNLANPNNKSVATVGKAAGARWKSMTDEDKAPY 85
Query: 107 EAKAAKRKLDYEKLMTAYNKK 127
AKA RK +Y K + YN K
Sbjct: 86 VAKAESRKTEYIKNVQQYNLK 106
>gi|4468042|emb|CAB37859.1| unnamed protein product [Vicia faba var. minor]
Length = 74
Score = 101 bits (252), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 47/74 (63%), Positives = 62/74 (83%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPNKPKRPPSAFFVF+ +FR+ YK++HPN K+V+AVGKA GE+WKSL++ EKAP+ +A
Sbjct: 1 KDPNKPKRPPSAFFVFMADFREQYKKDHPNNKSVAAVGKACGEEWKSLSEEEKAPYVDRA 60
Query: 111 AKRKLDYEKLMTAY 124
K+K +YE + AY
Sbjct: 61 LKKKEEYEITLQAY 74
>gi|21592453|gb|AAM64404.1| putative HMG protein [Arabidopsis thaliana]
Length = 138
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/78 (61%), Positives = 60/78 (76%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
KKDPN+PKRPPSAFFVFLE+FRK + +PN K+V+ VGKA G +WKS+TD +KAP+ AK
Sbjct: 29 KKDPNQPKRPPSAFFVFLEDFRKEFNLANPNNKSVATVGKAAGARWKSMTDEDKAPYVAK 88
Query: 110 AAKRKLDYEKLMTAYNKK 127
A RK +Y K + YN K
Sbjct: 89 AESRKTEYIKNVQQYNLK 106
>gi|950053|emb|CAA90679.1| HMG1/2-like protein [Hordeum vulgare subsp. vulgare]
Length = 160
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/77 (62%), Positives = 63/77 (81%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPNKPKR PSAFFVF+ EFR+ +KQ++P K+V+AVGKA GE+WKSL+++EKAPF AKA
Sbjct: 38 DPNKPKRAPSAFFVFMGEFREEFKQKNPKNKSVAAVGKAAGERWKSLSESEKAPFVAKAN 97
Query: 112 KRKLDYEKLMTAYNKKQ 128
K K +Y K + +YNK +
Sbjct: 98 KLKGEYNKAIASYNKGE 114
>gi|359484115|ref|XP_002267697.2| PREDICTED: high mobility group B protein 7-like [Vitis vinifera]
gi|147815109|emb|CAN61363.1| hypothetical protein VITISV_034306 [Vitis vinifera]
gi|297742725|emb|CBI35359.3| unnamed protein product [Vitis vinifera]
Length = 190
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/75 (60%), Positives = 58/75 (77%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPP+AFF+F+++FRK YK+ +P+ K VS V K GGEKWKS+TD EK P+ KA
Sbjct: 94 KDPNMPKRPPTAFFLFMDDFRKEYKESNPDSKNVSVVAKEGGEKWKSMTDEEKKPYVDKA 153
Query: 111 AKRKLDYEKLMTAYN 125
A+ K +Y+K M YN
Sbjct: 154 AELKAEYDKAMETYN 168
>gi|145328748|ref|NP_001077909.1| high mobility group B4 protein [Arabidopsis thaliana]
gi|222423535|dbj|BAH19737.1| AT2G17560 [Arabidopsis thaliana]
gi|330251559|gb|AEC06653.1| high mobility group B4 protein [Arabidopsis thaliana]
Length = 134
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/81 (59%), Positives = 61/81 (75%)
Query: 47 KSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPF 106
K KKDPN+PKRPPSAFFVFLE+FRK + +PN K+V+ VGKA G +WK++TD +KAP+
Sbjct: 26 KKTKKDPNQPKRPPSAFFVFLEDFRKEFNLANPNNKSVATVGKAAGARWKAMTDEDKAPY 85
Query: 107 EAKAAKRKLDYEKLMTAYNKK 127
AKA RK +Y K + YN K
Sbjct: 86 VAKAESRKTEYIKNVQQYNLK 106
>gi|125583208|gb|EAZ24139.1| hypothetical protein OsJ_07880 [Oryza sativa Japonica Group]
Length = 170
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/123 (43%), Positives = 79/123 (64%), Gaps = 10/123 (8%)
Query: 6 GKGAVKKDKNEVVKPVEDRAAGKRKAVLKASRSSNKRTKNVKSAKKDPNKPKRPPSAFFV 65
G GA+ + VV E + +++LKA+ + KR K S K PKRPPSAFFV
Sbjct: 18 GDGAIDHVRGSVVTGKE-----RTRSMLKAAGGAGKRKKAAASGK-----PKRPPSAFFV 67
Query: 66 FLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKLDYEKLMTAYN 125
F+ EFR+ Y+ HP+ K+V+AV KA GEKW+++++ EKAP+ KA ++K DYEK ++
Sbjct: 68 FMSEFRQEYQAAHPDNKSVAAVSKAAGEKWRAMSEQEKAPYVDKAGQKKQDYEKTKANFD 127
Query: 126 KKQ 128
KK+
Sbjct: 128 KKE 130
>gi|15227862|ref|NP_179347.1| high mobility group B4 protein [Arabidopsis thaliana]
gi|145323080|ref|NP_001031364.2| high mobility group B4 protein [Arabidopsis thaliana]
gi|310947092|sp|Q42344.1|HMGB4_ARATH RecName: Full=High mobility group B protein 4; AltName: Full=High
mobility group protein G; Short=AtHMGgamma; Short=HMG
gamma; AltName: Full=Nucleosome/chromatin assembly
factor group D 04; Short=Nucleosome/chromatin assembly
factor group D 4
gi|13926177|gb|AAK49570.1|AF370562_1 putative HMG protein [Arabidopsis thaliana]
gi|4914377|gb|AAD32913.1| putative HMG protein [Arabidopsis thaliana]
gi|23297615|gb|AAN12992.1| putative HMG protein [Arabidopsis thaliana]
gi|330251557|gb|AEC06651.1| high mobility group B4 protein [Arabidopsis thaliana]
gi|330251558|gb|AEC06652.1| high mobility group B4 protein [Arabidopsis thaliana]
Length = 138
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/81 (59%), Positives = 61/81 (75%)
Query: 47 KSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPF 106
K KKDPN+PKRPPSAFFVFLE+FRK + +PN K+V+ VGKA G +WK++TD +KAP+
Sbjct: 26 KKTKKDPNQPKRPPSAFFVFLEDFRKEFNLANPNNKSVATVGKAAGARWKAMTDEDKAPY 85
Query: 107 EAKAAKRKLDYEKLMTAYNKK 127
AKA RK +Y K + YN K
Sbjct: 86 VAKAESRKTEYIKNVQQYNLK 106
>gi|729738|sp|P40621.1|HMGL_WHEAT RecName: Full=HMG1/2-like protein
gi|21803|emb|CAA77641.1| high mobility group protein [Triticum aestivum]
gi|114145392|dbj|BAF30985.1| high mobility globular protein [Triticum aestivum]
Length = 161
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/77 (62%), Positives = 63/77 (81%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPNKPKR PSAFFVF+ EFR+ +KQ++P K+V+AVGKA GE+WKSL+++EKAP+ AKA
Sbjct: 38 DPNKPKRAPSAFFVFMGEFREEFKQKNPKNKSVAAVGKAAGERWKSLSESEKAPYVAKAN 97
Query: 112 KRKLDYEKLMTAYNKKQ 128
K K +Y K + AYNK +
Sbjct: 98 KLKGEYNKAIAAYNKGE 114
>gi|346467547|gb|AEO33618.1| hypothetical protein [Amblyomma maculatum]
Length = 146
Score = 99.0 bits (245), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 48/80 (60%), Positives = 65/80 (81%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEA 108
A KDPNKPKR PSAFFVFL+EFRK +K+++P K+V+AV KAGG +WKS++DA+K P+ +
Sbjct: 35 AAKDPNKPKRAPSAFFVFLDEFRKEFKEKNPENKSVAAVTKAGGARWKSMSDADKEPYVS 94
Query: 109 KAAKRKLDYEKLMTAYNKKQ 128
KA K K++Y+K + AY K Q
Sbjct: 95 KADKLKVEYQKKVKAYEKGQ 114
>gi|157382896|gb|ABV48883.1| high mobility group protein B1 [Physcomitrella patens]
Length = 215
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/76 (57%), Positives = 59/76 (77%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEA 108
A KD + PKRPPSA+F+F+E FRK +K +P+VK V+A KAGGEKW S+++ EKAP+ A
Sbjct: 130 AAKDSDMPKRPPSAYFIFMETFRKEFKAANPDVKGVTASAKAGGEKWLSMSEEEKAPYVA 189
Query: 109 KAAKRKLDYEKLMTAY 124
+A+ RK YE+ MTAY
Sbjct: 190 EASVRKGQYEQAMTAY 205
>gi|168050181|ref|XP_001777538.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671023|gb|EDQ57581.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 314
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 61/81 (75%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEA 108
A KD + PKRPPSA+F+F+E FRK +K +P+VK V+A KAGGEKW S+++ EKAP+ A
Sbjct: 186 AAKDSDMPKRPPSAYFIFMETFRKEFKAANPDVKGVTASAKAGGEKWLSMSEEEKAPYVA 245
Query: 109 KAAKRKLDYEKLMTAYNKKQY 129
+A+ RK YE+ MTAY ++
Sbjct: 246 EASVRKGQYEQAMTAYKVHRF 266
>gi|13877775|gb|AAK43965.1|AF370150_1 putative HMG protein [Arabidopsis thaliana]
Length = 138
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/81 (58%), Positives = 60/81 (74%)
Query: 47 KSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPF 106
K KKDPN+PKRPPSAFFVFLE+FRK + +PN K+V+ VGKA G +WK++TD +KAP+
Sbjct: 26 KKTKKDPNQPKRPPSAFFVFLEDFRKEFNLANPNNKSVATVGKAAGARWKAMTDEDKAPY 85
Query: 107 EAKAAKRKLDYEKLMTAYNKK 127
AKA K +Y K + YN K
Sbjct: 86 VAKAESIKTEYIKNVQQYNLK 106
>gi|218198917|gb|EEC81344.1| hypothetical protein OsI_24530 [Oryza sativa Indica Group]
Length = 163
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/131 (46%), Positives = 79/131 (60%), Gaps = 18/131 (13%)
Query: 1 MKVTRGKGAVKKDKNEVVKP--VEDRAAGKRKAVLKASRSSNKRTKNVKSAKKDPNKPKR 58
MK + KGA K D VK E AA RK A KDPNKPKR
Sbjct: 1 MKGAKSKGAAKPDAKLAVKSKGAEKPAAKGRKG----------------KAGKDPNKPKR 44
Query: 59 PPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKLDYE 118
PSAFFVF+EEFRK +K+++P K+V+AVGKA G++WKSLT+A+KAP+ AKA K K +Y
Sbjct: 45 APSAFFVFMEEFRKEFKEKNPKNKSVAAVGKAAGDRWKSLTEADKAPYVAKANKLKAEYN 104
Query: 119 KLMTAYNKKQY 129
+ + + +Y
Sbjct: 105 RPLLPTTRARY 115
>gi|388499756|gb|AFK37944.1| unknown [Lotus japonicus]
Length = 197
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 65/92 (70%), Gaps = 4/92 (4%)
Query: 34 KASRSSNKRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGE 93
KA R+ ++ K V+ DPN+PKRPP+AFFVFL++FRK +K+ +P K V VGK GGE
Sbjct: 84 KAKRAKTEKAKKVE----DPNQPKRPPTAFFVFLDDFRKEFKEANPGSKDVKRVGKEGGE 139
Query: 94 KWKSLTDAEKAPFEAKAAKRKLDYEKLMTAYN 125
KW+++TD EK P+ K A+ K +YEK M YN
Sbjct: 140 KWRAMTDEEKKPYLEKVAELKEEYEKAMANYN 171
>gi|115447831|ref|NP_001047695.1| Os02g0670400 [Oryza sativa Japonica Group]
gi|50251344|dbj|BAD28320.1| putative high mobility group protein [Oryza sativa Japonica Group]
gi|50252158|dbj|BAD28154.1| putative high mobility group protein [Oryza sativa Japonica Group]
gi|113537226|dbj|BAF09609.1| Os02g0670400 [Oryza sativa Japonica Group]
Length = 145
Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/96 (50%), Positives = 67/96 (69%), Gaps = 5/96 (5%)
Query: 33 LKASRSSNKRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGG 92
LKA+ + KR K S KPKRPPSAFFVF+ EFR+ Y+ HP+ K+V+AV KA G
Sbjct: 15 LKAAGGAGKRKKAAAS-----GKPKRPPSAFFVFMSEFRQEYQAAHPDNKSVAAVSKAAG 69
Query: 93 EKWKSLTDAEKAPFEAKAAKRKLDYEKLMTAYNKKQ 128
EKW+++++ EKAP+ KA ++K DYEK ++KK+
Sbjct: 70 EKWRAMSEQEKAPYVDKAGQKKQDYEKTKANFDKKE 105
>gi|18700443|dbj|BAB85204.1| high mobility group box protein 2 [Oryza sativa Japonica Group]
gi|125540625|gb|EAY87020.1| hypothetical protein OsI_08417 [Oryza sativa Indica Group]
Length = 145
Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 48/96 (50%), Positives = 66/96 (68%), Gaps = 5/96 (5%)
Query: 33 LKASRSSNKRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGG 92
LKA+ + KR K S KPKRPPSAFFVF+ EFR+ Y+ HP K+V+AV KA G
Sbjct: 15 LKAAGGAGKRKKAAAS-----GKPKRPPSAFFVFMSEFRQEYQAAHPGNKSVAAVSKAAG 69
Query: 93 EKWKSLTDAEKAPFEAKAAKRKLDYEKLMTAYNKKQ 128
EKW+++++ EKAP+ KA ++K DYEK ++KK+
Sbjct: 70 EKWRAMSEQEKAPYVDKAGQKKQDYEKTKANFDKKE 105
>gi|357136925|ref|XP_003570053.1| PREDICTED: HMG1/2-like protein-like [Brachypodium distachyon]
Length = 144
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 56/71 (78%)
Query: 58 RPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKLDY 117
RPPSAFFVF+ EFR+ Y+ EHPN K+V+ V KA GEKW+S++DA+KAP+ KA ++K DY
Sbjct: 36 RPPSAFFVFMSEFRQEYQAEHPNNKSVANVSKAAGEKWRSMSDADKAPYVEKAGQKKQDY 95
Query: 118 EKLMTAYNKKQ 128
EK ++KK+
Sbjct: 96 EKTKATFDKKE 106
>gi|351722065|ref|NP_001236719.1| uncharacterized protein LOC100306558 [Glycine max]
gi|255628875|gb|ACU14782.1| unknown [Glycine max]
Length = 209
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/77 (55%), Positives = 56/77 (72%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKRPP+AFFVFL++FRK +K+ +P+ K V VGK GEKW+S+TD EK P+ K A
Sbjct: 99 DPNMPKRPPTAFFVFLDDFRKSFKEANPDSKDVKRVGKEAGEKWRSMTDEEKKPYLDKVA 158
Query: 112 KRKLDYEKLMTAYNKKQ 128
+ K +YEK M +Y Q
Sbjct: 159 ELKEEYEKAMESYEAGQ 175
>gi|116785888|gb|ABK23898.1| unknown [Picea sitchensis]
Length = 220
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/86 (50%), Positives = 65/86 (75%), Gaps = 2/86 (2%)
Query: 41 KRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTD 100
KRT+ K+ +DPN+PK+P +AFFVF+++FRK YK+ +P+VK + VGK GG KWK+++D
Sbjct: 95 KRTREKKA--RDPNQPKKPATAFFVFMDDFRKTYKETNPDVKGAAQVGKEGGLKWKAMSD 152
Query: 101 AEKAPFEAKAAKRKLDYEKLMTAYNK 126
+K P+ KAA+ K +YEK M+ Y +
Sbjct: 153 EDKKPYLEKAAELKAEYEKAMSKYQQ 178
>gi|356536465|ref|XP_003536758.1| PREDICTED: high mobility group B protein 7-like [Glycine max]
Length = 200
Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 55/77 (71%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKRPP+AFF FL++FRK +K+ +P+ K V VGK GEKW+S+TD EK P+ K A
Sbjct: 99 DPNMPKRPPTAFFAFLDDFRKSFKEANPDSKDVKRVGKEAGEKWRSMTDEEKKPYLDKVA 158
Query: 112 KRKLDYEKLMTAYNKKQ 128
+ K +YEK M +Y Q
Sbjct: 159 ELKAEYEKAMESYEAGQ 175
>gi|226503761|ref|NP_001151622.1| HMG1/2-like protein [Zea mays]
gi|195648164|gb|ACG43550.1| HMG1/2-like protein [Zea mays]
gi|414881086|tpg|DAA58217.1| TPA: HMG1/2-like protein [Zea mays]
Length = 115
Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 50/101 (49%), Positives = 68/101 (67%), Gaps = 2/101 (1%)
Query: 30 KAVLKASR-SSNKRTKNVKSAKK-DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAV 87
K V A R SS KR K A K DP PK+PP+AFF F+E+FRK+YKQE P+VK++ +
Sbjct: 13 KTVAMAPRPSSTKRKPRPKPAGKGDPRAPKKPPTAFFYFMEDFRKIYKQEKPSVKSMQEI 72
Query: 88 GKAGGEKWKSLTDAEKAPFEAKAAKRKLDYEKLMTAYNKKQ 128
GKA GEKW ++T EK + A +++ ++EK M YNKK+
Sbjct: 73 GKACGEKWNTMTFEEKVKYYDIATEKRAEFEKAMIEYNKKK 113
>gi|357508231|ref|XP_003624404.1| High mobility group protein [Medicago truncatula]
gi|355499419|gb|AES80622.1| High mobility group protein [Medicago truncatula]
Length = 144
Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 45/81 (55%), Positives = 63/81 (77%), Gaps = 1/81 (1%)
Query: 47 KSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPF 106
K AK DP+KPKRP S FF+F+ +FR +++E+P+ K VS VGKA GEKW+S++D +KAP+
Sbjct: 4 KKAKSDPSKPKRPQSPFFLFMSDFRVRFRKENPDNKYVSVVGKAAGEKWRSMSD-DKAPY 62
Query: 107 EAKAAKRKLDYEKLMTAYNKK 127
A A K+K++Y K + AYNKK
Sbjct: 63 VADAEKKKMEYVKAIHAYNKK 83
>gi|15237040|ref|NP_195282.1| high mobility group B5 protein [Arabidopsis thaliana]
gi|75219649|sp|O49597.1|HMGB5_ARATH RecName: Full=High mobility group B protein 5; AltName: Full=High
mobility group protein D; Short=AtHMGdelta; Short=HMG
delta; AltName: Full=Nucleosome/chromatin assembly
factor group D 05; Short=Nucleosome/chromatin assembly
factor group D 5
gi|2832363|emb|CAA74404.1| HMG protein [Arabidopsis thaliana]
gi|3367575|emb|CAA20027.1| HMG delta protein [Arabidopsis thaliana]
gi|7270508|emb|CAB80273.1| HMG delta protein [Arabidopsis thaliana]
gi|21553743|gb|AAM62836.1| HMG delta protein [Arabidopsis thaliana]
gi|98961063|gb|ABF59015.1| At4g35570 [Arabidopsis thaliana]
gi|222423786|dbj|BAH19859.1| AT4G35570 [Arabidopsis thaliana]
gi|332661132|gb|AEE86532.1| high mobility group B5 protein [Arabidopsis thaliana]
Length = 125
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/94 (47%), Positives = 64/94 (68%), Gaps = 4/94 (4%)
Query: 36 SRSSNKRTK----NVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAG 91
SRS++ R K V KDPN+PK+PPS FFVFL++FRK + +P+ K+V VG+A
Sbjct: 10 SRSTDDRLKVRGNKVGKKTKDPNRPKKPPSPFFVFLDDFRKEFNLANPDNKSVGNVGRAA 69
Query: 92 GEKWKSLTDAEKAPFEAKAAKRKLDYEKLMTAYN 125
G+KWK++T+ E+APF AK+ +K +Y M YN
Sbjct: 70 GKKWKTMTEEERAPFVAKSQSKKTEYAVTMQQYN 103
>gi|195619220|gb|ACG31440.1| HMG1/2-like protein [Zea mays]
Length = 139
Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 39/74 (52%), Positives = 55/74 (74%)
Query: 55 KPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRK 114
KPKRPPSAFFVF+ EFR+ Y+ HP K+V+ V KA GEKW++++D EK P+ +A ++K
Sbjct: 32 KPKRPPSAFFVFMSEFRQQYQALHPGNKSVATVSKAAGEKWRAMSDQEKQPYVDQAGQKK 91
Query: 115 LDYEKLMTAYNKKQ 128
DYEK ++KK+
Sbjct: 92 QDYEKTKANFDKKE 105
>gi|1845195|emb|CAA69605.1| HMGc1 [Zea mays]
gi|5441504|emb|CAB46753.1| HMGc1 protein [Zea mays]
gi|194690322|gb|ACF79245.1| unknown [Zea mays]
gi|194704052|gb|ACF86110.1| unknown [Zea mays]
gi|219885481|gb|ACL53115.1| unknown [Zea mays]
gi|413938184|gb|AFW72735.1| HMG-like nucleosome/chromatin assembly factor D isoform 1 [Zea
mays]
gi|413938185|gb|AFW72736.1| HMG-like nucleosome/chromatin assembly factor D isoform 2 [Zea
mays]
Length = 139
Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 39/74 (52%), Positives = 55/74 (74%)
Query: 55 KPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRK 114
KPKRPPSAFFVF+ EFR+ Y+ HP K+V+ V KA GEKW++++D EK P+ +A ++K
Sbjct: 32 KPKRPPSAFFVFMSEFRQEYQALHPGNKSVATVSKAAGEKWRAMSDQEKQPYVDQAGQKK 91
Query: 115 LDYEKLMTAYNKKQ 128
DYEK ++KK+
Sbjct: 92 QDYEKTKANFDKKE 105
>gi|162460809|ref|NP_001105483.1| high mobility group protein3 [Zea mays]
gi|1845197|emb|CAA69606.1| HMGc2 [Zea mays]
gi|223947405|gb|ACN27786.1| unknown [Zea mays]
gi|413923414|gb|AFW63346.1| HMGc2 protein [Zea mays]
Length = 138
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 52/66 (78%)
Query: 55 KPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRK 114
KPKRPPSAFFVF+ EFR+ Y+ +HP K+V+AV KA GEKW+S+++ EK P+ +A ++K
Sbjct: 33 KPKRPPSAFFVFMSEFRQEYQAQHPGNKSVAAVSKAAGEKWRSMSEQEKQPYVDQAGQKK 92
Query: 115 LDYEKL 120
DYEK
Sbjct: 93 QDYEKT 98
>gi|194700664|gb|ACF84416.1| unknown [Zea mays]
gi|194701704|gb|ACF84936.1| unknown [Zea mays]
gi|413923412|gb|AFW63344.1| hypothetical protein ZEAMMB73_127996 [Zea mays]
gi|413923413|gb|AFW63345.1| hypothetical protein ZEAMMB73_127996 [Zea mays]
Length = 139
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 52/66 (78%)
Query: 55 KPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRK 114
KPKRPPSAFFVF+ EFR+ Y+ +HP K+V+AV KA GEKW+S+++ EK P+ +A ++K
Sbjct: 33 KPKRPPSAFFVFMSEFRQEYQAQHPGNKSVAAVSKAAGEKWRSMSEQEKQPYVDQAGQKK 92
Query: 115 LDYEKL 120
DYEK
Sbjct: 93 QDYEKT 98
>gi|388495062|gb|AFK35597.1| unknown [Lotus japonicus]
Length = 162
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/117 (40%), Positives = 72/117 (61%), Gaps = 14/117 (11%)
Query: 25 AAGKRKAVL--KASRSSNKRTKNVKSAKK------------DPNKPKRPPSAFFVFLEEF 70
+A RK VL K+S + + KS KK D NKPK+PP+AFF FLE+F
Sbjct: 25 SASSRKLVLRVKSSEQMKRSAQQTKSTKKPKAKQKTSKQRIDANKPKKPPTAFFYFLEDF 84
Query: 71 RKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKLDYEKLMTAYNKK 127
RK ++ ++P+VK + +GK+ GEKWK++T EK + A +++ ++++ MT YNKK
Sbjct: 85 RKEFQVQNPDVKTMRDIGKSCGEKWKTMTYEEKVQYYDIATEKRAEFDRAMTEYNKK 141
>gi|162461550|ref|NP_001105075.1| high mobility group box protein2 [Zea mays]
gi|17017394|gb|AAL33651.1|AF440222_1 HMG-like nucleosome/chromatin assembly factor D [Zea mays]
Length = 139
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 54/74 (72%)
Query: 55 KPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRK 114
KPKRPPSAFF F+ EFR+ Y+ HP K+V+ V KA GEKW++++D EK P+ +A ++K
Sbjct: 32 KPKRPPSAFFAFMSEFRQEYQALHPGNKSVATVSKAAGEKWRAMSDQEKQPYVDQAGQKK 91
Query: 115 LDYEKLMTAYNKKQ 128
DYEK ++KK+
Sbjct: 92 QDYEKTKANFDKKE 105
>gi|449433698|ref|XP_004134634.1| PREDICTED: high mobility group B protein 14-like [Cucumis sativus]
gi|449505924|ref|XP_004162605.1| PREDICTED: high mobility group B protein 14-like [Cucumis sativus]
Length = 161
Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 73/108 (67%), Gaps = 10/108 (9%)
Query: 30 KAVLKASR-SSNKRTKNVK---------SAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHP 79
K+ KASR +++KR K +K + K D NKPK+PP+AFF FL++FRK +++++P
Sbjct: 37 KSAAKASRFNTDKRAKTIKKPNSKQKKKNDKFDVNKPKKPPTAFFYFLDDFRKEFQEQNP 96
Query: 80 NVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKLDYEKLMTAYNKK 127
+VK + VGKA GEKWK++T EK + A +++ +++K MT Y K+
Sbjct: 97 DVKTMRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFDKAMTEYKKR 144
>gi|242053921|ref|XP_002456106.1| hypothetical protein SORBIDRAFT_03g030540 [Sorghum bicolor]
gi|241928081|gb|EES01226.1| hypothetical protein SORBIDRAFT_03g030540 [Sorghum bicolor]
Length = 109
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/92 (48%), Positives = 62/92 (67%), Gaps = 1/92 (1%)
Query: 38 SSNKRTKNVKSAKK-DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWK 96
SS KR K A K D PK+PP+AFF F+E+FRKVYKQE P+VK++ +GKA GEKW
Sbjct: 6 SSPKRKSRPKPAGKGDRRAPKKPPTAFFYFMEDFRKVYKQEKPSVKSMQEIGKACGEKWN 65
Query: 97 SLTDAEKAPFEAKAAKRKLDYEKLMTAYNKKQ 128
++ EK + A +++ ++EK M YNKK+
Sbjct: 66 TMAFEEKVKYYDIATEKRAEFEKAMIEYNKKK 97
>gi|125559825|gb|EAZ05273.1| hypothetical protein OsI_27476 [Oryza sativa Indica Group]
gi|125559834|gb|EAZ05282.1| hypothetical protein OsI_27485 [Oryza sativa Indica Group]
Length = 204
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/63 (58%), Positives = 50/63 (79%)
Query: 55 KPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRK 114
K KRPP+AFF+F+ +FRK YK EHP+ K+VSAV K GGE+WKS++D +K P+ KAA+ K
Sbjct: 91 KGKRPPTAFFLFMSDFRKEYKAEHPDNKSVSAVAKEGGERWKSMSDEDKKPYLDKAAELK 150
Query: 115 LDY 117
+Y
Sbjct: 151 AEY 153
>gi|115474323|ref|NP_001060758.1| Os08g0101100 [Oryza sativa Japonica Group]
gi|38637289|dbj|BAD03552.1| putative HMG type nucleosome/chromatin assembly factor D [Oryza
sativa Japonica Group]
gi|113622727|dbj|BAF22672.1| Os08g0101100 [Oryza sativa Japonica Group]
gi|125601889|gb|EAZ41214.1| hypothetical protein OsJ_25719 [Oryza sativa Japonica Group]
gi|213959174|gb|ACJ54921.1| HMG type nucleosome/chromatin assembly factor [Oryza sativa
Japonica Group]
gi|215697671|dbj|BAG91665.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 203
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/63 (58%), Positives = 50/63 (79%)
Query: 55 KPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRK 114
K KRPP+AFF+F+ +FRK YK EHP+ K+VSAV K GGE+WKS++D +K P+ KAA+ K
Sbjct: 91 KGKRPPTAFFLFMSDFRKEYKAEHPDNKSVSAVAKEGGERWKSMSDEDKKPYLDKAAELK 150
Query: 115 LDY 117
+Y
Sbjct: 151 AEY 153
>gi|388501678|gb|AFK38905.1| unknown [Medicago truncatula]
Length = 152
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 67/111 (60%)
Query: 17 VVKPVEDRAAGKRKAVLKASRSSNKRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQ 76
+V ++ KR SR K + K D KPK+PP+AFF FLE+FRK +K
Sbjct: 25 LVLAIKSNEGMKRSLRQTKSRDITKAVQKKNKQKIDAKKPKKPPTAFFYFLEDFRKEFKD 84
Query: 77 EHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKLDYEKLMTAYNKK 127
++P+VK++ +GKA GEKWK++T EK + A +++ ++++ T YNKK
Sbjct: 85 QNPDVKSMRDIGKACGEKWKTMTFEEKVQYYDIATEKRAEFDRATTEYNKK 135
>gi|225463454|ref|XP_002275908.1| PREDICTED: high mobility group B protein 14 [Vitis vinifera]
gi|297740668|emb|CBI30850.3| unnamed protein product [Vitis vinifera]
Length = 175
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 60/82 (73%)
Query: 47 KSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPF 106
+S + D KPK+PP+AFF FLE+FRK +++++P+VK++ +GKA GEKWK++T EK +
Sbjct: 79 RSQRVDSKKPKKPPTAFFYFLEDFRKEFQEQNPDVKSMRDIGKACGEKWKTMTYEEKVQY 138
Query: 107 EAKAAKRKLDYEKLMTAYNKKQ 128
A +++ ++++ M Y K+Q
Sbjct: 139 YDIATEKRAEFDRAMADYIKRQ 160
>gi|255557355|ref|XP_002519708.1| DNA-binding protein MNB1B, putative [Ricinus communis]
gi|223541125|gb|EEF42681.1| DNA-binding protein MNB1B, putative [Ricinus communis]
Length = 198
Score = 81.6 bits (200), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 64/95 (67%)
Query: 33 LKASRSSNKRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGG 92
+K R+ KR + AK D KPK+PP+AFF FLE+FRK +++++P+VK++ +GKA G
Sbjct: 87 VKDKRAKPKRISKRQIAKLDSKKPKKPPTAFFYFLEDFRKDFQKQNPDVKSMREIGKACG 146
Query: 93 EKWKSLTDAEKAPFEAKAAKRKLDYEKLMTAYNKK 127
EKWK +T EK + A +++ +++K M Y KK
Sbjct: 147 EKWKMMTYEEKVKYYDIATEKRAEFDKAMAEYIKK 181
>gi|339716048|gb|AEJ88271.1| putative HMG DNA-binding protein [Wolffia arrhiza]
Length = 148
Score = 81.6 bits (200), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 47/77 (61%), Positives = 61/77 (79%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPNKPKR PSAFFVFLEEFRK YK++HP+ K+V+AVGKA G KW+S++D++KAP+ K+
Sbjct: 37 DPNKPKRAPSAFFVFLEEFRKEYKEKHPDNKSVAAVGKAAGAKWRSMSDSDKAPYVNKSN 96
Query: 112 KRKLDYEKLMTAYNKKQ 128
KRK + +K KKQ
Sbjct: 97 KRKAEVQKTAAVNAKKQ 113
>gi|357484153|ref|XP_003612363.1| HMG1/2-like protein [Medicago truncatula]
gi|355513698|gb|AES95321.1| HMG1/2-like protein [Medicago truncatula]
Length = 94
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/59 (66%), Positives = 51/59 (86%), Gaps = 1/59 (1%)
Query: 43 TKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDA 101
TK K AK DPNKPKRPPSAFFVF+ EFR+ +K+E+P+ K+V+ VGKAGG++WK+L+DA
Sbjct: 24 TKQSKKAK-DPNKPKRPPSAFFVFMSEFRERFKKENPSNKSVAVVGKAGGKEWKALSDA 81
>gi|224097317|ref|XP_002310906.1| high mobility group family [Populus trichocarpa]
gi|118483462|gb|ABK93630.1| unknown [Populus trichocarpa]
gi|222853809|gb|EEE91356.1| high mobility group family [Populus trichocarpa]
Length = 201
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 54/75 (72%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
+DPN PKRPP+AFF+F+++FRK YK+ +P+ K V V K GG +WKS+TD EK + KA
Sbjct: 100 RDPNAPKRPPTAFFLFMDDFRKEYKEANPDSKDVKKVAKEGGVRWKSMTDEEKKQYVDKA 159
Query: 111 AKRKLDYEKLMTAYN 125
A+ K + +K + + N
Sbjct: 160 AELKAENDKALESDN 174
>gi|356524949|ref|XP_003531090.1| PREDICTED: high mobility group B protein 14-like [Glycine max]
Length = 148
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 56/76 (73%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
D KPK+PP+AFF FLE+FRK +++++P+VK++ +GKA GEKWK++T EK + A
Sbjct: 56 DAMKPKKPPTAFFYFLEDFRKEFQEQNPDVKSMRDIGKACGEKWKTMTYEEKVQYYDIAT 115
Query: 112 KRKLDYEKLMTAYNKK 127
K++ +++ M +NKK
Sbjct: 116 KKREEFDNAMAEFNKK 131
>gi|297597325|ref|NP_001043799.2| Os01g0666200 [Oryza sativa Japonica Group]
gi|56202161|dbj|BAD73639.1| HMG protein-like [Oryza sativa Japonica Group]
gi|125527174|gb|EAY75288.1| hypothetical protein OsI_03176 [Oryza sativa Indica Group]
gi|215693961|dbj|BAG89148.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255673529|dbj|BAF05713.2| Os01g0666200 [Oryza sativa Japonica Group]
Length = 133
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 56/76 (73%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
D +PK+PP+AFF F+E+FRK YK+E+P+VK++ VGKA GEKW ++T E+ + A
Sbjct: 45 DRRRPKKPPTAFFYFMEDFRKTYKEENPSVKSMQEVGKACGEKWNTMTFEERVKYYDIAT 104
Query: 112 KRKLDYEKLMTAYNKK 127
+++ +YEK + ++KK
Sbjct: 105 EKRAEYEKAVAEFDKK 120
>gi|346472777|gb|AEO36233.1| hypothetical protein [Amblyomma maculatum]
Length = 208
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 52/66 (78%)
Query: 54 NKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKR 113
NKPKR P+AFF+F+++FRK YK+ HP+ K+V++V K GGE+W+S+T EK P+ +AA+
Sbjct: 102 NKPKRAPTAFFLFMDDFRKEYKELHPDNKSVASVAKEGGERWRSMTIEEKKPYTDRAAEL 161
Query: 114 KLDYEK 119
K +Y K
Sbjct: 162 KAEYVK 167
>gi|413935044|gb|AFW69595.1| high mobility group protein1 [Zea mays]
Length = 97
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 63/102 (61%), Gaps = 17/102 (16%)
Query: 1 MKVTRGKGAVKKDKNEVVKPVEDRAAGKRKAVLKASRSSNKRTKNVKS-AKKDPNKPKRP 59
MK + KGA K D VK S+ + K K K A KDPNKPKR
Sbjct: 1 MKGAKSKGAAKADAKLAVK----------------SKGAEKPAKGRKGKAGKDPNKPKRA 44
Query: 60 PSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDA 101
PSAFFVF+EEFRK +K+++P K+V+AVGKA G++WKSL+++
Sbjct: 45 PSAFFVFMEEFRKEFKEKNPKNKSVAAVGKAAGDRWKSLSES 86
>gi|52219178|ref|NP_001004674.1| high-mobility group box 2b [Danio rerio]
gi|51858850|gb|AAH81415.1| High-mobility group box 2 [Danio rerio]
gi|182889482|gb|AAI65150.1| Hmgb2 protein [Danio rerio]
Length = 214
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
KKDPN PKRPPSAFFVF E+R K EHPN+ + + K GE W + ++APFE K
Sbjct: 91 KKDPNAPKRPPSAFFVFCSEYRPTVKSEHPNL-TIGEIAKKLGELWSKQSSKDRAPFEQK 149
Query: 110 AAKRKLDYEKLMTAY 124
A K + YEK + AY
Sbjct: 150 AGKLREKYEKEVAAY 164
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFEA 108
K D NKPK SA+ F++ R +K++ P+V S K E+WKSL ++K FE
Sbjct: 3 KGDVNKPKGKTSAYAFFVQTCRDEHKRKSPDVPVNFSEFSKKCSERWKSLNASDKVKFED 62
Query: 109 KAAKRKLDYEKLMTAY 124
A K+ Y++ M Y
Sbjct: 63 MAKADKVRYDREMKTY 78
>gi|213982973|ref|NP_001135648.1| uncharacterized protein LOC100216207 [Xenopus (Silurana)
tropicalis]
gi|156914901|gb|AAI52619.1| Hmgb2 protein [Danio rerio]
gi|197245630|gb|AAI68534.1| Unknown (protein for MGC:181066) [Xenopus (Silurana) tropicalis]
Length = 214
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
KKDPN PKRPPSAFFVF E+R K EHPN+ + + K GE W + ++APFE K
Sbjct: 91 KKDPNAPKRPPSAFFVFCSEYRPTVKSEHPNL-TIGEIAKKLGELWSKQSSKDRAPFEQK 149
Query: 110 AAKRKLDYEKLMTAY 124
A K + YEK + AY
Sbjct: 150 AGKLREKYEKEVAAY 164
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFEA 108
K D NKPK SA+ F++ R +K++ P+V S K E+WKSL ++K FE
Sbjct: 3 KGDVNKPKGKTSAYAFFVQTCRDEHKRKGPDVPVNFSEFSKKCSERWKSLNASDKVKFED 62
Query: 109 KAAKRKLDYEKLMTAY 124
A K+ Y++ M Y
Sbjct: 63 MAKADKVRYDREMKTY 78
>gi|125527178|gb|EAY75292.1| hypothetical protein OsI_03182 [Oryza sativa Indica Group]
Length = 133
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 56/76 (73%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
D +PK+PP+AFF F+E+FRK YK+E+P+VK++ VGKA GEKW ++T E+ + A
Sbjct: 45 DRRRPKKPPTAFFYFMEDFRKTYKEENPSVKSMQEVGKACGEKWNTMTFEERVKYYDIAT 104
Query: 112 KRKLDYEKLMTAYNKK 127
+++ +YEK + ++KK
Sbjct: 105 EKRAEYEKPVAEFDKK 120
>gi|293333310|ref|NP_001168929.1| uncharacterized protein LOC100382741 [Zea mays]
gi|223973791|gb|ACN31083.1| unknown [Zea mays]
Length = 204
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 47/62 (75%)
Query: 54 NKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKR 113
KPKRPPSAFFVF+ EFR+ Y+ HP K+V+ V KA GEKW++++D EK P+ +A ++
Sbjct: 31 GKPKRPPSAFFVFMSEFRQEYQALHPGNKSVATVSKAAGEKWRAMSDQEKQPYVDQAGQK 90
Query: 114 KL 115
KL
Sbjct: 91 KL 92
>gi|351724833|ref|NP_001237839.1| uncharacterized protein LOC100305607 [Glycine max]
gi|255626057|gb|ACU13373.1| unknown [Glycine max]
Length = 150
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 56/76 (73%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
D KP++PP+AFF FLE+FRK +++++P+V+++ +GKA GEKWK++T EK + A
Sbjct: 58 DAMKPRKPPTAFFYFLEDFRKEFQEQNPDVRSMRDIGKACGEKWKTMTYEEKVQYYDIAT 117
Query: 112 KRKLDYEKLMTAYNKK 127
K++ +++ M +NKK
Sbjct: 118 KKREEFDSAMAEFNKK 133
>gi|357135842|ref|XP_003569517.1| PREDICTED: high mobility group B protein 14-like [Brachypodium
distachyon]
Length = 127
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 54/77 (70%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DP +PK+PP+AFF F+E+FR +K E+P+VK++ +G+A GEKW + EK + A
Sbjct: 39 DPRRPKKPPTAFFYFMEDFRDKFKAENPSVKSMQDIGRACGEKWNKMAFEEKVKYYDLAT 98
Query: 112 KRKLDYEKLMTAYNKKQ 128
+R+ ++EK M YNKK+
Sbjct: 99 ERRAEFEKAMAQYNKKK 115
>gi|410930542|ref|XP_003978657.1| PREDICTED: high mobility group protein B2-like [Takifugu rubripes]
Length = 201
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
+KDPN PKRPPSAFFVF E+R KQ++P + ++ K GE W LT +EK P+E K
Sbjct: 91 RKDPNAPKRPPSAFFVFCSEYRPSVKQQYPGL-SIGDCAKKLGEMWSKLTQSEKQPYEEK 149
Query: 110 AAKRKLDYEKLMTAY 124
A K + Y++ M AY
Sbjct: 150 AQKLREKYDRDMVAY 164
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFEA 108
+KD NKPK SA+ F++ R+ +++++P + K E+WK L+ ++K FE
Sbjct: 3 RKDVNKPKGKTSAYAFFVQTCREEHRKKNPEQSVNFAEFSKKCSERWKGLSASDKKCFED 62
Query: 109 KAAKRKLDYEKLMTAY 124
A K+ Y + M Y
Sbjct: 63 MAKADKVRYNREMRDY 78
>gi|223942599|gb|ACN25383.1| unknown [Zea mays]
gi|414881085|tpg|DAA58216.1| TPA: hypothetical protein ZEAMMB73_949955 [Zea mays]
Length = 118
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 51/72 (70%), Gaps = 2/72 (2%)
Query: 30 KAVLKASR-SSNKRTKNVKSAKK-DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAV 87
K V A R SS KR K A K DP PK+PP+AFF F+E+FRK+YKQE P+VK++ +
Sbjct: 13 KTVAMAPRPSSTKRKPRPKPAGKGDPRAPKKPPTAFFYFMEDFRKIYKQEKPSVKSMQEI 72
Query: 88 GKAGGEKWKSLT 99
GKA GEKW ++T
Sbjct: 73 GKACGEKWNTMT 84
>gi|225195617|gb|ACN82086.1| high-mobility group box 1 [Carassius auratus]
gi|225195619|gb|ACN82087.1| high-mobility group box 1 [Megalobrama amblycephala]
gi|225195623|gb|ACN82089.1| high-mobility group box 1 [Carassius auratus x Megalobrama
amblycephala]
Length = 193
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F EFR K+E P + ++ V K GE W + EK PFE KA
Sbjct: 78 KDPNAPKRPPSAFFIFCSEFRPKVKEETPGL-SIGDVAKKLGEMWNKTSAEEKQPFEKKA 136
Query: 111 AKRKLDYEKLMTAYNKK 127
A+ K YEK +TAY K
Sbjct: 137 ARLKEKYEKDITAYRSK 153
Score = 38.5 bits (88), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 61 SAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKLDYEK 119
S++ F++ R+ +K++HP S K E+WK+++ EK FE A + K+ YE+
Sbjct: 2 SSYAYFVQTCREEHKKKHPEATVNFSEFSKKCSERWKTMSAKEKGKFEDMAKQDKVRYER 61
Query: 120 LMTAY 124
M Y
Sbjct: 62 EMKNY 66
>gi|348543650|ref|XP_003459296.1| PREDICTED: high mobility group protein B2-like isoform 1
[Oreochromis niloticus]
Length = 200
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
+KDPN PKRPPSAFFVF E+R KQ++P + ++ K GE W L+ +EK P+E K
Sbjct: 91 RKDPNAPKRPPSAFFVFCSEYRPSVKQQYPGL-SIGDCAKKLGEMWSKLSQSEKQPYEEK 149
Query: 110 AAKRKLDYEKLMTAY 124
A K + Y++ M AY
Sbjct: 150 AQKLREKYDRDMVAY 164
Score = 38.5 bits (88), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFEA 108
+KD NKPK SA+ F++ R+ +++++P + K E+WK+L+ ++K FE
Sbjct: 3 RKDINKPKGKTSAYAFFVQTCREEHRKKNPEQSVNFAEFSKKCSERWKALSPSDKKCFED 62
Query: 109 KAAKRKLDYEKLMTAY 124
A K+ Y + M Y
Sbjct: 63 MAKADKVRYNREMKDY 78
>gi|432953329|ref|XP_004085352.1| PREDICTED: high mobility group protein B2-like isoform 1 [Oryzias
latipes]
Length = 200
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
+KDPN PKRPPSAFFVF E+R KQ++P + ++ K GE W L+ +EK P+E K
Sbjct: 91 RKDPNAPKRPPSAFFVFCSEYRPSVKQQYPGL-SIGDCAKKLGEMWSKLSQSEKQPYEEK 149
Query: 110 AAKRKLDYEKLMTAY 124
A K + Y++ M AY
Sbjct: 150 AQKLREKYDRDMVAY 164
Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFEA 108
+KD NKPK SA+ F++ R+ +++++P + K E+WK+L+ ++K FE
Sbjct: 3 RKDVNKPKGKTSAYAFFVQTCREEHRKKNPEQSVNFAEFSKKCSERWKALSPSDKKCFED 62
Query: 109 KAAKRKLDYEKLMTAY 124
A K+ Y + M Y
Sbjct: 63 MAKADKVRYNREMCDY 78
>gi|326525246|dbj|BAK07893.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 215
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 49/64 (76%), Gaps = 2/64 (3%)
Query: 55 KPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPF--EAKAAK 112
K KRPP+AFF+F+++FR +K HP+ K V+AVGKA GEKW+S+T+ EK P+ +AK K
Sbjct: 100 KAKRPPTAFFLFMKDFRVEFKTSHPDEKGVAAVGKAAGEKWRSMTEEEKKPYNDQAKELK 159
Query: 113 RKLD 116
+LD
Sbjct: 160 AQLD 163
>gi|195618458|gb|ACG31059.1| HMG1/2-like protein [Zea mays]
gi|195640852|gb|ACG39894.1| HMG1/2-like protein [Zea mays]
gi|223975443|gb|ACN31909.1| unknown [Zea mays]
gi|413925109|gb|AFW65041.1| HMG type nucleosome/chromatin assembly factor DNucleasome/chromatin
assembly factor D protein NFD106 [Zea mays]
Length = 212
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 55/81 (67%)
Query: 38 SSNKRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKS 97
S++++ + K K KR P+AFF+F+++FRK +K HP+ K+V+ V K GGE+WKS
Sbjct: 74 SADRKKSSAKGGGNKDAKRKRSPTAFFLFMDDFRKEFKATHPDNKSVATVAKEGGERWKS 133
Query: 98 LTDAEKAPFEAKAAKRKLDYE 118
+TD EK P+ KAA+ K + E
Sbjct: 134 MTDEEKKPYIEKAAELKAEAE 154
>gi|225195621|gb|ACN82088.1| high-mobility group box 1 [Carassius auratus x Megalobrama
amblycephala]
Length = 193
Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F EFR K+E P + ++ V K GE W + EK P+E KA
Sbjct: 78 KDPNAPKRPPSAFFIFCAEFRPKVKEETPGL-SIGDVAKKLGEMWNKTSSEEKQPYEKKA 136
Query: 111 AKRKLDYEKLMTAYNKK 127
A+ K YEK +TAY K
Sbjct: 137 ARLKEKYEKDITAYRSK 153
Score = 35.8 bits (81), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 61 SAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKLDYEK 119
S++ F++ R+ +K++HP S K E+WK+++ EK FE A K YE+
Sbjct: 2 SSYAYFVQTCREEHKKKHPEATVNFSEFSKKCSERWKTMSAKEKGKFEDMAKLDKARYER 61
Query: 120 LMTAY 124
M Y
Sbjct: 62 EMKNY 66
>gi|327296079|ref|XP_003232734.1| non-histone chromosomal protein 6 [Trichophyton rubrum CBS 118892]
gi|326465045|gb|EGD90498.1| non-histone chromosomal protein 6 [Trichophyton rubrum CBS 118892]
Length = 102
Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Query: 38 SSNKRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKS 97
++ K + V+ KKDPN PKR SA+ +F E R ++E+PN+ VGK GE+WK+
Sbjct: 7 TARKTKRGVEKKKKDPNAPKRGLSAYMIFANEQRAAVREENPNI-TFGQVGKVLGERWKA 65
Query: 98 LTDAEKAPFEAKAAKRKLDYEKLMTAYNKKQ 128
L+D ++ P+E KAA K YE AYN +Q
Sbjct: 66 LSDKQRVPYEEKAATDKQRYEDEKAAYNSRQ 96
>gi|162462896|ref|NP_001105076.1| nucleosome/chromatin assembly factor D [Zea mays]
gi|17017396|gb|AAL33652.1|AF440223_1 HMG type nucleosome/chromatin assembly factor D [Zea mays]
gi|22135475|gb|AAM93218.1|AF527617_1 nucleasome/chromatin assembly factor D protein NFD106 [Zea mays]
Length = 154
Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 55/81 (67%)
Query: 38 SSNKRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKS 97
S++++ + K K KR P+AFF+F+++FRK +K HP+ K+V+ V K GGE+WKS
Sbjct: 16 SADRKKSSAKGGGNKDAKRKRSPTAFFLFMDDFRKEFKATHPDNKSVATVAKEGGERWKS 75
Query: 98 LTDAEKAPFEAKAAKRKLDYE 118
+TD EK P+ KAA+ K + E
Sbjct: 76 MTDEEKKPYIEKAAELKAEAE 96
>gi|47190944|emb|CAF93003.1| unnamed protein product [Tetraodon nigroviridis]
Length = 204
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
+KDPN PKRPPSAFFVF E+R KQ+ P + ++ K GE W L+ +EK P+E K
Sbjct: 94 RKDPNAPKRPPSAFFVFCSEYRPSVKQQFPGL-SIGDCAKKLGEMWSKLSQSEKQPYEEK 152
Query: 110 AAKRKLDYEKLMTAY 124
A K + Y++ M AY
Sbjct: 153 AQKLREKYDRDMVAY 167
Score = 38.1 bits (87), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFEA 108
+KD NKPK SA+ F++ R+ +++++P + K E+WK+L+ +K FE
Sbjct: 6 RKDVNKPKGKTSAYAFFVQTCREEHRKKNPEQSVNFAEFSKKCSERWKALSAGDKKCFED 65
Query: 109 KAAKRKLDYEKLMTAY 124
A K+ Y + M Y
Sbjct: 66 MAKADKVRYNREMRDY 81
>gi|225708606|gb|ACO10149.1| High mobility group protein B2 [Osmerus mordax]
Length = 216
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
KKDPN PKRPPSAFFVF + R K EHP + ++ + K GE W T +K P+EAK
Sbjct: 90 KKDPNAPKRPPSAFFVFCSDHRARIKGEHPGI-SIGDIAKKLGELWSKQTPKDKVPYEAK 148
Query: 110 AAKRKLDYEKLMTAYNKK 127
A K K YEK + AY K
Sbjct: 149 AGKLKEKYEKDVAAYRAK 166
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFEAK 109
KDPNKP+ S++ F++ R+ +K++HP S K E+WK+++ EK FE
Sbjct: 4 KDPNKPRGKTSSYAFFVQTCREEHKKKHPGTSVNFSEFSKKCSERWKTMSAKEKVKFEDL 63
Query: 110 AAKRKLDYEKLMTAY 124
A K+ +++ M Y
Sbjct: 64 AKGDKVRFDREMKGY 78
>gi|242080163|ref|XP_002444850.1| hypothetical protein SORBIDRAFT_07g000230 [Sorghum bicolor]
gi|241941200|gb|EES14345.1| hypothetical protein SORBIDRAFT_07g000230 [Sorghum bicolor]
Length = 221
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 47/64 (73%)
Query: 55 KPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRK 114
K KR P+AFF+F+++FRK +K HP+ K+V+ V K GGEKWKS+TD EK P+ KAA+ K
Sbjct: 96 KRKRSPTAFFLFMDDFRKEFKAAHPDNKSVATVAKEGGEKWKSMTDEEKKPYVEKAAELK 155
Query: 115 LDYE 118
E
Sbjct: 156 AQAE 159
>gi|221221482|gb|ACM09402.1| High mobility group-T protein [Salmo salar]
Length = 203
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 50/77 (64%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRP SAFF+F +FR K E P + ++ V K GEKW +LT +K P+E KA
Sbjct: 89 KDPNAPKRPSSAFFIFCADFRPQVKGETPGL-SIGDVAKKLGEKWNNLTAEDKVPYEKKA 147
Query: 111 AKRKLDYEKLMTAYNKK 127
A+ K YEK +TAY K
Sbjct: 148 ARLKEKYEKDITAYRNK 164
Score = 45.1 bits (105), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFEAK 109
KDP KP+ S++ F++ R+ +K++HP S K E+W++++ EK FE
Sbjct: 3 KDPRKPRGKMSSYAYFVQTCREEHKKKHPEASVNFSEFSKKCSERWRTMSAKEKGKFEDL 62
Query: 110 AAKRKLDYEKLMTAY 124
A K+ YE+ M +Y
Sbjct: 63 AKLDKMRYEREMRSY 77
>gi|349604600|gb|AEQ00107.1| High mobility group protein B3-like protein, partial [Equus
caballus]
Length = 118
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
KKDPN PKRPPS FF+F EFR K +P + ++ V K GE W +L+D+EK P+ K
Sbjct: 4 KKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGI-SIGDVAKKLGEMWNNLSDSEKQPYNNK 62
Query: 110 AAKRKLDYEKLMTAYNKK 127
AAK K YEK + Y K
Sbjct: 63 AAKLKEKYEKDVADYKSK 80
>gi|296810682|ref|XP_002845679.1| non-histone chromosomal protein 6 [Arthroderma otae CBS 113480]
gi|238843067|gb|EEQ32729.1| non-histone chromosomal protein 6 [Arthroderma otae CBS 113480]
Length = 103
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Query: 44 KNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEK 103
+ V+ KKDPN PKR SA+ +F E R ++E+PN+ VGK GE+WK+L+D ++
Sbjct: 14 RGVEKKKKDPNAPKRGLSAYMIFANEQRAAVREENPNI-TFGQVGKVLGERWKALSDKQR 72
Query: 104 APFEAKAAKRKLDYEKLMTAYNKKQ 128
P+E KAA K YE AYN +Q
Sbjct: 73 VPYEEKAATDKQRYEDEKAAYNSRQ 97
>gi|387016392|gb|AFJ50315.1| High mobility group protein B1 [Crotalus adamanteus]
Length = 215
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F E+R K EHP + ++ V K GE W + + +K PFE KA
Sbjct: 90 KDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTSSEDKQPFEKKA 148
Query: 111 AKRKLDYEKLMTAYNKK 127
K K YEK + AY K
Sbjct: 149 GKLKEKYEKDIAAYRAK 165
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DP KP+ S++ F++ R+ +K++HP+ S K E+WK+++ EK FE
Sbjct: 2 GKGDPKKPRGKMSSYAYFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K+ YE+ M Y
Sbjct: 62 DMARADKVRYEREMKTY 78
>gi|357144307|ref|XP_003573245.1| PREDICTED: high mobility group B protein 7-like [Brachypodium
distachyon]
Length = 218
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 47/65 (72%), Gaps = 2/65 (3%)
Query: 54 NKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPF--EAKAA 111
N KRPP+AFF+F+++FR +K HP+ K VSAVGKA G KWK++TD EK P+ +AK
Sbjct: 99 NGKKRPPTAFFIFMKDFRLEFKASHPDEKGVSAVGKAAGVKWKAMTDEEKKPYLDQAKEL 158
Query: 112 KRKLD 116
K K D
Sbjct: 159 KAKFD 163
>gi|1085210|pir||S48708 high-mobility-group-1 protein - trout
Length = 204
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 50/77 (64%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRP SAFF+F +FR K E P + ++ V K GEKW +LT +K P+E KA
Sbjct: 89 KDPNAPKRPSSAFFIFCADFRPQVKGETPGL-SIGDVAKKLGEKWNNLTAEDKVPYEKKA 147
Query: 111 AKRKLDYEKLMTAYNKK 127
+K K YEK +TAY K
Sbjct: 148 SKLKEKYEKDITAYRNK 164
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFEAK 109
KDP KP+ S++ F++ R +K++HP S K E+WK+++ EK FE
Sbjct: 3 KDPRKPRGKMSSYAYFVQTCRIEHKKKHPEASVNFSEFSKKCSERWKTMSAKEKGKFEDL 62
Query: 110 AAKRKLDYEKLMTAY 124
A K+ YE+ M +Y
Sbjct: 63 AKLDKVRYEREMRSY 77
>gi|609551|gb|AAA58771.1| HMG-1 [Oncorhynchus mykiss]
Length = 204
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 50/77 (64%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRP SAFF+F +FR K E P + ++ V K GEKW +LT +K P+E KA
Sbjct: 89 KDPNAPKRPSSAFFIFCADFRPQVKGETPGL-SIGDVAKKLGEKWNNLTAEDKVPYEKKA 147
Query: 111 AKRKLDYEKLMTAYNKK 127
+K K YEK +TAY K
Sbjct: 148 SKLKEKYEKDITAYRNK 164
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFEAK 109
KDP KP+ S++ F++ R+ +K++HP S K E+WK+++ EK FE
Sbjct: 3 KDPRKPRGKMSSYAYFVQTCREEHKKKHPEASVNFSEFSKKCSERWKTMSAKEKGKFEDL 62
Query: 110 AAKRKLDYEKLMTAY 124
A K+ YE+ M +Y
Sbjct: 63 AKLDKVRYEREMRSY 77
>gi|222087985|gb|ACM41855.1| high mobility group box 2-like protein [Epinephelus coioides]
Length = 212
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/76 (52%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKRPPSAFFVF E R K+E P + ++ K GE W + + EKAP+EAKAA
Sbjct: 87 DPNAPKRPPSAFFVFCSEHRPRIKEECPGI-SIGDTAKKLGELWSTQSSKEKAPYEAKAA 145
Query: 112 KRKLDYEKLMTAYNKK 127
K K YEK + AY K
Sbjct: 146 KLKEKYEKEVAAYRAK 161
Score = 42.0 bits (97), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 54 NKPKRPPSAFFVFLEEFRKVYKQEHPNVK-AVSAVGKAGGEKWKSLTDAEKAPFEAKAAK 112
NKP+ S++ F+ + R+ +K++HP + K E+WK+++ EKA FE A
Sbjct: 1 NKPRGKTSSYAFFIADCREEHKRKHPGTSVGFAEFSKKCSERWKTMSAKEKAKFEELAKT 60
Query: 113 RKLDYEKLMTAY 124
K+ Y++ M Y
Sbjct: 61 DKIRYDREMKTY 72
>gi|18403553|ref|NP_565788.1| high mobility group (HMG1/2) domain-containing protein [Arabidopsis
thaliana]
gi|75219838|sp|O64702.2|HMG14_ARATH RecName: Full=High mobility group B protein 14; AltName:
Full=Nucleosome/chromatin assembly factor group D 14
gi|20197083|gb|AAC26692.2| putative HMG protein [Arabidopsis thaliana]
gi|20197160|gb|AAM14948.1| putative HMG protein [Arabidopsis thaliana]
gi|21536857|gb|AAM61189.1| putative HMG protein [Arabidopsis thaliana]
gi|26452914|dbj|BAC43535.1| putative HMG protein [Arabidopsis thaliana]
gi|28973511|gb|AAO64080.1| putative HMG protein [Arabidopsis thaliana]
gi|330253881|gb|AEC08975.1| high mobility group (HMG1/2) domain-containing protein [Arabidopsis
thaliana]
Length = 151
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 52/72 (72%)
Query: 56 PKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKL 115
PK+P +AFF FL++FRK Y++E+P+VK++ +GK GEKWK++T EK + A +++
Sbjct: 63 PKKPATAFFFFLDDFRKQYQEENPDVKSMREIGKTCGEKWKTMTYEEKVKYYDIATEKRE 122
Query: 116 DYEKLMTAYNKK 127
++ + MT Y K+
Sbjct: 123 EFHRAMTEYTKR 134
>gi|388511193|gb|AFK43658.1| unknown [Lotus japonicus]
Length = 92
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/59 (59%), Positives = 47/59 (79%)
Query: 67 LEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKLDYEKLMTAYN 125
+ EFR +K+++PN K+V+AVGKA G KWKS+TDAEKAP+ A+A K K +YEK + AYN
Sbjct: 1 MSEFRTQFKKDNPNNKSVAAVGKAAGSKWKSMTDAEKAPYVARAEKAKEEYEKTLRAYN 59
>gi|168056739|ref|XP_001780376.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668218|gb|EDQ54830.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 207
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/76 (56%), Positives = 52/76 (68%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKRP S F VF+E FRK YK +P K V+A KAGGEKWK +T+ E+AP+ A
Sbjct: 107 DPNAPKRPASGFLVFMESFRKTYKDANPESKGVAAAAKAGGEKWKQMTEEERAPYNKDAE 166
Query: 112 KRKLDYEKLMTAYNKK 127
RKL+YE+ MT Y K
Sbjct: 167 ARKLNYEQAMTNYKNK 182
>gi|297826905|ref|XP_002881335.1| high mobility group family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297327174|gb|EFH57594.1| high mobility group family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 152
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 52/73 (71%), Gaps = 1/73 (1%)
Query: 56 PKRPPSAFFVFLEEFRKVYKQEHPNVKAV-SAVGKAGGEKWKSLTDAEKAPFEAKAAKRK 114
PK+PP+AFF FLE+FRK Y++E+P VK++ +GK GEKWK++T EK + A +++
Sbjct: 64 PKKPPTAFFFFLEDFRKQYQEENPEVKSMREVIGKTCGEKWKTMTYEEKVKYYDIATEKR 123
Query: 115 LDYEKLMTAYNKK 127
++ + MT Y K+
Sbjct: 124 EEFHRAMTEYTKR 136
>gi|410932269|ref|XP_003979516.1| PREDICTED: high mobility group-T protein-like [Takifugu rubripes]
gi|410933007|ref|XP_003979884.1| PREDICTED: high mobility group-T protein-like [Takifugu rubripes]
Length = 209
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKRPPSAFF+F EFR K EHP + + V K GE W + +K P+E KA+
Sbjct: 95 DPNAPKRPPSAFFIFCSEFRPKVKGEHPGL-TIGEVAKKLGELWNNTNSEDKQPYEKKAS 153
Query: 112 KRKLDYEKLMTAYNKK 127
K K YEK + AY +K
Sbjct: 154 KLKEKYEKDVAAYRQK 169
Score = 38.9 bits (89), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 47 KSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAP 105
+ + ++ KP+ S++ F++ R+ +K++HP+ S + E+WK+++ EK
Sbjct: 3 RDSGREAGKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSRKCSERWKTMSVKEKGK 62
Query: 106 FEAKAAKRKLDYEKLMTAY 124
FE A + K+ Y++ M Y
Sbjct: 63 FEDLAKQDKVRYDREMMDY 81
>gi|326475470|gb|EGD99479.1| nucleosome binding protein [Trichophyton tonsurans CBS 112818]
Length = 102
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Query: 46 VKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAP 105
V+ KKDPN PKR SA+ +F E R ++E+PN+ VGK GE+WK+L+D ++ P
Sbjct: 15 VEKKKKDPNAPKRGLSAYMIFANEQRAAVREENPNI-TFGQVGKVLGERWKALSDKQRVP 73
Query: 106 FEAKAAKRKLDYEKLMTAYNKKQ 128
+E KAA K YE AYN +Q
Sbjct: 74 YEEKAATDKQRYEDEKAAYNSRQ 96
>gi|185135647|ref|NP_001118186.1| high mobility group-T protein [Oncorhynchus mykiss]
gi|123382|sp|P07746.2|HMGT_ONCMY RecName: Full=High mobility group-T protein; Short=HMG-T; AltName:
Full=HMG-T1; Short=HMG-1
gi|64328|emb|CAA26500.1| unnamed protein product [Oncorhynchus mykiss]
Length = 204
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 50/77 (64%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRP SAFF+F +FR K E P + ++ V K GEKW +LT +K P+E KA
Sbjct: 89 KDPNAPKRPSSAFFIFCADFRPQVKGETPGL-SIGDVAKKLGEKWNNLTAEDKVPYEKKA 147
Query: 111 AKRKLDYEKLMTAYNKK 127
++ K YEK +TAY K
Sbjct: 148 SRLKEKYEKDITAYRNK 164
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFEAK 109
KDP KP+ S++ F++ R+ +K++HP S K E+WK+++ EK FE
Sbjct: 3 KDPRKPRGKMSSYAYFVQTRREEHKKKHPEASVNFSEFSKKCSERWKTMSAKEKGKFEDL 62
Query: 110 AAKRKLDYEKLMTAY 124
A K+ YE+ M +Y
Sbjct: 63 AKLDKVRYEREMRSY 77
>gi|302497713|ref|XP_003010856.1| hypothetical protein ARB_02895 [Arthroderma benhamiae CBS 112371]
gi|291174401|gb|EFE30216.1| hypothetical protein ARB_02895 [Arthroderma benhamiae CBS 112371]
Length = 106
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Query: 37 RSSNKRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWK 96
+++ K + V+ KKDPN PKR SA+ +F E R ++E+PN+ VGK GE+WK
Sbjct: 5 KTTRKTKRGVEKKKKDPNAPKRGLSAYMIFANEQRAAVREENPNI-TFGQVGKVLGERWK 63
Query: 97 SLTDAEKAPFEAKAAKRKLDYEKLMTAYN 125
+L+D ++ P+E KAA K YE AYN
Sbjct: 64 ALSDKQRVPYEEKAATDKQRYEDEKAAYN 92
>gi|148234528|ref|NP_001080836.1| high mobility group box 1 [Xenopus laevis]
gi|32450384|gb|AAH54148.1| Hmgb1-prov protein [Xenopus laevis]
Length = 211
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F EFR K EHP + + K GE W + +K PFE KA
Sbjct: 90 KDPNAPKRPPSAFFLFCSEFRPKIKGEHPGS-TIGDIAKKLGEMWNNTATDDKLPFERKA 148
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + AY K
Sbjct: 149 AKLKEKYEKDVAAYRAK 165
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DP KP+ S++ F++ R+ +K++HP+ + K E+WK+++ EK+ FE
Sbjct: 2 GKGDPKKPRGKMSSYAYFVQTCREEHKKKHPDASVNFAEFSKKCSERWKTMSAKEKSKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K+ YE+ M Y
Sbjct: 62 DMAKADKVRYEREMKTY 78
>gi|18420676|ref|NP_568431.1| high-mobility group B6 protein [Arabidopsis thaliana]
gi|75245985|sp|Q8LDF9.1|HMGB7_ARATH RecName: Full=High mobility group B protein 7; AltName:
Full=Nucleosome/chromatin assembly factor group D 07;
Short=Nucleosome/chromatin assembly factor group D 7
gi|21554154|gb|AAM63233.1| unknown [Arabidopsis thaliana]
gi|26452394|dbj|BAC43282.1| unknown protein [Arabidopsis thaliana]
gi|332005781|gb|AED93164.1| high-mobility group B6 protein [Arabidopsis thaliana]
Length = 241
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
Query: 41 KRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTD 100
K+T + K + NKPKRP +AFF+F+ +FRK +K EH A A K GGEKWKSLT+
Sbjct: 100 KKTNDEKKSSSTSNKPKRPLTAFFIFMSDFRKTFKSEHNGSLAKDA-AKIGGEKWKSLTE 158
Query: 101 AEKAPFEAKAAKRKLDYEKLM 121
EK + KAA+ K +Y K +
Sbjct: 159 EEKKVYLDKAAELKAEYNKSL 179
>gi|49258306|pdb|1J3C|A Chain A, Solution Structure Of The C-Terminal Domain Of The Hmgb2
Length = 79
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
KKDPN PKRPPSAFF+F E+R K EHP + ++ K GE W + +K P+E K
Sbjct: 3 KKDPNAPKRPPSAFFLFCSEYRPKIKSEHPGL-SIGDTAKKLGEMWSEQSAKDKQPYEQK 61
Query: 110 AAKRKLDYEKLMTAYNKK 127
AAK K YEK + AY K
Sbjct: 62 AAKLKEKYEKDIAAYRAK 79
>gi|431920081|gb|ELK18129.1| High mobility group protein B3 [Pteropus alecto]
Length = 255
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKRPPS FF+F EFR K +P + ++ V K GE W +L+D+EK P+ KAA
Sbjct: 141 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGI-SIGDVAKKLGEMWNNLSDSEKQPYNNKAA 199
Query: 112 KRKLDYEKLMTAYNKK 127
K K YEK + Y K
Sbjct: 200 KLKEKYEKDVADYKSK 215
>gi|392333067|ref|XP_003752781.1| PREDICTED: high mobility group protein B3-like [Rattus norvegicus]
gi|392353165|ref|XP_001067503.2| PREDICTED: high mobility group protein B3-like [Rattus norvegicus]
Length = 212
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
KKDPN PKRPPS FF+F EFR K +P + ++ V K GE W +L+D+EK P+ K
Sbjct: 101 KKDPNAPKRPPSGFFLFCSEFRPKIKSANPGI-SIEDVVKKLGEMWNNLSDSEKQPYMTK 159
Query: 110 AAKRKLDYEKLMTAY 124
AAK K YEK + Y
Sbjct: 160 AAKLKEKYEKDVADY 174
>gi|347921933|ref|NP_990626.2| high mobility group protein B3 [Gallus gallus]
Length = 217
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKRPPSAFF+F EFR K +P + ++ V K GE W +L+D EK P+ KAA
Sbjct: 104 DPNAPKRPPSAFFLFCSEFRPKIKSTNPGI-SIGDVAKKLGEMWNNLSDGEKQPYNNKAA 162
Query: 112 KRKLDYEKLMTAYNKK 127
K K YEK + Y K
Sbjct: 163 KLKEKYEKDVADYKSK 178
Score = 35.4 bits (80), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 61 SAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKLDYEK 119
SA+ F++ R+ +K+++P V + K E+WK+++ EKA F+ A K+ Y++
Sbjct: 29 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSSKEKAKFDEMAKADKVRYDR 88
Query: 120 LMTAY 124
M Y
Sbjct: 89 EMKDY 93
>gi|356528116|ref|XP_003532651.1| PREDICTED: high mobility group protein B2-like [Glycine max]
Length = 234
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 68/116 (58%), Gaps = 4/116 (3%)
Query: 17 VVKPVEDRAAGKRKAVLKASRSSNKRTKNVKSAKKDPNKPKRPPSAFF----VFLEEFRK 72
+V +E KR SR K + D KPK+ PSAFF +F+E+FRK
Sbjct: 6 LVLRIESNEGIKRSEWQTNSRKKPKAKQKKNKQMFDAMKPKKSPSAFFPLFSLFMEDFRK 65
Query: 73 VYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKLDYEKLMTAYNKKQ 128
+++++P++K++ +GKA GEKWK++T EK + A+++++++++ M +N K
Sbjct: 66 EFQEQNPDIKSMYDIGKACGEKWKTMTYEEKVKYYDIASEKRIEFDRAMAKFNNKM 121
>gi|148235321|ref|NP_001089163.1| high mobility group box 3 [Xenopus laevis]
gi|55824420|gb|AAV66347.1| high mobility group B3b protein [Xenopus laevis]
gi|114108280|gb|AAI23148.1| LOC734200 protein [Xenopus laevis]
Length = 201
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPS FF+F EFR K +P + ++ + K GE W +L+D EK P+ KA
Sbjct: 88 KDPNAPKRPPSGFFLFCSEFRPKIKSTNPGI-SIGDIAKKLGEMWNNLSDGEKQPYNNKA 146
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + Y K
Sbjct: 147 AKLKEKYEKDVADYKSK 163
Score = 42.7 bits (99), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
AK+DP KPK SA+ F++ R+ +K+++P + + K E+W+S++ EK+ FE
Sbjct: 2 AKRDPKKPKGKMSAYAYFVQTCREEHKKKNPEIPVNFAEFSKKCSERWRSMSGKEKSKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K+ Y++ M +
Sbjct: 62 DLAKADKVRYDREMKDF 78
>gi|310793467|gb|EFQ28928.1| HMG box protein [Glomerella graminicola M1.001]
Length = 103
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 53/82 (64%), Gaps = 1/82 (1%)
Query: 47 KSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPF 106
K AKKDPN PKR SA+ F E R+ ++E+P + + VGK GE+WK+L D ++AP+
Sbjct: 17 KRAKKDPNAPKRGLSAYMFFANEQRENVREENPGI-SFGQVGKILGERWKALNDKQRAPY 75
Query: 107 EAKAAKRKLDYEKLMTAYNKKQ 128
EAKAA K YE AYN +Q
Sbjct: 76 EAKAATDKKRYEDEKQAYNAEQ 97
>gi|297812491|ref|XP_002874129.1| hypothetical protein ARALYDRAFT_910356 [Arabidopsis lyrata subsp.
lyrata]
gi|297319966|gb|EFH50388.1| hypothetical protein ARALYDRAFT_910356 [Arabidopsis lyrata subsp.
lyrata]
Length = 193
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
Query: 41 KRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTD 100
K+T + K + NKPKRP +AFF+F+ +FRK +K EH A A K GGEKWKSLT+
Sbjct: 100 KKTNDEKKSSSTSNKPKRPLTAFFIFMNDFRKTFKTEHNGSLAKDA-AKIGGEKWKSLTE 158
Query: 101 AEKAPFEAKAAKRKLDYEKLM 121
EK + KAA+ K +Y K +
Sbjct: 159 EEKKVYLDKAAELKAEYNKSL 179
>gi|729728|sp|P40618.2|HMGB3_CHICK RecName: Full=High mobility group protein B3; AltName: Full=High
mobility group protein 2a; Short=HMG-2a; AltName:
Full=High mobility group protein 4; Short=HMG-4
gi|63494|emb|CAA45065.1| HMG2a [Gallus gallus]
Length = 202
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKRPPSAFF+F EFR K +P + ++ V K GE W +L+D EK P+ KAA
Sbjct: 89 DPNAPKRPPSAFFLFCSEFRPKIKSTNPGI-SIGDVAKKLGEMWNNLSDGEKQPYNNKAA 147
Query: 112 KRKLDYEKLMTAYNKK 127
K K YEK + Y K
Sbjct: 148 KLKEKYEKDVADYKSK 163
Score = 35.0 bits (79), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 61 SAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKLDYEK 119
SA+ F++ R+ +K+++P V + K E+WK+++ EKA F+ A K+ Y++
Sbjct: 14 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSSKEKAKFDEMAKADKVRYDR 73
Query: 120 LMTAY 124
M Y
Sbjct: 74 EMKDY 78
>gi|221220618|gb|ACM08970.1| High mobility group protein B3 [Salmo salar]
gi|223646914|gb|ACN10215.1| High mobility group protein B3 [Salmo salar]
gi|223672777|gb|ACN12570.1| High mobility group protein B3 [Salmo salar]
Length = 201
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Query: 47 KSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPF 106
K A KDPN PKRPPS FFVF E R K +HPN + V K GE W +LTD+ K P+
Sbjct: 86 KKALKDPNAPKRPPSGFFVFCAEQRPKIKAQHPNF-GIGDVAKKLGEMWNNLTDSNKQPY 144
Query: 107 EAKAAKRKLDYEKLMTAY 124
AKA K K Y+K + Y
Sbjct: 145 LAKANKLKEKYQKDVADY 162
Score = 41.6 bits (96), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
AK D KPK SA+ F++ R+ +K ++P + S K +WK+++ EK+ FE
Sbjct: 2 AKGDARKPKGKMSAYAYFVQTCREEHKNKNPEIPVNFSEFSKKCSGRWKTMSPKEKSKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
+A + K Y+ MT+Y
Sbjct: 62 DQAKQDKARYDSEMTSY 78
>gi|221219912|gb|ACM08617.1| High mobility group protein B3 [Salmo salar]
Length = 201
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Query: 47 KSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPF 106
K A KDPN PKRPPS FFVF E R K +HPN + V K GE W +LTD+ K P+
Sbjct: 86 KKALKDPNAPKRPPSGFFVFCAEQRPKIKAQHPNF-GIGDVAKKLGEMWNNLTDSNKQPY 144
Query: 107 EAKAAKRKLDYEKLMTAY 124
AKA K K Y+K + Y
Sbjct: 145 LAKANKLKEKYQKDVADY 162
Score = 41.6 bits (96), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
AK D KPK SA+ F++ R+ +K ++P + S K +WK+++ EK+ FE
Sbjct: 2 AKGDARKPKGKMSAYAYFVQTCREEHKNKNPEIPVNFSEFSKKCSGRWKTMSPKEKSKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
+A + K Y+ MT+Y
Sbjct: 62 DQAKQDKARYDSEMTSY 78
>gi|221220328|gb|ACM08825.1| High mobility group protein B3 [Salmo salar]
Length = 203
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Query: 47 KSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPF 106
K A KDPN PKRPPS FFVF E R K +HPN + V K GE W +LTD+ K P+
Sbjct: 86 KKALKDPNAPKRPPSGFFVFCAEQRPKIKAQHPNF-GIGDVAKKLGEMWNNLTDSNKQPY 144
Query: 107 EAKAAKRKLDYEKLMTAY 124
AKA K K Y+K + Y
Sbjct: 145 LAKANKLKEKYQKDVADY 162
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
AK D KPK SA+ F++ R+ +K ++P + S K +WK+++ EK+ FE
Sbjct: 2 AKGDARKPKGKMSAYAYFVQTCREEHKNKNPEIPVNFSEFSKKCSGRWKTMSPKEKSKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
+A + K Y+ MT+Y
Sbjct: 62 DQAKQDKARYDLEMTSY 78
>gi|9759080|dbj|BAB09558.1| unnamed protein product [Arabidopsis thaliana]
Length = 226
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Query: 41 KRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTD 100
K+T + K + NKPKRP +AFF+F+ +FRK +K EH N K GGEKWKSLT+
Sbjct: 85 KKTNDEKKSSSTSNKPKRPLTAFFIFMSDFRKTFKSEH-NGSLAKDAAKIGGEKWKSLTE 143
Query: 101 AEKAPFEAKAAKRKLDYEKLM 121
EK + KAA+ K +Y K +
Sbjct: 144 EEKKVYLDKAAELKAEYNKSL 164
>gi|410917315|ref|XP_003972132.1| PREDICTED: high mobility group protein B2-like [Takifugu rubripes]
Length = 214
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
KKDPN PKRPPSAFFVF + R K+++P + ++ + K GE W + +KAP+EA+
Sbjct: 89 KKDPNAPKRPPSAFFVFCSDHRPKIKEDNPGI-SIGDIAKKLGELWSTQGPKDKAPYEAR 147
Query: 110 AAKRKLDYEKLMTAY 124
AAK K YEK + AY
Sbjct: 148 AAKLKEKYEKDVAAY 162
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFEAK 109
KD +PK S++ F+ R +K++HP S K E+WK+++ EK+ FE
Sbjct: 2 KDHGRPKGKMSSYAFFVTTCRDEHKKKHPGTPVNFSEFSKKCSERWKNMSSKEKSKFEEL 61
Query: 110 AAKRKLDYEKLMTAY 124
A K+ Y++ M +Y
Sbjct: 62 AKTDKIRYDQEMQSY 76
>gi|357139210|ref|XP_003571177.1| PREDICTED: high mobility group B protein 13-like [Brachypodium
distachyon]
Length = 537
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 51/76 (67%), Gaps = 3/76 (3%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DP+KPK+P SA+FV+ +E R E NV +GK GE+WKS+TDA+KAP+E A+
Sbjct: 325 DPSKPKQPMSAYFVYSQERRAALVAEKKNV---PEIGKITGEEWKSMTDAQKAPYEEVAS 381
Query: 112 KRKLDYEKLMTAYNKK 127
K+K +Y K M Y +K
Sbjct: 382 KQKEEYHKQMEVYKQK 397
Score = 49.3 bits (116), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN+PK+P S+F +F +E RK +E P V S + KWK L+ EK + KAA
Sbjct: 450 DPNRPKKPASSFLLFSKEARKQLVEERPGVNN-STINALISVKWKELSGTEKKTWSEKAA 508
Query: 112 KRKLDYEKLMTAYN 125
+ Y++ M Y
Sbjct: 509 EGMAAYKREMEEYT 522
>gi|221219844|gb|ACM08583.1| High mobility group protein B2 [Salmo salar]
Length = 211
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
KKDPN PKRPPSAFFVF EFR KQE P ++ K G W T +K PFE K
Sbjct: 91 KKDPNAPKRPPSAFFVFSAEFRPTVKQEFPGC-SIGQCAKKLGIMWGQQTPTQKQPFEEK 149
Query: 110 AAKRKLDYEKLMTAY 124
A + + Y+K M AY
Sbjct: 150 ALRLREKYDKDMAAY 164
Score = 40.0 bits (92), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFEA 108
K D NKPK SA+ F++ R+ +K++HP + K E+W++ T ++ FE
Sbjct: 3 KGDVNKPKGKTSAYAFFVQTCREEHKRKHPEQSVNFAEFSKQCSERWRASTATDRRRFED 62
Query: 109 KAAKRKLDYEKLMTAY 124
A K+ YE+ M Y
Sbjct: 63 MAKNDKVRYERDMRGY 78
>gi|358391632|gb|EHK41036.1| hypothetical protein TRIATDRAFT_259074 [Trichoderma atroviride IMI
206040]
Length = 101
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 52/82 (63%), Gaps = 1/82 (1%)
Query: 47 KSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPF 106
K AKKDPN PKR SA+ F E R+ ++E+P + + VGK GE+WK+L D ++AP+
Sbjct: 16 KRAKKDPNAPKRGLSAYMFFANEQRENVREENPGI-SFGQVGKLLGERWKALNDKQRAPY 74
Query: 107 EAKAAKRKLDYEKLMTAYNKKQ 128
EAKAA K YE AYN Q
Sbjct: 75 EAKAAADKKRYEDEKQAYNADQ 96
>gi|392354293|ref|XP_003751730.1| PREDICTED: high mobility group protein B3-like isoform 1 [Rattus
norvegicus]
Length = 241
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKRPPS FF+F EFR K +P + ++ V K GE W +L+D+EK P+ KAA
Sbjct: 130 DPNAPKRPPSGFFLFCSEFRPKIKSANPGI-SIGDVAKKLGEMWNNLSDSEKQPYMTKAA 188
Query: 112 KRKLDYEKLMTAYNKK 127
K K YEK + Y K
Sbjct: 189 KLKEKYEKDVADYKSK 204
>gi|57112857|ref|XP_538194.1| PREDICTED: high mobility group protein B3 [Canis lupus familiaris]
gi|338729649|ref|XP_001505130.3| PREDICTED: high mobility group protein B3-like isoform 1 [Equus
caballus]
Length = 201
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKRPPS FF+F EFR K +P + ++ V K GE W +L+D+EK P+ KAA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGI-SIGDVAKKLGEMWNNLSDSEKQPYNNKAA 147
Query: 112 KRKLDYEKLMTAYNKK 127
K K YEK + Y K
Sbjct: 148 KLKEKYEKDVADYKSK 163
>gi|417396975|gb|JAA45521.1| Putative nucleosome-binding factor spn pob3 subunit [Desmodus
rotundus]
Length = 200
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKRPPS FF+F EFR K +P + ++ V K GE W +L+D+EK P+ KAA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGI-SIGDVAKKLGEMWNNLSDSEKQPYNNKAA 147
Query: 112 KRKLDYEKLMTAYNKK 127
K K YEK + Y K
Sbjct: 148 KLKEKYEKDVADYKSK 163
>gi|301778413|ref|XP_002924621.1| PREDICTED: high mobility group protein B3-like [Ailuropoda
melanoleuca]
Length = 201
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKRPPS FF+F EFR K +P + ++ V K GE W +L+D+EK P+ KAA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGI-SIGDVAKKLGEMWNNLSDSEKQPYNNKAA 147
Query: 112 KRKLDYEKLMTAYNKK 127
K K YEK + Y K
Sbjct: 148 KLKEKYEKDVADYKSK 163
>gi|315051466|ref|XP_003175107.1| non-histone chromosomal protein 6 [Arthroderma gypseum CBS 118893]
gi|311340422|gb|EFQ99624.1| non-histone chromosomal protein 6 [Arthroderma gypseum CBS 118893]
Length = 102
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 58/92 (63%), Gaps = 2/92 (2%)
Query: 37 RSSNKRTK-NVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKW 95
+S+ ++TK V+ KKDPN PKR SA+ +F E R ++E+P++ VGK GE+W
Sbjct: 5 KSTTRKTKRGVEKKKKDPNAPKRGLSAYMIFANEQRASVREENPSI-TFGQVGKVLGERW 63
Query: 96 KSLTDAEKAPFEAKAAKRKLDYEKLMTAYNKK 127
K+LTD ++ P+E KAA K YE AYN +
Sbjct: 64 KALTDKQRKPYEEKAATDKQRYEDEKAAYNSR 95
>gi|410989557|ref|XP_004001438.1| PREDICTED: LOW QUALITY PROTEIN: high mobility group protein B3
[Felis catus]
Length = 201
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKRPPS FF+F EFR K +P + ++ V K GE W +L+D+EK P+ KAA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGI-SIGDVAKKLGEMWNNLSDSEKQPYNNKAA 147
Query: 112 KRKLDYEKLMTAYNKK 127
K K YEK + Y K
Sbjct: 148 KLKEKYEKDVADYKSK 163
>gi|70999478|ref|XP_754458.1| nucleosome binding protein (Nhp6a) [Aspergillus fumigatus Af293]
gi|74674416|sp|Q4WY33.1|NHP6_ASPFU RecName: Full=Non-histone chromosomal protein 6
gi|66852095|gb|EAL92420.1| nucleosome binding protein (Nhp6a), putative [Aspergillus fumigatus
Af293]
gi|159127475|gb|EDP52590.1| nucleosome binding protein (Nhp6a), putative [Aspergillus fumigatus
A1163]
Length = 104
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Query: 38 SSNKRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKS 97
S+ +TK V+ KKDPN PKR SA+ F E R ++E+P + + VGK GE+WK+
Sbjct: 7 STRTKTKRVERKKKDPNAPKRGLSAYMFFANENRDKVREENPGI-SFGQVGKMLGERWKA 65
Query: 98 LTDAEKAPFEAKAAKRKLDYEKLMTAYNKKQ 128
L+D+E+ P+E KAA K YE +YN Q
Sbjct: 66 LSDSERRPYEEKAAADKKRYEDEKASYNAAQ 96
>gi|290560936|ref|NP_001166812.1| high mobility group box 3 [Rattus norvegicus]
gi|392354295|ref|XP_003751731.1| PREDICTED: high mobility group protein B3-like isoform 2 [Rattus
norvegicus]
gi|149027076|gb|EDL82825.1| rCG56793 [Rattus norvegicus]
gi|165971283|gb|AAI58740.1| Hmgb3 protein [Rattus norvegicus]
Length = 200
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKRPPS FF+F EFR K +P + ++ V K GE W +L+D+EK P+ KAA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSANPGI-SIGDVAKKLGEMWNNLSDSEKQPYMTKAA 147
Query: 112 KRKLDYEKLMTAYNKK 127
K K YEK + Y K
Sbjct: 148 KLKEKYEKDVADYKSK 163
>gi|291410190|ref|XP_002721383.1| PREDICTED: high-mobility group box 3 [Oryctolagus cuniculus]
Length = 215
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKRPPS FF+F EFR K +P + ++ V K GE W +L+D+EK P+ KAA
Sbjct: 104 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGI-SIGDVAKKLGEMWNNLSDSEKQPYITKAA 162
Query: 112 KRKLDYEKLMTAYNKK 127
K K YEK + Y K
Sbjct: 163 KLKEKYEKDVADYKSK 178
>gi|348551110|ref|XP_003461373.1| PREDICTED: high mobility group protein B3-like [Cavia porcellus]
Length = 202
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKRPPS FF+F EFR K +P + ++ V K GE W +L+D+EK P+ KAA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGI-SIGDVAKKLGEMWNNLSDSEKQPYITKAA 147
Query: 112 KRKLDYEKLMTAYNKK 127
K K YEK + Y K
Sbjct: 148 KLKEKYEKDVADYKSK 163
>gi|354495940|ref|XP_003510086.1| PREDICTED: high mobility group protein B3-like [Cricetulus griseus]
gi|344249016|gb|EGW05120.1| High mobility group protein B3 [Cricetulus griseus]
Length = 200
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKRPPS FF+F EFR K +P + ++ V K GE W +L+D+EK P+ KAA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGI-SIGDVAKKLGEMWNNLSDSEKQPYITKAA 147
Query: 112 KRKLDYEKLMTAYNKK 127
K K YEK + Y K
Sbjct: 148 KLKEKYEKDVADYKSK 163
>gi|355694844|gb|AER99804.1| high-mobility group box 3 [Mustela putorius furo]
Length = 197
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKRPPS FF+F EFR K +P + ++ V K GE W +L+D EK P+ KAA
Sbjct: 91 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGI-SIGDVAKKLGEMWNNLSDGEKQPYNNKAA 149
Query: 112 KRKLDYEKLMTAYNKK 127
K K YEK + Y K
Sbjct: 150 KLKEKYEKDVADYKSK 165
>gi|395545985|ref|XP_003774876.1| PREDICTED: high mobility group protein B3-like [Sarcophilus
harrisii]
Length = 201
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKRPPS FF+F EFR K +P + ++ V K GE W +L+D+EK P+ KAA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGI-SIGDVAKKLGEMWNNLSDSEKQPYNNKAA 147
Query: 112 KRKLDYEKLMTAYNKK 127
K K YEK + Y K
Sbjct: 148 KLKEKYEKDVADYKSK 163
>gi|149410917|ref|XP_001509199.1| PREDICTED: high mobility group protein B3-like isoform 1
[Ornithorhynchus anatinus]
gi|345306624|ref|XP_003428488.1| PREDICTED: high mobility group protein B3-like isoform 2
[Ornithorhynchus anatinus]
Length = 201
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKRPPS FF+F EFR K +P + ++ V K GE W +L+D+EK P+ KAA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGI-SIGDVAKKLGEMWNNLSDSEKQPYNNKAA 147
Query: 112 KRKLDYEKLMTAYNKK 127
K K YEK + Y K
Sbjct: 148 KLKEKYEKDVADYKSK 163
>gi|56384901|gb|AAV85889.1| high mobility group 1 protein [Pelodiscus sinensis]
Length = 202
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKRPPS FF+F EFR K +P + ++ V K GE W +L+D EK P+ KAA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGI-SIGDVAKKLGEMWNNLSDGEKQPYNNKAA 147
Query: 112 KRKLDYEKLMTAYNKK 127
K K YEK + Y K
Sbjct: 148 KLKEKYEKDVADYKSK 163
>gi|45361297|ref|NP_989226.1| high mobility group box 1 [Xenopus (Silurana) tropicalis]
gi|38969943|gb|AAH63332.1| high-mobility group box 1 [Xenopus (Silurana) tropicalis]
gi|89267209|emb|CAJ81415.1| high-mobility group box 1 [Xenopus (Silurana) tropicalis]
gi|89272910|emb|CAJ82928.1| high-mobility group box 1 [Xenopus (Silurana) tropicalis]
Length = 211
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F EFR K EHP + + K GE W + +K P+E KA
Sbjct: 90 KDPNAPKRPPSAFFLFCSEFRPKIKGEHPGS-TIGDIAKKLGEMWNNTATDDKLPYERKA 148
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + AY K
Sbjct: 149 AKLKEKYEKDVAAYRAK 165
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DP KP+ S++ F++ R+ +K++HP+ + K E+WK+++ EK+ FE
Sbjct: 2 GKGDPKKPRGKMSSYAYFVQTCREEHKKKHPDASVNFAEFSKKCSERWKTMSAKEKSKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K+ YE+ M Y
Sbjct: 62 DMAKADKVRYEREMKTY 78
>gi|346986304|ref|NP_001069753.2| high mobility group protein B3 isoform 1 [Bos taurus]
Length = 274
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKRPPS FF+F EFR K +P + ++ V K GE W +L+D+EK P+ KAA
Sbjct: 163 DPNAPKRPPSGFFLFCSEFRPKIKSANPGI-SIGDVAKKLGEMWNNLSDSEKQPYINKAA 221
Query: 112 KRKLDYEKLMTAYNKK 127
K K YEK + Y K
Sbjct: 222 KLKEKYEKDVADYKSK 237
>gi|281338637|gb|EFB14221.1| hypothetical protein PANDA_014002 [Ailuropoda melanoleuca]
Length = 168
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKRPPS FF+F EFR K +P + ++ V K GE W +L+D+EK P+ KAA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGI-SIGDVAKKLGEMWNNLSDSEKQPYNNKAA 147
Query: 112 KRKLDYEKLMTAYNKK 127
K K YEK + Y K
Sbjct: 148 KLKEKYEKDVADYKSK 163
>gi|225715078|gb|ACO13385.1| High mobility group protein B3 [Esox lucius]
Length = 204
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 44 KNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEK 103
K K AKKDPN PKRPPS FFVF E R K +HP+ + V K GE W +LTD+ K
Sbjct: 83 KRGKKAKKDPNAPKRPPSGFFVFCAEQRPKIKAQHPSF-GIGDVAKKLGEAWNNLTDSSK 141
Query: 104 APFEAKAAKRKLDYEKLMTAY 124
P+ AKA K K Y K + Y
Sbjct: 142 QPYLAKANKLKEKYRKDVADY 162
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
AK D KPK SA+ F++ R+ +K+++P + S K +WK+++ EK+ FE
Sbjct: 2 AKGDARKPKGKMSAYAYFVQTCREEHKKKNPEIPVNFSEFSKKCAGRWKTMSPKEKSKFE 61
Query: 108 AKAAKRKLDYEKLMTAYN 125
+A + K YE MT+Y
Sbjct: 62 DQANQDKARYESEMTSYG 79
>gi|395857208|ref|XP_003800997.1| PREDICTED: high mobility group protein B3-like [Otolemur garnettii]
Length = 225
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKRPPS FF+F EFR K +P + +V V K GE W +L+D+EK P+ KAA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGI-SVGDVAKKLGEMWNNLSDSEKQPYITKAA 147
Query: 112 KRKLDYEKLMTAYNKK 127
K K YEK + Y K
Sbjct: 148 KLKEKYEKDVADYKSK 163
>gi|291392907|ref|XP_002712835.1| PREDICTED: high-mobility group box 1 [Oryctolagus cuniculus]
Length = 208
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F E+ K EHP + ++ V K GE W + +K P E KA
Sbjct: 90 KDPNAPKRPPSAFFLFCSEYCPKIKGEHPGL-SIGDVAKKLGEMWNNTAAGDKQPCERKA 148
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K+ YEK + AY K
Sbjct: 149 AKLKVKYEKGIAAYQAK 165
Score = 38.5 bits (88), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DP KP+ S++ F++ + +K+ HP+ S K E+WK+++ +K FE
Sbjct: 2 GKGDPKKPRGKMSSYTFFVQTCPEKHKKRHPDASVNFSEFSKKCSERWKTMSAKKKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K YE+ M Y
Sbjct: 62 DMAKADKARYEREMKIY 78
>gi|81673590|gb|AAI09794.1| High-mobility group box 3 [Bos taurus]
gi|296471156|tpg|DAA13271.1| TPA: high mobility group protein B3 isoform 1 [Bos taurus]
Length = 236
Score = 71.6 bits (174), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKRPPS FF+F EFR K +P + ++ V K GE W +L+D+EK P+ KAA
Sbjct: 125 DPNAPKRPPSGFFLFCSEFRPKIKSANPGI-SIGDVAKKLGEMWNNLSDSEKQPYINKAA 183
Query: 112 KRKLDYEKLMTAYNKK 127
K K YEK + Y K
Sbjct: 184 KLKEKYEKDVADYKSK 199
>gi|223649496|gb|ACN11506.1| High mobility group protein B3 [Salmo salar]
Length = 207
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Query: 47 KSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPF 106
K KKDPN PKRPPS FF+F + R K +HP++ + V K GE+W +LTDA K P+
Sbjct: 84 KGRKKDPNAPKRPPSGFFIFCADHRPKIKAQHPSL-GIGDVAKKLGEQWNNLTDATKQPY 142
Query: 107 EAKAAKRKLDYEKLMTAY 124
KA K K Y+K + Y
Sbjct: 143 LIKANKLKDKYQKDVADY 160
Score = 36.6 bits (83), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
AK P KPK SA+ F++ R+ +K++ P + + K +WK+++ EK FE
Sbjct: 2 AKGTPGKPKGKMSAYAYFVQTCREEHKKKSPEIPVNFAEFSKKCSGRWKTMSGKEKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A + K+ Y+ M +
Sbjct: 62 DMAKQDKVRYDNEMMHF 78
>gi|440910877|gb|ELR60625.1| High mobility group protein B3 [Bos grunniens mutus]
Length = 236
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKRPPS FF+F EFR K +P + ++ V K GE W +L+D+EK P+ KAA
Sbjct: 125 DPNAPKRPPSGFFLFCSEFRPKIKSANPGI-SIGDVAKKLGEMWNNLSDSEKQPYINKAA 183
Query: 112 KRKLDYEKLMTAYNKK 127
K K YEK + Y K
Sbjct: 184 KLKEKYEKDVADYKSK 199
>gi|49258307|pdb|1J3D|A Chain A, Solution Structure Of The C-Terminal Domain Of The Hmgb2
Length = 78
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
KKDPN PKRPPSAFF+F E R K EHP + ++ K GE W + +K P+E K
Sbjct: 2 KKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGL-SIGDTAKKLGEMWSEQSAKDKQPYEQK 60
Query: 110 AAKRKLDYEKLMTAYNKK 127
AAK K YEK + AY K
Sbjct: 61 AAKLKEKYEKDIAAYRAK 78
>gi|547652|sp|P36194.2|HMGB1_CHICK RecName: Full=High mobility group protein B1; AltName: Full=High
mobility group protein 1; Short=HMG-1
gi|391636|dbj|BAA03260.1| HMG-1 [Gallus gallus]
Length = 201
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKRPPS FF+F EFR K +P + ++ V K GE W +L+D EK P+ KAA
Sbjct: 88 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGI-SIGDVAKKLGEMWNNLSDGEKQPYNNKAA 146
Query: 112 KRKLDYEKLMTAYNKK 127
K K YEK + Y K
Sbjct: 147 KLKEKYEKDVADYKSK 162
>gi|224098124|ref|XP_002198052.1| PREDICTED: high mobility group protein B3 isoform 1 [Taeniopygia
guttata]
gi|326924638|ref|XP_003208532.1| PREDICTED: high mobility group protein B3-like [Meleagris
gallopavo]
gi|449498655|ref|XP_004177286.1| PREDICTED: high mobility group protein B3 isoform 2 [Taeniopygia
guttata]
Length = 202
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKRPPS FF+F EFR K +P + ++ V K GE W +L+D EK P+ KAA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGI-SIGDVAKKLGEMWNNLSDGEKQPYNNKAA 147
Query: 112 KRKLDYEKLMTAYNKK 127
K K YEK + Y K
Sbjct: 148 KLKEKYEKDVADYKSK 163
Score = 35.0 bits (79), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 61 SAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKLDYEK 119
SA+ F++ R+ +K+++P V + K E+WK+++ EKA F+ A K+ Y++
Sbjct: 14 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSSKEKAKFDEMAKADKVRYDR 73
Query: 120 LMTAY 124
M Y
Sbjct: 74 EMKDY 78
>gi|449269345|gb|EMC80131.1| High mobility group protein B3 [Columba livia]
Length = 202
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKRPPS FF+F EFR K +P + ++ V K GE W +L+D EK P+ KAA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGI-SIGDVAKKLGEMWNNLSDGEKQPYNNKAA 147
Query: 112 KRKLDYEKLMTAYNKK 127
K K YEK + Y K
Sbjct: 148 KLKEKYEKDVADYKSK 163
>gi|432951224|ref|XP_004084757.1| PREDICTED: high mobility group protein B2-like [Oryzias latipes]
Length = 221
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKRPPSAFFVF + R K+++P + ++ + K GE W + + +KAP+EAKAA
Sbjct: 114 DPNAPKRPPSAFFVFCSDHRPKIKEDNPGI-SIGDIAKKLGELWATQSAKDKAPYEAKAA 172
Query: 112 KRKLDYEKLMTAYNKK 127
K K YEK + AY K
Sbjct: 173 KLKEKYEKDVAAYRAK 188
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 42 RTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTD 100
R + +++ KDPNKP+ SA+ F+ R+ +K++HP + K E+WK+++
Sbjct: 17 RLRQIEAMTKDPNKPRGKTSAYAYFVATCREEHKKKHPGTSVNFAEFSKKCSERWKTMSS 76
Query: 101 AEKAPFEAKAAKRKLDYEKLMTAY 124
EK F+ A K Y++ M Y
Sbjct: 77 KEKVKFDELAKTDKARYDREMKTY 100
>gi|397466921|ref|XP_003805186.1| PREDICTED: high mobility group protein B3 [Pan paniscus]
gi|410057106|ref|XP_001135676.3| PREDICTED: high mobility group protein B3 isoform 1 [Pan
troglodytes]
gi|426397737|ref|XP_004065063.1| PREDICTED: high mobility group protein B3 isoform 2 [Gorilla
gorilla gorilla]
gi|119619804|gb|EAW99398.1| high-mobility group box 3, isoform CRA_b [Homo sapiens]
Length = 220
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKRPPS FF+F EFR K +P + ++ V K GE W +L D+EK P+ KAA
Sbjct: 109 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGI-SIGDVAKKLGEMWNNLNDSEKQPYITKAA 167
Query: 112 KRKLDYEKLMTAYNKK 127
K K YEK + Y K
Sbjct: 168 KLKEKYEKDVADYKSK 183
>gi|410256410|gb|JAA16172.1| high mobility group box 3 [Pan troglodytes]
Length = 213
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKRPPS FF+F EFR K +P + ++ V K GE W +L D+EK P+ KAA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGI-SIGDVAKKLGEMWNNLNDSEKQPYITKAA 147
Query: 112 KRKLDYEKLMTAYNKK 127
K K YEK + Y K
Sbjct: 148 KLKEKYEKDVADYKSK 163
>gi|426258242|ref|XP_004022724.1| PREDICTED: high mobility group protein B3 [Ovis aries]
Length = 248
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKRPPS FF+F EFR K +P + ++ V K GE W +L+D+EK P+ KAA
Sbjct: 160 DPNAPKRPPSGFFLFCSEFRPKIKSANPGI-SIGDVAKKLGEMWNNLSDSEKQPYINKAA 218
Query: 112 KRKLDYEKLMTAYNKK 127
K K YEK + Y K
Sbjct: 219 KLKEKYEKDVADYKSK 234
>gi|291399740|ref|XP_002716281.1| PREDICTED: high-mobility group box 1 [Oryctolagus cuniculus]
Length = 243
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F E+R K EHP + ++ V K GE W + +K P+E KA
Sbjct: 90 KDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYERKA 148
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK AY K
Sbjct: 149 AKLKGKYEKDTAAYRAK 165
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K D KP+ S++ F++ R+ +K+ HP+ S K E+WK+++ EK FE
Sbjct: 2 GKGDRKKPRGKMSSYAFFVQTCREEHKKRHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K YE+ M Y
Sbjct: 62 DMAKADKARYEREMKTY 78
>gi|355705241|gb|EHH31166.1| hypothetical protein EGK_21042 [Macaca mulatta]
Length = 200
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKRPPS FF+F EFR K +P + ++ V K GE W +L D+EK P+ KAA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKLKSTNPGI-SIGDVAKKLGEMWNNLNDSEKQPYITKAA 147
Query: 112 KRKLDYEKLMTAYNKK 127
K K YEK + Y K
Sbjct: 148 KLKEKYEKDVADYKSK 163
>gi|395754558|ref|XP_002832281.2| PREDICTED: high mobility group protein B3 isoform 2 [Pongo abelii]
Length = 199
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKRPPS FF+F EFR K +P + ++ V K GE W +L D+EK P+ KAA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGI-SIGDVAKKLGEMWNNLNDSEKQPYITKAA 147
Query: 112 KRKLDYEKLMTAYNKK 127
K K YEK + Y K
Sbjct: 148 KLKEKYEKDVADYKSK 163
>gi|74628491|sp|Q7S045.1|NHP6_NEUCR RecName: Full=Non-histone chromosomal protein 6
gi|336464617|gb|EGO52857.1| Non-histone chromosomal protein 6 [Neurospora tetrasperma FGSC
2508]
gi|350296712|gb|EGZ77689.1| Non-histone chromosomal protein 6 [Neurospora tetrasperma FGSC
2509]
Length = 103
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEA 108
AKKDPN PKR SA+ F E R+ ++E+P V + VGK GE+WK+L+D ++AP+EA
Sbjct: 19 AKKDPNAPKRGLSAYMFFANEQRENVREENPGV-SFGQVGKILGERWKALSDKQRAPYEA 77
Query: 109 KAAKRKLDYEKLMTAYN 125
KAA K YE AYN
Sbjct: 78 KAAADKKRYEDEKQAYN 94
>gi|410219302|gb|JAA06870.1| high mobility group box 3 [Pan troglodytes]
Length = 199
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKRPPS FF+F EFR K +P + ++ V K GE W +L D+EK P+ KAA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGI-SIGDVAKKLGEMWNNLNDSEKQPYITKAA 147
Query: 112 KRKLDYEKLMTAYNKK 127
K K YEK + Y K
Sbjct: 148 KLKEKYEKDVADYKSK 163
>gi|296236643|ref|XP_002763412.1| PREDICTED: high mobility group protein B3-like [Callithrix jacchus]
Length = 203
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKRPPS FF+F EFR K +P + ++ V K GE W +L D+EK P+ KAA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGI-SIGDVAKKLGEMWNNLNDSEKQPYITKAA 147
Query: 112 KRKLDYEKLMTAYNKK 127
K K YEK + Y K
Sbjct: 148 KLKEKYEKDVADYKSK 163
>gi|167773205|gb|ABZ92037.1| high-mobility group box 3 [synthetic construct]
Length = 198
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKRPPS FF+F EFR K +P + ++ V K GE W +L D+EK P+ KAA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGI-SIGDVAKKLGEMWNNLNDSEKQPYITKAA 147
Query: 112 KRKLDYEKLMTAYNKK 127
K K YEK + Y K
Sbjct: 148 KLKEKYEKDVADYKSK 163
>gi|109132602|ref|XP_001091672.1| PREDICTED: high mobility group protein B3-like isoform 3 [Macaca
mulatta]
gi|109132606|ref|XP_001091441.1| PREDICTED: high mobility group protein B3-like isoform 1 [Macaca
mulatta]
gi|402911729|ref|XP_003918461.1| PREDICTED: high mobility group protein B3 isoform 1 [Papio anubis]
gi|402911731|ref|XP_003918462.1| PREDICTED: high mobility group protein B3 isoform 2 [Papio anubis]
Length = 201
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKRPPS FF+F EFR K +P + ++ V K GE W +L D+EK P+ KAA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGI-SIGDVAKKLGEMWNNLNDSEKQPYITKAA 147
Query: 112 KRKLDYEKLMTAYNKK 127
K K YEK + Y K
Sbjct: 148 KLKEKYEKDVADYKSK 163
>gi|71143137|ref|NP_005333.2| high mobility group protein B3 [Homo sapiens]
gi|426397735|ref|XP_004065062.1| PREDICTED: high mobility group protein B3 isoform 1 [Gorilla
gorilla gorilla]
gi|426397739|ref|XP_004065064.1| PREDICTED: high mobility group protein B3 isoform 3 [Gorilla
gorilla gorilla]
gi|85701353|sp|O15347.4|HMGB3_HUMAN RecName: Full=High mobility group protein B3; AltName: Full=High
mobility group protein 2a; Short=HMG-2a; AltName:
Full=High mobility group protein 4; Short=HMG-4
gi|47124341|gb|AAH70482.1| HMGB3 protein [Homo sapiens]
gi|117645316|emb|CAL38124.1| hypothetical protein [synthetic construct]
gi|117646384|emb|CAL38659.1| hypothetical protein [synthetic construct]
gi|119619803|gb|EAW99397.1| high-mobility group box 3, isoform CRA_a [Homo sapiens]
gi|410351655|gb|JAA42431.1| high mobility group box 3 [Pan troglodytes]
gi|410351657|gb|JAA42432.1| high mobility group box 3 [Pan troglodytes]
Length = 200
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKRPPS FF+F EFR K +P + ++ V K GE W +L D+EK P+ KAA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGI-SIGDVAKKLGEMWNNLNDSEKQPYITKAA 147
Query: 112 KRKLDYEKLMTAYNKK 127
K K YEK + Y K
Sbjct: 148 KLKEKYEKDVADYKSK 163
>gi|52345682|ref|NP_001004888.1| high mobility group box 3 [Xenopus (Silurana) tropicalis]
gi|49522962|gb|AAH75290.1| MGC88931 protein [Xenopus (Silurana) tropicalis]
gi|89267024|emb|CAJ81774.1| high-mobility group box 3 [Xenopus (Silurana) tropicalis]
Length = 202
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKRPPS FF+F EFR K +P + ++ V K GE W +L D EK P+ KAA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGI-SIGDVAKKLGEMWNNLNDGEKQPYNNKAA 147
Query: 112 KRKLDYEKLMTAYNKK 127
K K YEK + Y K
Sbjct: 148 KLKEKYEKDVADYKSK 163
>gi|253756810|gb|ACT35162.1| HmgB3y, partial [Monodelphis domestica]
Length = 193
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKRPPS FF+F EFR K +P + ++ V K GE W +L+D EK P+ KAA
Sbjct: 86 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGI-SIGDVAKKLGEMWNNLSDNEKQPYNNKAA 144
Query: 112 KRKLDYEKLMTAYNKK 127
K K YEK + Y K
Sbjct: 145 KLKEKYEKDVADYKSK 160
Score = 42.0 bits (97), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFEAKA 110
DP KPK SA+ F++ R+ +K+++P V + K E+WK+++ EK+ F+ A
Sbjct: 2 DPKKPKGKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKNMSGKEKSKFDEMA 61
Query: 111 AKRKLDYEKLMTAY 124
KL Y++ M Y
Sbjct: 62 KADKLRYDREMKDY 75
>gi|2285963|emb|CAA71143.1| high mobility group protein 2a [Homo sapiens]
Length = 200
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKRPPS FF+F EFR K +P + ++ V K GE W +L D+EK P+ KAA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGI-SIGDVAKKLGEMWNNLNDSEKQPYITKAA 147
Query: 112 KRKLDYEKLMTAYNKK 127
K K YEK + Y K
Sbjct: 148 KLKEKYEKDVADYKSK 163
>gi|56788496|gb|AAW29969.1| unknown [Sus scrofa]
gi|56792880|gb|AAW30632.1| unknown [Sus scrofa]
Length = 193
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F E+R K EHP + ++ V K GE W + +K P+E A
Sbjct: 90 KDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKXA 148
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + AY K
Sbjct: 149 AKLKEKYEKDIAAYRAK 165
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DP KP+ S++ F++ R+ +K++HP+ S K E+WK+++ EK FE
Sbjct: 2 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K YE+ M Y
Sbjct: 62 DMAKADKARYEREMKTY 78
>gi|403305854|ref|XP_003943467.1| PREDICTED: high mobility group protein B3 [Saimiri boliviensis
boliviensis]
Length = 202
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKRPPS FF+F EFR K +P + ++ V K GE W +L D+EK P+ KAA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGI-SIGDVAKKLGEMWNNLNDSEKQPYITKAA 147
Query: 112 KRKLDYEKLMTAYNKK 127
K K YEK + Y K
Sbjct: 148 KLKEKYEKDVADYKSK 163
>gi|148694630|gb|EDL26577.1| mCG10155, isoform CRA_d [Mus musculus]
Length = 220
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKRPPS FF+F EFR K +P + ++ V K GE W +L+D EK P+ KAA
Sbjct: 109 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGI-SIGDVAKKLGEMWNNLSDNEKQPYVTKAA 167
Query: 112 KRKLDYEKLMTAYNKK 127
K K YEK + Y K
Sbjct: 168 KLKEKYEKDVADYKSK 183
>gi|350588033|ref|XP_003482539.1| PREDICTED: high mobility group protein B3-like [Sus scrofa]
gi|350588037|ref|XP_003482541.1| PREDICTED: high mobility group protein B3-like [Sus scrofa]
Length = 196
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKRPPS FF+F EFR K +P + ++ V K GE W +L+D+EK P+ KAA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGI-SIGDVAKKLGEMWNNLSDSEKQPYINKAA 147
Query: 112 KRKLDYEKLMTAYNKK 127
K K YEK + Y K
Sbjct: 148 KLKEKYEKDVADYKSK 163
>gi|148694627|gb|EDL26574.1| mCG10155, isoform CRA_b [Mus musculus]
Length = 206
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKRPPS FF+F EFR K +P + ++ V K GE W +L+D EK P+ KAA
Sbjct: 95 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGI-SIGDVAKKLGEMWNNLSDNEKQPYVTKAA 153
Query: 112 KRKLDYEKLMTAYNKK 127
K K YEK + Y K
Sbjct: 154 KLKEKYEKDVADYKSK 169
>gi|311277128|ref|XP_003135516.1| PREDICTED: high mobility group protein B3-like [Sus scrofa]
Length = 202
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKRPPS FF+F EFR K +P + ++ V K GE W +L+D+EK P+ KAA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGI-SIGDVAKKLGEMWNNLSDSEKQPYINKAA 147
Query: 112 KRKLDYEKLMTAYNKK 127
K K YEK + Y K
Sbjct: 148 KLKEKYEKDVADYKSK 163
>gi|164422576|ref|XP_957906.2| hypothetical protein NCU09995 [Neurospora crassa OR74A]
gi|157069727|gb|EAA28670.2| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 95
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEA 108
AKKDPN PKR SA+ F E R+ ++E+P V + VGK GE+WK+L+D ++AP+EA
Sbjct: 19 AKKDPNAPKRGLSAYMFFANEQRENVREENPGV-SFGQVGKILGERWKALSDKQRAPYEA 77
Query: 109 KAAKRKLDYEKLMTAYN 125
KAA K YE AYN
Sbjct: 78 KAAADKKRYEDEKQAYN 94
>gi|205539816|sp|P0C6E5.1|HG3BL_HUMAN RecName: Full=Putative high mobility group protein B3-like protein
Length = 187
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
KKDPN PKRPPS FF+F EF K +P + + V K GE WK+L D+EK P+ +
Sbjct: 86 KKDPNAPKRPPSGFFLFCSEFCPKSKSTNPGI-PIGDVAKKLGEMWKNLNDSEKQPYITQ 144
Query: 110 AAKRKLDYEKLMTAYNKK 127
AAK K YEK + Y K
Sbjct: 145 AAKLKEKYEKDVAVYKSK 162
>gi|344299188|ref|XP_003421269.1| PREDICTED: high mobility group protein B3-like [Loxodonta africana]
Length = 200
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKRPPS FF+F EFR K +P + ++ V K GE W +L+D EK P+ KAA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGI-SIGDVAKKLGEMWNNLSDNEKQPYNNKAA 147
Query: 112 KRKLDYEKLMTAYNKK 127
K K YEK + Y K
Sbjct: 148 KLKEKYEKDVADYKSK 163
>gi|164450473|ref|NP_001106728.1| high mobility group protein B3 isoform 2 [Bos taurus]
gi|146324910|sp|Q32L31.2|HMGB3_BOVIN RecName: Full=High mobility group protein B3
gi|296471157|tpg|DAA13272.1| TPA: high mobility group protein B3 isoform 2 [Bos taurus]
gi|399227521|gb|AFP36466.1| HMGB3 transcript variant 1/2 [Bos taurus]
gi|399227522|gb|AFP36467.1| HMGB3 transcript variant 3 [Bos taurus]
Length = 200
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKRPPS FF+F EFR K +P + ++ V K GE W +L+D+EK P+ KAA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSANPGI-SIGDVAKKLGEMWNNLSDSEKQPYINKAA 147
Query: 112 KRKLDYEKLMTAYNKK 127
K K YEK + Y K
Sbjct: 148 KLKEKYEKDVADYKSK 163
>gi|121705796|ref|XP_001271161.1| nucleosome binding protein (Nhp6a), putative [Aspergillus clavatus
NRRL 1]
gi|119399307|gb|EAW09735.1| nucleosome binding protein (Nhp6a), putative [Aspergillus clavatus
NRRL 1]
Length = 104
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Query: 38 SSNKRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKS 97
S+ +TK V+ KKDPN PKR SA+ F + R ++E+P + + VGK GE+WK+
Sbjct: 7 STRTKTKRVERKKKDPNAPKRGLSAYMFFANDNRDKVREENPGI-SFGQVGKMLGERWKA 65
Query: 98 LTDAEKAPFEAKAAKRKLDYEKLMTAYNKKQ 128
L+D+E+ P+E KAA K YE +YN Q
Sbjct: 66 LSDSERRPYEEKAATDKKRYEDEKASYNAAQ 96
>gi|429860623|gb|ELA35353.1| nucleosome binding protein [Colletotrichum gloeosporioides Nara
gc5]
Length = 103
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Query: 47 KSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPF 106
K KKDPN PKR SA+ F E R+ ++E+P + + VGK GE+WK+L D ++AP+
Sbjct: 17 KRGKKDPNAPKRGLSAYMFFANEQRENVREENPGI-SFGQVGKILGERWKALNDKQRAPY 75
Query: 107 EAKAAKRKLDYEKLMTAYNKKQ 128
EAKAA K YE AYN Q
Sbjct: 76 EAKAAADKKRYEDEKQAYNADQ 97
>gi|229367676|gb|ACQ58818.1| High mobility group protein B1 [Anoplopoma fimbria]
Length = 197
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F +FR K EHP + + K GE W S + K P+E KA
Sbjct: 89 KDPNAPKRPPSAFFLFCGDFRPKVKSEHPGL-TIGDTAKKLGEMWNSSSAENKQPYERKA 147
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K Y+K + AY K
Sbjct: 148 AKLKEKYDKDIVAYRTK 164
Score = 42.4 bits (98), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFEAK 109
KDP KPK S++ F++ R+ +K++HP + K E+WK+++ K FE
Sbjct: 3 KDPRKPKGKMSSYAYFVQTCREEHKKKHPEASVNFAEFSKKCSERWKTMSQKGKGKFEDM 62
Query: 110 AAKRKLDYEKLMTAYN 125
A K+ YE+ M Y+
Sbjct: 63 AKLDKVRYERDMKNYD 78
>gi|367020358|ref|XP_003659464.1| hypothetical protein MYCTH_2296547 [Myceliophthora thermophila ATCC
42464]
gi|347006731|gb|AEO54219.1| hypothetical protein MYCTH_2296547 [Myceliophthora thermophila ATCC
42464]
Length = 101
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Query: 47 KSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPF 106
K +KKDPN PKR SA+ F E R+ ++E+P V + VGK GE+WK+L+D ++AP+
Sbjct: 15 KRSKKDPNAPKRGLSAYMFFANEQRENVREENPGV-SFGQVGKILGERWKALSDKQRAPY 73
Query: 107 EAKAAKRKLDYEKLMTAYN 125
EAKAA K YE AYN
Sbjct: 74 EAKAAADKKRYEDEKQAYN 92
>gi|359062996|ref|XP_003585778.1| PREDICTED: high mobility group protein B3-like, partial [Bos
taurus]
Length = 186
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKRPPS FF+F EFR K +P + ++ V K GE W +L+D+EK P+ KAA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSANPGI-SIGDVAKKLGEMWNNLSDSEKQPYINKAA 147
Query: 112 KRKLDYEKLMTAYNKK 127
K K YEK + Y K
Sbjct: 148 KLKEKYEKDVADYKSK 163
>gi|229365968|gb|ACQ57964.1| High mobility group protein B1 [Anoplopoma fimbria]
Length = 197
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F +FR K EHP + + K GE W S + K P+E KA
Sbjct: 89 KDPNAPKRPPSAFFLFCGDFRPKVKSEHPGL-TIGDTAKKLGEMWNSSSAENKQPYERKA 147
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K Y+K + AY K
Sbjct: 148 AKLKEKYDKDIVAYRTK 164
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFEAK 109
KDP KPK S++ F++ R+ +K++HP + K E+WK+++ EK FE
Sbjct: 3 KDPRKPKGKMSSYAYFVQTCREEHKKKHPEASVNFAEFSKKCSERWKTMSQKEKGKFEDM 62
Query: 110 AAKRKLDYEKLMTAYN 125
A K+ YE+ M Y+
Sbjct: 63 AKLDKVRYERDMKNYD 78
>gi|229367846|gb|ACQ58903.1| High mobility group protein B2 [Anoplopoma fimbria]
Length = 213
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKRPPSAFFVF + R K+E+P + ++ + K GE W + T +K P+EA+A
Sbjct: 92 DPNAPKRPPSAFFVFCSDHRPRIKEENPGI-SIGDIAKKLGEFWSTQTSKDKVPYEARAG 150
Query: 112 KRKLDYEKLMTAYNKKQ 128
K K YEK + AY K
Sbjct: 151 KLKEKYEKDVAAYKAKS 167
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVK-AVSAVGKAGGEKWKSLTDAEKAPFEAK 109
KDPNKP+ S++ F+ R+ +K++HP V + K E+WK+++ EK FE
Sbjct: 3 KDPNKPRGKTSSYAFFVATCREEHKKKHPGVSVGFAEFSKKCSERWKTMSAKEKVKFEDL 62
Query: 110 AAKRKLDYEKLMTAY 124
A K+ YE+ M Y
Sbjct: 63 AKNDKVRYEREMKTY 77
>gi|334323271|ref|XP_003340370.1| PREDICTED: high mobility group protein B1-like [Monodelphis
domestica]
Length = 216
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F E+R K EHP + ++ V K GE W + +K P+E KA
Sbjct: 90 KDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKA 148
Query: 111 AKRKLDYEKLMTAYNKK 127
A K YEK + AY K
Sbjct: 149 AILKEKYEKDIAAYRTK 165
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DP KP+ S++ F++ R+ +K++HP+ S K E+WK+++ EK F+
Sbjct: 2 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFQ 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K+ YE+ M Y
Sbjct: 62 DMAKADKVHYEREMKTY 78
>gi|148682307|gb|EDL14254.1| mCG114640 [Mus musculus]
Length = 200
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKRPPS FF+F EFR K +P + ++ V K GE W +L+D EK P+ KAA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGI-SIGDVAKKLGEMWNNLSDNEKQPYVTKAA 147
Query: 112 KRKLDYEKLMTAYNKK 127
K K YEK + Y K
Sbjct: 148 KLKEKYEKDVADYKSK 163
>gi|6680231|ref|NP_032279.1| high mobility group protein B3 [Mus musculus]
gi|20138160|sp|O54879.3|HMGB3_MOUSE RecName: Full=High mobility group protein B3; AltName: Full=High
mobility group protein 2a; Short=HMG-2a; AltName:
Full=High mobility group protein 4; Short=HMG-4
gi|2738989|gb|AAC16925.1| high mobility group protein homolog HMG4 [Mus musculus]
gi|15030059|gb|AAH11276.1| Hmgb3 protein [Mus musculus]
gi|26327985|dbj|BAC27733.1| unnamed protein product [Mus musculus]
gi|54035419|gb|AAH83352.1| High mobility group box 3 [Mus musculus]
gi|74146994|dbj|BAE27437.1| unnamed protein product [Mus musculus]
gi|74186760|dbj|BAE34835.1| unnamed protein product [Mus musculus]
gi|74192972|dbj|BAE34988.1| unnamed protein product [Mus musculus]
gi|74194280|dbj|BAE24671.1| unnamed protein product [Mus musculus]
gi|148694626|gb|EDL26573.1| mCG10155, isoform CRA_a [Mus musculus]
gi|148694628|gb|EDL26575.1| mCG10155, isoform CRA_a [Mus musculus]
gi|187957408|gb|AAI58038.1| High mobility group box 3 [Mus musculus]
Length = 200
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKRPPS FF+F EFR K +P + ++ V K GE W +L+D EK P+ KAA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGI-SIGDVAKKLGEMWNNLSDNEKQPYVTKAA 147
Query: 112 KRKLDYEKLMTAYNKK 127
K K YEK + Y K
Sbjct: 148 KLKEKYEKDVADYKSK 163
>gi|336272321|ref|XP_003350917.1| hypothetical protein SMAC_04223 [Sordaria macrospora k-hell]
gi|380090684|emb|CCC04854.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 103
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 50/77 (64%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEA 108
AKKDPN PKR SA+ F E R+ ++E+P V VGK GE+WK+L+D ++AP+EA
Sbjct: 19 AKKDPNAPKRGLSAYMFFANEQRENVREENPGV-TFGQVGKILGERWKALSDKQRAPYEA 77
Query: 109 KAAKRKLDYEKLMTAYN 125
KAA K YE AYN
Sbjct: 78 KAAADKKRYEDEKQAYN 94
>gi|254826706|ref|NP_001157151.1| high mobility group protein B3 [Monodelphis domestica]
gi|253756818|gb|ACT35166.1| HmgB3x [Monodelphis domestica]
Length = 201
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKRPPS FF+F EFR K +P + ++ V K GE W +L+D EK P+ KAA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGI-SIGDVAKKLGEMWNNLSDNEKQPYNNKAA 147
Query: 112 KRKLDYEKLMTAYNKK 127
K K YEK + Y K
Sbjct: 148 KLKEKYEKDVADYKSK 163
>gi|170784871|ref|NP_001116308.1| wu:fk52f12 [Danio rerio]
Length = 213
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
KKDPN PKRPPS FF+F E R K ++P++ + V K GE W LTDA K PF K
Sbjct: 86 KKDPNAPKRPPSGFFLFCSEHRPQIKAQYPSL-GIGDVAKKLGEMWNGLTDANKQPFLMK 144
Query: 110 AAKRKLDYEKLMTAYNKK 127
A K K Y+K + Y K
Sbjct: 145 ANKLKDKYQKDVADYKTK 162
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVK-AVSAVGKAGGEKWKSLTDAEKAPFE 107
AK DP KPK SA+ F++ R+ +K++ P + + S K +WK++TD EK+ FE
Sbjct: 2 AKGDPRKPKGKMSAYAYFVQTCREEHKKKSPEIPVSFSEFSKRCSGRWKAMTDKEKSRFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A + K+ Y++ M Y
Sbjct: 62 DMAKQDKVRYDQEMMHY 78
>gi|358379174|gb|EHK16855.1| hypothetical protein TRIVIDRAFT_217092 [Trichoderma virens Gv29-8]
Length = 102
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Query: 47 KSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPF 106
K KKDPN PKR SA+ F E R+ ++E+P + + VGK GE+WK+L D ++AP+
Sbjct: 17 KRTKKDPNAPKRGLSAYMFFANEQRENVREENPGI-SFGQVGKLLGERWKALNDKQRAPY 75
Query: 107 EAKAAKRKLDYEKLMTAYNKKQ 128
EAKAA K YE AYN Q
Sbjct: 76 EAKAAADKKRYEDEKQAYNADQ 97
>gi|297812105|ref|XP_002873936.1| hypothetical protein ARALYDRAFT_488801 [Arabidopsis lyrata subsp.
lyrata]
gi|297319773|gb|EFH50195.1| hypothetical protein ARALYDRAFT_488801 [Arabidopsis lyrata subsp.
lyrata]
Length = 224
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 41 KRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTD 100
K+T + K + NKPKRP +AFF+F+ +FRK +K EH A A K GGEKW SLT+
Sbjct: 97 KKTNDEKKSSSTSNKPKRPLTAFFIFMNDFRKTFKTEHNGSFAKDA-AKIGGEKWMSLTE 155
Query: 101 AEKAPFEAKAAKRKLDYEK 119
EK + KAA+ K +Y K
Sbjct: 156 DEKKVYLDKAAELKAEYNK 174
>gi|79324303|ref|NP_001031480.1| high mobility group (HMG1/2) domain-containing protein [Arabidopsis
thaliana]
gi|330253882|gb|AEC08976.1| high mobility group (HMG1/2) domain-containing protein [Arabidopsis
thaliana]
Length = 152
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 52/73 (71%), Gaps = 1/73 (1%)
Query: 56 PKRPPSAFFVFLEEFRKVYKQEHPNVKAV-SAVGKAGGEKWKSLTDAEKAPFEAKAAKRK 114
PK+P +AFF FL++FRK Y++E+P+VK++ +GK GEKWK++T EK + A +++
Sbjct: 63 PKKPATAFFFFLDDFRKQYQEENPDVKSMREVIGKTCGEKWKTMTYEEKVKYYDIATEKR 122
Query: 115 LDYEKLMTAYNKK 127
++ + MT Y K+
Sbjct: 123 EEFHRAMTEYTKR 135
>gi|148229870|ref|NP_001080585.1| high mobility group box 3 [Xenopus laevis]
gi|27882654|gb|AAH44009.1| Hmgb3-prov protein [Xenopus laevis]
Length = 202
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKRPPS FF+F EFR K +P + + V K GE W +L+D+EK P+ K A
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGI-TIGDVAKKLGEMWNNLSDSEKQPYNNKGA 147
Query: 112 KRKLDYEKLMTAYNKK 127
K K YEK + Y K
Sbjct: 148 KLKEKYEKDVADYKSK 163
>gi|348538096|ref|XP_003456528.1| PREDICTED: high mobility group protein B2-like [Oreochromis
niloticus]
Length = 196
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKRPPSAFFVF + R K+++P + ++ + K GE W + + +KAP+EAKAA
Sbjct: 91 DPNAPKRPPSAFFVFCSDHRPKIKEDNPGI-SIGDIAKKLGEMWATQSAKDKAPYEAKAA 149
Query: 112 KRKLDYEKLMTAYNKK 127
+ K YEK + AY K
Sbjct: 150 RLKEKYEKDVAAYRAK 165
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFEAK 109
KDPNKP+ S++ F+ R+ +K++HP + K E+WK+++ EK FE
Sbjct: 3 KDPNKPRGKTSSYAFFVATCREEHKKKHPGTSVNFAEFSKKCSERWKTMSPKEKGKFEEM 62
Query: 110 AAKRKLDYEKLMTAY 124
A K+ Y++ M Y
Sbjct: 63 AKNDKVRYDREMKTY 77
>gi|291415754|ref|XP_002724114.1| PREDICTED: high-mobility group box 2-like [Oryctolagus cuniculus]
Length = 234
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKRPPSAFF+F E R K EHP + ++ K GE W + +K P+E KAA
Sbjct: 115 DPNAPKRPPSAFFLFCSEHRPEIKSEHPGL-SIGDTAKKLGEMWSEQSAKDKQPYEQKAA 173
Query: 112 KRKLDYEKLMTAYNKK 127
K K YEK + AY K
Sbjct: 174 KLKEKYEKDIAAYCDK 189
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 44 KNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAE 102
++V K DPNKP+ S++ F++ R+ +K++HP+ + K E+WK+++ E
Sbjct: 21 RSVVMGKGDPNKPRDKMSSYAFFVQMCREEHKKKHPDSSINFAEFSKKCSERWKTMSAKE 80
Query: 103 KAPFEAKAAKRKLDYEKLMTAY 124
K+ FE A K Y++ M Y
Sbjct: 81 KSKFENMAKSDKARYDREMKNY 102
>gi|119491564|ref|XP_001263303.1| nucleosome binding protein (Nhp6a), putative [Neosartorya fischeri
NRRL 181]
gi|119411463|gb|EAW21406.1| nucleosome binding protein (Nhp6a), putative [Neosartorya fischeri
NRRL 181]
Length = 104
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
Query: 38 SSNKRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKS 97
S+ +TK V+ KKDPN PKR SA+ F E R ++E+P + + VGK GE+WK+
Sbjct: 7 STRTKTKRVERKKKDPNAPKRGLSAYMFFANENRDKVREENPGI-SFGQVGKMLGERWKA 65
Query: 98 LTDAEKAPFEAKAAKRKLDYEKLMTAYNKKQ 128
L+D ++ P+E KAA K YE +YN Q
Sbjct: 66 LSDTDRRPYEEKAAADKKRYEDEKASYNAAQ 96
>gi|355762621|gb|EHH62030.1| hypothetical protein EGM_20207 [Macaca fascicularis]
Length = 201
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKRPPS FF+F EFR K +P + ++ V K GE W +L D+EK P+ KAA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGI-SIGDVPKKLGEMWNNLNDSEKQPYITKAA 147
Query: 112 KRKLDYEKLMTAYNKK 127
K K YEK + Y K
Sbjct: 148 KLKEKYEKDVADYKSK 163
>gi|367043490|ref|XP_003652125.1| hypothetical protein THITE_126111 [Thielavia terrestris NRRL 8126]
gi|346999387|gb|AEO65789.1| hypothetical protein THITE_126111 [Thielavia terrestris NRRL 8126]
Length = 103
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 50/77 (64%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEA 108
KKDPN PKR SA+ F E R+ ++E+P V + VGK GE+WK+L+D ++AP+EA
Sbjct: 17 GKKDPNAPKRGLSAYMFFANEQRENVREENPGV-SFGQVGKILGERWKALSDKQRAPYEA 75
Query: 109 KAAKRKLDYEKLMTAYN 125
KAA K YE AYN
Sbjct: 76 KAAADKKRYEDEKQAYN 92
>gi|116206850|ref|XP_001229234.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88183315|gb|EAQ90783.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 96
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 57/92 (61%), Gaps = 1/92 (1%)
Query: 34 KASRSSNKRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGE 93
KA++S + + + KKDPN PKR SA+ F E R ++E+P V + VGK GE
Sbjct: 3 KAAKSRSGKAEKKTRQKKDPNAPKRGLSAYMFFANEQRDNVREENPGV-SFGQVGKILGE 61
Query: 94 KWKSLTDAEKAPFEAKAAKRKLDYEKLMTAYN 125
+WK+L+D ++AP+EAKAA K YE AYN
Sbjct: 62 RWKALSDKQRAPYEAKAAADKKRYEDEKQAYN 93
>gi|46105649|ref|XP_380561.1| hypothetical protein FG00385.1 [Gibberella zeae PH-1]
gi|110287687|sp|Q4IQX3.1|NHP6_GIBZE RecName: Full=Non-histone chromosomal protein 6
gi|408400690|gb|EKJ79767.1| hypothetical protein FPSE_00047 [Fusarium pseudograminearum CS3096]
Length = 101
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Query: 46 VKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAP 105
K AKKDPN PKR SA+ F E R+ ++E+P + + VGK GE+WK+L + ++AP
Sbjct: 14 TKRAKKDPNAPKRGLSAYMFFANEQRENVREENPGI-SFGQVGKLLGERWKALNEKQRAP 72
Query: 106 FEAKAAKRKLDYEKLMTAYNKKQ 128
+EAKAA K YE AYN Q
Sbjct: 73 YEAKAAADKKRYEDEKQAYNADQ 95
>gi|148238271|ref|NP_001081794.1| high mobility group protein-1 [Xenopus laevis]
gi|709959|gb|AAC59859.1| high mobility group protein-1 [Xenopus laevis]
Length = 210
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F +FR K EHP + + K GE W + +K P+E +A
Sbjct: 89 KDPNAPKRPPSAFFLFCSDFRPKIKGEHPGS-TIGDIAKKLGEMWNNTATDDKLPYERRA 147
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + AY K
Sbjct: 148 AKLKEKYEKDVAAYRAK 164
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DP KP+ S++ F++ R+ +K++HP+ + K E+WK+++ EK FE
Sbjct: 2 GKGDPKKPRGKMSSYAYFVQTCREEHKKKHPDASVNFAEFSKKCSERWKTMS-KEKTKFE 60
Query: 108 AKAAKRKLDYEKLMTAY 124
A K+ YE+ M +Y
Sbjct: 61 DMAKADKVRYEREMKSY 77
>gi|296200444|ref|XP_002747606.1| PREDICTED: high mobility group protein B1-like isoform 2
[Callithrix jacchus]
Length = 210
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDP+ PKRPPSAFF+F E+R K EHP + ++ V K GE W + +K P+E KA
Sbjct: 90 KDPSAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKA 148
Query: 111 AKRKLDYEKLMTAYNKK 127
+K K YEK + AY K
Sbjct: 149 SKLKEKYEKDIAAYQAK 165
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DP K + S++ F++ R+ +K++HP+ S K E+WK+++ EK FE
Sbjct: 2 GKGDPKKLRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K+ YE+ M Y
Sbjct: 62 DMAKADKVRYEREMKTY 78
>gi|49115548|gb|AAH73449.1| HMG-1 protein [Xenopus laevis]
Length = 210
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F +FR K EHP + + K GE W + +K P+E +A
Sbjct: 89 KDPNAPKRPPSAFFLFCSDFRPKIKGEHPGS-TIGDIAKKLGEMWNNTATDDKLPYERRA 147
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + AY K
Sbjct: 148 AKLKEKYEKDVAAYRAK 164
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DP KP+ S++ F++ R+ +K++HP+ + K E+WK+++ EK FE
Sbjct: 2 GKGDPKKPRGKMSSYAYFVQTCREEHKKKHPDASVNFAEFSKKCSERWKTMS-KEKTKFE 60
Query: 108 AKAAKRKLDYEKLMTAY 124
A K+ YE+ M +Y
Sbjct: 61 DMAKADKVRYEREMKSY 77
>gi|351715334|gb|EHB18253.1| High mobility group protein B3, partial [Heterocephalus glaber]
Length = 151
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKRPP FF+F EFR K +P + ++ V K GE W +L+D+EK P+ KAA
Sbjct: 40 DPNAPKRPPPGFFLFFSEFRPKIKSTNPGI-SIGDVAKKLGEMWNNLSDSEKQPYITKAA 98
Query: 112 KRKLDYEKLMTAYNKK 127
K K YEK + Y K
Sbjct: 99 KLKEKYEKDVADYKSK 114
>gi|400599237|gb|EJP66941.1| HMG box protein [Beauveria bassiana ARSEF 2860]
Length = 96
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
Query: 47 KSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPF 106
K AKKDPN PKR SA+ F E R+ ++E+P V + VGK GE+WK+L+D ++ P+
Sbjct: 17 KRAKKDPNAPKRGLSAYMFFANEQRENVREENPGV-SFGQVGKILGERWKALSDKQRTPY 75
Query: 107 EAKAAKRKLDYEKLMTAYN 125
EAKAA K YE AYN
Sbjct: 76 EAKAAADKKRYEDEKAAYN 94
>gi|449500530|ref|XP_002187513.2| PREDICTED: high mobility group protein B2 [Taeniopygia guttata]
Length = 145
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKRPPSAFF+F E R K EHP + ++ K GE W + +K P+E KAA
Sbjct: 40 DPNAPKRPPSAFFLFCSEHRPKIKNEHPGL-SIGDTAKKLGEMWSEQSAKDKQPYEQKAA 98
Query: 112 KRKLDYEKLMTAYNKK 127
K K YEK + AY K
Sbjct: 99 KLKEKYEKDIAAYRAK 114
>gi|51858856|gb|AAH81424.1| Hmgb3b protein [Danio rerio]
Length = 166
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
KKDPN P+RPPS FF+F E R + K ++P++ + V K G W +L+D+EK PF +
Sbjct: 88 KKDPNAPRRPPSGFFLFCAEQRPIIKAQNPSL-GIGDVAKKLGGMWNNLSDSEKQPFLSN 146
Query: 110 AAKRKLDYEKLMTAYNKK 127
A K K Y+K M Y KK
Sbjct: 147 ADKLKDKYQKDMAFYKKK 164
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
AK DP KPK SA+ F++ R+ + +++P V S K E+WK+++ EK FE
Sbjct: 2 AKGDPGKPKGKMSAYAYFVKTCREEHNKKNPGVTVNFSEFSKKCSERWKTMSPKEKTKFE 61
Query: 108 AKAAKRKLDYEKLMTAYN 125
A + K Y++ M YN
Sbjct: 62 DLAKQDKARYDQEMMHYN 79
>gi|148673204|gb|EDL05151.1| mCG5336 [Mus musculus]
Length = 216
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F E+R K EHP + ++ V K GE W + +K P+ KA
Sbjct: 90 KDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAVYDKQPYGKKA 148
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + AY K
Sbjct: 149 AKLKEKYEKDIAAYRAK 165
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DP KP+ S++ F++ R+ +K++HP+ S K E+WK+++ EK FE
Sbjct: 2 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K YE+ M Y
Sbjct: 62 DMAKADKARYEREMKTY 78
>gi|302926833|ref|XP_003054372.1| HMG box-containing protein [Nectria haematococca mpVI 77-13-4]
gi|256735313|gb|EEU48659.1| HMG box-containing protein [Nectria haematococca mpVI 77-13-4]
Length = 101
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 56/92 (60%), Gaps = 2/92 (2%)
Query: 38 SSNKRTKNVK-SAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWK 96
+ KR K VK KKDPN PKR SA+ F E R+ ++E+P + + VGK GE+WK
Sbjct: 5 DAGKRGKAVKKRGKKDPNAPKRGLSAYMFFANEQRENVREENPGI-SFGQVGKLLGERWK 63
Query: 97 SLTDAEKAPFEAKAAKRKLDYEKLMTAYNKKQ 128
+L + ++AP+EAKAA K YE AYN Q
Sbjct: 64 ALNEKQRAPYEAKAAADKKRYEDEKQAYNADQ 95
>gi|358410870|ref|XP_003581858.1| PREDICTED: high mobility group protein B3-like [Bos taurus]
Length = 197
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKRPPS FF+F EFR K +P + ++ V K GE W +L+D+EK P+ KAA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSANPGI-SIGDVAKKLGEMWNNLSDSEKQPYINKAA 147
Query: 112 KRKLDYEKLMTAYNKK 127
K YEK + Y K
Sbjct: 148 KLXEKYEKDVADYKSK 163
>gi|392575401|gb|EIW68534.1| hypothetical protein TREMEDRAFT_32029 [Tremella mesenterica DSM
1558]
Length = 116
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 57/89 (64%), Gaps = 4/89 (4%)
Query: 39 SNKRTKNVKSA---KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKW 95
++K+T+ K A KKDPN PKR SA+ F++++R K +HP+V + GK GEKW
Sbjct: 11 ASKKTETTKRAPKEKKDPNAPKRGLSAYMFFVQDYRPKIKNDHPDV-SFGETGKLLGEKW 69
Query: 96 KSLTDAEKAPFEAKAAKRKLDYEKLMTAY 124
K+++ AEK PFE AAK KL EK AY
Sbjct: 70 KAMSAAEKKPFEDLAAKDKLRAEKDKKAY 98
>gi|147903143|ref|NP_001079387.1| high mobility group box 2 [Xenopus laevis]
gi|80479234|gb|AAI08500.1| MGC52825 protein [Xenopus laevis]
Length = 211
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKRPPSAFF+F E R K E P + ++ K GE+W T +K PFE KAA
Sbjct: 92 DPNAPKRPPSAFFLFCSEQRPQIKSETPGL-SIGDTAKKLGERWSEQTSKDKLPFEQKAA 150
Query: 112 KRKLDYEKLMTAYNKK 127
K K YEK + AY K
Sbjct: 151 KLKEKYEKDVAAYRAK 166
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DPNKP+ S++ F++ R+ +K++HP+ + K E+WK+++ EK FE
Sbjct: 2 GKGDPNKPRGKMSSYAYFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K+ YE+ M Y
Sbjct: 62 DMAKGDKVRYEREMKTY 78
>gi|27370889|gb|AAH41262.1| MGC52825 protein [Xenopus laevis]
Length = 212
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKRPPSAFF+F E R K E P + ++ K GE+W T +K PFE KAA
Sbjct: 92 DPNAPKRPPSAFFLFCSEQRPQIKSETPGL-SIGDTAKKLGERWSEQTSKDKLPFEQKAA 150
Query: 112 KRKLDYEKLMTAYNKK 127
K K YEK + AY K
Sbjct: 151 KLKEKYEKDVAAYRAK 166
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DPNKP+ S++ F++ R+ +K++HP+ + K E+WK+++ EK FE
Sbjct: 2 GKGDPNKPRGKMSSYAYFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K+ YE+ M Y
Sbjct: 62 DMAKGDKVRYEREMKTY 78
>gi|171680363|ref|XP_001905127.1| hypothetical protein [Podospora anserina S mat+]
gi|170939808|emb|CAP65034.1| unnamed protein product [Podospora anserina S mat+]
Length = 98
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 50/77 (64%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEA 108
KKDPN PKR SA+ F E R+ ++E+P V + VGK GE+WK+L+D ++AP+EA
Sbjct: 19 GKKDPNAPKRGLSAYMFFANEQRENVREENPGV-SFGQVGKILGERWKALSDKQRAPYEA 77
Query: 109 KAAKRKLDYEKLMTAYN 125
KAA K YE AYN
Sbjct: 78 KAAADKKRYEDEKQAYN 94
>gi|342874398|gb|EGU76412.1| hypothetical protein FOXB_13090 [Fusarium oxysporum Fo5176]
Length = 102
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 56/95 (58%), Gaps = 1/95 (1%)
Query: 34 KASRSSNKRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGE 93
KA+ + + K KKDPN PKR SA+ F E R+ ++E+P + + VGK GE
Sbjct: 3 KAAAGKRGKAEKTKRGKKDPNAPKRGLSAYMFFANEQRENVREENPGI-SFGQVGKLLGE 61
Query: 94 KWKSLTDAEKAPFEAKAAKRKLDYEKLMTAYNKKQ 128
+WK+L + ++AP+EAKAA K YE AYN Q
Sbjct: 62 RWKALNEKQRAPYEAKAAADKKRYEDEKQAYNADQ 96
>gi|367006853|ref|XP_003688157.1| hypothetical protein TPHA_0M01480 [Tetrapisispora phaffii CBS 4417]
gi|357526464|emb|CCE65723.1| hypothetical protein TPHA_0M01480 [Tetrapisispora phaffii CBS 4417]
Length = 93
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
KKDPN PKR SA+ F E R + + E+P+V + +G+ GEKW++LTD +K PFEAK
Sbjct: 15 KKDPNAPKRAMSAYMFFANETRDIVRAENPDV-SFGQIGRLLGEKWRALTDEDKGPFEAK 73
Query: 110 AAKRKLDYEKLMTAYN 125
A K YE YN
Sbjct: 74 AQADKKRYESEKELYN 89
>gi|295671102|ref|XP_002796098.1| nucleosome binding protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226284231|gb|EEH39797.1| nucleosome binding protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 103
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 53/84 (63%), Gaps = 1/84 (1%)
Query: 42 RTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDA 101
+T+ V+ KKDPN PKR SA+ F E R ++E+P + + VGK GE+WK+L +
Sbjct: 12 KTRGVEKKKKDPNAPKRGLSAYMFFANEQRDNVREENPGI-SFGQVGKVLGERWKALNEK 70
Query: 102 EKAPFEAKAAKRKLDYEKLMTAYN 125
++AP+EAKAA K YE +YN
Sbjct: 71 QRAPYEAKAAADKKRYEDEKASYN 94
>gi|349802605|gb|AEQ16775.1| putative high mobility group box 3 [Pipa carvalhoi]
Length = 149
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKRPPS FF+F EFR K +P + ++ V K GE W +L + EK P+ KAA
Sbjct: 64 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGI-SIGDVAKKLGEMWNNLNEGEKQPYNNKAA 122
Query: 112 KRKLDYEKLMTAYNKK 127
K K YEK + Y K
Sbjct: 123 KLKEKYEKDVADYKSK 138
>gi|401402785|ref|XP_003881334.1| high mobility group protein, related [Neospora caninum Liverpool]
gi|325115746|emb|CBZ51301.1| high mobility group protein, related [Neospora caninum Liverpool]
Length = 94
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 53/79 (67%), Gaps = 1/79 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
AKKDPN PKRP SAF F ++ R+ +++P +K+ ++ VGK GE W L+DA+K P+E
Sbjct: 13 AKKDPNAPKRPLSAFIFFSKDKREEIIRKNPELKSKLAEVGKMVGEAWGKLSDAQKKPYE 72
Query: 108 AKAAKRKLDYEKLMTAYNK 126
+KA K YE+ M AY K
Sbjct: 73 SKAVADKARYEREMIAYKK 91
>gi|154284354|ref|XP_001542972.1| nucleosome binding protein [Ajellomyces capsulatus NAm1]
gi|150406613|gb|EDN02154.1| nucleosome binding protein [Ajellomyces capsulatus NAm1]
gi|240273630|gb|EER37150.1| nucleosome binding protein [Ajellomyces capsulatus H143]
gi|325087527|gb|EGC40837.1| nucleosome binding protein [Ajellomyces capsulatus H88]
Length = 102
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 58/92 (63%), Gaps = 3/92 (3%)
Query: 34 KASRSSNKRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGE 93
KASR + R+ ++ KKDPN PKR SA+ F E R+ ++E+P + + VGK GE
Sbjct: 5 KASRKTKARS--IEKKKKDPNAPKRGLSAYMFFANEQRENVREENPGI-SFGQVGKVLGE 61
Query: 94 KWKSLTDAEKAPFEAKAAKRKLDYEKLMTAYN 125
+WK+L + ++AP+EAKAA K YE +YN
Sbjct: 62 RWKALNEKQRAPYEAKAAADKKRYEDEKASYN 93
>gi|297798364|ref|XP_002867066.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297312902|gb|EFH43325.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 125
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/95 (51%), Positives = 68/95 (71%), Gaps = 6/95 (6%)
Query: 36 SRSSNKRTKNVKSAK-----KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKA 90
SRS++ R K V+ K KDPNKPK+PPS FFVFL++FR+ + +P+ K+V++VGKA
Sbjct: 10 SRSTDDRLK-VRGNKGGKKTKDPNKPKKPPSPFFVFLDDFRREFNLANPDNKSVASVGKA 68
Query: 91 GGEKWKSLTDAEKAPFEAKAAKRKLDYEKLMTAYN 125
G+KWKS+T+ +KAPF AKA +K +Y M YN
Sbjct: 69 AGKKWKSMTEEDKAPFVAKAKSKKTEYAATMQQYN 103
>gi|327268628|ref|XP_003219098.1| PREDICTED: high mobility group protein B2-like [Anolis
carolinensis]
Length = 209
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
+KDPN PKRPPSAFF+F E R K +HP + ++ K GE W T +K PFE K
Sbjct: 87 RKDPNAPKRPPSAFFLFCSEHRPKIKSDHPGL-SIGDTAKKLGEMWSLQTAKDKLPFEQK 145
Query: 110 AAKRKLDYEKLMTAYNKK 127
A K K Y+K + AY K
Sbjct: 146 ALKLKEKYDKDIAAYRAK 163
Score = 42.4 bits (98), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DPNKP+ S++ F++ R+ +K++HP+ + K E+W++++ EK FE
Sbjct: 2 GKGDPNKPRGKMSSYAYFVQTCREEHKKKHPDSSVNFAEFSKKCSERWRTMSAKEKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K Y++ M Y
Sbjct: 62 DMAKGDKARYDREMKNY 78
>gi|303304752|emb|CBD77423.1| high mobility group box 2 protein [Plecoglossus altivelis]
Length = 215
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKRPPSAFFVF + R K E+P + ++ + K GE W T +K P+EAKA
Sbjct: 92 DPNAPKRPPSAFFVFCSDHRARIKGENPGI-SIGDIAKKLGELWSKQTPKDKQPYEAKAG 150
Query: 112 KRKLDYEKLMTAYNKK 127
K K YEK + AY K
Sbjct: 151 KLKEKYEKDVAAYRAK 166
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFEAK 109
KDPNKP+ S++ F++ R+ +K++HP S K E+WK+++ EK FE
Sbjct: 4 KDPNKPRGKTSSYAFFVQTCREEHKKKHPGTSVNFSEFSKKCSERWKTMSAKEKVKFEDL 63
Query: 110 AAKRKLDYEKLMTAY 124
A K+ Y++ M Y
Sbjct: 64 AKGDKVRYDREMKGY 78
>gi|156837652|ref|XP_001642846.1| hypothetical protein Kpol_376p1 [Vanderwaltozyma polyspora DSM
70294]
gi|156113421|gb|EDO14988.1| hypothetical protein Kpol_376p1 [Vanderwaltozyma polyspora DSM
70294]
Length = 93
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/93 (46%), Positives = 53/93 (56%), Gaps = 4/93 (4%)
Query: 33 LKASRSSNKRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGG 92
+ A R S KRT KKDPN PKR SA+ F E R + + E+P+V + VG+ G
Sbjct: 1 MAAPRESKKRTTR---RKKDPNAPKRALSAYMFFANETRDIVRAENPDV-SFGQVGRILG 56
Query: 93 EKWKSLTDAEKAPFEAKAAKRKLDYEKLMTAYN 125
EKWK+LT +K PFEAKA K YE YN
Sbjct: 57 EKWKALTPEDKVPFEAKAEADKKRYESEKELYN 89
>gi|395844161|ref|XP_003794831.1| PREDICTED: uncharacterized protein LOC100953571 [Otolemur
garnettii]
Length = 357
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
KKDPN PK PPS FF+F EFR K +P + ++ V K GE W SL+D+EK P+ K
Sbjct: 253 KKDPNAPKTPPSGFFLFCSEFRPKIKSTNPGI-SIGDVAKKLGEMWNSLSDSEKQPYITK 311
Query: 110 AAKRKLDYEKLMTAYNKK 127
AA+ K EK + Y K
Sbjct: 312 AAQLKEKDEKDVADYKSK 329
Score = 35.4 bits (80), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 37 RSSNKRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKW 95
R +VK AK+DP KPK A+ F++ R+ +K+++P V ++ K E+W
Sbjct: 157 RGPEGENNSVKIAKRDPKKPKGKMPAYAFFVQTCREEHKKKNPEVPVNLAEFSKKCSERW 216
Query: 96 KSLTDAEKAPFE--AKAAKRKLDYE 118
K+ + EK+ + AKA K D E
Sbjct: 217 KATSGKEKSKSDEMAKADKVCCDRE 241
>gi|326918606|ref|XP_003205579.1| PREDICTED: high mobility group protein B2-like [Meleagris
gallopavo]
Length = 246
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKRPPSAFF+F E R K +HP + ++ K GE W + +K P+E KAA
Sbjct: 129 DPNAPKRPPSAFFLFCSEHRPKIKNDHPGL-SIGDTAKKLGEMWSEQSAKDKQPYEQKAA 187
Query: 112 KRKLDYEKLMTAYNKK 127
K K YEK + AY K
Sbjct: 188 KLKEKYEKDIAAYRAK 203
>gi|225556517|gb|EEH04805.1| non-histone chromosomal protein 6 [Ajellomyces capsulatus G186AR]
Length = 102
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 58/92 (63%), Gaps = 3/92 (3%)
Query: 34 KASRSSNKRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGE 93
KASR + R+ ++ KKDPN PKR SA+ F E R+ ++E+P + + VGK GE
Sbjct: 5 KASRKTKPRS--IEKKKKDPNAPKRGLSAYMFFANEQRENVREENPGI-SFGQVGKVLGE 61
Query: 94 KWKSLTDAEKAPFEAKAAKRKLDYEKLMTAYN 125
+WK+L + ++AP+EAKAA K YE +YN
Sbjct: 62 RWKALNEKQRAPYEAKAAADKKRYEDEKASYN 93
>gi|82658290|ref|NP_001032501.1| high mobility group protein B2 [Danio rerio]
gi|81294190|gb|AAI07992.1| Zgc:123215 [Danio rerio]
Length = 213
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKRPPSAFFVF + R K ++P + ++ + K GE W L+ EK+P+E KA
Sbjct: 91 DPNAPKRPPSAFFVFCSDHRPKVKGDNPGI-SIGDIAKKLGEMWSKLSPKEKSPYEQKAM 149
Query: 112 KRKLDYEKLMTAYNKK 127
K K YEK + AY K
Sbjct: 150 KLKEKYEKDVAAYRAK 165
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFEAK 109
KDPNKP+ S++ F++ R+ +K+++P S K E+W++++ EK FE
Sbjct: 3 KDPNKPRGKTSSYAFFVQTCREEHKKKNPGTSVNFSEFSKKCSERWRTMSSKEKGKFEEM 62
Query: 110 AAKRKLDYEKLMTAY 124
A K+ Y++ M Y
Sbjct: 63 AKTDKVRYDREMKNY 77
>gi|444510285|gb|ELV09567.1| High mobility group protein B3 [Tupaia chinensis]
Length = 197
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKRPPS FF+F EFR K +P + ++ V K GE W +L+D+EK P+ KAA
Sbjct: 77 DPNAPKRPPSGFFLFCSEFRPKIKSTNPGI-SIGDVAKKLGEMWNNLSDSEKQPYITKAA 135
Query: 112 KRKLDYEKLMTA 123
K K + L T
Sbjct: 136 KLKENCSSLGTC 147
>gi|392337480|ref|XP_003753270.1| PREDICTED: high mobility group protein B1-like [Rattus norvegicus]
gi|392343959|ref|XP_003748829.1| PREDICTED: high mobility group protein B1-like [Rattus norvegicus]
Length = 215
Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F E+R K EHP + ++ V K GE W + +K P+ A
Sbjct: 90 KDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWTNTAADDKQPYGKMA 148
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + AY K
Sbjct: 149 AKLKEKYEKDIAAYRAK 165
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DP KP+ S++ F++ R+ +K++HP+ S K E+WK+++ EK E
Sbjct: 2 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKCE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K YE+ M Y
Sbjct: 62 DMAKADKARYEREMKTY 78
>gi|449270893|gb|EMC81539.1| High mobility group protein B2 [Columba livia]
Length = 207
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKRPPSAFF+F E R K +HP + ++ K GE W + +K P+E KAA
Sbjct: 91 DPNAPKRPPSAFFLFCSEHRPKIKNDHPGL-SIGDTAKKLGEMWSEQSAKDKQPYEQKAA 149
Query: 112 KRKLDYEKLMTAYNKK 127
K K YEK + AY K
Sbjct: 150 KLKEKYEKDIAAYRAK 165
Score = 43.1 bits (100), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DPNKP+ S++ F++ R+ +K++HP+ + + E+WK+++ EK FE
Sbjct: 2 GKGDPNKPRGKMSSYAYFVQTCREEHKKKHPDSSVNFAEFSRKCSERWKTMSSKEKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K Y++ M Y
Sbjct: 62 EMAKGDKARYDREMKNY 78
>gi|407926962|gb|EKG19868.1| High mobility group HMG1/HMG2 [Macrophomina phaseolina MS6]
Length = 106
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
KKDPN PKR SA+ F + R ++E+P +K VGK GE+WK+L++ ++AP+EAK
Sbjct: 21 KKDPNAPKRGLSAYMFFANDMRDKVREENPGIK-FGEVGKILGERWKALSEKQRAPYEAK 79
Query: 110 AAKRKLDYEKLMTAYN 125
AA K YE AYN
Sbjct: 80 AANDKKRYEDEKAAYN 95
>gi|27881711|gb|AAH44715.1| MGC52578 protein [Xenopus laevis]
Length = 212
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
KKDPN PKRPPSAFF+F E R K E P + ++ K GE W T +K P E K
Sbjct: 90 KKDPNAPKRPPSAFFIFCSEHRPQIKSETPGL-SIGDTAKKLGELWAEQTPKDKLPHEQK 148
Query: 110 AAKRKLDYEKLMTAYNKK 127
AAK K YEK + AY K
Sbjct: 149 AAKLKEKYEKDVAAYRAK 166
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DPNKP+ S++ F++ R+ +K++HP+ S K E+WKS++ EK FE
Sbjct: 2 GKGDPNKPRGKMSSYAYFVQTCREEHKKKHPDTSVNFSEFSKKCSERWKSMSAKEKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K YE+ M Y
Sbjct: 62 DLAKGDKARYEREMKTY 78
>gi|211929|gb|AAA48819.1| high-mobility group-2 protein [Gallus gallus]
Length = 207
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKRPPSAFF+F E R K +HP + ++ K GE W + +K P+E KAA
Sbjct: 91 DPNAPKRPPSAFFLFCSEHRPKIKNDHPGL-SIGDTAKKLGEMWSEQSAKDKQPYEQKAA 149
Query: 112 KRKLDYEKLMTAYNKK 127
K K YEK + AY K
Sbjct: 150 KLKEKYEKDIAAYRAK 165
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DPNKP+ S++ F++ + +K++HP+ + + E+WK+++ EK FE
Sbjct: 2 GKGDPNKPRGKMSSYAYFVQTCPREHKKKHPDSSVNFAEFSRKCSERWKTMSSKEKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K Y++ M Y
Sbjct: 62 EMAKGDKARYDREMKNY 78
>gi|213515010|ref|NP_001133971.1| High mobility group protein B3 [Salmo salar]
gi|209156012|gb|ACI34238.1| High mobility group protein B3 [Salmo salar]
gi|223648118|gb|ACN10817.1| High mobility group protein B3 [Salmo salar]
Length = 206
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Query: 47 KSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPF 106
K KKDPN PKRP S FF+F + R K +HP++ + V K GE+W +LTDA K P+
Sbjct: 84 KGRKKDPNAPKRPSSGFFIFCADHRPKIKAQHPSL-GIGDVAKKLGEQWNNLTDATKQPY 142
Query: 107 EAKAAKRKLDYEKLMTAY 124
KA K K Y+K + Y
Sbjct: 143 LIKANKLKDKYQKDVADY 160
>gi|148223673|ref|NP_001079576.1| HMG-X protein [Xenopus laevis]
gi|639691|dbj|BAA06440.1| HMG-X protein [Xenopus laevis]
Length = 212
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
KKDPN PKRPPSAFF+F E R K E P + ++ K GE W T +K P E K
Sbjct: 90 KKDPNAPKRPPSAFFIFCSEHRPQIKSETPGL-SIGDTAKKLGELWAEQTPKDKLPHEQK 148
Query: 110 AAKRKLDYEKLMTAYNKK 127
AAK K YEK + AY K
Sbjct: 149 AAKLKEKYEKDVAAYRAK 166
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DPNKP+ S++ F++ R+ +K++HP+ S K E+WKS++ EK FE
Sbjct: 2 GKGDPNKPRGKMSSYAYFVQTCREEHKKKHPDTSVNFSDFSKKCSERWKSMSAKEKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K YE+ M Y
Sbjct: 62 DLAKGDKARYEREMKTY 78
>gi|66840992|emb|CAI64395.1| putative high mobility group protein [Triticum aestivum]
Length = 112
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 40/57 (70%)
Query: 55 KPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
KPKR P+ FF FL EFR Y ++HP K V+AV KA GEKW+S++D EKA + K A
Sbjct: 22 KPKRAPTPFFAFLAEFRPQYMEKHPEAKGVAAVTKAAGEKWRSMSDEEKAKYGGKKA 78
>gi|226443200|ref|NP_001140081.1| High mobility group-T protein [Salmo salar]
gi|223649418|gb|ACN11467.1| High mobility group-T protein [Salmo salar]
Length = 345
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 50/77 (64%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRP SAFF+F +FR K E P + ++ V K GEKW +LT +K P+E KA
Sbjct: 231 KDPNAPKRPSSAFFIFCADFRPQVKGETPGL-SIGDVAKKLGEKWNNLTAEDKVPYEKKA 289
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK +TAY K
Sbjct: 290 AKLKEKYEKDITAYRNK 306
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFEAK 109
KDP KP+ S++ F++ R+ +K++HP S K E+WK+++ EK FE
Sbjct: 145 KDPRKPRGKMSSYAYFVQTCREEHKKKHPEASVNFSEFSKKCSERWKTMSAKEKGKFEDL 204
Query: 110 AAKRKLDYEKLMTAY 124
A K+ YE+ M +Y
Sbjct: 205 AKLDKVRYEREMRSY 219
>gi|357165293|ref|XP_003580334.1| PREDICTED: HMG1/2-like protein-like [Brachypodium distachyon]
Length = 135
Score = 68.2 bits (165), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 39/55 (70%)
Query: 55 KPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
KPKR P+ FF FL EFR Y ++HP K V+AV KA GEKW+S++D EKA + K
Sbjct: 26 KPKRAPTPFFAFLAEFRPQYMEKHPEAKGVAAVTKAAGEKWRSMSDEEKAKYGGK 80
>gi|291403518|ref|XP_002718101.1| PREDICTED: high mobility group box 3-like [Oryctolagus cuniculus]
Length = 197
Score = 68.2 bits (165), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKRPPS FF+F EFR K +P + ++ V K GE W +L+D++K + KAA
Sbjct: 89 DPNAPKRPPSRFFLFCSEFRPKIKSTNPGI-SIGDVAKKLGEMWNNLSDSDKQQYITKAA 147
Query: 112 KRKLDYEKLMTAYNKK 127
K K YEK +T Y K
Sbjct: 148 KLKEKYEKDVTDYKSK 163
>gi|255715687|ref|XP_002554125.1| KLTH0E14850p [Lachancea thermotolerans]
gi|238935507|emb|CAR23688.1| KLTH0E14850p [Lachancea thermotolerans CBS 6340]
Length = 93
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 52/93 (55%), Gaps = 4/93 (4%)
Query: 33 LKASRSSNKRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGG 92
+ A R + KRT KKDPN PKR SA+ F E R + + E+P V VG+ G
Sbjct: 1 MSAPREAKKRTTR---RKKDPNAPKRALSAYMFFANENRDIVRAENPGV-TFGQVGRLLG 56
Query: 93 EKWKSLTDAEKAPFEAKAAKRKLDYEKLMTAYN 125
+KWK+LTD EK P+EAK A K YE YN
Sbjct: 57 DKWKALTDEEKQPYEAKHAADKKRYESEKELYN 89
>gi|67484144|ref|XP_657292.1| high mobility group (HMG) box domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|56474548|gb|EAL51913.1| high mobility group (HMG) box domain containing protein [Entamoeba
histolytica HM-1:IMSS]
Length = 114
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Query: 53 PNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAK 112
PN+PKRPP+ +F++L E R K+EHP+++ + + K E+WK+L + EK ++ KA
Sbjct: 26 PNRPKRPPTPYFIYLNEHRASIKEEHPDIR-FTEISKVASEQWKALGEEEKKEYQTKADA 84
Query: 113 RKLDYEKLMTAYNKK 127
K Y+K M YN K
Sbjct: 85 AKEQYKKDMEKYNNK 99
>gi|403295522|ref|XP_003938690.1| PREDICTED: high mobility group protein B3-like [Saimiri boliviensis
boliviensis]
Length = 202
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN KRPPS FF+F EFR K +P + ++ V K GE W +L D+EK P+ KAA
Sbjct: 89 DPNASKRPPSGFFLFCSEFRPKIKSTNPGI-SIGDVAKKLGEMWNNLNDSEKQPYITKAA 147
Query: 112 KRKLDYEKLMTAYNKK 127
K K YEK + Y K
Sbjct: 148 KLKEKYEKDVADYKSK 163
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
AK DP KPK SA+ F++ R+ +K+++P V + K E+WK+++ EK+ F+
Sbjct: 2 AKCDPKKPKGKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFD 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K+ Y++ M Y
Sbjct: 62 EMAKADKVRYDREMKDY 78
>gi|392877702|gb|AFM87683.1| high mobility group box 3 [Callorhinchus milii]
Length = 203
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
KKDPN PKRPPS FF+F + R K P + + V K GE W TD EK P+ AK
Sbjct: 87 KKDPNAPKRPPSGFFLFCSDHRPKIKAGSPGL-TIGDVAKKLGELWNGCTDEEKKPYNAK 145
Query: 110 AAKRKLDYEKLMTAYNKK 127
AAK K YEK + Y K
Sbjct: 146 AAKLKEKYEKDVADYRTK 163
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
AK+DP KP+ S++ F++ R+ +K+++P+V S K E+WK+++ EK+ FE
Sbjct: 2 AKRDPKKPRGKMSSYAYFVQTCREEHKKKNPDVPVNFSDFSKRCSERWKTMSGKEKSKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K+ Y++ M Y
Sbjct: 62 DLAKVDKVRYDREMKTY 78
>gi|62955511|ref|NP_001017769.1| high mobility group protein B3 [Danio rerio]
gi|62202670|gb|AAH93186.1| High-mobility group box 3b [Danio rerio]
gi|182890656|gb|AAI64996.1| Hmgb3b protein [Danio rerio]
Length = 198
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
KKDPN P+RPPS FF+F E R + K ++P++ + V K G W +L+D+EK PF +
Sbjct: 88 KKDPNAPRRPPSGFFLFCAEQRPIIKAQNPSL-GIGDVAKKLGGMWNNLSDSEKQPFLSN 146
Query: 110 AAKRKLDYEKLMTAY 124
A K K Y+K M Y
Sbjct: 147 ADKLKDKYQKDMAFY 161
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
AK DP KPK SA+ F++ R+ + +++P V S K E+WK+++ EK FE
Sbjct: 2 AKGDPGKPKGKMSAYAYFVKTCREEHNKKNPGVTVNFSEFSKKCSERWKTMSPKEKTKFE 61
Query: 108 AKAAKRKLDYEKLMTAYN 125
A + K Y++ M YN
Sbjct: 62 DLAKQDKARYDQEMMHYN 79
>gi|255544145|ref|XP_002513135.1| DNA-binding protein MNB1B, putative [Ricinus communis]
gi|223548146|gb|EEF49638.1| DNA-binding protein MNB1B, putative [Ricinus communis]
Length = 196
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 47/67 (70%)
Query: 59 PPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKLDYE 118
PP+AFF+FL+EFRK +K+ +P+ K V V K GEKWK++TD EK P+ KA + K +Y+
Sbjct: 103 PPTAFFIFLDEFRKTFKEANPDSKDVKRVAKEAGEKWKAMTDEEKKPYADKATELKAEYD 162
Query: 119 KLMTAYN 125
K + N
Sbjct: 163 KALGEVN 169
>gi|326499588|dbj|BAJ86105.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 538
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 50/76 (65%), Gaps = 3/76 (3%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DP+KPK+P SA+F++ +E R E K V +GK GE+WK +T+A+KAP+E A
Sbjct: 330 DPSKPKQPMSAYFLYSQERRGALVAEK---KTVPEIGKITGEEWKGMTEAQKAPYEEAAR 386
Query: 112 KRKLDYEKLMTAYNKK 127
K+K Y+K M YN+K
Sbjct: 387 KQKEAYQKQMEVYNQK 402
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN+PK+P S+F +F +E RK +E P V S + KWK L+ AEK + KAA
Sbjct: 455 DPNRPKKPASSFLLFSKEARKQLAEERPGVNN-STLSALISVKWKDLSSAEKKVWSQKAA 513
Query: 112 KRKLDYEKLMTAYNK 126
+ Y+ M Y K
Sbjct: 514 QGMAAYKMEMDEYTK 528
>gi|237845111|ref|XP_002371853.1| high mobility group protein [Toxoplasma gondii ME49]
gi|211969517|gb|EEB04713.1| high mobility group protein [Toxoplasma gondii ME49]
gi|221480801|gb|EEE19228.1| high mobility group protein, putative [Toxoplasma gondii GT1]
gi|221501467|gb|EEE27242.1| high mobility group protein, putative [Toxoplasma gondii VEG]
Length = 302
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 53/79 (67%), Gaps = 1/79 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
AKKDPN PKRP SAF F ++ R+ +++P +K+ ++ VGK GE W L+DA+K P+E
Sbjct: 221 AKKDPNAPKRPLSAFIFFSKDKREEIIRKNPELKSKLAEVGKMVGEAWGKLSDAQKKPYE 280
Query: 108 AKAAKRKLDYEKLMTAYNK 126
+KA K YE+ M AY K
Sbjct: 281 SKAVADKARYEREMIAYKK 299
>gi|387914026|gb|AFK10622.1| high mobility group box 3 [Callorhinchus milii]
Length = 210
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
KKDPN PKRPPS FF+F + R K P + + V K GE W TD EK P+ AK
Sbjct: 94 KKDPNAPKRPPSGFFLFCSDHRPKIKAGSPGL-TIGDVAKKLGELWNGCTDEEKKPYNAK 152
Query: 110 AAKRKLDYEKLMTAY 124
AAK K YEK + Y
Sbjct: 153 AAKLKEKYEKDVADY 167
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 44 KNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAE 102
K K AK+DP KP+ S++ F++ R+ +K+++P+V S K E+WK+++ E
Sbjct: 4 KITKMAKRDPKKPRGKMSSYAYFVQTCREEHKKKNPDVPVNFSDFSKRCSERWKTMSGKE 63
Query: 103 KAPFEAKAAKRKLDYEKLMTAY 124
K+ FE A K+ Y++ M Y
Sbjct: 64 KSKFEDLAKVDKVRYDREMKTY 85
>gi|320091041|gb|ADW08807.1| high mobility group box X [Lethenteron camtschaticum]
Length = 225
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
KKDPN PKRPPSAFF+F +FR K ++P + + + K GE W T+ KAP+E K
Sbjct: 93 KKDPNAPKRPPSAFFIFCADFRPQIKADNPGM-VIGTIAKRLGEMWGRQTNENKAPYEHK 151
Query: 110 AAKRKLDYEKLMTAYNK 126
A K Y+K + AY +
Sbjct: 152 ANILKEKYKKDVAAYQR 168
Score = 41.6 bits (96), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVK-AVSAVGKAGGEKWKSLTDAEKAPFE 107
+ DP+KP+ S++ F++ R+ +K++HPN A + + E+WK L+ EK FE
Sbjct: 2 GRGDPSKPRGRMSSYAYFVQTCREEHKKKHPNDSVAFTDFSRKCSERWKGLSPKEKLRFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K Y+ M Y
Sbjct: 62 DLARADKTRYDTEMKDY 78
>gi|225681708|gb|EEH19992.1| nucleosome binding protein [Paracoccidioides brasiliensis Pb03]
Length = 103
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 53/84 (63%), Gaps = 1/84 (1%)
Query: 42 RTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDA 101
+++ V+ KKDPN PKR SA+ F E R ++E+P + + VGK GE+WK+L +
Sbjct: 12 KSRGVEKKKKDPNAPKRGLSAYMFFANEQRDNVREENPGI-SFGQVGKVLGERWKALNEK 70
Query: 102 EKAPFEAKAAKRKLDYEKLMTAYN 125
++AP+EAKAA K YE +YN
Sbjct: 71 QRAPYEAKAAADKKRYEDEKASYN 94
>gi|302652822|ref|XP_003018251.1| hypothetical protein TRV_07738 [Trichophyton verrucosum HKI 0517]
gi|291181876|gb|EFE37606.1| hypothetical protein TRV_07738 [Trichophyton verrucosum HKI 0517]
Length = 132
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKR SA+ +F E R ++E+PN+ VGK GE+WK+L+D ++ P+E KAA
Sbjct: 60 DPNAPKRGLSAYMIFANEQRAAVREENPNI-TFGQVGKVLGERWKALSDKQRVPYEEKAA 118
Query: 112 KRKLDYEKLMTAYN 125
K YE AYN
Sbjct: 119 TDKQRYEDEKAAYN 132
>gi|213514690|ref|NP_001133170.1| high-mobility group box 2 [Salmo salar]
gi|197632301|gb|ACH70874.1| high-mobility group box 2 [Salmo salar]
gi|221219834|gb|ACM08578.1| High mobility group protein B2 [Salmo salar]
gi|221220870|gb|ACM09096.1| High mobility group protein B2 [Salmo salar]
gi|223646276|gb|ACN09896.1| High mobility group protein B2 [Salmo salar]
gi|223646962|gb|ACN10239.1| High mobility group protein B2 [Salmo salar]
gi|223672123|gb|ACN12243.1| High mobility group protein B2 [Salmo salar]
gi|223672825|gb|ACN12594.1| High mobility group protein B2 [Salmo salar]
Length = 214
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 53/94 (56%), Gaps = 8/94 (8%)
Query: 34 KASRSSNKRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGE 93
K S+++ KR KKDPN PKRPPSAFFVF E R K ++P + + + K G
Sbjct: 82 KGSKAAGKR-------KKDPNAPKRPPSAFFVFCAEHRGRIKADNPGM-GIGDIAKQLGL 133
Query: 94 KWKSLTDAEKAPFEAKAAKRKLDYEKLMTAYNKK 127
W T +K P EAKAAK K YEK + AY K
Sbjct: 134 LWGKQTPKDKLPHEAKAAKLKEKYEKDVAAYKAK 167
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFEAK 109
KDPNKPK S++ F+ R+ +K++HP S K E+W++++ EK FE
Sbjct: 4 KDPNKPKGKTSSYAFFVATCREEHKKKHPGTSVNFSEFSKKCSERWRTMSAKEKVKFEDM 63
Query: 110 AAKRKLDYEKLMTAY 124
A K+ Y+K M Y
Sbjct: 64 AKGDKVRYDKDMKGY 78
>gi|351710199|gb|EHB13118.1| High mobility group protein B3 [Heterocephalus glaber]
Length = 191
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
KKDPN KRPPS FF+F EF K +P + ++ V K GE W +L D+EK P+ K
Sbjct: 87 KKDPNATKRPPSGFFLFCSEFHPKIKSTNPGI-SIGDVAKKLGEMWNNLNDSEKQPYITK 145
Query: 110 AAKRKLDYEKLMTA 123
AAK K YEK + A
Sbjct: 146 AAKLKEKYEKDVAA 159
Score = 35.0 bits (79), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 61 SAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKLDYEK 119
SA+ F++ R+ +K+++P+V + K E+WK+++ EK+ F+ A K+ Y++
Sbjct: 14 SAYAFFVQTCREEHKKKNPDVPVNFAEFSKKCSERWKTVSGKEKSKFDEMAKADKVHYDR 73
Query: 120 LMTAY 124
M Y
Sbjct: 74 EMKDY 78
>gi|118344422|ref|NP_001072036.1| transcription factor protein [Ciona intestinalis]
gi|70570508|dbj|BAE06614.1| transcription factor protein [Ciona intestinalis]
Length = 447
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 60/100 (60%), Gaps = 6/100 (6%)
Query: 28 KRKAVLKASRSSNKRTKNVKSAKK---DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAV 84
+++ L+ SR +R + K+ +K DPN+PKRPPSA+F+FL +FRK Y + K +
Sbjct: 236 EKEPFLELSRRDRERWQKDKALEKKPRDPNRPKRPPSAYFLFLADFRKNYPGKSDPAKEI 295
Query: 85 SAVGKAGGEKWKSLTDAEKAPFEAKAAKRKLDYEKLMTAY 124
+ K GE W SL+DAEK P+ A + +E+ + AY
Sbjct: 296 T---KKAGEAWNSLSDAEKTPYYRSAQLVRAKWEQDLEAY 332
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 29/50 (58%)
Query: 57 KRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPF 106
KRP +A+ F+ ++R+ K+ V + +A EKW+++ + EK PF
Sbjct: 191 KRPTTAYLYFVSKYRETLKEAGEVVPKAKIITQACAEKWRNMNEEEKEPF 240
>gi|609553|gb|AAA74556.1| HMG-T2 [Oncorhynchus mykiss]
Length = 215
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 53/94 (56%), Gaps = 8/94 (8%)
Query: 34 KASRSSNKRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGE 93
K S+++ KR KKDPN PKRPPSAFFVF E R K ++P + + + K G
Sbjct: 82 KGSKAAGKR-------KKDPNAPKRPPSAFFVFCAEHRGRIKADNPGM-GIGDIAKQLGL 133
Query: 94 KWKSLTDAEKAPFEAKAAKRKLDYEKLMTAYNKK 127
W T +K P EAKAAK K YEK + AY K
Sbjct: 134 LWGKQTPKDKQPHEAKAAKLKEKYEKDVAAYKAK 167
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFEAK 109
KDPNKPK S++ F+ R+ +K++HP S K E+W++++ EK FE
Sbjct: 4 KDPNKPKGKTSSYAFFVATCREEHKKKHPGTSVNFSEFSKKCSERWRTMSAKEKVKFEDM 63
Query: 110 AAKRKLDYEKLMTAY 124
A K+ Y+K M Y
Sbjct: 64 AKGDKVRYDKDMKGY 78
>gi|221221606|gb|ACM09464.1| High mobility group protein B2 [Salmo salar]
gi|223646184|gb|ACN09850.1| High mobility group protein B2 [Salmo salar]
gi|223646756|gb|ACN10136.1| High mobility group protein B2 [Salmo salar]
gi|223672031|gb|ACN12197.1| High mobility group protein B2 [Salmo salar]
gi|223672611|gb|ACN12487.1| High mobility group protein B2 [Salmo salar]
Length = 214
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 53/94 (56%), Gaps = 8/94 (8%)
Query: 34 KASRSSNKRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGE 93
K S+++ KR KKDPN PKRPPSAFFVF E R K ++P + + + K G
Sbjct: 82 KGSKAAGKR-------KKDPNAPKRPPSAFFVFCAEHRGRIKADNPGM-GIGDIAKQLGL 133
Query: 94 KWKSLTDAEKAPFEAKAAKRKLDYEKLMTAYNKK 127
W T +K P EAKAAK K YEK + AY K
Sbjct: 134 LWGKQTPKDKQPHEAKAAKLKEKYEKDVAAYKAK 167
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFEAK 109
KDPNKPK S++ F+ R+ +K++HP S K E+W++++ EK FE
Sbjct: 4 KDPNKPKGKTSSYAFFVATCREEHKKKHPGTSVNFSEFSKKCSERWRTMSAKEKVKFEDM 63
Query: 110 AAKRKLDYEKLMTAY 124
A K+ Y+K M Y
Sbjct: 64 AKGDKVRYDKDMKGY 78
>gi|28279681|gb|AAH45917.1| High-mobility group box 1 [Danio rerio]
gi|182891806|gb|AAI65307.1| Hmgb1 protein [Danio rerio]
Length = 205
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F EFR K+E P + ++ V K GE W ++ EK P+E KA
Sbjct: 89 KDPNAPKRPPSAFFIFCSEFRPKVKEETPGL-SIGDVAKRLGEMWNKISSEEKQPYEKKA 147
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + AY K
Sbjct: 148 AKLKEKYEKDIAAYRSK 164
Score = 42.7 bits (99), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFEAK 109
KDP KP+ S++ F++ R+ +K++HP S K E+WK+++ EK FE
Sbjct: 3 KDPTKPRGKMSSYAYFVQTCREEHKKKHPEATVNFSEFSKKCSERWKTMSAKEKGKFEDM 62
Query: 110 AAKRKLDYEKLMTAY 124
A K YE+ M Y
Sbjct: 63 AKLDKARYEREMKNY 77
>gi|42476233|ref|NP_955849.2| high mobility group protein B1 [Danio rerio]
gi|37681827|gb|AAQ97791.1| high-mobility group box 1 [Danio rerio]
gi|45595607|gb|AAH67193.1| High-mobility group box 1 [Danio rerio]
Length = 205
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F EFR K+E P + ++ V K GE W ++ EK P+E KA
Sbjct: 89 KDPNAPKRPPSAFFIFCSEFRPKVKEETPGL-SIGDVAKRLGEMWNKISSEEKQPYEKKA 147
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + AY K
Sbjct: 148 AKLKEKYEKDIAAYRSK 164
Score = 42.7 bits (99), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFEAK 109
KDP KP+ S++ F++ R+ +K++HP S K E+WK+++ EK FE
Sbjct: 3 KDPTKPRGKMSSYAYFVQTCREEHKKKHPEATVNFSEFSKKCSERWKTMSAKEKGKFEDM 62
Query: 110 AAKRKLDYEKLMTAY 124
A K YE+ M Y
Sbjct: 63 AKLDKARYEREMKNY 77
>gi|118343940|ref|NP_001071792.1| transcription factor protein [Ciona intestinalis]
gi|70570753|dbj|BAE06615.1| transcription factor protein [Ciona intestinalis]
Length = 310
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 60/100 (60%), Gaps = 6/100 (6%)
Query: 28 KRKAVLKASRSSNKRTKNVKSAKK---DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAV 84
+++ L+ SR +R + K+ +K DPN+PKRPPSA+F+FL +FRK Y + K +
Sbjct: 99 EKEPFLELSRRDRERWQKDKALEKKPRDPNRPKRPPSAYFLFLADFRKNYPGKSDPAKEI 158
Query: 85 SAVGKAGGEKWKSLTDAEKAPFEAKAAKRKLDYEKLMTAY 124
+ K GE W SL+DAEK P+ A + +E+ + AY
Sbjct: 159 T---KKAGEAWNSLSDAEKTPYYRSAQLVRAKWEQDLEAY 195
Score = 37.4 bits (85), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 29/50 (58%)
Query: 57 KRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPF 106
KRP +A+ F+ ++R+ K+ V + +A EKW+++ + EK PF
Sbjct: 54 KRPTTAYLYFVSKYRETLKEAGEVVPKAKIITQACAEKWRNMNEEEKEPF 103
>gi|45382755|ref|NP_990817.1| high mobility group protein B2 [Gallus gallus]
gi|123373|sp|P26584.2|HMGB2_CHICK RecName: Full=High mobility group protein B2; AltName: Full=High
mobility group protein 2; Short=HMG-2
gi|211927|gb|AAA48818.1| non-histone chromosomal protein [Gallus gallus]
Length = 207
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKRPPSAFF+F E R K +HP + ++ K GE W +K P+E KAA
Sbjct: 91 DPNAPKRPPSAFFLFCSEHRPKIKNDHPGL-SIGDTAKKLGEMWSEQLAKDKQPYEQKAA 149
Query: 112 KRKLDYEKLMTAYNKK 127
K K YEK + AY K
Sbjct: 150 KLKEKYEKDIAAYRAK 165
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DPNKP+ S++ F++ R+ +K++HP+ + + E+WK+++ EK FE
Sbjct: 2 GKGDPNKPRGKMSSYAYFVQTCREEHKKKHPDSSVNFAEFSRKCSERWKTMSSKEKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K Y++ M Y
Sbjct: 62 EMAKGDKARYDREMKNY 78
>gi|380476672|emb|CCF44585.1| non-histone chromosomal protein 6 [Colletotrichum higginsianum]
Length = 96
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 47 KSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPF 106
K AKKDPN PKR SA+ F E R+ ++E+P + + VGK GE+WK+L + ++ P+
Sbjct: 17 KRAKKDPNAPKRGLSAYMFFANEQRENVREENPGI-SFGQVGKILGERWKALNEKQRQPY 75
Query: 107 EAKAAKRKLDYEKLMTAYN 125
EAKAA K YE AYN
Sbjct: 76 EAKAATDKKRYEDEKQAYN 94
>gi|300677966|gb|ADK27290.1| high-mobility-group B1a [Gekko japonicus]
Length = 215
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F EFR K EHP + ++ V K GE W + +K PFE KA
Sbjct: 90 KDPNAPKRPPSAFFLFCSEFRPKIKGEHPGL-SIGDVAKKLGEMWNNTAGDDKQPFEKKA 148
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + AY K
Sbjct: 149 AKLKEKYEKDIAAYRAK 165
Score = 44.3 bits (103), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DP KP+ S++ F++ R+ +K++HP+ S K E+WK+++ EK FE
Sbjct: 2 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K+ YE+ M Y
Sbjct: 62 EMAKGDKVRYEREMKNY 78
>gi|346324407|gb|EGX94004.1| nucleosome binding protein [Cordyceps militaris CM01]
Length = 96
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 47 KSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPF 106
K AKKDPN PKR SA+ F E R ++E+P V + VGK GE+WK+L++ ++ P+
Sbjct: 17 KRAKKDPNAPKRGLSAYMFFANEQRDNVREENPGV-SFGQVGKILGERWKALSEKQRVPY 75
Query: 107 EAKAAKRKLDYEKLMTAYN 125
EAKAA K YE AYN
Sbjct: 76 EAKAAADKKRYEDEKAAYN 94
>gi|406862701|gb|EKD15750.1| nucleosome binding protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 102
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
KKDPN PKR SA+ F E R+ ++E+P + VGK GE+WK+L D ++ P+EAK
Sbjct: 19 KKDPNAPKRGLSAYMFFANEQRENVREENPGI-TFGQVGKVLGERWKALNDKQRTPYEAK 77
Query: 110 AAKRKLDYEKLMTAYN 125
AA+ K YE +YN
Sbjct: 78 AAQDKKRYEDEKASYN 93
>gi|340992807|gb|EGS23362.1| hypothetical protein CTHT_0010300 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 104
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKR SA+ F E R ++E+P + + VGK GE+WK+LTD ++AP+EAKAA
Sbjct: 21 DPNAPKRGLSAYMFFANEQRDNVREENPGI-SFGQVGKILGERWKALTDKQRAPYEAKAA 79
Query: 112 KRKLDYEKLMTAYN 125
K YE AYN
Sbjct: 80 ADKKRYEDEKQAYN 93
>gi|340520749|gb|EGR50985.1| predicted protein [Trichoderma reesei QM6a]
Length = 83
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
+DPN PKR SA+ F E R+ ++E+P + + VGK GE+WK+L D ++AP+EAKA
Sbjct: 2 QDPNAPKRGLSAYMFFANEQRENVREENPGI-SFGQVGKLLGERWKALNDKQRAPYEAKA 60
Query: 111 AKRKLDYEKLMTAYNKKQ 128
A K YE AYN Q
Sbjct: 61 AADKKRYEDEKQAYNADQ 78
>gi|109490746|ref|XP_001074778.1| PREDICTED: high mobility group protein B1-like [Rattus norvegicus]
gi|392351213|ref|XP_003750876.1| PREDICTED: high mobility group protein B1-like [Rattus norvegicus]
Length = 211
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PK PPSAFF+F E+R K EHP + ++ V K GE W + +K P+E A
Sbjct: 90 KDPNAPKTPPSAFFLFCSEYRPKIKGEHPGL-SIGDVVKKLGEMWTNTAADDKQPYEKMA 148
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + AY K
Sbjct: 149 AKLKEKYEKDIAAYRAK 165
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DP K + S++ F++ R+ +K++HP+ S K E+WK+++ EK FE
Sbjct: 2 GKGDPKKLRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K YE+ M Y
Sbjct: 62 DMAKADKARYEREMKTY 78
>gi|45360483|ref|NP_988904.1| high mobility group box 2 [Xenopus (Silurana) tropicalis]
gi|38181929|gb|AAH61601.1| high-mobility group box 2 [Xenopus (Silurana) tropicalis]
Length = 212
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKRPPSAFF+F E R K E P + ++ K GE W T +K P+E KAA
Sbjct: 92 DPNAPKRPPSAFFLFCSEHRPQIKSESPGL-SIGDTAKKLGEMWSEQTPKDKLPYEQKAA 150
Query: 112 KRKLDYEKLMTAY 124
K K YEK + AY
Sbjct: 151 KLKEKYEKDVAAY 163
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DPNKP+ S++ F++ R+ +K++HP+ + K E+WK+++ EK+ FE
Sbjct: 2 GKGDPNKPRGKMSSYAYFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K+ YE+ M Y
Sbjct: 62 EMAKNDKVRYEREMKTY 78
>gi|351706443|gb|EHB09362.1| High mobility group protein B3 [Heterocephalus glaber]
Length = 226
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKRPPS FF+F EFR K P + + V K GE W +L+D+EK P+ K A
Sbjct: 108 DPNAPKRPPSGFFLFCSEFRPKIKSTKPGI-TIGDVAKKLGEMWNNLSDSEKQPYITKVA 166
Query: 112 KRKLDYEKLMTAYNKK 127
K K +EK + Y K
Sbjct: 167 KLKEKHEKDVADYKSK 182
>gi|342319487|gb|EGU11435.1| Non-histone chromosomal protein [Rhodotorula glutinis ATCC 204091]
Length = 142
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 52/83 (62%), Gaps = 6/83 (7%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNV------KAVSAVGKAGGEKWKSLTDAE 102
AKKDPN PKRP SA+ F ++ R V K+E+P+V +++ +GK G KWK L + E
Sbjct: 18 AKKDPNAPKRPLSAYMHFSQDQRSVVKEENPDVTFVGHCESIGEIGKILGAKWKELPEDE 77
Query: 103 KAPFEAKAAKRKLDYEKLMTAYN 125
+ P+E KA+ K YEK AY+
Sbjct: 78 RKPYEEKASADKSRYEKEKAAYD 100
>gi|225703866|gb|ACO07779.1| High mobility group protein B1 [Oncorhynchus mykiss]
Length = 194
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F +FR K EHP + ++ K G W S EK P+E KA
Sbjct: 89 KDPNAPKRPPSAFFIFCADFRAKIKSEHPGL-SIGDTAKKLGVMWNSSAAEEKKPYEKKA 147
Query: 111 AKRKLDYEKLMTAY 124
A K Y+K + +Y
Sbjct: 148 ATLKEKYDKDIASY 161
Score = 42.7 bits (99), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFEAK 109
KDP KP+ S++ F++ R +K++HP + K E+WK ++ EK FE
Sbjct: 3 KDPRKPRGKMSSYAYFVQTCRAEHKKKHPEASVNFAEFSKKCSERWKPMSPKEKGKFEDM 62
Query: 110 AAKRKLDYEKLMTAY 124
A + K+ YE+ M Y
Sbjct: 63 AKQDKVRYEREMKNY 77
>gi|221221922|gb|ACM09622.1| High mobility group protein B1 [Salmo salar]
Length = 196
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F +FR K EHP + ++ K G W S EK P+E KA
Sbjct: 89 KDPNAPKRPPSAFFIFCADFRAKIKSEHPGL-SIGDTAKKLGVMWNSSAAEEKKPYEKKA 147
Query: 111 AKRKLDYEKLMTAY 124
A K Y+K + +Y
Sbjct: 148 ATLKEKYDKDIASY 161
Score = 42.7 bits (99), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFEAK 109
KDP KP+ S++ F++ R +K++HP + K E+WK ++ EK FE
Sbjct: 3 KDPRKPRGKMSSYAYFVQTCRAEHKKKHPEASVNFAEFSKKCSERWKPMSPKEKGKFEDM 62
Query: 110 AAKRKLDYEKLMTAY 124
A + K+ YE+ M Y
Sbjct: 63 AKQDKVRYEREMKNY 77
>gi|221219434|gb|ACM08378.1| High mobility group protein B1 [Salmo salar]
Length = 196
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F +FR K EHP + ++ K G W S EK P+E KA
Sbjct: 89 KDPNAPKRPPSAFFIFCADFRAKIKSEHPGL-SIGDTAKKLGVMWNSSAAEEKKPYEKKA 147
Query: 111 AKRKLDYEKLMTAY 124
A K Y+K + +Y
Sbjct: 148 ATLKEKYDKDIASY 161
Score = 42.7 bits (99), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFEAK 109
KDP KP+ S++ F++ R +K++HP + K E+WK ++ EK FE
Sbjct: 3 KDPRKPRGKMSSYAYFVQTCRAEHKKKHPEASVNFAEFSKKCSERWKPMSPKEKGKFEDM 62
Query: 110 AAKRKLDYEKLMTAY 124
A + K+ YE+ M Y
Sbjct: 63 AKQDKVRYEREMKNY 77
>gi|348566777|ref|XP_003469178.1| PREDICTED: high mobility group protein B2-like [Cavia porcellus]
Length = 211
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 53 PNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAK 112
PN PKRPPSAFF+F E R K EHP + ++ K GE W + +K P+E KAAK
Sbjct: 93 PNAPKRPPSAFFLFCSEHRPKIKSEHPGL-SIGDTAKKLGEMWSEQSAKDKQPYEQKAAK 151
Query: 113 RKLDYEKLMTAYNKK 127
K YEK + AY K
Sbjct: 152 LKEKYEKDIAAYRAK 166
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DPNKP+ S++ F++ R+ +K++HP+ + K E+WK+++ EK+ FE
Sbjct: 2 GKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K Y++ M Y
Sbjct: 62 DMAKSDKARYDREMKNY 78
>gi|225704132|gb|ACO07912.1| High mobility group protein B1 [Oncorhynchus mykiss]
Length = 194
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F +FR K EHP + ++ K G W S EK P+E KA
Sbjct: 89 KDPNAPKRPPSAFFIFCADFRAKIKSEHPGL-SIGDTAKKLGVMWNSSAAEEKKPYEKKA 147
Query: 111 AKRKLDYEKLMTAY 124
A K Y+K + +Y
Sbjct: 148 ATLKEKYDKDIASY 161
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFEAK 109
KDP KP+ S++ F++ R +K++HP + K E+WK ++ EK FE
Sbjct: 3 KDPRKPRGKMSSYAYFVQTCRAEHKKKHPEASVNFAEFSKKCSERWKPMSPKEKGKFEDM 62
Query: 110 AAKRKLDYEKLMTAY 124
A + K+ YE M Y
Sbjct: 63 AKQDKVRYEGEMKNY 77
>gi|223646906|gb|ACN10211.1| High mobility group-T protein [Salmo salar]
gi|223672769|gb|ACN12566.1| High mobility group-T protein [Salmo salar]
Length = 203
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 50/77 (64%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRP SAFF+F +FR K E P + ++ V K GEKW +LT +K P+E KA
Sbjct: 89 KDPNAPKRPSSAFFIFCADFRPQVKGETPGL-SIGDVAKKLGEKWNNLTAEDKVPYEKKA 147
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK +TAY K
Sbjct: 148 AKLKEKYEKDITAYRNK 164
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFEAK 109
KDP KP+ S++ F++ R+ +K++HP S K E+WK+++ EK FE
Sbjct: 3 KDPRKPRGKMSSYAYFVQTCREEHKKKHPEASVNFSEFSKKCSERWKTMSAKEKGKFEDL 62
Query: 110 AAKRKLDYEKLMTAY 124
A K+ YE+ M +Y
Sbjct: 63 AKLDKVRYEREMRSY 77
>gi|213513415|ref|NP_001133101.1| high mobility group protein B1 [Salmo salar]
gi|197631937|gb|ACH70692.1| high-mobility group box 1 [Salmo salar]
Length = 203
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 50/77 (64%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRP SAFF+F +FR K E P + ++ V K GEKW +LT +K P+E KA
Sbjct: 89 KDPNAPKRPSSAFFIFCADFRPQVKGETPGL-SIGDVAKKLGEKWNNLTAEDKVPYEKKA 147
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK +TAY K
Sbjct: 148 AKLKEKYEKDITAYRNK 164
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFEAK 109
KDP KP+ S++ F++ R+ +K++HP S K E+W++++ EK FE
Sbjct: 3 KDPRKPRGKMSSYAYFVQTCREEHKKKHPEASVNFSEFSKKCSERWRTMSAKEKGKFEDL 62
Query: 110 AAKRKLDYEKLMTAY 124
A K+ YE+ M +Y
Sbjct: 63 AKLDKVRYEREMRSY 77
>gi|221221148|gb|ACM09235.1| High mobility group-T protein [Salmo salar]
Length = 203
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 50/77 (64%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRP SAFF+F +FR K E P + ++ V K GEKW +LT +K P+E KA
Sbjct: 89 KDPNAPKRPSSAFFIFCADFRPQVKGETPGL-SIGDVAKKLGEKWNNLTAEDKVPYEKKA 147
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK +TAY K
Sbjct: 148 AKLKEKYEKDITAYRNK 164
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFEAK 109
KDP KP+ S++ F++ R+ +K++HP S K E+W++++ EK FE
Sbjct: 3 KDPRKPRGKMSSYAYFVQTCREEHKKKHPEASVNFSEFSKKCSERWRTMSAKEKGKFEDL 62
Query: 110 AAKRKLDYEKLMTAY 124
A K+ YE+ M +Y
Sbjct: 63 AKLDKVRYEREMRSY 77
>gi|171848939|pdb|2YQI|A Chain A, Solution Structure Of The Second Hmg-Box Domain From High
Mobility Group Protein B3
Length = 81
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 54 NKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKR 113
N PKRPPS FF+F EFR K +P + ++ V K GE W +L D+EK P+ KAAK
Sbjct: 8 NAPKRPPSGFFLFCSEFRPKIKSTNPGI-SIGDVAKKLGEMWNNLNDSEKQPYITKAAKL 66
Query: 114 KLDYEKLMTAYNKK 127
K YEK + Y K
Sbjct: 67 KEKYEKDVADYKSK 80
>gi|427794389|gb|JAA62646.1| Putative dorsal switch protein 1, partial [Rhipicephalus
pulchellus]
Length = 604
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 41 KRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTD 100
KR V +D NKPKRP +AF +F+ +FRK + P V+A+ K GGE+W+S+++
Sbjct: 243 KREMAVYKPARDANKPKRPGTAFMLFMGDFRKEMAGKEPE-GGVAALAKLGGERWRSMSE 301
Query: 101 AEKAPFEAKAAKRKLDYEKLMTAYNKKQ 128
+K P+ + + K+ YE+ M Y +KQ
Sbjct: 302 EDKRPYVERQNEEKMKYEQNMEEYRRKQ 329
Score = 42.4 bits (98), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 37/69 (53%)
Query: 56 PKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKL 115
PKR +A+ F + +R+ K+ + + GK KW +++D +K PF + AA+ +
Sbjct: 181 PKRATTAYITFTQWYREEMKKSGRQIPRIGDFGKECAGKWNTMSDEDKQPFLSAAARDRE 240
Query: 116 DYEKLMTAY 124
Y++ M Y
Sbjct: 241 RYKREMAVY 249
>gi|221220042|gb|ACM08682.1| High mobility group-T protein [Salmo salar]
Length = 203
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 50/77 (64%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRP SAFF+F +FR K E P + ++ V K GEKW +LT +K P+E KA
Sbjct: 89 KDPNAPKRPSSAFFIFCADFRPQVKVETPGL-SIGDVAKKLGEKWNNLTAEDKVPYEKKA 147
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK +TAY K
Sbjct: 148 AKLKEKYEKDITAYRNK 164
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFEAK 109
KDP KP+ S++ F++ R+ +K++HP S K E+WK+++ EK FE
Sbjct: 3 KDPRKPRGKMSSYAYFVQTCREEHKKKHPEASVNFSEFSKKCSERWKTMSAKEKGKFEDL 62
Query: 110 AAKRKLDYEKLMTAY 124
A K+ YE+ M +Y
Sbjct: 63 AKLDKVRYEREMRSY 77
>gi|402875874|ref|XP_003901718.1| PREDICTED: high mobility group protein B2-like, partial [Papio
anubis]
Length = 248
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 53 PNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAK 112
PN PKRPPSAFF+F E R K EHP + ++ K GE W + +K P+E KAAK
Sbjct: 127 PNAPKRPPSAFFLFCSEHRPKIKSEHPGL-SIGDTAKKLGEMWSQQSAKDKQPYEQKAAK 185
Query: 113 RKLDYEKLMTAYNKK 127
K YEK + AY K
Sbjct: 186 LKEKYEKDIAAYRAK 200
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 44 KNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVK-AVSAVGKAGGEKWKSLTDAE 102
++V K DPNKP+ S++ F++ R+ +K++HP+ + K E+WK+++ E
Sbjct: 32 RSVTMGKGDPNKPRGKMSSYAFFVQTCREEHKEKHPDSSVGFAEFSKKCSERWKTMSAKE 91
Query: 103 KAPFEAKAAKRKLDYEKLMTAY 124
K+ FE A K+ Y++ M Y
Sbjct: 92 KSKFEGMAKSGKVRYDREMKNY 113
>gi|221221758|gb|ACM09540.1| High mobility group-T protein [Salmo salar]
Length = 203
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 50/77 (64%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRP SAFF+F +FR K E P + ++ V K GEKW +LT +K P+E KA
Sbjct: 89 KDPNAPKRPSSAFFIFCADFRPQVKVETPGL-SIGDVAKKLGEKWNNLTAEDKVPYEKKA 147
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK +TAY K
Sbjct: 148 AKLKEKYEKDITAYRNK 164
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFEAK 109
KDP KP+ S++ F++ R+ +K++HP S K E+W++++ EK FE
Sbjct: 3 KDPRKPRGKMSSYAYFVQTCREEHKKKHPEASVNFSEFSKKCSERWRTMSAKEKGKFEDL 62
Query: 110 AAKRKLDYEKLMTAY 124
A K+ YE+ M +Y
Sbjct: 63 AKLDKVRYEREMRSY 77
>gi|444729655|gb|ELW70064.1| High mobility group protein B1 [Tupaia chinensis]
Length = 161
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPP AFF+F E+ K+EHP++ ++ V K GE W + +K P+E KA
Sbjct: 90 KDPNVPKRPPLAFFLFCSEYHPKIKEEHPDL-SIGDVAKILGEMWNNTAADDKQPYE-KA 147
Query: 111 AKRKLDYEKLMTAY 124
AK K YEK + AY
Sbjct: 148 AKLKEKYEKDIAAY 161
>gi|427793709|gb|JAA62306.1| Putative dorsal switch protein 1, partial [Rhipicephalus
pulchellus]
Length = 640
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 55/92 (59%), Gaps = 1/92 (1%)
Query: 37 RSSNKRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWK 96
R KR V +D NKPKRP +AF +F+ +FRK + P V+A+ K GGE+W+
Sbjct: 275 RERYKREMAVYKPARDANKPKRPGTAFMLFMGDFRKEMAGKEPE-GGVAALAKLGGERWR 333
Query: 97 SLTDAEKAPFEAKAAKRKLDYEKLMTAYNKKQ 128
S+++ +K P+ + + K+ YE+ M Y +KQ
Sbjct: 334 SMSEEDKRPYVERQNEEKMKYEQNMEEYRRKQ 365
Score = 42.0 bits (97), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 37/69 (53%)
Query: 56 PKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKL 115
PKR +A+ F + +R+ K+ + + GK KW +++D +K PF + AA+ +
Sbjct: 217 PKRATTAYITFTQWYREEMKKSGRQIPRIGDFGKECAGKWNTMSDEDKQPFLSAAARDRE 276
Query: 116 DYEKLMTAY 124
Y++ M Y
Sbjct: 277 RYKREMAVY 285
>gi|344245608|gb|EGW01712.1| High mobility group protein B1 [Cricetulus griseus]
Length = 162
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F E+ K E P + ++ K GE W S +K P+E KA
Sbjct: 39 KDPNAPKRPPSAFFLFCSEYHPKIKGERPGL-SIGDAAKKLGETWNSTAAEDKQPYETKA 97
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + Y K
Sbjct: 98 AKLKEQYEKDIADYRAK 114
>gi|302411796|ref|XP_003003731.1| nucleosome binding protein [Verticillium albo-atrum VaMs.102]
gi|261357636|gb|EEY20064.1| nucleosome binding protein [Verticillium albo-atrum VaMs.102]
gi|346978438|gb|EGY21890.1| nucleosome binding protein [Verticillium dahliae VdLs.17]
Length = 102
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 44 KNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEK 103
K K AKKDPN PKR SA+ F E R+ ++E+P + + VGK GE+WK+L + ++
Sbjct: 13 KKAKRAKKDPNAPKRGLSAYMFFANEQRENVREENPGI-SFGQVGKLLGERWKALNEKQR 71
Query: 104 APFEAKAAKRKLDYEKLMTAYN 125
P+EAKA K YE AYN
Sbjct: 72 GPYEAKAVADKKRYEDEKAAYN 93
>gi|444730168|gb|ELW70558.1| High mobility group protein B3 [Tupaia chinensis]
Length = 369
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKRP S FF+F EFR K +P + ++ V K G+ W +L+D+EK P+ KAA
Sbjct: 89 DPNAPKRPLSGFFLFSSEFRPKIKSTNPGI-SIGDVAKKLGDMWNNLSDSEKQPYITKAA 147
Query: 112 KRKLDYEKLMTAYNKK 127
K K YEK + Y K
Sbjct: 148 KLKEKYEKDVANYKSK 163
>gi|361127235|gb|EHK99210.1| putative Non-histone chromosomal protein 6 [Glarea lozoyensis
74030]
Length = 100
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Query: 41 KRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTD 100
KR K + KKDPN PKR SA+ F E R+ ++E+P + + VGK GE+WK+L+D
Sbjct: 8 KRAKRTEKKKKDPNAPKRGLSAYMFFANEQRENVREENPGI-SFGQVGKVLGERWKALSD 66
Query: 101 AEKAPFEAKAAKRKLDYEKLMTAYN 125
++ P+ AKA K+ YE+ YN
Sbjct: 67 TQRKPYAAKADADKIRYEEEKANYN 91
>gi|351702997|gb|EHB05916.1| High mobility group protein B1 [Heterocephalus glaber]
Length = 204
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKR PS FF+F E+R K EHP + + V K GE W + +K P+E KA
Sbjct: 90 KDPNAPKRAPSTFFLFCSEYRPKIKGEHPGL-STGDVAKKLGEMWNNTAAGDKQPYEKKA 148
Query: 111 AKRKLDYEKLMTAYNKK 127
A+ K YEK + AY K
Sbjct: 149 AELKEKYEKDIAAYRAK 165
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFEA 108
K DP KP+ S++ F++ R+ +K++H + S K E+WK+++ EK FE
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHSDASVKFSEYSKKCSERWKTMSAKEKGTFED 62
Query: 109 KAAKRKLDYEKLMTAY 124
A K YE+ M Y
Sbjct: 63 MAKVDKARYERKMKTY 78
>gi|335892928|gb|AEH59759.1| high mobility group box 1 [Lethenteron camtschaticum]
Length = 208
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
KKDPN PKRPPSAFF++ E+R + E+P + + ++ K GE W + EK+ +E K
Sbjct: 90 KKDPNAPKRPPSAFFIYCAEYRSKVRAENPGL-TIGSIAKKLGEMWNNAPADEKSIYERK 148
Query: 110 AAKRKLDYEKLMTAYNKK 127
AK K Y+K M +Y K
Sbjct: 149 TAKLKEKYDKDMASYRSK 166
>gi|1419611|emb|CAA67363.1| HMG [Lampetra fluviatilis]
Length = 208
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
KKDPN PKRPPSAFF++ E+R + E+P + + ++ K GE W + EK+ +E K
Sbjct: 90 KKDPNAPKRPPSAFFIYCAEYRSKVRAENPGL-TIGSIAKKLGEMWNNAPADEKSIYERK 148
Query: 110 AAKRKLDYEKLMTAYNKK 127
AK K Y+K M +Y K
Sbjct: 149 TAKLKEKYDKDMASYRSK 166
>gi|444729656|gb|ELW70065.1| High mobility group protein B1 [Tupaia chinensis]
Length = 161
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPP AFF+F E+ K+EHP++ ++ V K GE W + +K P+E KA
Sbjct: 90 KDPNVPKRPPLAFFLFCSEYHPKIKEEHPDL-SIGDVAKKLGEMWNNTAADDKQPYE-KA 147
Query: 111 AKRKLDYEKLMTAY 124
AK K YEK + AY
Sbjct: 148 AKLKEKYEKDIAAY 161
>gi|351698285|gb|EHB01204.1| High mobility group protein B1 [Heterocephalus glaber]
Length = 215
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F E+R K EHP + ++ V K GE W + +K P+E KA
Sbjct: 90 KDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKA 148
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK +TAY K
Sbjct: 149 AKLKEKYEKDITAYRAK 165
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DP KP+ S++ F++ + +K++HP+ S K G E+WK+++ EK FE
Sbjct: 2 GKGDPKKPRGKMSSYAFFVQTCGEDHKKKHPDASVNFSEFSKKGSERWKTISAEEKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K YE+ M Y
Sbjct: 62 DMAKADKARYEREMKTY 78
>gi|239606992|gb|EEQ83979.1| nucleosome binding protein [Ajellomyces dermatitidis ER-3]
Length = 105
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
KKDPN PKR SA+ F E R ++E+P + + VGK GE+WK+L + ++AP+EAK
Sbjct: 18 KKDPNAPKRGLSAYMFFANEQRDNVREENPGI-SFGQVGKVLGERWKALNEKQRAPYEAK 76
Query: 110 AAKRKLDYEKLMTAYN 125
AA K YE +YN
Sbjct: 77 AAADKKRYEDEKASYN 92
>gi|225709792|gb|ACO10742.1| High mobility group protein B2 [Caligus rogercresseyi]
Length = 215
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 52/94 (55%), Gaps = 8/94 (8%)
Query: 34 KASRSSNKRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGE 93
K S+++ KR KKDPN PKRPPSAFFVF E R K ++P + + + K G
Sbjct: 82 KGSKAAGKR-------KKDPNAPKRPPSAFFVFCAEHRGRIKADNPGM-GIGDIAKQLGL 133
Query: 94 KWKSLTDAEKAPFEAKAAKRKLDYEKLMTAYNKK 127
W T +K P EAKA K K YEK + AY K
Sbjct: 134 LWGKQTPKDKLPHEAKATKLKEKYEKDVAAYKAK 167
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFEAK 109
KDPNKPK S++ F+ R+ +K++HP S K E+W++++ EK FE
Sbjct: 4 KDPNKPKGKTSSYAFFVATCREEHKKKHPGTSVNFSEFSKKCSERWRTMSAKEKVKFEDM 63
Query: 110 AAKRKLDYEKLMTAY 124
A K+ Y+K M Y
Sbjct: 64 AKGDKVRYDKDMKGY 78
>gi|427780835|gb|JAA55869.1| Putative dorsal switch protein 1 [Rhipicephalus pulchellus]
Length = 508
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 41 KRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTD 100
KR V +D NKPKRP +AF +F+ +FRK + P V+A+ K GGE+W+S+++
Sbjct: 243 KREMAVYKPARDANKPKRPGTAFMLFMGDFRKEMAGKEPE-GGVAALAKLGGERWRSMSE 301
Query: 101 AEKAPFEAKAAKRKLDYEKLMTAYNKKQ 128
+K P+ + + K+ YE+ M Y +KQ
Sbjct: 302 EDKRPYVERQNEEKMKYEQNMEEYRRKQ 329
Score = 41.6 bits (96), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 37/69 (53%)
Query: 56 PKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKL 115
PKR +A+ F + +R+ K+ + + GK KW +++D +K PF + AA+ +
Sbjct: 181 PKRATTAYITFTQWYREEMKKSGRQIPRIGDFGKECAGKWNTMSDEDKQPFLSAAARDRE 240
Query: 116 DYEKLMTAY 124
Y++ M Y
Sbjct: 241 RYKREMAVY 249
>gi|332847763|ref|XP_003315517.1| PREDICTED: putative high mobility group protein B3-like
protein-like [Pan troglodytes]
gi|397485725|ref|XP_003813991.1| PREDICTED: putative high mobility group protein B3-like
protein-like [Pan paniscus]
Length = 207
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
KKDPN PKRPPS FF+F EF K +P + + V K E WK+L D+EK P+ +
Sbjct: 86 KKDPNAPKRPPSGFFLFCSEFCPKSKSTNPGI-PIGDVAKKLSEMWKNLNDSEKQPYITQ 144
Query: 110 AAKRKLDYEK 119
AAK K YEK
Sbjct: 145 AAKLKEKYEK 154
>gi|427793707|gb|JAA62305.1| Putative dorsal switch protein 1, partial [Rhipicephalus
pulchellus]
Length = 529
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 41 KRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTD 100
KR V +D NKPKRP +AF +F+ +FRK + P V+A+ K GGE+W+S+++
Sbjct: 264 KREMAVYKPARDANKPKRPGTAFMLFMGDFRKEMAGKEPE-GGVAALAKLGGERWRSMSE 322
Query: 101 AEKAPFEAKAAKRKLDYEKLMTAYNKKQ 128
+K P+ + + K+ YE+ M Y +KQ
Sbjct: 323 EDKRPYVERQNEEKMKYEQNMEEYRRKQ 350
Score = 41.6 bits (96), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 37/69 (53%)
Query: 56 PKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKL 115
PKR +A+ F + +R+ K+ + + GK KW +++D +K PF + AA+ +
Sbjct: 202 PKRATTAYITFTQWYREEMKKSGRQIPRIGDFGKECAGKWNTMSDEDKQPFLSAAARDRE 261
Query: 116 DYEKLMTAY 124
Y++ M Y
Sbjct: 262 RYKREMAVY 270
>gi|356510782|ref|XP_003524113.1| PREDICTED: high mobility group B protein 14-like [Glycine max]
Length = 165
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 57/94 (60%)
Query: 34 KASRSSNKRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGE 93
++ + +N R K K D K K+P S FF FLE+FRK ++ +P+VK+ +GKA +
Sbjct: 45 RSVQQTNSRKKLKAKQKFDAMKQKKPLSGFFYFLEDFRKEFQVRNPDVKSKRDIGKASAK 104
Query: 94 KWKSLTDAEKAPFEAKAAKRKLDYEKLMTAYNKK 127
KWK++T EKA + A K+ +++ M +NKK
Sbjct: 105 KWKTMTYEEKAQYFDIATKKHDEFDSAMAEFNKK 138
>gi|226372550|gb|ACO51900.1| High mobility group protein B2 [Rana catesbeiana]
Length = 212
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKRPPSAFF+F E R K + P + ++ K GE W T +K PFE KAA
Sbjct: 92 DPNAPKRPPSAFFLFCSENRPQIKNDTPGL-SIGDTAKKLGELWSEQTPKDKQPFEQKAA 150
Query: 112 KRKLDYEKLMTAYNKK 127
K K YEK + AY K
Sbjct: 151 KLKEKYEKDVAAYRAK 166
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVK-AVSAVGKAGGEKWKSLTDAEKAPFE 107
K DPNKP+ S++ F++ R+ +K++HP+ + + K E+WK+++ K FE
Sbjct: 2 GKGDPNKPRGKMSSYAYFVQTCREEHKKKHPDSSVSFAEFSKKCSERWKTMSAKGKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K+ YE+ M Y
Sbjct: 62 DLAKGDKVRYEREMKTY 78
>gi|301763549|ref|XP_002917185.1| PREDICTED: high mobility group protein B4-like [Ailuropoda
melanoleuca]
Length = 193
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DP P+RPPS+F +F ++ K+E+PN V V KA G+ W + TDAEK P+E +AA
Sbjct: 91 DPQAPRRPPSSFLLFCQDHYAQLKRENPNWSVVQ-VAKASGKMWSATTDAEKQPYEQRAA 149
Query: 112 KRKLDYEKLMTAYNKK 127
+ Y++ + Y K+
Sbjct: 150 LLRAKYQEELEIYRKQ 165
Score = 40.0 bits (92), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 55 KPKRPPSAFFVFLEEFRKVYKQEHPNVK-AVSAVGKAGGEKWKSLTDAEKAPFEAKAAKR 113
+PK S++ FL +R +K++ PN + EKW+S++ EKA +EA A
Sbjct: 10 RPKVNVSSYIHFLLNYRNKFKEQQPNTYLGFKEFSRKCSEKWRSISKHEKAKYEALAKLD 69
Query: 114 KLDYEKLMTAY 124
K Y++ M Y
Sbjct: 70 KARYQEEMMNY 80
>gi|261194046|ref|XP_002623428.1| nucleosome binding protein [Ajellomyces dermatitidis SLH14081]
gi|239588442|gb|EEQ71085.1| nucleosome binding protein [Ajellomyces dermatitidis SLH14081]
gi|327354542|gb|EGE83399.1| nonhistone chromosomal protein 6A [Ajellomyces dermatitidis ATCC
18188]
Length = 101
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
KKDPN PKR SA+ F E R ++E+P + + VGK GE+WK+L + ++AP+EAK
Sbjct: 18 KKDPNAPKRGLSAYMFFANEQRDNVREENPGI-SFGQVGKVLGERWKALNEKQRAPYEAK 76
Query: 110 AAKRKLDYEKLMTAYN 125
AA K YE +YN
Sbjct: 77 AAADKKRYEDEKASYN 92
>gi|62638360|ref|XP_574279.1| PREDICTED: high mobility group protein B2-like [Rattus norvegicus]
gi|109460525|ref|XP_001074365.1| PREDICTED: high mobility group protein B2-like [Rattus norvegicus]
Length = 209
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 54 NKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKR 113
N PKRPPSAFF+F E R K EHP + ++ K GE W + +K P+E KAAK
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGL-SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 151
Query: 114 KLDYEKLMTAYNKK 127
K +YEK + AY K
Sbjct: 152 KEEYEKDIAAYRAK 165
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DPNKP+ S++ F++ R+ +K +HP+ + K E+WK+++ EK+ FE
Sbjct: 2 GKGDPNKPRGKMSSYAFFVQTCREEHKNKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K Y++ M Y
Sbjct: 62 DLAKSDKARYDREMKNY 78
>gi|334348387|ref|XP_003342057.1| PREDICTED: LOW QUALITY PROTEIN: high mobility group protein B3
[Monodelphis domestica]
Length = 208
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KD N PK PPS FF+F EFR K +P + ++ V K GE W +L+D EK P+ KA
Sbjct: 88 KDSNAPKHPPSGFFLFCSEFRPKIKSTNPGI-SIGDVAKKLGEMWNNLSDNEKQPYNNKA 146
Query: 111 AKRKLDYEK 119
AK K YEK
Sbjct: 147 AKLKEKYEK 155
>gi|71027705|ref|XP_763496.1| hypothetical protein [Theileria parva strain Muguga]
gi|68350449|gb|EAN31213.1| high mobility group protein, putative [Theileria parva]
Length = 94
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 59/94 (62%), Gaps = 4/94 (4%)
Query: 34 KASRSSNKRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNV-KAVSAVGKAGG 92
K S+S+ K++K AKKDPN PKR S++ F +E R +E+P++ + V+AVGK G
Sbjct: 4 KVSKSAGKKSKR---AKKDPNAPKRALSSYMFFAKEKRAELVRENPDLARDVAAVGKLVG 60
Query: 93 EKWKSLTDAEKAPFEAKAAKRKLDYEKLMTAYNK 126
W SL ++EKAP+E A + YEK AYNK
Sbjct: 61 AAWNSLDESEKAPYEKLAEADRARYEKEKAAYNK 94
>gi|410256408|gb|JAA16171.1| high mobility group box 3 [Pan troglodytes]
Length = 213
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DP+ PKRPPS FF+F E R K +P + +V V K GE W +L D+EK P+ KAA
Sbjct: 89 DPSAPKRPPSGFFLFSSEIRPKIKSTNPGI-SVGDVAKKLGEMWNNLNDSEKQPYITKAA 147
Query: 112 KRKLDYEKLMTAYNKK 127
K K YEK + Y K
Sbjct: 148 KLKEKYEKDVADYKSK 163
>gi|320585897|gb|EFW98576.1| nucleosome-binding protein [Grosmannia clavigera kw1407]
Length = 94
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Query: 47 KSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPF 106
+ +KKDPN PKR SA+ F E R+ + E+P + + VGK GE+WK+L + ++ P+
Sbjct: 16 RRSKKDPNAPKRGLSAYMFFANEQRENVRDENPGI-SFGQVGKILGERWKALNEKQRTPY 74
Query: 107 EAKAAKRKLDYEKLMTAYN 125
EAKAA K YE AYN
Sbjct: 75 EAKAAADKKRYEDAKAAYN 93
>gi|357517687|ref|XP_003629132.1| HMG1/2-like protein [Medicago truncatula]
gi|355523154|gb|AET03608.1| HMG1/2-like protein [Medicago truncatula]
Length = 75
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/44 (65%), Positives = 37/44 (84%)
Query: 44 KNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAV 87
K K A KDPNKPKRPPSAFFVF+ +FR+ YK++HPN K+V+A+
Sbjct: 25 KQTKKAAKDPNKPKRPPSAFFVFMSDFREQYKKDHPNNKSVAAL 68
>gi|115459940|ref|NP_001053570.1| Os04g0564600 [Oryza sativa Japonica Group]
gi|38345400|emb|CAE03091.2| OSJNBa0017B10.6 [Oryza sativa Japonica Group]
gi|113565141|dbj|BAF15484.1| Os04g0564600 [Oryza sativa Japonica Group]
gi|116309704|emb|CAH66751.1| H0409D10.9 [Oryza sativa Indica Group]
gi|116309707|emb|CAH66753.1| OSIGBa0158F05.2 [Oryza sativa Indica Group]
gi|125549359|gb|EAY95181.1| hypothetical protein OsI_16998 [Oryza sativa Indica Group]
gi|149391231|gb|ABR25633.1| hmg1/2-like protein [Oryza sativa Indica Group]
gi|213959192|gb|ACJ54930.1| HMG protein [Oryza sativa Japonica Group]
gi|215767864|dbj|BAH00093.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222629376|gb|EEE61508.1| hypothetical protein OsJ_15798 [Oryza sativa Japonica Group]
gi|323388963|gb|ADX60286.1| HMG transcription factor [Oryza sativa Japonica Group]
Length = 132
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 39/56 (69%)
Query: 54 NKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
KPKR + FF FL EFR Y ++HPN K V+AV KA GEKW++++D EKA + K
Sbjct: 23 GKPKRGLTPFFAFLAEFRPQYMEKHPNTKGVAAVTKAAGEKWRAMSDEEKAQYGGK 78
>gi|444730527|gb|ELW70909.1| High mobility group protein B1 [Tupaia chinensis]
Length = 238
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPP AFF+F E+R + EHP + ++ K GE W + +K P+E +A
Sbjct: 90 KDPNAPKRPPLAFFLFCSEYRPKIEGEHPGL-SIGDTAKKLGELWNNTAANDKQPYEKEA 148
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + AY K
Sbjct: 149 AKLKEKYEKDIAAYRAK 165
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DP KP+ S++ F++ + +K++HP+ S K E+WK+++ EK FE
Sbjct: 2 GKGDPKKPRGKMSSYAFFVQTCWEEHKKKHPDASVNFSEFSKKCSERWKAMSAKEKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K YE+ M Y
Sbjct: 62 DMAKVDKTRYEREMKTY 78
>gi|5815432|gb|AAD52670.1|AF178849_1 high mobility group protein HMG1 [Gallus gallus]
Length = 214
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F EFR K EHP + ++ V K GE W + +K P+E KA
Sbjct: 90 KDPNAPKRPPSAFFLFCSEFRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKA 148
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + AY K
Sbjct: 149 AKLKEKYEKDIAAYRAK 165
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DP KP+ S++ F++ R+ +K++HP+ S K E+WK+++ EK FE
Sbjct: 2 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSSKEKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A KL YEK M Y
Sbjct: 62 DMAKADKLRYEKEMKNY 78
>gi|380083124|gb|AFD33645.1| high mobility group box 1, partial [Gallus gallus]
Length = 185
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F EFR K EHP + ++ V K GE W + +K P+E KA
Sbjct: 90 KDPNAPKRPPSAFFLFCSEFRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKA 148
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + AY K
Sbjct: 149 AKLKEKYEKDIAAYRAK 165
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DP KP+ S++ F++ R+ +K++HP+ S K E+WK+++ EK FE
Sbjct: 2 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSSKEKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A KL YEK M Y
Sbjct: 62 DMAKADKLRYEKEMKNY 78
>gi|45382473|ref|NP_990233.1| high mobility group protein B1 [Gallus gallus]
gi|326914268|ref|XP_003203448.1| PREDICTED: high mobility group protein B1-like [Meleagris
gallopavo]
gi|4140289|emb|CAA76978.1| high mobility group 1 protein [Gallus gallus]
gi|60098903|emb|CAH65282.1| hypothetical protein RCJMB04_15a21 [Gallus gallus]
Length = 215
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F EFR K EHP + ++ V K GE W + +K P+E KA
Sbjct: 90 KDPNAPKRPPSAFFLFCSEFRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKA 148
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + AY K
Sbjct: 149 AKLKEKYEKDIAAYRAK 165
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DP KP+ S++ F++ R+ +K++HP+ S K E+WK+++ EK FE
Sbjct: 2 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSSKEKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A KL YEK M Y
Sbjct: 62 DMAKADKLRYEKEMKNY 78
>gi|281349442|gb|EFB25026.1| hypothetical protein PANDA_005395 [Ailuropoda melanoleuca]
Length = 181
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DP P+RPPS+F +F ++ K+E+PN V V KA G+ W + TDAEK P+E +AA
Sbjct: 89 DPQAPRRPPSSFLLFCQDHYAQLKRENPNWSVVQ-VAKASGKMWSATTDAEKQPYEQRAA 147
Query: 112 KRKLDYEKLMTAYNKK 127
+ Y++ + Y K+
Sbjct: 148 LLRAKYQEELEIYRKQ 163
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 55 KPKRPPSAFFVFLEEFRKVYKQEHPNVK-AVSAVGKAGGEKWKSLTDAEKAPFEAKAAKR 113
+PK S++ FL +R +K++ PN + EKW+S++ EKA +EA A
Sbjct: 8 RPKVNVSSYIHFLLNYRNKFKEQQPNTYLGFKEFSRKCSEKWRSISKHEKAKYEALAKLD 67
Query: 114 KLDYEKLMTAY 124
K Y++ M Y
Sbjct: 68 KARYQEEMMNY 78
>gi|224043266|ref|XP_002194652.1| PREDICTED: high mobility group protein B1 [Taeniopygia guttata]
Length = 215
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F EFR K EHP + ++ V K GE W + +K P+E KA
Sbjct: 90 KDPNAPKRPPSAFFLFCSEFRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKA 148
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + AY K
Sbjct: 149 AKLKEKYEKDIAAYRAK 165
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DP KP+ S++ F++ R+ +K++HP+ S K E+WK+++ EK FE
Sbjct: 2 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSSKEKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A KL YEK M Y
Sbjct: 62 DMAKADKLRYEKEMKNY 78
>gi|213959194|gb|ACJ54931.1| HMG protein [Oryza sativa Japonica Group]
Length = 131
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 39/56 (69%)
Query: 54 NKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
KPKR + FF FL EFR Y ++HPN K V+AV KA GEKW++++D EKA + K
Sbjct: 23 GKPKRGLTPFFAFLAEFRPQYMEKHPNTKGVAAVTKAAGEKWRAMSDEEKAQYGGK 78
>gi|344248925|gb|EGW05029.1| hypothetical protein I79_015964 [Cricetulus griseus]
Length = 164
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 46/74 (62%), Gaps = 2/74 (2%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAF +F E+R K EHP + ++ V K GE W + +K P+E KA
Sbjct: 40 KDPNAPKRPPSAF-LFCSEYRPKTKGEHPGL-SLGDVAKKLGEMWNNTAAGDKQPYEKKA 97
Query: 111 AKRKLDYEKLMTAY 124
AK K YEK + AY
Sbjct: 98 AKLKEQYEKDIAAY 111
>gi|452839855|gb|EME41794.1| hypothetical protein DOTSEDRAFT_74007 [Dothistroma septosporum
NZE10]
Length = 108
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 57/98 (58%), Gaps = 2/98 (2%)
Query: 28 KRKAVLKASRSSNKRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAV 87
K KA + S+ + ++ K KKDPN PKR SA+ F E R + ++P +K V
Sbjct: 3 KEKATTRGSKKAVDKSAGGKK-KKDPNMPKRGLSAYMFFANEQRDKVRDDNPGIK-FGEV 60
Query: 88 GKAGGEKWKSLTDAEKAPFEAKAAKRKLDYEKLMTAYN 125
GK GEKWK L++ +KAP+EAKAA K YE+ AY
Sbjct: 61 GKQLGEKWKGLSEKQKAPYEAKAAADKKRYEEEKAAYT 98
>gi|397475678|ref|XP_003809257.1| PREDICTED: high mobility group protein B3-like [Pan paniscus]
Length = 165
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DP+ PKRPPS FF+F E R K +P + +V V K GE W +L D+EK P+ KAA
Sbjct: 66 DPSAPKRPPSGFFLFSSEIRPKIKSTNPGI-SVGDVAKKLGEMWNNLNDSEKQPYITKAA 124
Query: 112 KRKLDYEK 119
K K YEK
Sbjct: 125 KLKEKYEK 132
>gi|354470970|ref|XP_003497717.1| PREDICTED: high mobility group protein B1-like [Cricetulus griseus]
Length = 215
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F E+ K EHP + ++ V K GE W + +K P+ KA
Sbjct: 90 KDPNAPKRPPSAFFLFCSEYCPKIKGEHPGL-SIGDVAKKLGELWNNTAAEDKQPYGKKA 148
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K +EK + AY K
Sbjct: 149 AKLKEKHEKGIAAYRAK 165
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DP KP+ S++ F++ R+ +K++HP+ S K E+WK+++ EK FE
Sbjct: 2 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKRKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K YE+ M Y
Sbjct: 62 DMAKADKARYEREMKTY 78
>gi|351705938|gb|EHB08857.1| High mobility group protein B1 [Heterocephalus glaber]
Length = 176
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPS FF+F E+ K EHP + ++ V K E W + +K P+E KA
Sbjct: 28 KDPNAPKRPPSTFFLFCSEYCPKIKGEHPGL-SIGDVAKKLEEMWNNAAADDKQPYEKKA 86
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K +YEK + AY K
Sbjct: 87 AKLKENYEKDIAAYRAK 103
>gi|344237192|gb|EGV93295.1| High mobility group protein B1 [Cricetulus griseus]
Length = 203
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F E+ K EHP + ++ V K GE W + +K P+ KA
Sbjct: 78 KDPNAPKRPPSAFFLFCSEYCPKIKGEHPGL-SIGDVAKKLGELWNNTAAEDKQPYGKKA 136
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K +EK + AY K
Sbjct: 137 AKLKEKHEKGIAAYRAK 153
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 61 SAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKLDYEK 119
S++ F++ R+ +K++HP+ S K E+WK+++ EK FE A K YE+
Sbjct: 2 SSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKRKFEDMAKADKARYER 61
Query: 120 LMTAY 124
M Y
Sbjct: 62 EMKTY 66
>gi|119187239|ref|XP_001244226.1| hypothetical protein CIMG_03667 [Coccidioides immitis RS]
gi|303317166|ref|XP_003068585.1| Nonhistone chromosomal protein 6B, putative [Coccidioides posadasii
C735 delta SOWgp]
gi|240108266|gb|EER26440.1| Nonhistone chromosomal protein 6B, putative [Coccidioides posadasii
C735 delta SOWgp]
gi|320038503|gb|EFW20438.1| nucleosome binding protein Nhp6a [Coccidioides posadasii str.
Silveira]
gi|392870942|gb|EAS32789.2| non-histone chromosomal protein 6 [Coccidioides immitis RS]
Length = 102
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
KKDPN PKR SA+ F E R+ ++E+P + + VGK GE+WK+L+D ++AP+E K
Sbjct: 19 KKDPNAPKRGLSAYMFFANEQRENVREENPGI-SFGQVGKLLGERWKALSDKQRAPYEEK 77
Query: 110 AAKRKLDYEKLMTAYN 125
AA K YE YN
Sbjct: 78 AAADKKRYEDEKANYN 93
>gi|196005089|ref|XP_002112411.1| hypothetical protein TRIADDRAFT_56397 [Trichoplax adhaerens]
gi|190584452|gb|EDV24521.1| hypothetical protein TRIADDRAFT_56397 [Trichoplax adhaerens]
Length = 253
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
K DP+KPKRP +A+F FL EFRK K + V + GEKW+++T AEKA +EA
Sbjct: 133 KADPDKPKRPQTAYFYFLAEFRKAMKAK--GVIEGKKLTSLSGEKWRAMTPAEKAKYEAM 190
Query: 110 AAKRKLDYEKLMTAYNKKQ 128
K K Y++ M AY KK+
Sbjct: 191 VTKDKERYQREMDAYRKKK 209
Score = 37.4 bits (85), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 38/71 (53%)
Query: 57 KRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKLD 116
K+P SA+ F R+ K+ + + K G +W+++T ++K P++ AA+ K
Sbjct: 63 KKPKSAYIFFTTSLRQRLKKSGREMPKAHEIAKMCGSEWRAMTASQKKPYDELAARDKQR 122
Query: 117 YEKLMTAYNKK 127
Y + ++ + KK
Sbjct: 123 YMEEISKFRKK 133
>gi|366988547|ref|XP_003674040.1| hypothetical protein NCAS_0A11010 [Naumovozyma castellii CBS 4309]
gi|342299903|emb|CCC67659.1| hypothetical protein NCAS_0A11010 [Naumovozyma castellii CBS 4309]
Length = 101
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
KKDPN PKR SA+ F E R + K E+PN+ VGK GEKWK+LT EK P+EAK
Sbjct: 14 KKDPNAPKRGLSAYMFFANENRDIVKAENPNI-TFGQVGKVLGEKWKALTAEEKEPYEAK 72
Query: 110 AAKRKLDYE 118
A K YE
Sbjct: 73 AKADKKRYE 81
>gi|395850201|ref|XP_003797684.1| PREDICTED: high mobility group protein B1 [Otolemur garnettii]
Length = 289
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F E+R K EHP + ++ V K GE W + +K P+E KA
Sbjct: 90 KDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKA 148
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + AY K
Sbjct: 149 AKLKEKYEKDIAAYRAK 165
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DP KP+ S++ F++ R+ +K++HP+ S K E+WK+++ EK FE
Sbjct: 2 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K YE+ M Y
Sbjct: 62 DMAKADKARYEREMKTY 78
>gi|366998295|ref|XP_003683884.1| hypothetical protein TPHA_0A03740 [Tetrapisispora phaffii CBS 4417]
gi|357522179|emb|CCE61450.1| hypothetical protein TPHA_0A03740 [Tetrapisispora phaffii CBS 4417]
Length = 93
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKR SA+ F E R + K E+P+V + VG+ GEKWK+LT EK PFEAKA
Sbjct: 17 DPNAPKRALSAYMFFANETRDIVKAENPDV-SFGQVGRILGEKWKALTAEEKIPFEAKAE 75
Query: 112 KRKLDYEKLMTAYN 125
K YE YN
Sbjct: 76 ADKKRYESEKALYN 89
>gi|50548527|ref|XP_501733.1| YALI0C11671p [Yarrowia lipolytica]
gi|74635076|sp|Q6CC79.1|NHP6_YARLI RecName: Full=Non-histone chromosomal protein 6
gi|49647600|emb|CAG82043.1| YALI0C11671p [Yarrowia lipolytica CLIB122]
Length = 103
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKR SA+ F + R + ++P + A VGKA GEKWK+LTDAEK P+E KA
Sbjct: 21 DPNAPKRALSAYMFFANDNRDAIRADNPGI-AFGQVGKALGEKWKTLTDAEKVPYEEKAT 79
Query: 112 KRKLDYEKLMTAY 124
K YE AY
Sbjct: 80 ADKKRYEDEKAAY 92
>gi|344252855|gb|EGW08959.1| TRAF family member-associated NF-kappa-B activator [Cricetulus
griseus]
Length = 427
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 55/94 (58%), Gaps = 8/94 (8%)
Query: 41 KRTKNVKSAK-------KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGE 93
KR +N+ K KDPN PKRPPSAFF+F E+R +K EHP + ++ V K GE
Sbjct: 286 KRNENLHPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKFKGEHPGL-SIGDVAKKLGE 344
Query: 94 KWKSLTDAEKAPFEAKAAKRKLDYEKLMTAYNKK 127
W + +K P+E KAAK K +EK + AY K
Sbjct: 345 MWNNTAADDKQPYEKKAAKLKEKHEKDIAAYRAK 378
>gi|322517988|gb|ADX06860.1| high mobility group protein B1 [Sciaenops ocellatus]
Length = 206
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F EFR K E P + + V K GE W +K PFE KA
Sbjct: 89 KDPNAPKRPPSAFFIFCSEFRPKVKGEAPGL-TIGEVAKRLGEMWNGTASEDKQPFEKKA 147
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + AY +K
Sbjct: 148 AKLKEKYEKEVAAYRQK 164
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFEAK 109
K+ KP+ S++ F++ R+ +K++HP+ + K +WK+++ EK FE
Sbjct: 3 KEQGKPRGKMSSYAYFVQTCREEHKKKHPDASVNFAEFSKKCSGRWKTMSSKEKGKFEDL 62
Query: 110 AAKRKLDYEKLMTAY 124
A + K YE+ M +Y
Sbjct: 63 ARQDKARYEREMMSY 77
>gi|402077455|gb|EJT72804.1| non-histone chromosomal protein 6 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 101
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEA 108
KKDP PKR SA+ F E R+ ++E+P V + VGK GE+WK+L+D ++AP++A
Sbjct: 17 GKKDPLAPKRGLSAYMFFANEQRENVREENPGV-SFGQVGKILGERWKALSDKQRAPYDA 75
Query: 109 KAAKRKLDYEKLMTAYN 125
KAA K YE AYN
Sbjct: 76 KAAADKKRYEDEKAAYN 92
>gi|403217000|emb|CCK71495.1| hypothetical protein KNAG_0H00800 [Kazachstania naganishii CBS
8797]
Length = 118
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 44 KNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEK 103
K V KKDPN PKR SA+ F E R + K E+PN +GK GEKWK+++ +K
Sbjct: 33 KRVTRKKKDPNAPKRSMSAYMFFANENRDIVKSENPNA-TFGQLGKLLGEKWKNMSTEDK 91
Query: 104 APFEAKAAKRKLDYEKLMTAYN 125
P++AKAA K YE YN
Sbjct: 92 EPYDAKAAADKKRYESEKELYN 113
>gi|335892930|gb|AEH59760.1| high mobility group box 2 [Lethenteron camtschaticum]
Length = 194
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFFVF E R K +HP + + + K GE W LT K+P+E KA
Sbjct: 88 KDPNAPKRPPSAFFVFCSEHRPKVKADHPGL-GIGEIAKRLGEMWGLLTPETKSPYEKKA 146
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + AY K
Sbjct: 147 AKLKEKYEKDVAAYRGK 163
Score = 38.9 bits (89), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K +P KP+ S++ F++ R+ +K++HP + K E+WK+++ EKA FE
Sbjct: 2 GKGEPGKPRGKMSSYAYFVQTCREEHKKKHPEASVNFAEFSKKCSERWKTMSPKEKARFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K Y++ M Y
Sbjct: 62 EMAKADKARYDREMKNY 78
>gi|403295709|ref|XP_003938773.1| PREDICTED: high mobility group protein B2 [Saimiri boliviensis
boliviensis]
Length = 158
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 54 NKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKR 113
N PKRPPSAFF+F E R K EHP + ++ K GE W + +K P+E KAAK
Sbjct: 42 NAPKRPPSAFFLFCSEHRPKIKSEHPGL-SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 100
Query: 114 KLDYEKLMTAYNKK 127
K YEK + AY K
Sbjct: 101 KEKYEKDIAAYRAK 114
>gi|109076196|ref|XP_001085665.1| PREDICTED: high mobility group protein B2-like [Macaca mulatta]
Length = 321
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 54 NKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKR 113
N PKRPPSAFF+F E R K EHP + ++ K GE W + +K P+E KAAK
Sbjct: 207 NAPKRPPSAFFLFCSEHRPKIKSEHPGL-SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 265
Query: 114 KLDYEKLMTAYNKK 127
K YEK + AY K
Sbjct: 266 KEKYEKDIAAYRAK 279
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
++ DPNKP+ S++ F++ R+ +K++HP+ + K E+WK+++ EK+ FE
Sbjct: 116 SRGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFE 175
Query: 108 AKAAKRKLDYEKLMTAY 124
A K Y++ M Y
Sbjct: 176 DMAKSDKARYDREMKNY 192
>gi|156843619|ref|XP_001644876.1| hypothetical protein Kpol_1065p34 [Vanderwaltozyma polyspora DSM
70294]
gi|156115528|gb|EDO17018.1| hypothetical protein Kpol_1065p34 [Vanderwaltozyma polyspora DSM
70294]
Length = 93
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKR SA+ F E R + K E+P+V + VG+ GEKWK++TD +K PF+AKA
Sbjct: 17 DPNAPKRALSAYMFFANETRDIVKAENPDV-SFGQVGRILGEKWKAMTDEDKQPFDAKAE 75
Query: 112 KRKLDYEKLMTAYN 125
K YE YN
Sbjct: 76 ADKKRYESEKELYN 89
>gi|32335|emb|CAA78938.1| HMG2B [Homo sapiens]
Length = 186
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 54 NKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKR 113
N PKRPPSAFF+F E R K EHP + ++ K GE W + +K P+E KAAK
Sbjct: 70 NAPKRPPSAFFLFCSEHRPKIKSEHPGL-SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 128
Query: 114 KLDYEKLMTAYNKK 127
K YEK + AY K
Sbjct: 129 KEKYEKDIAAYGAK 142
>gi|169409528|gb|ACA57879.1| High mobility group protein B3 (predicted) [Callicebus moloch]
Length = 193
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKRPPS FF+F EFR K + + ++ V K GE W +L D++K P+ KAA
Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNLGI-SIGDVAKKLGEMWNNLNDSKKQPYITKAA 147
Query: 112 KRKLDYEKLMTAYNKK 127
K K YEK + Y K
Sbjct: 148 KLKEKYEKDVADYKSK 163
>gi|193787044|dbj|BAG51867.1| unnamed protein product [Homo sapiens]
Length = 176
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F E+R K EHP + ++ V K GE W + +K P+E KA
Sbjct: 51 KDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKA 109
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + AY K
Sbjct: 110 AKLKEKYEKDIAAYRAK 126
>gi|344235655|gb|EGV91758.1| High mobility group protein B2 [Cricetulus griseus]
Length = 159
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 54 NKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKR 113
N PKRPPSAFF+F E R K EHP + ++ K GE W + +K P+E KAAK
Sbjct: 42 NAPKRPPSAFFLFCSEHRPKIKSEHPGL-SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 100
Query: 114 KLDYEKLMTAYNKK 127
K YEK + AY K
Sbjct: 101 KEKYEKDIAAYRAK 114
>gi|444731734|gb|ELW72082.1| High mobility group protein B1 [Tupaia chinensis]
Length = 221
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F E+R K EHP + + V K GE W + EK P+E KA
Sbjct: 84 KDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-PIGDVAKKLGEMWINTAADEKQPYEKKA 142
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + AY K
Sbjct: 143 AKLKEKYEKDIAAYQAK 159
>gi|444732714|gb|ELW72989.1| Enkurin [Tupaia chinensis]
Length = 362
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F E+R K EHP + ++ K GE W + EK P+E KA
Sbjct: 90 KDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDAAKKLGEMWNNTAADEKQPYEKKA 148
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + AY K
Sbjct: 149 AKLKEKYEKDIAAYGAK 165
>gi|426251515|ref|XP_004019467.1| PREDICTED: high mobility group protein B2-like [Ovis aries]
Length = 209
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 54 NKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKR 113
N PKRPPSAFF+F E R K EHP + ++ K GE W + +K P+E KAAK
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGL-SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 151
Query: 114 KLDYEKLMTAYNKK 127
K YEK + AY K
Sbjct: 152 KEKYEKDIAAYRAK 165
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DPNKP+ S++ F++ R+ +K++HP+ + K E+WK+++ EK+ FE
Sbjct: 2 GKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K Y++ M Y
Sbjct: 62 DMAKSDKARYDREMKNY 78
>gi|426230076|ref|XP_004009107.1| PREDICTED: high mobility group protein B2-like [Ovis aries]
Length = 209
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 54 NKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKR 113
N PKRPPSAFF+F E R K EHP + ++ K GE W + +K P+E KAAK
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGL-SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 151
Query: 114 KLDYEKLMTAYNKK 127
K YEK + AY K
Sbjct: 152 KEKYEKDIAAYRAK 165
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DPNKP+ S++ F++ R+ +K++HP+ + K E+WK+++ EK+ FE
Sbjct: 2 GKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K Y++ M Y
Sbjct: 62 DMAKSDKARYDREMKNY 78
>gi|417397133|gb|JAA45600.1| Putative nucleosome-binding factor spn pob3 subunit [Desmodus
rotundus]
Length = 208
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 54 NKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKR 113
N PKRPPSAFF+F E R K EHP + ++ K GE W + +K P+E KAAK
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGL-SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 151
Query: 114 KLDYEKLMTAYNKK 127
K YEK + AY K
Sbjct: 152 KEKYEKDIAAYRAK 165
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
AK DPNKP+ S++ F++ R+ +K++HP+ S K E+WK+++ EK+ FE
Sbjct: 2 AKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFSEFSKKCSERWKTMSAKEKSKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K Y++ M Y
Sbjct: 62 DMAKSDKARYDREMKNY 78
>gi|291413749|ref|XP_002723129.1| PREDICTED: high-mobility group box 2 [Oryctolagus cuniculus]
Length = 219
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 54 NKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKR 113
N PKRPPSAFF+F E R K EHP + ++ K GE W + +K P+E KAAK
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGL-SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 151
Query: 114 KLDYEKLMTAY 124
K YEK + AY
Sbjct: 152 KEKYEKDIAAY 162
Score = 42.4 bits (98), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 45/78 (57%), Gaps = 3/78 (3%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAV--GKAGGEKWKSLTDAEKAPF 106
K DPNKP+ S++ F++ R+ +K++HP+ +V+ V K E+WK+++ E + F
Sbjct: 2 GKGDPNKPRGKMSSYAFFVQTCREEHKRKHPDS-SVNFVEFSKKCSERWKTMSAKENSKF 60
Query: 107 EAKAAKRKLDYEKLMTAY 124
E A K Y++ M Y
Sbjct: 61 EDMAKSDKARYDREMKNY 78
>gi|194208319|ref|XP_001498869.2| PREDICTED: high mobility group protein B2-like [Equus caballus]
Length = 210
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 54 NKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKR 113
N PKRPPSAFF+F E R K EHP + ++ K GE W + +K P+E KAAK
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGL-SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 151
Query: 114 KLDYEKLMTAYNKK 127
K YEK + AY K
Sbjct: 152 KEKYEKDIAAYRAK 165
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DPNK + S++ F++ R+ +K++HP+ + K E+WK+++ EK+ FE
Sbjct: 2 GKGDPNKARGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K Y++ M Y
Sbjct: 62 DMAKSDKARYDREMKNY 78
>gi|194666188|ref|XP_875720.3| PREDICTED: high mobility group protein B2 [Bos taurus]
gi|297473608|ref|XP_002686711.1| PREDICTED: high mobility group protein B2 [Bos taurus]
gi|296488702|tpg|DAA30815.1| TPA: high-mobility group box 2-like [Bos taurus]
Length = 283
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 54 NKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKR 113
N PKRPPSAFF+F E R K EHP + ++ K GE W + +K P+E KAAK
Sbjct: 167 NAPKRPPSAFFLFCSEHRPKIKSEHPGL-SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 225
Query: 114 KLDYEKLMTAYNKK 127
K YEK + AY K
Sbjct: 226 KEKYEKDIAAYRAK 239
>gi|8393536|ref|NP_058883.1| high mobility group protein B2 [Rattus norvegicus]
gi|293340790|ref|XP_001063065.2| PREDICTED: high mobility group protein B2-like [Rattus norvegicus]
gi|293352163|ref|XP_573272.3| PREDICTED: high mobility group protein B2-like [Rattus norvegicus]
gi|1708260|sp|P52925.2|HMGB2_RAT RecName: Full=High mobility group protein B2; AltName: Full=High
mobility group protein 2; Short=HMG-2
gi|1304193|dbj|BAA12350.1| HMG2 [Rattus norvegicus]
gi|51259308|gb|AAH78866.1| Hmgb2 protein [Rattus norvegicus]
gi|58476482|gb|AAH89854.1| Hmgb2 protein [Rattus norvegicus]
gi|77567606|gb|AAI07456.1| Hmgb2 protein [Rattus norvegicus]
gi|149032266|gb|EDL87172.1| rCG59188 [Rattus norvegicus]
Length = 210
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 54 NKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKR 113
N PKRPPSAFF+F E R K EHP + ++ K GE W + +K P+E KAAK
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGL-SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 151
Query: 114 KLDYEKLMTAYNKK 127
K YEK + AY K
Sbjct: 152 KEKYEKDIAAYRAK 165
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DPNKP+ S++ F++ R+ +K++HP+ + K E+WK+++ EK+ FE
Sbjct: 2 GKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K Y++ M Y
Sbjct: 62 DLAKSDKARYDREMKNY 78
>gi|395840000|ref|XP_003792858.1| PREDICTED: high mobility group protein B2 [Otolemur garnettii]
Length = 209
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 54 NKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKR 113
N PKRPPSAFF+F E R K EHP + ++ K GE W + +K P+E KAAK
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGL-SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 151
Query: 114 KLDYEKLMTAY 124
K YEK + AY
Sbjct: 152 KEKYEKDIAAY 162
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DPNKP+ S++ F++ R+ +K++HP+ + K E+WK+++ EK+ FE
Sbjct: 2 GKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K Y++ M Y
Sbjct: 62 DMAKNDKARYDREMKNY 78
>gi|291413997|ref|XP_002723251.1| PREDICTED: high-mobility group box 2 [Oryctolagus cuniculus]
Length = 210
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 54 NKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKR 113
N PKRPPSAFF+F E R K EHP + ++ K GE W + +K P+E KAAK
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGL-SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 151
Query: 114 KLDYEKLMTAYNKK 127
K YEK + AY K
Sbjct: 152 KEKYEKDIAAYRAK 165
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DPNKP+ S++ F++ R+ +K++HP+ + K E+WK+++ EK+ FE
Sbjct: 2 GKGDPNKPRGKMSSYAFFVQMCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K Y++ M Y
Sbjct: 62 DMAKSDKARYDREMKNY 78
>gi|431918327|gb|ELK17554.1| High mobility group protein B2 [Pteropus alecto]
Length = 209
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 54 NKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKR 113
N PKRPPSAFF+F E R K EHP + ++ K GE W + +K P+E KAAK
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGL-SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 151
Query: 114 KLDYEKLMTAYNKK 127
K YEK + AY K
Sbjct: 152 KEKYEKDIAAYRAK 165
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DPNKP+ S++ F++ R+ +K++HP+ + K E+WK+++ EK+ FE
Sbjct: 2 GKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K Y++ M Y
Sbjct: 62 DMAKSDKARYDREMKNY 78
>gi|426220609|ref|XP_004004507.1| PREDICTED: high mobility group protein B2 [Ovis aries]
Length = 205
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 54 NKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKR 113
N PKRPPSAFF+F E R K EHP + ++ K GE W + +K P+E KAAK
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGL-SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 151
Query: 114 KLDYEKLMTAYNKK 127
K YEK + AY K
Sbjct: 152 KEKYEKDIAAYRAK 165
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DPNKP+ S++ F++ R+ +K++HP+ + K E+WK+++ EK+ FE
Sbjct: 2 GKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K Y++ M Y
Sbjct: 62 DMAKSDKARYDREMKNY 78
>gi|73993609|ref|XP_543194.2| PREDICTED: high mobility group protein B2 isoform 1 [Canis lupus
familiaris]
gi|301753755|ref|XP_002912713.1| PREDICTED: high mobility group protein B2-like [Ailuropoda
melanoleuca]
gi|410956554|ref|XP_003984907.1| PREDICTED: high mobility group protein B2 [Felis catus]
gi|281338293|gb|EFB13877.1| hypothetical protein PANDA_000462 [Ailuropoda melanoleuca]
Length = 210
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 54 NKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKR 113
N PKRPPSAFF+F E R K EHP + ++ K GE W + +K P+E KAAK
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGL-SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 151
Query: 114 KLDYEKLMTAYNKK 127
K YEK + AY K
Sbjct: 152 KEKYEKDIAAYRAK 165
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DPNKP+ S++ F++ R+ +K++HP+ + K E+WK+++ EK+ FE
Sbjct: 2 GKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K Y++ M Y
Sbjct: 62 DMAKSDKARYDREMKNY 78
>gi|11321591|ref|NP_002120.1| high mobility group protein B2 [Homo sapiens]
gi|83035095|ref|NP_001032705.1| high mobility group protein B2 [Bos taurus]
gi|194688133|ref|NP_001124160.1| high mobility group protein B2 [Homo sapiens]
gi|194688135|ref|NP_001124161.1| high mobility group protein B2 [Homo sapiens]
gi|332820789|ref|XP_517538.3| PREDICTED: high mobility group protein B2 isoform 2 [Pan
troglodytes]
gi|332820791|ref|XP_003310651.1| PREDICTED: high mobility group protein B2 isoform 1 [Pan
troglodytes]
gi|397505874|ref|XP_003823467.1| PREDICTED: high mobility group protein B2 isoform 1 [Pan paniscus]
gi|397505876|ref|XP_003823468.1| PREDICTED: high mobility group protein B2 isoform 2 [Pan paniscus]
gi|397505878|ref|XP_003823469.1| PREDICTED: high mobility group protein B2 isoform 3 [Pan paniscus]
gi|410038949|ref|XP_003950520.1| PREDICTED: high mobility group protein B2 [Pan troglodytes]
gi|123374|sp|P26583.2|HMGB2_HUMAN RecName: Full=High mobility group protein B2; AltName: Full=High
mobility group protein 2; Short=HMG-2
gi|109940084|sp|P40673.3|HMGB2_BOVIN RecName: Full=High mobility group protein B2; AltName: Full=High
mobility group protein 2; Short=HMG-2
gi|32333|emb|CAA44395.1| HMG-2 [Homo sapiens]
gi|184236|gb|AAA58659.1| high mobility group 2 protein [Homo sapiens]
gi|12654471|gb|AAH01063.1| High-mobility group box 2 [Homo sapiens]
gi|54696426|gb|AAV38585.1| high-mobility group box 2 [Homo sapiens]
gi|61358840|gb|AAX41628.1| high-mobility group box 2 [synthetic construct]
gi|71679685|gb|AAI00020.1| HMGB2 protein [Homo sapiens]
gi|81674324|gb|AAI09756.1| High-mobility group box 2 [Bos taurus]
gi|119625163|gb|EAX04758.1| high-mobility group box 2, isoform CRA_a [Homo sapiens]
gi|119625164|gb|EAX04759.1| high-mobility group box 2, isoform CRA_a [Homo sapiens]
gi|123982946|gb|ABM83214.1| high-mobility group box 2 [synthetic construct]
gi|123997623|gb|ABM86413.1| high-mobility group box 2 [synthetic construct]
gi|189053183|dbj|BAG34805.1| unnamed protein product [Homo sapiens]
gi|208966462|dbj|BAG73245.1| high-mobility group box 2 [synthetic construct]
gi|296484972|tpg|DAA27087.1| TPA: high mobility group protein B2 [Bos taurus]
gi|380785663|gb|AFE64707.1| high mobility group protein B2 [Macaca mulatta]
gi|383417929|gb|AFH32178.1| high mobility group protein B2 [Macaca mulatta]
gi|383417931|gb|AFH32179.1| high mobility group protein B2 [Macaca mulatta]
gi|383417933|gb|AFH32180.1| high mobility group protein B2 [Macaca mulatta]
gi|384941858|gb|AFI34534.1| high mobility group protein B2 [Macaca mulatta]
gi|384946750|gb|AFI36980.1| high mobility group protein B2 [Macaca mulatta]
gi|410212048|gb|JAA03243.1| high-mobility group box 2 [Pan troglodytes]
gi|410212050|gb|JAA03244.1| high-mobility group box 2 [Pan troglodytes]
gi|410253758|gb|JAA14846.1| high-mobility group box 2 [Pan troglodytes]
gi|410253760|gb|JAA14847.1| high-mobility group box 2 [Pan troglodytes]
gi|410304294|gb|JAA30747.1| high-mobility group box 2 [Pan troglodytes]
gi|410304296|gb|JAA30748.1| high-mobility group box 2 [Pan troglodytes]
gi|410337391|gb|JAA37642.1| high-mobility group box 2 [Pan troglodytes]
gi|410337393|gb|JAA37643.1| high-mobility group box 2 [Pan troglodytes]
gi|410337395|gb|JAA37644.1| high mobility group box 2 [Pan troglodytes]
gi|440908504|gb|ELR58513.1| High mobility group protein B2 [Bos grunniens mutus]
gi|738688|prf||2001363A high mobility group protein 2
Length = 209
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 54 NKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKR 113
N PKRPPSAFF+F E R K EHP + ++ K GE W + +K P+E KAAK
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGL-SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 151
Query: 114 KLDYEKLMTAYNKK 127
K YEK + AY K
Sbjct: 152 KEKYEKDIAAYRAK 165
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DPNKP+ S++ F++ R+ +K++HP+ + K E+WK+++ EK+ FE
Sbjct: 2 GKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K Y++ M Y
Sbjct: 62 DMAKSDKARYDREMKNY 78
>gi|383417927|gb|AFH32177.1| high mobility group protein B2 [Macaca mulatta]
Length = 206
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 54 NKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKR 113
N PKRPPSAFF+F E R K EHP + ++ K GE W + +K P+E KAAK
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGL-SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 151
Query: 114 KLDYEKLMTAYNKK 127
K YEK + AY K
Sbjct: 152 KEKYEKDIAAYRAK 165
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DPNKP+ S++ F++ R+ +K++HP+ + K E+WK+++ EK+ FE
Sbjct: 2 GKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K Y++ M Y
Sbjct: 62 DMAKSDKARYDREMKNY 78
>gi|351701092|gb|EHB04011.1| High mobility group protein B2 [Heterocephalus glaber]
Length = 215
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 54 NKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKR 113
N PKRPPSAFF+F E R K EHP + ++ K GE W + +K P+E KAAK
Sbjct: 94 NAPKRPPSAFFLFCSEHRPKIKSEHPGL-SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 152
Query: 114 KLDYEKLMTAYNKK 127
K YEK + AY K
Sbjct: 153 KEKYEKDIAAYRAK 166
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DPNKP+ S++ F++ R+ +K++HP+ + K E+WK+++ EK+ FE
Sbjct: 2 GKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K Y++ M Y
Sbjct: 62 DMAKSDKARYDREMKNY 78
>gi|296195168|ref|XP_002745261.1| PREDICTED: high mobility group protein B2-like isoform 2
[Callithrix jacchus]
Length = 205
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 54 NKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKR 113
N PKRPPSAFF+F E R K EHP + ++ K GE W + +K P+E KAAK
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGL-SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 151
Query: 114 KLDYEKLMTAYNKK 127
K YEK + AY K
Sbjct: 152 KEKYEKDIAAYRAK 165
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DPNKP+ S++ F++ R+ +K++HP+ + K E+WK+++ EK+ FE
Sbjct: 2 GKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K Y++ M Y
Sbjct: 62 DMAKSDKARYDREMKNY 78
>gi|291385922|ref|XP_002709517.1| PREDICTED: high-mobility group box 2 [Oryctolagus cuniculus]
gi|344288245|ref|XP_003415861.1| PREDICTED: high mobility group protein B2-like [Loxodonta africana]
Length = 210
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 54 NKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKR 113
N PKRPPSAFF+F E R K EHP + ++ K GE W + +K P+E KAAK
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGL-SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 151
Query: 114 KLDYEKLMTAYNKK 127
K YEK + AY K
Sbjct: 152 KEKYEKDIAAYRAK 165
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DPNKP+ S++ F++ R+ +K++HP+ + K E+WK+++ EK+ FE
Sbjct: 2 GKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K Y++ M Y
Sbjct: 62 DMAKSDKARYDREMKNY 78
>gi|149060359|gb|EDM11073.1| rCG63620 [Rattus norvegicus]
Length = 198
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 54 NKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKR 113
N PKRPPSAFF+F E R K EHP + ++ K GE W + +K P+E KAAK
Sbjct: 81 NAPKRPPSAFFLFCSEHRPKIKSEHPGL-SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 139
Query: 114 KLDYEKLMTAYNKK 127
K YEK + AY K
Sbjct: 140 KEKYEKDIAAYRAK 153
>gi|297674678|ref|XP_002815340.1| PREDICTED: high mobility group protein B2 isoform 1 [Pongo abelii]
gi|297674680|ref|XP_002815341.1| PREDICTED: high mobility group protein B2 isoform 2 [Pongo abelii]
gi|395735499|ref|XP_003776594.1| PREDICTED: high mobility group protein B2 [Pongo abelii]
gi|402870856|ref|XP_003899415.1| PREDICTED: high mobility group protein B2 isoform 1 [Papio anubis]
gi|402870858|ref|XP_003899416.1| PREDICTED: high mobility group protein B2 isoform 2 [Papio anubis]
gi|402871219|ref|XP_003899573.1| PREDICTED: high mobility group protein B2-like [Papio anubis]
gi|90086209|dbj|BAE91657.1| unnamed protein product [Macaca fascicularis]
Length = 210
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 54 NKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKR 113
N PKRPPSAFF+F E R K EHP + ++ K GE W + +K P+E KAAK
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGL-SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 151
Query: 114 KLDYEKLMTAYNKK 127
K YEK + AY K
Sbjct: 152 KEKYEKDIAAYRAK 165
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DPNKP+ S++ F++ R+ +K++HP+ + K E+WK+++ EK+ FE
Sbjct: 2 GKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K Y++ M Y
Sbjct: 62 DMAKSDKARYDREMKNY 78
>gi|332217748|ref|XP_003258025.1| PREDICTED: high mobility group protein B2 [Nomascus leucogenys]
gi|426346003|ref|XP_004040680.1| PREDICTED: high mobility group protein B2 isoform 1 [Gorilla
gorilla gorilla]
gi|426346005|ref|XP_004040681.1| PREDICTED: high mobility group protein B2 isoform 2 [Gorilla
gorilla gorilla]
gi|426346007|ref|XP_004040682.1| PREDICTED: high mobility group protein B2 isoform 3 [Gorilla
gorilla gorilla]
gi|54696428|gb|AAV38586.1| high-mobility group box 2 [Homo sapiens]
Length = 208
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 54 NKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKR 113
N PKRPPSAFF+F E R K EHP + ++ K GE W + +K P+E KAAK
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGL-SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 151
Query: 114 KLDYEKLMTAYNKK 127
K YEK + AY K
Sbjct: 152 KEKYEKDIAAYRAK 165
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DPNKP+ S++ F++ R+ +K++HP+ + K E+WK+++ EK+ FE
Sbjct: 2 GKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K Y++ M Y
Sbjct: 62 DMAKSDKARYDREMKNY 78
>gi|444724258|gb|ELW64868.1| High mobility group protein B1 [Tupaia chinensis]
Length = 140
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
K PN KRPPSAFF+F E+R K EHP + ++ V K GE W + +K P+E K
Sbjct: 28 KGPNAAKRPPSAFFLFCSEYRPKIKGEHPGL-SIGGVAKKLGEVWNNTAADDKQPYEKKP 86
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + AY K
Sbjct: 87 AKLKEKYEKDIAAYPDK 103
>gi|355778495|gb|EHH63531.1| hypothetical protein EGM_16518 [Macaca fascicularis]
Length = 210
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 54 NKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKR 113
N PKRPPSAFF+F E R K EHP + ++ K GE W + +K P+E KAAK
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGL-SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 151
Query: 114 KLDYEKLMTAYNKK 127
K YEK + AY K
Sbjct: 152 KEKYEKDIAAYRAK 165
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DPNKP+ S++ F++ R+ +K++HP + K E+WK+++ EK+ FE
Sbjct: 2 GKGDPNKPRGKMSSYAFFVQTCREEHKKKHPESSVNFAEFSKKCSERWKTMSAKEKSKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K Y++ M Y
Sbjct: 62 DMAKSDKARYDREMKNY 78
>gi|355687725|gb|EHH26309.1| hypothetical protein EGK_16239 [Macaca mulatta]
Length = 209
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 54 NKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKR 113
N PKRPPSAFF+F E R K EHP + ++ K GE W + +K P+E KAAK
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGL-SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 151
Query: 114 KLDYEKLMTAYNKK 127
K YEK + AY K
Sbjct: 152 KEKYEKDIAAYRAK 165
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DPNKP+ S++ F++ R+ +K++HP + K E+WK+++ EK+ FE
Sbjct: 2 GKGDPNKPRGKMSSYAFFVQTCREEHKKKHPESSVNFAEFSKKCSERWKTMSAKEKSKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K+ Y++ M Y
Sbjct: 62 GMAKSDKVRYDREMKNY 78
>gi|148673911|gb|EDL05858.1| mCG144566 [Mus musculus]
Length = 240
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F E+R K EHP + ++ V K GE W + +K P+E KA
Sbjct: 115 KDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKA 173
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + AY K
Sbjct: 174 AKLKEKYEKDIAAYRAK 190
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Query: 45 NVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEK 103
+ K DP KP+ S++ F++ R+ +K++HP+ S K E+WK+++ EK
Sbjct: 23 QLNMGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEK 82
Query: 104 APFEAKAAKRKLDYEKLMTAY 124
FE A K YE+ M Y
Sbjct: 83 GKFEDMAKADKARYEREMKTY 103
>gi|432102789|gb|ELK30264.1| High mobility group protein B1 [Myotis davidii]
Length = 245
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F E+R K EHP + ++ V K GE W + +K P+E KA
Sbjct: 90 KDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKA 148
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + AY K
Sbjct: 149 AKLKEKYEKDIAAYRAK 165
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DP KP+ S++ F++ R+ +K++HP+ S K E+WK+++ EK FE
Sbjct: 2 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K YE+ M Y
Sbjct: 62 DMAKADKARYEREMKTY 78
>gi|401626897|gb|EJS44815.1| nhp6bp [Saccharomyces arboricola H-6]
Length = 99
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
KKDPN PKR SA+ F E R + + E+P+V VG+ GE+WK+LT EK P+E+K
Sbjct: 21 KKDPNAPKRGLSAYMFFANETRDIVRSENPDV-TFGQVGRILGERWKALTAEEKVPYESK 79
Query: 110 AAKRKLDYEKLMTAYN 125
A K YE YN
Sbjct: 80 AQADKKRYESEKELYN 95
>gi|291413747|ref|XP_002723128.1| PREDICTED: high-mobility group box 2-like [Oryctolagus cuniculus]
Length = 234
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 54 NKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKR 113
N PKRPPSAFF+F E R K EHP + ++ K GE W + +K P+E KAAK
Sbjct: 117 NAPKRPPSAFFLFCSEHRPKIKSEHPGL-SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 175
Query: 114 KLDYEKLMTAYNKK 127
K YEK + AY K
Sbjct: 176 KEKYEKDIAAYRAK 189
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Query: 43 TKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDA 101
++V K DPNKP+ S++ F++ R+ +K++HP+ + K E+WK+++
Sbjct: 20 CRSVVMGKGDPNKPRGKMSSYAFFVQMCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAK 79
Query: 102 EKAPFEAKAAKRKLDYEKLMTAY 124
EK FE A K Y++ M Y
Sbjct: 80 EKPKFEDMAKSDKARYDREMKNY 102
>gi|148709727|gb|EDL41673.1| mCG9102 [Mus musculus]
Length = 215
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F E+R K EHP + ++ V K GE W + +K P+E KA
Sbjct: 90 KDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKA 148
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + AY K
Sbjct: 149 AKLKEKYEKDIAAYRAK 165
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DP KP+ S++ F++ R+ +K++HP+ S K E+WK+++ EK FE
Sbjct: 2 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K YE+ M Y
Sbjct: 62 DMAKADKARYEREMKTY 78
>gi|349576469|dbj|GAA21640.1| K7_Nhp6bp [Saccharomyces cerevisiae Kyokai no. 7]
Length = 99
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
KKDPN PKR SA+ F E R + + E+P+V VG+ GEKWK+LT EK P+E+K
Sbjct: 21 KKDPNAPKRGLSAYMFFANENRDIVRSENPDV-TFGQVGRILGEKWKALTAEEKQPYESK 79
Query: 110 AAKRKLDYEKLMTAYN 125
A K YE YN
Sbjct: 80 AQADKKRYESEKELYN 95
>gi|440631791|gb|ELR01710.1| non-histone chromosomal protein 6 [Geomyces destructans 20631-21]
Length = 101
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
KKDPN PKR SA+ F +E R ++E+P + + VGK GE+WK+L D ++ P+E K
Sbjct: 19 KKDPNAPKRGLSAYMFFAQEQRDNVREENPGI-SFGQVGKVLGERWKALNDKQRTPYETK 77
Query: 110 AAKRKLDYEKLMTAYN 125
A + K YE +YN
Sbjct: 78 AQEDKKRYEDEKASYN 93
>gi|380792505|gb|AFE68128.1| high mobility group protein B1, partial [Macaca mulatta]
Length = 183
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F E+R K EHP + ++ V K GE W + +K P+E KA
Sbjct: 90 KDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKA 148
Query: 111 AKRKLDYEKLMTAY 124
AK K YEK + AY
Sbjct: 149 AKLKEKYEKEIAAY 162
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DP KP+ S++ F++ R+ +K++HP+ S K E+WK+++ EK FE
Sbjct: 2 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K YE+ M Y
Sbjct: 62 DMAKADKARYEREMKTY 78
>gi|26350077|dbj|BAC38678.1| unnamed protein product [Mus musculus]
Length = 181
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F E+R K EHP + ++ V K GE W + +K P+E KA
Sbjct: 90 KDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKA 148
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + AY K
Sbjct: 149 AKLKEKYEKDIAAYRAK 165
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DP KP+ S++ F++ R+ +K++HP+ S K E+WK+++ EK FE
Sbjct: 2 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K YE+ M Y
Sbjct: 62 DMAKADKARYEREMKTY 78
>gi|47522942|ref|NP_999228.1| high mobility group protein B2 [Sus scrofa]
gi|123375|sp|P17741.2|HMGB2_PIG RecName: Full=High mobility group protein B2; AltName: Full=High
mobility group protein 2; Short=HMG-2
gi|164492|gb|AAA31051.1| non-histone protein HMG2 precursor [Sus scrofa]
Length = 210
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 54 NKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKR 113
N PKRPPSAFF+F E R K EHP + ++ K GE W + +K P+E KAAK
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGL-SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 151
Query: 114 KLDYEKLMTAY 124
K YEK + AY
Sbjct: 152 KEKYEKDIAAY 162
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DPNKP+ S++ F++ R+ +K++HP+ + K E+WK+++ EK+ FE
Sbjct: 2 GKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K Y++ M Y
Sbjct: 62 DMAKSDKARYDREMKNY 78
>gi|417397281|gb|JAA45674.1| Putative nucleosome-binding factor spn pob3 subunit [Desmodus
rotundus]
Length = 216
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F E+R K EHP + ++ V K GE W + +K P+E KA
Sbjct: 91 KDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKA 149
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + AY K
Sbjct: 150 AKLKEKYEKDIAAYRAK 166
Score = 42.4 bits (98), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DP KP+ S++ F++ R+ +K++HP+ S K E+WK+++ EK FE
Sbjct: 2 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 61
Query: 108 AKAAKRKLDYEKLM-TAY 124
A K YE+ M T+Y
Sbjct: 62 DMAKADKARYEREMKTSY 79
>gi|109098276|ref|XP_001102554.1| PREDICTED: high mobility group protein B1-like [Macaca mulatta]
Length = 215
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F E+R K EHP + ++ V K GE W + +K P+E KA
Sbjct: 90 KDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKA 148
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + AY K
Sbjct: 149 AKLKEKYEKDIAAYRAK 165
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DP KP+ S++ F++ R+ +K++HP+ S K E+WK+++ EK FE
Sbjct: 2 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
+ K YE+ M Y
Sbjct: 62 DMSKADKARYEREMKTY 78
>gi|109469394|ref|XP_001076232.1| PREDICTED: high mobility group protein B1-like [Rattus norvegicus]
gi|392338825|ref|XP_003753645.1| PREDICTED: high mobility group protein B1-like [Rattus norvegicus]
Length = 214
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F E+R K EHP + ++ V K GE W + +K P+E KA
Sbjct: 90 KDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTASDDKQPYEKKA 148
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK AY K
Sbjct: 149 AKLKEKYEKDTAAYRAK 165
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DP KP+ S++ F++ R+ +K++HP+ S V K E+WK+++ EK FE
Sbjct: 2 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEVSKKCSERWKTMSAKEKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K YE+ M Y
Sbjct: 62 DMAKADKARYEREMKTY 78
>gi|301757910|ref|XP_002914802.1| PREDICTED: high mobility group protein B1-like [Ailuropoda
melanoleuca]
Length = 215
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F E+R K EHP + ++ V K GE W + +K P+E KA
Sbjct: 90 KDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKA 148
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + AY K
Sbjct: 149 AKLKEKYEKDIAAYRAK 165
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DP K + S++ F++ R+ +K++HP+ S K E+WK+++ EK FE
Sbjct: 2 GKGDPKKLRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K YE+ M Y
Sbjct: 62 DMAKADKARYEREMKTY 78
>gi|67524855|ref|XP_660489.1| hypothetical protein AN2885.2 [Aspergillus nidulans FGSC A4]
gi|74597086|sp|Q5B995.1|NHP6_EMENI RecName: Full=Non-histone chromosomal protein 6
gi|40744280|gb|EAA63456.1| hypothetical protein AN2885.2 [Aspergillus nidulans FGSC A4]
gi|259486178|tpe|CBF83812.1| TPA: Non-histone chromosomal protein 6
[Source:UniProtKB/Swiss-Prot;Acc:Q5B995] [Aspergillus
nidulans FGSC A4]
Length = 106
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
KKDPN PKR SA+ F + R ++E+P + + VGK GEKWKSL+D E+ P+E K
Sbjct: 21 KKDPNAPKRGLSAYMFFANDNRDKVREENPGI-SFGQVGKMLGEKWKSLSDKERKPYEDK 79
Query: 110 AAKRKLDYEKLMTAY 124
AA K YE AY
Sbjct: 80 AAADKKRYEDEKAAY 94
>gi|30584163|gb|AAP36330.1| Homo sapiens high-mobility group box 1 [synthetic construct]
gi|54697182|gb|AAV38963.1| high-mobility group box 1 [synthetic construct]
gi|54697184|gb|AAV38964.1| high-mobility group box 1 [synthetic construct]
gi|61367269|gb|AAX42974.1| high-mobility group box 1 [synthetic construct]
gi|61367275|gb|AAX42975.1| high-mobility group box 1 [synthetic construct]
gi|61371572|gb|AAX43692.1| high-mobility group box 1 [synthetic construct]
Length = 216
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F E+R K EHP + ++ V K GE W + +K P+E KA
Sbjct: 90 KDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKA 148
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + AY K
Sbjct: 149 AKLKEKYEKDIAAYRAK 165
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DP KP+ S++ F++ R+ +K++HP+ S K E+WK+++ EK FE
Sbjct: 2 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K YE+ M Y
Sbjct: 62 DMAKADKARYEREMKTY 78
>gi|3342575|gb|AAC27652.1| high mobility group protein [Nannospalax ehrenbergi]
Length = 215
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F E+R K EHP + ++ V K GE W + +K P+E KA
Sbjct: 90 KDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKA 148
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + AY K
Sbjct: 149 AKLKEKYEKDIAAYRAK 165
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DP KP+ S++ F++ R+ +K++HP+ S K E+WK+++ EK FE
Sbjct: 2 GKGDPKKPRGKMSSYAFFVQTCREGHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K YE+ M Y
Sbjct: 62 DMAKADKARYEREMKTY 78
>gi|83014391|ref|XP_918585.1| PREDICTED: high mobility group protein B1-like [Mus musculus]
Length = 213
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F E+R K EHP + ++ V K GE W + +K P+E KA
Sbjct: 90 KDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKA 148
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + AY K
Sbjct: 149 AKLKEKYEKDIAAYRAK 165
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DP KP+ S++ F++ R+ +K++HP+ S K E+WK+++ EK FE
Sbjct: 2 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K YE+ M Y
Sbjct: 62 DMAKADKARYEREMKTY 78
>gi|74181373|dbj|BAE29962.1| unnamed protein product [Mus musculus]
Length = 215
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F E+R K EHP + ++ V K GE W + +K P+E KA
Sbjct: 90 KDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKA 148
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + AY K
Sbjct: 149 AKLKEKYEKDIAAYRAK 165
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DP KP+ S++ F++ R+ +K++HP+ S K E+WK+++ EK FE
Sbjct: 2 GKGDPKKPRGKMSSYAFFVQTCREEHKRKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K YE+ M Y
Sbjct: 62 DMAKADKARYEREMKTY 78
>gi|444732758|gb|ELW73033.1| High mobility group protein B2 [Tupaia chinensis]
Length = 234
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 54 NKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKR 113
N PKRPPSAFF+F E R K EHP + ++ K GE W + +K P+E KAAK
Sbjct: 127 NAPKRPPSAFFLFCSEHRPKIKSEHPGL-SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 185
Query: 114 KLDYEKLMTAYNKK 127
K YEK + AY K
Sbjct: 186 KEKYEKDIAAYRAK 199
>gi|5764678|gb|AAC27650.2| high mobility group protein [Nannospalax ehrenbergi]
Length = 215
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F E+R K EHP + ++ V K GE W + +K P+E KA
Sbjct: 90 KDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKA 148
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + AY K
Sbjct: 149 AKLKEKYEKDIAAYRAK 165
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DP KP+ S++ F++ R+ +K++HP+ S K E+WK+ + EK FE
Sbjct: 2 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTKSAKEKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K YE+ M Y
Sbjct: 62 DMAKADKARYEREMKTY 78
>gi|354484377|ref|XP_003504365.1| PREDICTED: high mobility group protein B2-like [Cricetulus griseus]
Length = 264
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 54 NKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKR 113
N PKRPPSAFF+F E R K EHP + ++ K GE W + +K P+E KAAK
Sbjct: 147 NAPKRPPSAFFLFCSEHRPKIKSEHPGL-SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 205
Query: 114 KLDYEKLMTAYNKK 127
K YEK + AY K
Sbjct: 206 KEKYEKDIAAYRAK 219
>gi|149691739|ref|XP_001488130.1| PREDICTED: high mobility group protein B1-like [Equus caballus]
Length = 212
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F E+R K EHP + ++ V K GE W + +K P+E KA
Sbjct: 90 KDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKA 148
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + AY K
Sbjct: 149 AKLKEKYEKDIAAYRAK 165
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K +P KP+ S++ F++ R+ +K++HP+ S K E+WK+++ EK FE
Sbjct: 2 GKGEPKKPRGRMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K YE+ M Y
Sbjct: 62 DMAKADKARYEREMKTY 78
>gi|148682766|gb|EDL14713.1| mCG116825 [Mus musculus]
Length = 162
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F E+R K EHP + ++ V K GE W + +K P+E KA
Sbjct: 41 KDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKA 99
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + AY K
Sbjct: 100 AKLKEKYEKDIAAYRAK 116
>gi|126327421|ref|XP_001367294.1| PREDICTED: high mobility group protein B1-like isoform 2
[Monodelphis domestica]
Length = 216
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F E+R K EHP + ++ V K GE W + +K P+E KA
Sbjct: 90 KDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKA 148
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + AY K
Sbjct: 149 AKLKEKYEKDIAAYRAK 165
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DP KP+ S++ F++ R+ +K++HP+ S K E+WK+++ EK FE
Sbjct: 2 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K+ YE+ M Y
Sbjct: 62 DMAKADKVRYEREMKTY 78
>gi|51592117|ref|NP_001004034.1| high mobility group protein B1 [Sus scrofa]
gi|123371|sp|P12682.3|HMGB1_PIG RecName: Full=High mobility group protein B1; AltName: Full=High
mobility group protein 1; Short=HMG-1
gi|164490|gb|AAA31050.1| non-histone protein HMG1 [Sus scrofa]
Length = 215
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F E+R K EHP + ++ V K GE W + +K P+E KA
Sbjct: 90 KDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKHPYEKKA 148
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + AY K
Sbjct: 149 AKLKEKYEKDIAAYRAK 165
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DP KP+ S++ F++ R+ +K++HP+ S K E+WK+++ EK FE
Sbjct: 2 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K YE+ M Y
Sbjct: 62 DMAKADKARYEREMKTY 78
>gi|380793129|gb|AFE68440.1| high mobility group protein B1, partial [Macaca mulatta]
Length = 195
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F E+R K EHP + ++ V K GE W + +K P+E KA
Sbjct: 90 KDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKA 148
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + AY K
Sbjct: 149 AKLKEKYEKDIAAYRAK 165
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DP KP+ S++ F++ R+ +K++HP+ S K E+WK+++ EK FE
Sbjct: 2 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K YE+ M Y
Sbjct: 62 DMAKADKARYEREMKTY 78
>gi|380793127|gb|AFE68439.1| high mobility group protein B1, partial [Macaca mulatta]
Length = 195
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F E+R K EHP + ++ V K GE W + +K P+E KA
Sbjct: 90 KDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKA 148
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + AY K
Sbjct: 149 AKLKEKYEKDIAAYRAK 165
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DP KP+ S++ F++ R+ +K++HP+ S K E+WK+++ EK FE
Sbjct: 2 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K YE+ M Y
Sbjct: 62 DMAKADKARYEREMKTY 78
>gi|119628863|gb|EAX08458.1| high-mobility group box 1, isoform CRA_b [Homo sapiens]
Length = 206
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F E+R K EHP + ++ V K GE W + +K P+E KA
Sbjct: 90 KDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKA 148
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + AY K
Sbjct: 149 AKLKEKYEKDIAAYRAK 165
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DP KP+ S++ F++ R+ +K++HP+ S K E+WK+++ EK FE
Sbjct: 2 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K YE+ M Y
Sbjct: 62 DMAKADKARYEREMKTY 78
>gi|26341410|dbj|BAC34367.1| unnamed protein product [Mus musculus]
Length = 178
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F E+R K EHP + ++ V K GE W + +K P+E KA
Sbjct: 90 KDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKA 148
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + AY K
Sbjct: 149 AKLKEKYEKDIAAYRAK 165
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DP KP+ S++ F++ R+ +K++HP+ S K E+WK+++ EK FE
Sbjct: 2 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K YE+ M Y
Sbjct: 62 DMAKADKARYEREMKTY 78
>gi|431920962|gb|ELK18731.1| High mobility group protein B1 [Pteropus alecto]
Length = 215
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F E+R K EHP + ++ V K GE W + +K P+E KA
Sbjct: 90 KDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKA 148
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + AY K
Sbjct: 149 AKLKEKYEKDIAAYRAK 165
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DP KP+ S++ F++ R+ +K++HP+ S K E+WK+++ EK FE
Sbjct: 2 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K YE+ M Y
Sbjct: 62 DMAKADKARYEREMKTY 78
>gi|55639639|ref|XP_509611.1| PREDICTED: high mobility group protein B1 isoform 15 [Pan
troglodytes]
gi|114649261|ref|XP_001140156.1| PREDICTED: high mobility group protein B1 isoform 3 [Pan
troglodytes]
gi|114649265|ref|XP_001140328.1| PREDICTED: high mobility group protein B1 isoform 5 [Pan
troglodytes]
gi|114649269|ref|XP_001140491.1| PREDICTED: high mobility group protein B1 isoform 7 [Pan
troglodytes]
gi|332841128|ref|XP_003314147.1| PREDICTED: high mobility group protein B1 [Pan troglodytes]
gi|332841133|ref|XP_003314149.1| PREDICTED: high mobility group protein B1 [Pan troglodytes]
gi|397513185|ref|XP_003826902.1| PREDICTED: high mobility group protein B1 isoform 1 [Pan paniscus]
gi|397513187|ref|XP_003826903.1| PREDICTED: high mobility group protein B1 isoform 2 [Pan paniscus]
gi|397513189|ref|XP_003826904.1| PREDICTED: high mobility group protein B1 isoform 3 [Pan paniscus]
gi|397513191|ref|XP_003826905.1| PREDICTED: high mobility group protein B1 isoform 4 [Pan paniscus]
gi|397513193|ref|XP_003826906.1| PREDICTED: high mobility group protein B1 isoform 5 [Pan paniscus]
gi|397513195|ref|XP_003826907.1| PREDICTED: high mobility group protein B1 isoform 6 [Pan paniscus]
gi|397513197|ref|XP_003826908.1| PREDICTED: high mobility group protein B1 isoform 7 [Pan paniscus]
gi|410047671|ref|XP_003952424.1| PREDICTED: high mobility group protein B1 [Pan troglodytes]
gi|410047673|ref|XP_003952425.1| PREDICTED: high mobility group protein B1 [Pan troglodytes]
gi|410047675|ref|XP_003952426.1| PREDICTED: high mobility group protein B1 [Pan troglodytes]
gi|410047677|ref|XP_003952427.1| PREDICTED: high mobility group protein B1 [Pan troglodytes]
gi|410047679|ref|XP_003952428.1| PREDICTED: high mobility group protein B1 [Pan troglodytes]
gi|410047682|ref|XP_003952429.1| PREDICTED: high mobility group protein B1 [Pan troglodytes]
gi|410047686|ref|XP_003952430.1| PREDICTED: high mobility group protein B1 [Pan troglodytes]
gi|410047688|ref|XP_003952431.1| PREDICTED: high mobility group protein B1 [Pan troglodytes]
Length = 215
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F E+R K EHP + ++ V K GE W + +K P+E KA
Sbjct: 90 KDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKA 148
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + AY K
Sbjct: 149 AKLKEKYEKDIAAYRAK 165
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DP KP+ S++ F++ R+ +K++HP+ S K E+WK+++ EK FE
Sbjct: 2 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K YE+ M Y
Sbjct: 62 DMAKADKARYEREMKTY 78
>gi|5764680|gb|AAC27653.2| high mobility group protein [Nannospalax ehrenbergi]
Length = 215
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F E+R K EHP + ++ V K GE W + +K P+E KA
Sbjct: 90 KDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKA 148
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + AY K
Sbjct: 149 AKLKEKYEKDIAAYRAK 165
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DP KP+ S++ F++ R+ +K++HP+ S K E+WK+++ EK FE
Sbjct: 2 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAEEKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K YE+ M Y
Sbjct: 62 DMAKADKARYEREMKTY 78
>gi|48145843|emb|CAG33144.1| HMGB1 [Homo sapiens]
Length = 215
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F E+R K EHP + ++ V K GE W + +K P+E KA
Sbjct: 90 KDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKA 148
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + AY K
Sbjct: 149 AKLKEKYEKDIAAYRAK 165
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DP KP+ S++ F++ R+ +K++HP+ S K E+WK+++ EK FE
Sbjct: 2 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K YE+ M Y
Sbjct: 62 DMAKADKARYEREMKTY 78
>gi|620098|emb|CAA56631.1| high mobility group protein [Mus musculus]
gi|71681313|gb|AAI00313.1| High mobility group box 1 [Mus musculus]
Length = 215
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F E+R K EHP + ++ V K GE W + +K P+E KA
Sbjct: 90 KDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKA 148
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + AY K
Sbjct: 149 AKLKEKYEKDIAAYRAK 165
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DP KP+ S++ F++ R+ +K++HP+ S K E+WK+++ EK FE
Sbjct: 2 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K YE+ M Y
Sbjct: 62 DMAKADKARYEREMKTY 78
>gi|4504425|ref|NP_002119.1| high mobility group protein B1 [Homo sapiens]
gi|50950133|ref|NP_001002937.1| high mobility group protein B1 [Canis lupus familiaris]
gi|126352708|ref|NP_001075304.1| high mobility group protein B1 [Equus caballus]
gi|281182655|ref|NP_001162380.1| high mobility group protein B1 [Papio anubis]
gi|284005385|ref|NP_001164752.1| high mobility group protein B1 [Oryctolagus cuniculus]
gi|388453289|ref|NP_001252735.1| high mobility group protein B1 [Macaca mulatta]
gi|291397530|ref|XP_002715999.1| PREDICTED: high-mobility group box 1 [Oryctolagus cuniculus]
gi|291399645|ref|XP_002716268.1| PREDICTED: high-mobility group box 1 [Oryctolagus cuniculus]
gi|296203653|ref|XP_002748994.1| PREDICTED: high mobility group protein B1 isoform 2 [Callithrix
jacchus]
gi|297714815|ref|XP_002833818.1| PREDICTED: high mobility group protein B1-like [Pongo abelii]
gi|332242218|ref|XP_003270282.1| PREDICTED: high mobility group protein B1-like isoform 1 [Nomascus
leucogenys]
gi|332242222|ref|XP_003270284.1| PREDICTED: high mobility group protein B1-like isoform 3 [Nomascus
leucogenys]
gi|332242226|ref|XP_003270286.1| PREDICTED: high mobility group protein B1-like isoform 5 [Nomascus
leucogenys]
gi|332242228|ref|XP_003270287.1| PREDICTED: high mobility group protein B1-like isoform 6 [Nomascus
leucogenys]
gi|332242230|ref|XP_003270288.1| PREDICTED: high mobility group protein B1-like isoform 7 [Nomascus
leucogenys]
gi|332242232|ref|XP_003270289.1| PREDICTED: high mobility group protein B1-like isoform 8 [Nomascus
leucogenys]
gi|344284506|ref|XP_003414007.1| PREDICTED: high mobility group protein B1-like [Loxodonta africana]
gi|348583405|ref|XP_003477463.1| PREDICTED: high mobility group protein B1-like [Cavia porcellus]
gi|426375079|ref|XP_004054375.1| PREDICTED: high mobility group protein B1-like isoform 1 [Gorilla
gorilla gorilla]
gi|426375081|ref|XP_004054376.1| PREDICTED: high mobility group protein B1-like isoform 2 [Gorilla
gorilla gorilla]
gi|426375083|ref|XP_004054377.1| PREDICTED: high mobility group protein B1-like isoform 3 [Gorilla
gorilla gorilla]
gi|426375085|ref|XP_004054378.1| PREDICTED: high mobility group protein B1-like isoform 4 [Gorilla
gorilla gorilla]
gi|426375087|ref|XP_004054379.1| PREDICTED: high mobility group protein B1-like isoform 5 [Gorilla
gorilla gorilla]
gi|426375089|ref|XP_004054380.1| PREDICTED: high mobility group protein B1-like isoform 6 [Gorilla
gorilla gorilla]
gi|426375091|ref|XP_004054381.1| PREDICTED: high mobility group protein B1-like isoform 7 [Gorilla
gorilla gorilla]
gi|426375093|ref|XP_004054382.1| PREDICTED: high mobility group protein B1-like isoform 8 [Gorilla
gorilla gorilla]
gi|441624073|ref|XP_004088962.1| PREDICTED: high mobility group protein B1-like [Nomascus
leucogenys]
gi|441624077|ref|XP_004088963.1| PREDICTED: high mobility group protein B1-like [Nomascus
leucogenys]
gi|441624084|ref|XP_004088964.1| PREDICTED: high mobility group protein B1-like [Nomascus
leucogenys]
gi|441624090|ref|XP_004088965.1| PREDICTED: high mobility group protein B1-like [Nomascus
leucogenys]
gi|441624094|ref|XP_004088966.1| PREDICTED: high mobility group protein B1-like [Nomascus
leucogenys]
gi|123369|sp|P09429.3|HMGB1_HUMAN RecName: Full=High mobility group protein B1; AltName: Full=High
mobility group protein 1; Short=HMG-1
gi|61213476|sp|Q6YKA4.3|HMGB1_CANFA RecName: Full=High mobility group protein B1; AltName: Full=High
mobility group protein 1; Short=HMG-1
gi|75076928|sp|Q4R844.3|HMGB1_MACFA RecName: Full=High mobility group protein B1; AltName: Full=High
mobility group protein 1; Short=HMG-1
gi|119370722|sp|Q08IE6.3|HMGB1_HORSE RecName: Full=High mobility group protein B1; AltName: Full=High
mobility group protein 1; Short=HMG-1
gi|189028296|sp|B0CM99.1|HMGB1_CALJA RecName: Full=High mobility group protein B1; AltName: Full=High
mobility group protein 1; Short=HMG-1
gi|189028297|sp|B1MTB0.1|HMGB1_CALMO RecName: Full=High mobility group protein B1; AltName: Full=High
mobility group protein 1; Short=HMG-1
gi|189028298|sp|A9RA84.1|HMGB1_PAPAN RecName: Full=High mobility group protein B1; AltName: Full=High
mobility group protein 1; Short=HMG-1
gi|32327|emb|CAA31110.1| unnamed protein product [Homo sapiens]
gi|1435197|gb|AAB08987.1| non-histone chromatin protein HMG1 [Homo sapiens]
gi|13097234|gb|AAH03378.1| High-mobility group box 1 [Homo sapiens]
gi|21410205|gb|AAH30981.1| High-mobility group box 1 [Homo sapiens]
gi|30582719|gb|AAP35586.1| high-mobility group box 1 [Homo sapiens]
gi|37380997|gb|AAQ91389.1| high mobility group protein 1 [Homo sapiens]
gi|37548602|gb|AAN11296.1| high mobility group protein B1 [Canis lupus familiaris]
gi|37722533|gb|AAN11319.1| high mobility group B1 protein [Canis lupus familiaris]
gi|44890726|gb|AAH66889.1| High-mobility group box 1 [Homo sapiens]
gi|45709178|gb|AAH67732.1| High-mobility group box 1 [Homo sapiens]
gi|51476884|emb|CAH18408.1| hypothetical protein [Homo sapiens]
gi|54697178|gb|AAV38961.1| high-mobility group box 1 [Homo sapiens]
gi|60654989|gb|AAX32058.1| high mobility group box 1 [synthetic construct]
gi|61357252|gb|AAX41359.1| high-mobility group box 1 [synthetic construct]
gi|67968740|dbj|BAE00728.1| unnamed protein product [Macaca fascicularis]
gi|115354285|dbj|BAF33339.1| high-mobility group box 1 [Equus caballus]
gi|119628862|gb|EAX08457.1| high-mobility group box 1, isoform CRA_a [Homo sapiens]
gi|119628864|gb|EAX08459.1| high-mobility group box 1, isoform CRA_a [Homo sapiens]
gi|119628865|gb|EAX08460.1| high-mobility group box 1, isoform CRA_a [Homo sapiens]
gi|119628866|gb|EAX08461.1| high-mobility group box 1, isoform CRA_a [Homo sapiens]
gi|119628867|gb|EAX08462.1| high-mobility group box 1, isoform CRA_a [Homo sapiens]
gi|121073803|gb|ABM47301.1| high mobility group box 1 protein [Homo sapiens]
gi|152112978|gb|ABS29271.1| high-mobility group box 1 [Homo sapiens]
gi|158256420|dbj|BAF84183.1| unnamed protein product [Homo sapiens]
gi|162415900|gb|ABX89266.1| high-mobility group box 1 (predicted) [Papio anubis]
gi|165934066|gb|ABY74560.1| high-mobility group box 1 (predicted) [Callithrix jacchus]
gi|169402702|gb|ACA53510.1| high-mobility group box 1 (predicted) [Callicebus moloch]
gi|183396417|gb|ACC62098.1| high-mobility group box 1 (predicted) [Rhinolophus ferrumequinum]
gi|193783763|dbj|BAG53745.1| unnamed protein product [Homo sapiens]
gi|196050399|gb|ACG64310.1| high-mobility group box 1 (predicted) [Otolemur garnettii]
gi|216397586|gb|ACJ72830.1| high-mobility group box 1 (predicted) [Oryctolagus cuniculus]
gi|261858262|dbj|BAI45653.1| high-mobility group box 1 [synthetic construct]
gi|335775462|gb|AEH58580.1| high mobility group protein B1-like protein [Equus caballus]
gi|351700460|gb|EHB03379.1| High mobility group protein B1 [Heterocephalus glaber]
gi|387542840|gb|AFJ72047.1| high mobility group protein B1 [Macaca mulatta]
Length = 215
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F E+R K EHP + ++ V K GE W + +K P+E KA
Sbjct: 90 KDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKA 148
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + AY K
Sbjct: 149 AKLKEKYEKDIAAYRAK 165
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DP KP+ S++ F++ R+ +K++HP+ S K E+WK+++ EK FE
Sbjct: 2 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K YE+ M Y
Sbjct: 62 DMAKADKARYEREMKTY 78
>gi|402854944|ref|XP_003892110.1| PREDICTED: high mobility group protein B1-like isoform 1 [Papio
anubis]
gi|402854946|ref|XP_003892111.1| PREDICTED: high mobility group protein B1-like isoform 2 [Papio
anubis]
Length = 214
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F E+R K EHP + ++ V K GE W + +K P+E KA
Sbjct: 90 KDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKA 148
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + AY K
Sbjct: 149 AKLKEKYEKDIAAYRAK 165
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DP KP+ S++ F++ R+ +K++HP+ S K E+WK+++ EK FE
Sbjct: 2 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K YE+ M Y
Sbjct: 62 DMAKADKARYEREMKTY 78
>gi|397495503|ref|XP_003818592.1| PREDICTED: high mobility group protein B1-like [Pan paniscus]
Length = 209
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F E+R K EHP + ++ V K GE W + +K P+E KA
Sbjct: 90 KDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKA 148
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + AY K
Sbjct: 149 AKLKEKYEKDIAAYRAK 165
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DP KP+ S++ F++ R+ +K++HP+ S K E+WK+++ EK FE
Sbjct: 2 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K YE+ M Y
Sbjct: 62 DMAKADKARYEREMKTY 78
>gi|348551709|ref|XP_003461672.1| PREDICTED: high mobility group protein B1-like [Cavia porcellus]
Length = 214
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F E+R K EHP + ++ V K GE W + +K P+E KA
Sbjct: 90 KDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKA 148
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + AY K
Sbjct: 149 AKLKEKYEKDIAAYRAK 165
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DP KP+ S++ F++ R+ +K++HP+ S K E+WK+++ EK FE
Sbjct: 2 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K YE+ M Y
Sbjct: 62 DMAKADKARYEREMKTY 78
>gi|109510563|ref|XP_001059688.1| PREDICTED: high mobility group protein B1-like [Rattus norvegicus]
gi|392343404|ref|XP_003754879.1| PREDICTED: high mobility group protein B1-like [Rattus norvegicus]
Length = 213
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F E+R K EHP + ++ V K GE W + +K P+E KA
Sbjct: 90 KDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKA 148
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + AY K
Sbjct: 149 AKLKEKYEKDIAAYRAK 165
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DP KP+ S++ F++ R+ +K++HP+ S K E+WK+++ EK FE
Sbjct: 2 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K YE+ M Y
Sbjct: 62 DMAKADKARYEREMKTY 78
>gi|41386729|ref|NP_788785.1| high mobility group protein B1 [Bos taurus]
gi|410947173|ref|XP_003980327.1| PREDICTED: high mobility group protein B1 [Felis catus]
gi|123367|sp|P10103.3|HMGB1_BOVIN RecName: Full=High mobility group protein B1; AltName: Full=High
mobility group protein 1; Short=HMG-1
gi|417|emb|CAA31284.1| unnamed protein product [Bos taurus]
gi|73586656|gb|AAI02930.1| HMGB1 protein [Bos taurus]
gi|146231904|gb|ABQ13027.1| high-mobility group box 1 [Bos taurus]
gi|296481787|tpg|DAA23902.1| TPA: high mobility group protein B1 [Bos taurus]
Length = 215
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F E+R K EHP + ++ V K GE W + +K P+E KA
Sbjct: 90 KDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKA 148
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + AY K
Sbjct: 149 AKLKEKYEKDIAAYRAK 165
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DP KP+ S++ F++ R+ +K++HP+ S K E+WK+++ EK FE
Sbjct: 2 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K YE+ M Y
Sbjct: 62 DMAKADKARYEREMKTY 78
>gi|6754208|ref|NP_034569.1| high mobility group protein B1 [Mus musculus]
gi|6981026|ref|NP_037095.1| high mobility group protein B1 [Rattus norvegicus]
gi|407262920|ref|XP_003945388.1| PREDICTED: high mobility group protein B1-like [Mus musculus]
gi|52783618|sp|P63159.2|HMGB1_RAT RecName: Full=High mobility group protein B1; AltName:
Full=Amphoterin; AltName: Full=Heparin-binding protein
p30; AltName: Full=High mobility group protein 1;
Short=HMG-1
gi|52783747|sp|P63158.2|HMGB1_MOUSE RecName: Full=High mobility group protein B1; AltName: Full=High
mobility group protein 1; Short=HMG-1
gi|9082303|gb|AAF82799.1|AF275734_1 amphoterin [Rattus norvegicus]
gi|53382|emb|CAA78042.1| non-histone chromosomal high-mobility group 1 protein [Mus
musculus]
gi|56365|emb|CAA68526.1| unnamed protein product [Rattus norvegicus]
gi|202885|gb|AAA40729.1| Amphoterin [Rattus norvegicus]
gi|208488|gb|AAA73006.1| high mobility group 1 protein [synthetic construct]
gi|437102|gb|AAA20508.1| HMG-1 [Mus musculus]
gi|13879238|gb|AAH06586.1| High mobility group box 1 [Mus musculus]
gi|14250281|gb|AAH08565.1| High mobility group box 1 [Mus musculus]
gi|26332344|dbj|BAC29902.1| unnamed protein product [Mus musculus]
gi|26351305|dbj|BAC39289.1| unnamed protein product [Mus musculus]
gi|38512146|gb|AAH61779.1| High mobility group box 1 [Rattus norvegicus]
gi|51859468|gb|AAH81839.1| High mobility group box 1 [Rattus norvegicus]
gi|52789475|gb|AAH83067.1| High mobility group box 1 [Mus musculus]
gi|54648288|gb|AAH85090.1| High mobility group box 1 [Mus musculus]
gi|56788766|gb|AAH88402.1| High mobility group box 1 [Rattus norvegicus]
gi|61403558|gb|AAH91741.1| High mobility group box 1 [Mus musculus]
gi|62739258|gb|AAH94030.1| High mobility group box 1 [Mus musculus]
gi|74186113|dbj|BAE34226.1| unnamed protein product [Mus musculus]
gi|84040262|gb|AAI10668.1| Hmgb1 protein [Mus musculus]
gi|84105496|gb|AAI11469.1| High mobility group box 1 [Mus musculus]
gi|149034811|gb|EDL89531.1| rCG42800, isoform CRA_a [Rattus norvegicus]
gi|149034812|gb|EDL89532.1| rCG42800, isoform CRA_a [Rattus norvegicus]
gi|149034813|gb|EDL89533.1| rCG42800, isoform CRA_a [Rattus norvegicus]
gi|195539712|gb|AAI68143.1| High mobility group box 1 [Rattus norvegicus]
Length = 215
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F E+R K EHP + ++ V K GE W + +K P+E KA
Sbjct: 90 KDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKA 148
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + AY K
Sbjct: 149 AKLKEKYEKDIAAYRAK 165
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DP KP+ S++ F++ R+ +K++HP+ S K E+WK+++ EK FE
Sbjct: 2 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K YE+ M Y
Sbjct: 62 DMAKADKARYEREMKTY 78
>gi|3342573|gb|AAC27651.1| high mobility group protein [Nannospalax ehrenbergi]
Length = 215
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F E+R K EHP + ++ V K GE W + +K P+E KA
Sbjct: 90 KDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKA 148
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + AY K
Sbjct: 149 AKLKEKYEKDIAAYRAK 165
Score = 42.4 bits (98), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DP KP+ S++ F++ R+ +K++HP+ S + E+WK+++ EK FE
Sbjct: 2 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSERCSERWKTMSAKEKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K YE+ M Y
Sbjct: 62 DMAKADKARYEREMKTY 78
>gi|320580355|gb|EFW94578.1| high-mobility group non-histone chromosomal protein, putative
[Ogataea parapolymorpha DL-1]
Length = 91
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKR SA+ F E R + + E+P + A +GK GEKWK+L +A KAP+EAKA
Sbjct: 15 DPNAPKRSLSAYMFFANEQRDIVRAENPGI-AFGQIGKLLGEKWKALDEAGKAPYEAKAE 73
Query: 112 KRKLDYEKLMTAYNKKQ 128
K YE + Y K Q
Sbjct: 74 ADKKRYELEKSEYTKSQ 90
>gi|67475910|ref|XP_653586.1| high mobility group (HMG) box domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|56470556|gb|EAL48200.1| high mobility group (HMG) box domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|449703217|gb|EMD43706.1| high mobility group (HMG) box domain containing protein [Entamoeba
histolytica KU27]
Length = 111
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Query: 53 PNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAK 112
PN+PKRPP+ +F++L E R K+EHP+ K V+ + K E+WK+L + EK ++ KA
Sbjct: 23 PNRPKRPPTPYFLYLNEHRASIKEEHPDAK-VTEIAKIASEQWKALGEEEKKEYQTKADA 81
Query: 113 RKLDYEKLMTAYNKK 127
K Y+K + Y+ K
Sbjct: 82 AKEQYKKDIEKYDGK 96
>gi|332863449|ref|XP_001169802.2| PREDICTED: high mobility group protein B1-like, partial [Pan
troglodytes]
Length = 174
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F E+R K EHP + ++ V K GE W + +K P+E KA
Sbjct: 90 KDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKA 148
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + AY K
Sbjct: 149 AKLKEKYEKDIAAYRAK 165
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DP KP+ S++ F++ R+ +K++HP+ S K E+WK+++ EK FE
Sbjct: 2 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K YE+ M Y
Sbjct: 62 DMAKADKARYEREMKTY 78
>gi|332254661|ref|XP_003276450.1| PREDICTED: high mobility group protein B4 [Nomascus leucogenys]
Length = 189
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DP P+RPPS+F +F ++ K+E+PN V V KA GE W + TD EK P+E +AA
Sbjct: 89 DPQAPRRPPSSFLLFCQDHYAQLKRENPNWSVVQ-VAKATGEMWSTTTDLEKHPYEQRAA 147
Query: 112 KRKLDYEKLMTAYNKKQ 128
+ Y + + Y K+
Sbjct: 148 LLRAKYFEELELYRKQH 164
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 55 KPKRPPSAFFVFLEEFRKVYKQEHPNVK-AVSAVGKAGGEKWKSLTDAEKAPFEAKAAKR 113
KPK S++ FL +R +K++ PN + E+W+S++ EKA +EA A
Sbjct: 8 KPKANVSSYVHFLLNYRNTFKEQQPNTYVGFKEFSRKCSEEWRSISKHEKAKYEALAKVD 67
Query: 114 KLDYEKLMTAY 124
K Y++ M Y
Sbjct: 68 KARYQEEMMNY 78
>gi|190195542|gb|ACE73639.1| high-mobility group box 1 (predicted) [Sorex araneus]
Length = 215
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F E+R K EHP + ++ V K GE W + +K P+E KA
Sbjct: 90 KDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKA 148
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + AY K
Sbjct: 149 AKLKEKYEKDIAAYRAK 165
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DP KP+ S++ F++ R+ +K++HP+ S K E+WK+++ EK FE
Sbjct: 2 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K YE+ M Y
Sbjct: 62 DMAKADKARYEREMKTY 78
>gi|414869181|tpg|DAA47738.1| TPA: hypothetical protein ZEAMMB73_864709 [Zea mays]
Length = 198
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 43/68 (63%), Gaps = 5/68 (7%)
Query: 33 LKASRSSNKRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGG 92
L A+ + KR K + S K PKRPPSAFFVF+ EFR+ Y+ +HP K++ V K G
Sbjct: 136 LWAAGIAGKRKKVIMSGK-----PKRPPSAFFVFMSEFRQEYQVQHPGNKSIVVVSKTAG 190
Query: 93 EKWKSLTD 100
EKW + +D
Sbjct: 191 EKWHAKSD 198
>gi|149635755|ref|XP_001508702.1| PREDICTED: high mobility group protein B1-like [Ornithorhynchus
anatinus]
Length = 215
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F E+R K EHP + ++ V K GE W + +K P+E KA
Sbjct: 90 KDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKA 148
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + AY K
Sbjct: 149 AKLKEKYEKDIAAYRAK 165
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DP KP+ S++ F++ R+ +K++HP+ S K E+WK+++ EK FE
Sbjct: 2 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDAAVNFSEFSKKCSERWKTMSAKEKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K+ YE+ M Y
Sbjct: 62 DMAKADKVRYEREMKTY 78
>gi|395753165|ref|XP_003779555.1| PREDICTED: high mobility group protein B1-like [Pongo abelii]
Length = 215
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KD N PKR PSAFF+F E+R K EHP + ++ V K GE W + +K P+E KA
Sbjct: 90 KDLNAPKRTPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKA 148
Query: 111 AKRKLDYEKLMTAYNKK 127
K K YEK + AY K
Sbjct: 149 VKLKEKYEKDIAAYRAK 165
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DP KP+ S++ F++ ++ K++HP+ S K E+WK+++ EK FE
Sbjct: 2 GKGDPKKPRGKMSSYAFFVQTCQEEKKKKHPDASVNFSEFSKTCSERWKTISAKEKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
K YE+ M Y
Sbjct: 62 DMVKADKARYEREMKTY 78
>gi|90103305|gb|ABD85497.1| high mobility group box 1-like [Ictalurus punctatus]
Length = 182
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F E+R K+E P + ++ V K GE W + EK P+E KA
Sbjct: 70 KDPNAPKRPPSAFFIFCAEYRPKVKEETPGL-SIGDVAKKLGEMWNKTSAEEKQPYEKKA 128
Query: 111 AKRKLDYEKLMTAYNK 126
AK K YEK + AY K
Sbjct: 129 AKLKEKYEKDIAAYRK 144
>gi|426236471|ref|XP_004012192.1| PREDICTED: high mobility group protein B1-like [Ovis aries]
Length = 213
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F E+R K EHP + ++ V K GE W + +K P+E KA
Sbjct: 90 KDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGNVAKKLGEMWNNTAADDKQPYEKKA 148
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + AY K
Sbjct: 149 AKLKEKYEKDIAAYRAK 165
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DP KP+ S++ F++ R+ +K++HP+ S K E+WK+++ EK FE
Sbjct: 2 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K YE+ M Y
Sbjct: 62 DMAKADKARYEREMKTY 78
>gi|402865885|ref|XP_003897133.1| PREDICTED: high mobility group protein B1-like [Papio anubis]
Length = 221
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F E+R K EHP + ++ V K GE W + +K P+E KA
Sbjct: 96 KDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKA 154
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + AY K
Sbjct: 155 AKLKEKYEKDIAAYRAK 171
Score = 42.0 bits (97), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DP KP+ S++ F++ R+ +K++HP+ S K E+WK+++ EK FE
Sbjct: 2 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K YE+ M +
Sbjct: 62 DMAKADKARYEREMKTW 78
>gi|444707034|gb|ELW48343.1| High mobility group protein B1 [Tupaia chinensis]
Length = 203
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F E+R K EHP + ++ V K GE W + +K P+E KA
Sbjct: 78 KDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKA 136
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + AY K
Sbjct: 137 AKLKEKYEKDIAAYRAK 153
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 61 SAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKLDYEK 119
S++ F++ R+ +K++HP+ S K E+WK+++ EK FE A K YE+
Sbjct: 2 SSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYER 61
Query: 120 LMTAY 124
M Y
Sbjct: 62 EMKTY 66
>gi|149030113|gb|EDL85190.1| rCG63106 [Rattus norvegicus]
Length = 201
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F E+R K EHP + ++ V K GE W + +K P+E KA
Sbjct: 78 KDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKA 136
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + AY K
Sbjct: 137 AKLKEKYEKDIAAYRAK 153
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 61 SAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKLDYEK 119
S++ F++ R+ +K++HP+ S K E+WK+++ EK FE A K YE+
Sbjct: 2 SSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYER 61
Query: 120 LMTAY 124
M Y
Sbjct: 62 EMKTY 66
>gi|410057418|ref|XP_003954213.1| PREDICTED: high mobility group protein B1-like [Pan troglodytes]
Length = 210
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F E+R K EHP + +V V K GE W + +K P+E KA
Sbjct: 90 KDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SVGDVAKKLGEMWNNAAADDKQPYEKKA 148
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + AY K
Sbjct: 149 AKLKEKYEKDIAAYRAK 165
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DP KP+ S++ F++ R+ +K++HP+ S K E+WK+++ EK FE
Sbjct: 2 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K YE+ M Y
Sbjct: 62 DMAKADKARYEREMKTY 78
>gi|291415825|ref|XP_002724150.1| PREDICTED: high-mobility group box 2 [Oryctolagus cuniculus]
Length = 210
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 54 NKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKR 113
N PKRPPSAFF+F E R K EHP + ++ K GE W + +K P+E KAAK
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGL-SIGDTAKKLGEMWSEHSVKDKQPYEQKAAKL 151
Query: 114 KLDYEKLMTAYNKK 127
K YEK + AY K
Sbjct: 152 KEKYEKDIAAYRAK 165
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFEA 108
K PNKP+ S++ F++ R+ +K++HP+ + K E+WK+++ EK+ FE
Sbjct: 3 KGHPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 109 KAAKRKLDYEKLMTAY 124
A K Y++ M Y
Sbjct: 63 MAKSDKARYDREMKNY 78
>gi|395520861|ref|XP_003764541.1| PREDICTED: high mobility group protein B1 [Sarcophilus harrisii]
Length = 230
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F E+R K EHP + ++ V K GE W + +K P+E KA
Sbjct: 104 KDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKA 162
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + AY K
Sbjct: 163 AKLKEKYEKDIAAYRAK 179
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Query: 44 KNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAE 102
K +K K DP KP+ S++ F++ R+ +K++HP+ S K E+WK+++ E
Sbjct: 11 KVIKMGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKE 70
Query: 103 KAPFEAKAAKRKLDYEKLMTAY 124
K FE A K+ YE+ M Y
Sbjct: 71 KGKFEDMAKADKVRYEREMKTY 92
>gi|600761|gb|AAA57042.1| high mobility group 1 protein [Mus musculus]
Length = 215
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F E+R K EHP + ++ V K GE W + +K P+E KA
Sbjct: 90 KDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKA 148
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + AY K
Sbjct: 149 AKLKEKYEKDIAAYRAK 165
Score = 43.5 bits (101), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DP KP+ S++ F++ R+ +K++HP+ S K E+WK+++ EK FE
Sbjct: 2 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K YE+ M Y
Sbjct: 62 DMAKADKARYEREMKTY 78
>gi|148680486|gb|EDL12433.1| mCG1219 [Mus musculus]
Length = 215
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F E+R K EHP + ++ V K GE W + +K P+E KA
Sbjct: 90 KDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKA 148
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + AY K
Sbjct: 149 AKLKEKYEKDIAAYRAK 165
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DP KP+ ++ F++ R+ +K++HP+ S K E+WK++ EK FE
Sbjct: 2 GKGDPKKPRGKMYSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMYAKEKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K YE+ M Y
Sbjct: 62 DIAKADKARYEREMKTY 78
>gi|291395415|ref|XP_002714100.1| PREDICTED: high-mobility group box 2 [Oryctolagus cuniculus]
Length = 210
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKRPPSAFF+F E R + EH + ++ K GE W + ++ P+E KAA
Sbjct: 91 DPNAPKRPPSAFFLFCSEHRPKIRSEHSGL-SIGDTAKKLGEMWSEQSAKDEQPYEQKAA 149
Query: 112 KRKLDYEKLMTAYNKK 127
K K YEK + AY K
Sbjct: 150 KLKEKYEKDIAAYRAK 165
Score = 42.4 bits (98), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DPN+P+ S++ F++ R+ +K++HP+ + K E+WK+++ EK+ FE
Sbjct: 2 GKGDPNEPRGKMSSYAFFVQTCREEHKKKHPDSSINFAEFSKKCSERWKTMSAKEKSKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K Y++ M Y
Sbjct: 62 DMAKSDKACYDREMKNY 78
>gi|123368|sp|P07156.1|HMGB1_CRIGR RecName: Full=High mobility group protein B1; AltName: Full=High
mobility group protein 1; Short=HMG-1
gi|49483|emb|CAA68441.1| high mobility group protein [Cricetulus griseus]
Length = 180
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F E+R K EHP + ++ V K GE W + +K P+E KA
Sbjct: 55 KDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKA 113
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + AY K
Sbjct: 114 AKLKEKYEKDIAAYRAK 130
>gi|444729709|gb|ELW70116.1| High mobility group protein B1 [Tupaia chinensis]
Length = 215
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F E+R K EHP + ++ V K GE W + +K P+E KA
Sbjct: 90 KDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKA 148
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + AY K
Sbjct: 149 AKLKEKYEKDIAAYRAK 165
Score = 42.7 bits (99), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DP KP+ S++ F++ R+ +K++HP+ S K E+WK+++ EK FE
Sbjct: 2 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K YE+ M +
Sbjct: 62 DMAKADKAHYEREMKTF 78
>gi|167744990|pdb|2YRQ|A Chain A, Solution Structure Of The Tandem Hmg Box Domain From Human
High Mobility Group Protein B1
Length = 173
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F E+R K EHP + ++ V K GE W + +K P+E KA
Sbjct: 97 KDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKA 155
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + AY K
Sbjct: 156 AKLKEKYEKDIAAYRAK 172
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFEAKA 110
DP KP+ S++ F++ R+ +K++HP+ S K E+WK+++ EK FE A
Sbjct: 12 DPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMA 71
Query: 111 AKRKLDYEKLMTAY 124
K YE+ M Y
Sbjct: 72 KADKARYEREMKTY 85
>gi|296418046|ref|XP_002838655.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295634611|emb|CAZ82846.1| unnamed protein product [Tuber melanosporum]
Length = 103
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
KKDPN PKR SA+ F E R+ + ++P + A VGK GE+WK+L++ ++ P+EAK
Sbjct: 17 KKDPNAPKRGLSAYMFFANEQRENVRNDNPGI-AFGQVGKVLGERWKALSEKQRQPYEAK 75
Query: 110 AAKRKLDYEKLMTAYN 125
AA K YE AYN
Sbjct: 76 AAADKKRYEDEKAAYN 91
>gi|167396118|ref|XP_001741910.1| non-histone chromosomal protein [Entamoeba dispar SAW760]
gi|165893321|gb|EDR21615.1| non-histone chromosomal protein, putative [Entamoeba dispar SAW760]
Length = 111
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Query: 53 PNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAK 112
PN+PK+P SA+F++L E R K+EHP++K + + K E+WK+L + EK ++AKA
Sbjct: 23 PNRPKKPQSAYFLYLNEHRASIKEEHPDIK-FTEISKVASEQWKALGEEEKKEYQAKADA 81
Query: 113 RKLDYEKLMTAYNKK 127
+ Y+K M Y K
Sbjct: 82 AREQYKKDMEKYTGK 96
>gi|167384542|ref|XP_001736998.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165900416|gb|EDR26737.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 112
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Query: 53 PNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAK 112
PN+PKRP + +F++L E R K+EHP+ K V+ + K E+WK+L + EK ++AKA
Sbjct: 23 PNRPKRPQTPYFLYLHEHRASIKEEHPDAK-VTEIAKIASEQWKALGEEEKKEYQAKADA 81
Query: 113 RKLDYEKLMTAYNKK 127
K Y+K M Y K
Sbjct: 82 AKEQYKKDMEKYTGK 96
>gi|157820087|ref|NP_001102843.1| high mobility group box 1 like [Rattus norvegicus]
gi|149043247|gb|EDL96779.1| rCG50935 [Rattus norvegicus]
Length = 214
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F E+R K EHP + ++ V K GE W + +K P+E KA
Sbjct: 90 KDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKA 148
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + AY K
Sbjct: 149 AKLKEKYEKDIPAYRAK 165
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DP KP+ S++ F++ R+ +K++HP+ S K E+WK+++ EK FE
Sbjct: 2 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K YE+ M Y
Sbjct: 62 DMAKADKARYEREMKTY 78
>gi|332260744|ref|XP_003279440.1| PREDICTED: uncharacterized protein LOC100604184 [Nomascus
leucogenys]
Length = 414
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAG---GEKWKSLTDAEKAPF 106
KKDPN P+RP S FF+F EFR K +P + G GE WK+L D+EK P
Sbjct: 87 KKDPNAPQRPLSGFFLFCSEFRPKIKSTNPGKTGIFGFGDVAKKLGEMWKNLNDSEKQPH 146
Query: 107 EAKAAKRKLDYEK 119
+AAK K YEK
Sbjct: 147 ITQAAKLKEKYEK 159
Score = 38.9 bits (89), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
AK DP KPK SA+ F++ R+ +K+++P V + K E+WK++++ +K+ F
Sbjct: 2 AKGDPTKPKGKMSAYAFFVQTCREEHKKKNPKVPVNFAEFSKKCSERWKTISEKKKSEFN 61
Query: 108 AKAAKRKLDYEKLMTAYN 125
A K+ Y++ + Y
Sbjct: 62 ELAKADKVHYDQKIKDYG 79
>gi|296479353|tpg|DAA21468.1| TPA: high-mobility group box 1-like [Bos taurus]
Length = 215
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F E+R K EHP + ++ V K GE W + +K P+E KA
Sbjct: 90 KDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAVDDKQPYEKKA 148
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + AY K
Sbjct: 149 AKLKEKYEKDIAAYRAK 165
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DP KP+ S++ F++ R+ + ++HP+ S K E+WK+++ EK FE
Sbjct: 2 GKGDPKKPRGKMSSYAFFVQTCREEHTKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K YE+ M Y
Sbjct: 62 DMAKVDKARYEREMKTY 78
>gi|444323521|ref|XP_004182401.1| hypothetical protein TBLA_0I02240 [Tetrapisispora blattae CBS 6284]
gi|387515448|emb|CCH62882.1| hypothetical protein TBLA_0I02240 [Tetrapisispora blattae CBS 6284]
Length = 94
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
KKDPN PKR SA+ F E R + + E+P+V VGK GE+WK+L+ EK P+E K
Sbjct: 15 KKDPNAPKRALSAYMFFANETRDIVRSENPDV-TFGQVGKILGERWKALSAEEKVPYETK 73
Query: 110 AAKRKLDYEKLMTAYN 125
A K YE YN
Sbjct: 74 AEADKKRYESEKELYN 89
>gi|85000895|ref|XP_955166.1| high-mobility-group (HMG) protein [Theileria annulata strain
Ankara]
gi|65303312|emb|CAI75690.1| high-mobility-group (HMG) protein, putative [Theileria annulata]
Length = 94
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 56/93 (60%), Gaps = 1/93 (1%)
Query: 35 ASRSSNKRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNV-KAVSAVGKAGGE 93
AS+ + K K AKKDPN PKR S++ F +E R +++P++ + V+AVGK G
Sbjct: 2 ASKVAKSAGKKSKRAKKDPNAPKRALSSYMFFAKEKRAELVRDNPDLARDVAAVGKLVGA 61
Query: 94 KWKSLTDAEKAPFEAKAAKRKLDYEKLMTAYNK 126
W SL ++EKAP+E A + YEK AYNK
Sbjct: 62 AWNSLDESEKAPYEKLAEADRARYEKEKAAYNK 94
>gi|449269673|gb|EMC80424.1| High mobility group protein B1 [Columba livia]
Length = 209
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F EFR K EHP + ++ V K GE W + +K P+E KA
Sbjct: 90 KDPNAPKRPPSAFFLFCSEFRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKA 148
Query: 111 AKRKLDYEKL 120
AK K YEKL
Sbjct: 149 AKLKEKYEKL 158
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DP KP+ S++ F++ R+ +K++HP+ S K E+WK+++ EK FE
Sbjct: 2 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSSKEKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A KL YEK M Y
Sbjct: 62 DMAKADKLRYEKEMKNY 78
>gi|339046261|ref|NP_009647.2| Nhp6bp [Saccharomyces cerevisiae S288c]
gi|341942236|sp|P11633.3|NHP6B_YEAST RecName: Full=Non-histone chromosomal protein 6B
gi|4036|emb|CAA33378.1| unnamed protein product [Saccharomyces cerevisiae]
gi|45271022|gb|AAS56892.1| YBR089C-A [Saccharomyces cerevisiae]
gi|151946484|gb|EDN64706.1| nonhistone chromosomal protein [Saccharomyces cerevisiae YJM789]
gi|190408749|gb|EDV12014.1| 11 kDa nonhistone chromosomal protein [Saccharomyces cerevisiae
RM11-1a]
gi|256274037|gb|EEU08951.1| Nhp6bp [Saccharomyces cerevisiae JAY291]
gi|290878106|emb|CBK39165.1| Nhp6bp [Saccharomyces cerevisiae EC1118]
gi|333454471|tpg|DAA07210.2| TPA: Nhp6bp [Saccharomyces cerevisiae S288c]
Length = 99
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
KKDPN PKR SA+ F E R + + E+P+V VG+ GE+WK+LT EK P+E+K
Sbjct: 21 KKDPNAPKRGLSAYMFFANENRDIVRSENPDV-TFGQVGRILGERWKALTAEEKQPYESK 79
Query: 110 AAKRKLDYEKLMTAYN 125
A K YE YN
Sbjct: 80 AQADKKRYESEKELYN 95
>gi|145233003|ref|XP_001399874.1| non-histone chromosomal protein 6 [Aspergillus niger CBS 513.88]
gi|317026969|ref|XP_003188583.1| non-histone chromosomal protein 6 [Aspergillus niger CBS 513.88]
gi|134056796|emb|CAK37704.1| unnamed protein product [Aspergillus niger]
gi|350634700|gb|EHA23062.1| hypothetical protein ASPNIDRAFT_206990 [Aspergillus niger ATCC
1015]
Length = 103
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
KKDPN PKR SA+ F + R+ ++E+P + + VGK GE+WK+L+D ++ P+E K
Sbjct: 19 KKDPNAPKRGLSAYMFFANDNREKVREENPGI-SFGQVGKMLGERWKALSDTDRRPYEEK 77
Query: 110 AAKRKLDYEKLMTAYN 125
AA K YE +YN
Sbjct: 78 AAADKKRYEDEKASYN 93
>gi|1870104|emb|CAA85042.1| NHP6B [Saccharomyces cerevisiae]
Length = 99
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
KKDPN PKR SA+ F E R + + E+P+V VG+ GE+WK+LT EK P+E+K
Sbjct: 21 KKDPNAPKRRLSAYMFFANENRDIVRSENPDV-TFGQVGRILGERWKALTAEEKQPYESK 79
Query: 110 AAKRKLDYEKLMTAYN 125
A K YE YN
Sbjct: 80 AQADKKRYESEKELYN 95
>gi|112491006|pdb|2GZK|A Chain A, Structure Of A Complex Of Tandem Hmg Boxes And Dna
Length = 159
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F E+R K EHP + ++ V K GE W + +K P+E KA
Sbjct: 84 KDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKA 142
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + AY K
Sbjct: 143 AKLKEKYEKDIAAYRAK 159
Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 57 KRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAK 112
KRP +AF V+ + R+ E+P ++ S + K G +WK LT+AEK PF +A K
Sbjct: 6 KRPMNAFIVWSRDQRRKMALENPRMRN-SEISKQLGYQWKMLTEAEKWPFFQEAQK 60
>gi|444518919|gb|ELV12461.1| High mobility group protein B3 [Tupaia chinensis]
Length = 185
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
K+DPN PKRPPS FF+F EF + +P + ++ V K GE W + +D+EK P+ K
Sbjct: 87 KRDPNAPKRPPSGFFLFCSEFCPKIRSNNPGI-SIGDVAKKLGEMWNNKSDSEKQPYNTK 145
Query: 110 AAKRKLDYEKLMTAYNKK 127
A KL YEK + Y K
Sbjct: 146 AT--KLKYEKDVADYKSK 161
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 61 SAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKLDYEK 119
SA+ F++ R+ +K+++P V + K G E+WK+++ EK+ F+ A K+ Y++
Sbjct: 14 SAYTFFVQTCREKHKKKNPEVPVKFAEFSKKGSERWKTMSGKEKSKFDEMAKVNKVHYDR 73
Query: 120 LMTAY 124
M Y
Sbjct: 74 EMKDY 78
>gi|45187563|ref|NP_983786.1| ADL310Wp [Ashbya gossypii ATCC 10895]
gi|74694642|sp|Q75B82.1|NHP6_ASHGO RecName: Full=Non-histone chromosomal protein 6
gi|44982301|gb|AAS51610.1| ADL310Wp [Ashbya gossypii ATCC 10895]
gi|374106998|gb|AEY95906.1| FADL310Wp [Ashbya gossypii FDAG1]
Length = 94
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKR SA+ F E R + + E+P + + VG+ GEKWK+L+D EK P+EAKA
Sbjct: 17 DPNAPKRAMSAYMFFANENRDIVRAENPGI-SFGQVGRVLGEKWKALSDDEKQPYEAKAE 75
Query: 112 KRKLDYEKLMTAYN 125
K YE YN
Sbjct: 76 ADKKRYESEKELYN 89
>gi|363755760|ref|XP_003648095.1| hypothetical protein Ecym_7459 [Eremothecium cymbalariae
DBVPG#7215]
gi|356892131|gb|AET41278.1| hypothetical protein Ecym_7459 [Eremothecium cymbalariae
DBVPG#7215]
Length = 94
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKR SA+ F E R + + E+P + + VG+ GEKWK+L+D EK P+EAKA
Sbjct: 17 DPNAPKRAMSAYMFFANENRDIVRAENPGI-SFGQVGRVLGEKWKALSDDEKQPYEAKAE 75
Query: 112 KRKLDYEKLMTAYN 125
K YE YN
Sbjct: 76 ADKKRYESEKELYN 89
>gi|302309760|ref|XP_002999554.1| hypothetical protein [Candida glabrata CBS 138]
gi|196049084|emb|CAR57991.1| unnamed protein product [Candida glabrata]
Length = 93
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
KKDPN PKR SA+ F E R + + E+P+V +G+ GE+WK+LT +K P+EAK
Sbjct: 15 KKDPNAPKRALSAYMFFANENRDIVRSENPDV-TFGQIGRLLGERWKALTAEDKQPYEAK 73
Query: 110 AAKRKLDYEKLMTAYN 125
A K YE YN
Sbjct: 74 AEADKKRYESEKELYN 89
>gi|242781691|ref|XP_002479852.1| nucleosome binding protein (Nhp6a), putative [Talaromyces
stipitatus ATCC 10500]
gi|242781695|ref|XP_002479853.1| nucleosome binding protein (Nhp6a), putative [Talaromyces
stipitatus ATCC 10500]
gi|242781700|ref|XP_002479854.1| nucleosome binding protein (Nhp6a), putative [Talaromyces
stipitatus ATCC 10500]
gi|218719999|gb|EED19418.1| nucleosome binding protein (Nhp6a), putative [Talaromyces
stipitatus ATCC 10500]
gi|218720000|gb|EED19419.1| nucleosome binding protein (Nhp6a), putative [Talaromyces
stipitatus ATCC 10500]
gi|218720001|gb|EED19420.1| nucleosome binding protein (Nhp6a), putative [Talaromyces
stipitatus ATCC 10500]
Length = 103
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
KKDPN PKR SA+ F E R+ + E+P + A A+G+ GE WK L+DAE+ P+E K
Sbjct: 19 KKDPNAPKRGLSAYMFFANENRERVRDENPGI-AFGALGRKLGELWKGLSDAERKPYEDK 77
Query: 110 AAKRKLDYEKLMTAY 124
AA K YE +Y
Sbjct: 78 AAADKKRYEDQKASY 92
>gi|453083241|gb|EMF11287.1| HMG_box-domain-containing protein [Mycosphaerella populorum SO2202]
Length = 109
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
KKDPN PKR SA+ F + R ++++P +K VGK GE+WK+L + +KAP+EAK
Sbjct: 24 KKDPNMPKRGLSAYMFFANDTRDKVREDNPGIK-FGEVGKLLGERWKALNEKQKAPYEAK 82
Query: 110 AAKRKLDYEKLMTAYN 125
AA K YE+ AY
Sbjct: 83 AAADKKRYEEEKAAYT 98
>gi|426232480|ref|XP_004010250.1| PREDICTED: high mobility group protein B1-like [Ovis aries]
Length = 201
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F E+R K EHP + +V V K G+ W + +K P+E KA
Sbjct: 90 KDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SVGDVAKKLGQMWNNTAADDKQPYEKKA 148
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + AY K
Sbjct: 149 AKLKEKYEKDIAAYRAK 165
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K +P KP+ S++ F++ R+ K++HP+ S K E+WK+++ EK FE
Sbjct: 2 GKGEPKKPRGKMSSYAFFVQTCREERKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K YE+ M Y
Sbjct: 62 DMAKADKARYEREMKTY 78
>gi|212526742|ref|XP_002143528.1| nucleosome binding protein (Nhp6a), putative [Talaromyces marneffei
ATCC 18224]
gi|212526744|ref|XP_002143529.1| nucleosome binding protein (Nhp6a), putative [Talaromyces marneffei
ATCC 18224]
gi|210072926|gb|EEA27013.1| nucleosome binding protein (Nhp6a), putative [Talaromyces marneffei
ATCC 18224]
gi|210072927|gb|EEA27014.1| nucleosome binding protein (Nhp6a), putative [Talaromyces marneffei
ATCC 18224]
Length = 103
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 45 NVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKA 104
V+ KKDPN PKR SA+ F E R+ + E+P + A A+G+ GE WK L+D+E+
Sbjct: 14 GVEKRKKDPNAPKRGLSAYMFFANENRERVRDENPGI-AFGALGRKLGELWKGLSDSERK 72
Query: 105 PFEAKAAKRKLDYEKLMTAY 124
P+E KAA K YE Y
Sbjct: 73 PYEDKAAADKKRYEDQKATY 92
>gi|225703820|gb|ACO07756.1| High mobility group protein B1 [Oncorhynchus mykiss]
Length = 193
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN KRPPSAFF+F +FR K EHP + ++ K G W S EK P+E KA
Sbjct: 89 KDPNALKRPPSAFFIFCADFRAKIKSEHPGL-SIGDTAKKLGVMWNSSAAEEKKPYEKKA 147
Query: 111 AKRKLDYEKLMTAY 124
A K Y+K + +Y
Sbjct: 148 ATLKEKYDKDIASY 161
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFEAK 109
KDP KP+ S++ F++ R +K++ P + K E+WK ++ EK FE
Sbjct: 3 KDPRKPRGKMSSYAYFVQTCRAEHKKKQPEASVNFAEFSKKCSERWKPMSPKEKGTFEDM 62
Query: 110 AAKRKLDYEKLMTAY 124
A + K+ YE+ M Y
Sbjct: 63 AKQDKVRYEREMKNY 77
>gi|224080027|ref|XP_002305996.1| high mobility group family [Populus trichocarpa]
gi|222848960|gb|EEE86507.1| high mobility group family [Populus trichocarpa]
Length = 165
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 50/68 (73%)
Query: 60 PSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKLDYEK 119
P+AFF FLE+FRK +++++P+VK++ VGKA GEKWK++T EK + A +++ ++++
Sbjct: 81 PTAFFYFLEDFRKEFQEQNPDVKSMREVGKACGEKWKTMTYEEKVKYYDIATEKRAEFDR 140
Query: 120 LMTAYNKK 127
+ Y K+
Sbjct: 141 ATSEYIKR 148
>gi|159162414|pdb|1HME|A Chain A, Structure Of The Hmg Box Motif In The B-Domain Of Hmg1
gi|159162415|pdb|1HMF|A Chain A, Structure Of The Hmg Box Motif In The B-Domain Of Hmg1
Length = 77
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F E+R K EHP + ++ V K GE W + +K P+E KA
Sbjct: 2 KDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKA 60
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + AY K
Sbjct: 61 AKLKEKYEKDIAAYRAK 77
>gi|402882719|ref|XP_003904882.1| PREDICTED: putative high mobility group protein B3-like
protein-like [Papio anubis]
Length = 132
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
K DPN PKRP S FF+F EF K +P + ++ V K GE WK+L D+EK P+ K
Sbjct: 24 KNDPNAPKRPLSGFFLFCSEFHPKMKSTNPGI-SIGDVAKKLGEMWKNLNDSEKQPYVTK 82
Query: 110 AAKRKLDYEKLMTAYNKK 127
AK + YEK + Y K
Sbjct: 83 VAKL-MKYEKDVADYKSK 99
>gi|392879586|gb|AFM88625.1| high mobility group protein [Callorhinchus milii]
Length = 226
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKRPPS FF+F R ++E P + ++ + K GEKW ++ EK P+E +A
Sbjct: 107 DPNAPKRPPSGFFIFSAHLRPKIREECPGL-SIGDIAKKLGEKWNAMGSEEKLPYEQQAD 165
Query: 112 KRKLDYEKLMTAYNKK 127
K K Y+K + AY K
Sbjct: 166 KLKEKYKKDVAAYRAK 181
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPN-VKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
+DP KP+ +++ +F++ R+ +K++HP V + + K E+WK+++ EK+ FE
Sbjct: 19 RDPKKPRGRLTSYALFVQTCREEHKKKHPEKVVSFTEFSKKCSERWKTMSAKEKSKFEEL 78
Query: 110 AAKRKLDYEKLMTAY 124
+ + K YE M Y
Sbjct: 79 SKEDKKRYESEMKDY 93
>gi|426244704|ref|XP_004016160.1| PREDICTED: high mobility group protein B1-like [Ovis aries]
Length = 203
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F E+R K EHP + ++ V K G+ W + +K P+E KA
Sbjct: 90 KDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGQMWNNTAADDKQPYEKKA 148
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + AY K
Sbjct: 149 AKLKEKYEKDIAAYRAK 165
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DP KP+ S++ F++ R+ +K++HP+ S K E+WK+++ EK FE
Sbjct: 2 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K YE+ M Y
Sbjct: 62 DMAKADKARYEREMKTY 78
>gi|358372276|dbj|GAA88880.1| nucleosome binding protein (Nhp6a) [Aspergillus kawachii IFO 4308]
Length = 104
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
KKDPN PKR SA+ F + R+ ++E+P + + VGK GE+WK+L+D ++ P+E K
Sbjct: 20 KKDPNAPKRGLSAYMFFANDNREKVREENPGI-SFGQVGKMLGERWKALSDTDRRPYEEK 78
Query: 110 AAKRKLDYEKLMTAYN 125
AA K YE +YN
Sbjct: 79 AAADKKRYEDEKASYN 94
>gi|392876654|gb|AFM87159.1| high mobility group protein [Callorhinchus milii]
Length = 226
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKRPPS FF+F R ++E P + ++ + K GEKW ++ EK P+E +A
Sbjct: 107 DPNAPKRPPSGFFIFSAHLRPKIREECPGL-SIGDIAKKLGEKWNAMGSEEKLPYEQQAD 165
Query: 112 KRKLDYEKLMTAYNKK 127
K K Y+K + AY K
Sbjct: 166 KLKEKYKKDVAAYRAK 181
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPN-VKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
+DP KP+ +++ +F++ R+ +K++HP V + + K E WK+++ EK+ FE
Sbjct: 19 RDPKKPRGRLTSYALFVQTCREEHKKKHPEKVVSFTEFSKKCSEGWKTMSAKEKSKFEEL 78
Query: 110 AAKRKLDYEKLMTAY 124
+ + K YE M Y
Sbjct: 79 SKEDKKRYESEMKDY 93
>gi|387914724|gb|AFK10971.1| high mobility group box 1 [Callorhinchus milii]
Length = 226
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKRPPS FF+F R ++E P + ++ + K GEKW ++ EK P+E +A
Sbjct: 107 DPNAPKRPPSGFFIFSAHLRPKIREECPGL-SIGDIAKKLGEKWNAMGSEEKLPYEQQAD 165
Query: 112 KRKLDYEKLMTAYNKK 127
K K Y+K + AY K
Sbjct: 166 KLKEKYKKDVAAYRAK 181
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPN-VKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
+DP KP+ ++ +F++ R+ +K++HP V + + K E+WK+++ EK+ FE
Sbjct: 19 RDPKKPRGRLTSHALFVQTCREEHKKKHPEKVVSFTEFSKKCSERWKTMSAKEKSKFEEL 78
Query: 110 AAKRKLDYEKLMTAY 124
+ + K YE M Y
Sbjct: 79 SKEDKKRYESEMKDY 93
>gi|426236473|ref|XP_004012193.1| PREDICTED: high mobility group protein B1-like [Ovis aries]
Length = 201
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F E+R K EHP + ++ V K G+ W + +K P+E KA
Sbjct: 90 KDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGQMWNNTAADDKQPYEKKA 148
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + AY K
Sbjct: 149 AKLKEKYEKDIAAYRAK 165
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DP KP+ S++ F++ R+ +K++HP+ S K E+WK+++ EK FE
Sbjct: 2 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K YE+ M Y
Sbjct: 62 DMAKADKARYEREMKTY 78
>gi|355565174|gb|EHH21663.1| hypothetical protein EGK_04785, partial [Macaca mulatta]
Length = 201
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F E+R K EHP + ++ VGK GE W +K P+E
Sbjct: 90 KDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVGKKPGEMWNDTAADDKHPYEKDI 148
Query: 111 AKRKLDYEKLM 121
KL E LM
Sbjct: 149 VHIKLK-ESLM 158
Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DP K + SA F++ K +KQ+HP S + E+WK +T EK FE
Sbjct: 2 GKGDPKKLRGKMSAHAFFVQTCWKEHKQQHPAASVNFSEFSQKCLERWKIMTAKEKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
K YE+ M Y
Sbjct: 62 DMPKADKAHYEREMKTY 78
>gi|355691926|gb|EHH27111.1| hypothetical protein EGK_17228 [Macaca mulatta]
Length = 196
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
D N PKRPPS FF+F EF K +P + ++ + K GE WK+L D+EK P+ KAA
Sbjct: 76 DSNAPKRPPSGFFLFSSEFCPKMKSTNPGI-SIGDMVKKLGEMWKNLNDSEKQPYITKAA 134
Query: 112 KRKLDYEK 119
K K YEK
Sbjct: 135 KLKEKYEK 142
>gi|365762037|gb|EHN03653.1| Nhp6bp [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|401841847|gb|EJT44170.1| NHP6B-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 102
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
KKDPN PKR SA+ F E R + + E+P+V VG+ GEKWK+LT +K P+E+K
Sbjct: 24 KKDPNAPKRGLSAYMFFANENRDIVRSENPDV-TFGQVGRILGEKWKALTAEDKQPYESK 82
Query: 110 AAKRKLDYEKLMTAYN 125
A K YE YN
Sbjct: 83 AQADKKRYESEKELYN 98
>gi|50304233|ref|XP_452066.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74636989|sp|Q6CVH3.1|NHP6_KLULA RecName: Full=Non-histone chromosomal protein 6
gi|49641198|emb|CAH02459.1| KLLA0B12056p [Kluyveromyces lactis]
Length = 93
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
KKDPN PKR SA+ F E R + + E+P + VG+ GEKWK+L + EKAP+EAK
Sbjct: 12 KKDPNAPKRALSAYMFFANENRDIVRAENPGI-TFGQVGRILGEKWKALNEDEKAPYEAK 70
Query: 110 AAKRKLDYE 118
A K YE
Sbjct: 71 AEADKKRYE 79
>gi|389626627|ref|XP_003710967.1| non-histone chromosomal protein 6 [Magnaporthe oryzae 70-15]
gi|78192124|gb|ABB30152.1| nonhistone protein 6 [Magnaporthe grisea]
gi|291195731|gb|ADD84582.1| nonhistone chromosomal protein 6B [Magnaporthe oryzae]
gi|351650496|gb|EHA58355.1| non-histone chromosomal protein 6 [Magnaporthe oryzae 70-15]
gi|440463464|gb|ELQ33044.1| nucleosome binding protein [Magnaporthe oryzae Y34]
gi|440481294|gb|ELQ61893.1| nucleosome binding protein [Magnaporthe oryzae P131]
Length = 101
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEA 108
AKKDP PKR SA+ F E R ++E+P V VGK GE+WK+L+D ++AP++A
Sbjct: 17 AKKDPMAPKRGLSAYMFFANEQRDNVREENPGV-TFGQVGKILGERWKALSDKQRAPYDA 75
Query: 109 KAAKRKLDYEKLMTAYN 125
KAA K YE AY
Sbjct: 76 KAAADKKRYEDEKAAYQ 92
>gi|335308835|ref|XP_003361389.1| PREDICTED: high mobility group protein B4-like [Sus scrofa]
Length = 198
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
K+DP P+RPPS+F +F ++ K+E+PN +V+ V KA W + TD +K P+E +
Sbjct: 89 KRDPQAPRRPPSSFLLFCQDNYAQLKRENPNW-SVAQVAKASARMWSTTTDVDKQPYEQR 147
Query: 110 AAKRKLDYEKLMTAYNKK 127
AA + Y + ++ Y K+
Sbjct: 148 AALLRAKYHEELSVYQKQ 165
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Query: 55 KPKRPPSAFFVFLEEFRKVYKQEHPNVK-AVSAVGKAGGEKWKSLTDAEKAPFEAKAAKR 113
KPK S++ FL + +K++ PN + EKW+S++ EKA +EA A
Sbjct: 10 KPKANVSSYIHFLLNYSNKFKEQQPNTYLGFKEFSRKCSEKWRSISKHEKAKYEALAKLD 69
Query: 114 KLDYEKLMTAY 124
K Y++ M Y
Sbjct: 70 KARYQEEMRNY 80
>gi|110766132|ref|XP_001120264.1| PREDICTED: FACT complex subunit Ssrp1 [Apis mellifera]
Length = 728
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 48/75 (64%), Gaps = 3/75 (4%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
+KD NKPKRPP+AF ++L R+ K E+P + AV+ + K GGE W+ L D K+ +E K
Sbjct: 543 EKDTNKPKRPPTAFMMWLNSARERIKAENPGI-AVTEIAKKGGEMWRELKD--KSEWEQK 599
Query: 110 AAKRKLDYEKLMTAY 124
AAK K DY M Y
Sbjct: 600 AAKAKKDYSASMKEY 614
>gi|410955200|ref|XP_003984245.1| PREDICTED: high mobility group protein B2-like [Felis catus]
Length = 329
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 54 NKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKR 113
N PKRPPSAFF+F E R K EHP + + + K GE W + +K P+E KAAK
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGL-PIGDIAKKLGEMWSEQSAKDKQPYEQKAAKL 151
Query: 114 KLDYEKLMTAYNKK 127
K Y K + AY K
Sbjct: 152 KEKYGKDIAAYRTK 165
Score = 42.0 bits (97), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DP+KP+ S++ F++ R+ +K++HP+ + K E+WK++++ EK+ FE
Sbjct: 2 GKGDPSKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSEKEKSKFE 61
Query: 108 AKAAKRKLDYEKLM 121
A K Y++ M
Sbjct: 62 DMAKSDKARYDREM 75
>gi|300677968|gb|ADK27291.1| high-mobility-group B1b [Gekko japonicus]
Length = 215
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKRPPSAFF+F E+R K EHP + ++ V K GE W + +K P+E KAA
Sbjct: 91 DPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKAA 149
Query: 112 KRKLDYEKLMTAYNKK 127
K K YEK + AY K
Sbjct: 150 KLKEKYEKDIAAYRAK 165
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DP KP+ S++ F++ R+ +K++HP+ S K E+WK+++ EK FE
Sbjct: 2 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K YE+ M Y
Sbjct: 62 DMAKADKARYEREMKTY 78
>gi|392876858|gb|AFM87261.1| high mobility group protein [Callorhinchus milii]
gi|392878442|gb|AFM88053.1| high mobility group protein [Callorhinchus milii]
gi|392880194|gb|AFM88929.1| high mobility group protein [Callorhinchus milii]
gi|392881188|gb|AFM89426.1| high mobility group protein [Callorhinchus milii]
Length = 226
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKRPPS FF+F R ++E P + ++ + K GEKW ++ EK P+E +A
Sbjct: 107 DPNAPKRPPSGFFIFSAHLRPKIREECPGL-SIGDIAKKLGEKWNAMGSEEKLPYEQQAD 165
Query: 112 KRKLDYEKLMTAYNKK 127
K K Y+K + AY K
Sbjct: 166 KLKEKYKKDVAAYRAK 181
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPN-VKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
+DP KP+ +++ +F++ R+ +K++HP V + + K E+WK+++ EK+ FE
Sbjct: 19 RDPKKPRGRLTSYALFVQTCREEHKKKHPEKVVSFTEFSKKCSERWKTMSAKEKSKFEEL 78
Query: 110 AAKRKLDYEKLMTAY 124
+ + K YE M Y
Sbjct: 79 SKEDKKRYESEMKDY 93
>gi|384246550|gb|EIE20040.1| hypothetical protein COCSUDRAFT_83556 [Coccomyxa subellipsoidea
C-169]
Length = 140
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 47/78 (60%)
Query: 47 KSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPF 106
+ AKK + P+RP SA+ F+ EFR+ +K +HP V VS VG A GE W+SLT +KA +
Sbjct: 11 RRAKKPKDAPRRPKSAYMFFMAEFREKWKVDHPEVNRVSDVGVAAGEAWRSLTPEQKAVY 70
Query: 107 EAKAAKRKLDYEKLMTAY 124
E ++ K Y + Y
Sbjct: 71 EEQSVGSKATYAAEIAEY 88
>gi|392884154|gb|AFM90909.1| high mobility group protein [Callorhinchus milii]
Length = 226
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKRPPS FF+F R ++E P + ++ + K GEKW ++ EK P+E +A
Sbjct: 107 DPNAPKRPPSGFFIFSAHLRPKIREECPGL-SIGDIAKKLGEKWNAMGSEEKLPYEQQAD 165
Query: 112 KRKLDYEKLMTAYNKK 127
K K Y+K + AY K
Sbjct: 166 KLKEKYKKDVAAYRAK 181
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPN-VKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
+DP KP+ +++ +F++ R+ +K++HP V + + K E+W++++ EK+ FE
Sbjct: 19 RDPKKPRGRLTSYALFVQTCREEHKKKHPEKVVSFTEFSKKCSERWETMSAKEKSKFEEL 78
Query: 110 AAKRKLDYEKLMTAY 124
+ + K YE M Y
Sbjct: 79 SKEDKKRYESEMKDY 93
>gi|392878936|gb|AFM88300.1| high mobility group protein [Callorhinchus milii]
Length = 226
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKRPPS FF+F R ++E P + ++ + K GEKW ++ EK P+E +A
Sbjct: 107 DPNAPKRPPSGFFIFSAHLRPKIREECPGL-SIGDIAKKLGEKWNAMGSEEKLPYEQQAD 165
Query: 112 KRKLDYEKLMTAYNKK 127
K K Y+K + AY K
Sbjct: 166 KLKEKYKKDVAAYRAK 181
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPN-VKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
+DP KP+ +++ +F++ R+ +K++HP V + + K E+WK+++ EK+ FE
Sbjct: 19 RDPKKPRGRLTSYALFVQTCREEHKKKHPEKVVSFTEFSKKCSERWKTMSAKEKSKFEEL 78
Query: 110 AAKRKLDYEKLMTAY 124
+ + K YE M Y
Sbjct: 79 SKEDKKRYESEMKDY 93
>gi|448084218|ref|XP_004195549.1| Piso0_004944 [Millerozyma farinosa CBS 7064]
gi|359376971|emb|CCE85354.1| Piso0_004944 [Millerozyma farinosa CBS 7064]
Length = 92
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
KKDP+ PKR SA+ F E R + + E+P + + VGK GEKWK++T +K P+E+K
Sbjct: 13 KKDPDAPKRSLSAYMFFANENRDIVRAENPGI-SFGQVGKLLGEKWKAMTSDDKTPYESK 71
Query: 110 AAKRKLDYEKLMTAYNKK 127
A K YEK Y KK
Sbjct: 72 AEADKKRYEKEKAEYAKK 89
>gi|149628522|ref|XP_001521757.1| PREDICTED: high mobility group protein B2-like, partial
[Ornithorhynchus anatinus]
Length = 106
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKRPPSAFF+F E R K EHP + ++ K GE W + +K P+E KAA
Sbjct: 40 DPNAPKRPPSAFFLFCSEQRPKIKSEHPGL-SIGDTAKKLGELWSEQSAKDKLPYEQKAA 98
Query: 112 KRKLDYEK 119
K K YEK
Sbjct: 99 KLKEKYEK 106
>gi|148701877|gb|EDL33824.1| mCG140646 [Mus musculus]
Length = 207
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F E+ K EHP + V V K GE W + +K P+E KA
Sbjct: 91 KDPNAPKRPPSAFFLFCSEYHPKIKGEHPGL-CVGDVAKKLGELWNNTAGDDKQPYEKKA 149
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + AY K
Sbjct: 150 AKLKEKYEKDIAAYRAK 166
Score = 40.4 bits (93), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DP KP+ S++ F++ R+ +K++HP+ S K E+WK+++ EK E
Sbjct: 2 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKCE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K YE+ M Y
Sbjct: 62 DMAKADKARYEREMKTY 78
>gi|307105669|gb|EFN53917.1| hypothetical protein CHLNCDRAFT_136125 [Chlorella variabilis]
Length = 101
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 57/99 (57%), Gaps = 1/99 (1%)
Query: 29 RKAVLKASRSSNKRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVG 88
+KA KA +S K + +KDPN PKRP SA+ F + R K+ P++ ++ VG
Sbjct: 4 KKAAEKAGKSPKKAPAKKEKKEKDPNAPKRPLSAYMYFASDKRVEMKKSDPSL-SLGEVG 62
Query: 89 KAGGEKWKSLTDAEKAPFEAKAAKRKLDYEKLMTAYNKK 127
KA G WK L+D EK P++ KA K K YEK AY KK
Sbjct: 63 KATGAAWKELSDKEKEPYQKKADKDKARYEKEKAAYEKK 101
>gi|148696675|gb|EDL28622.1| mCG11166 [Mus musculus]
Length = 160
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 54 NKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKR 113
N PKRPPSAFF+F E R K EHP + ++ K GE W + +K P+E KAAK
Sbjct: 43 NAPKRPPSAFFLFCSENRPKIKIEHPGL-SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 101
Query: 114 KLDYEKLMTAYNKK 127
K YEK + AY K
Sbjct: 102 KEKYEKDIAAYRAK 115
>gi|444510699|gb|ELV09703.1| High mobility group protein B2 [Tupaia chinensis]
Length = 233
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 40/75 (53%)
Query: 53 PNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAK 112
PN PKRPPSAFF+F E K EHP + K GE W + +K P E KAAK
Sbjct: 92 PNVPKRPPSAFFLFCSEHHPKIKSEHPGLSIGDTEKKKLGEMWSEQSAKDKQPCEQKAAK 151
Query: 113 RKLDYEKLMTAYNKK 127
K YEK + AY K
Sbjct: 152 LKKKYEKDIAAYRAK 166
Score = 38.9 bits (89), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K D NKP+ S++ F++ + +K++HP+ + K EKWK+++ EK+ FE
Sbjct: 2 GKGDHNKPRGKMSSYAFFVQTCGEEHKKKHPDSSVNFAEFSKKCSEKWKAMSAKEKSKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K Y++ M Y
Sbjct: 62 DMAKSDKARYDREMKNY 78
>gi|397524101|ref|XP_003832048.1| PREDICTED: putative high mobility group protein B3-like
protein-like [Pan paniscus]
Length = 130
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 47 KSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPF 106
K K DPN PKRP S FF+F EF K +P + ++ V K GE W +L D+EK P+
Sbjct: 20 KGGKNDPNAPKRPLSGFFLFCSEFCPKIKSTNPGI-SIGDVAKKLGEMWNNLNDSEKQPY 78
Query: 107 EAKAAKRKLDYEKLMTAYNKK 127
K AK K YEK + Y K
Sbjct: 79 VTKVAKLK-KYEKDVADYKSK 98
>gi|443684506|gb|ELT88434.1| hypothetical protein CAPTEDRAFT_172235 [Capitella teleta]
Length = 734
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 46/73 (63%), Gaps = 3/73 (4%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPNKPKRP SA+F++L E R+ K E+P+ V+ + K G++WK +TD K +E A
Sbjct: 546 DPNKPKRPQSAYFLWLNEMREEIKAENPDA-GVTDIAKLAGQRWKEVTD--KTRWEGLAV 602
Query: 112 KRKLDYEKLMTAY 124
K K YEK M Y
Sbjct: 603 KAKESYEKAMEEY 615
>gi|348541671|ref|XP_003458310.1| PREDICTED: high mobility group-T protein-like [Oreochromis
niloticus]
Length = 206
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKRPPSAFF+F EFR K E P + ++ V K GE W S +K P+E KAA
Sbjct: 91 DPNAPKRPPSAFFIFCSEFRPKVKGESPGL-SIGDVAKRLGEMWNSTAAEDKQPYEKKAA 149
Query: 112 KRKLDYEKLMTAYNKK 127
K K YEK + AY K
Sbjct: 150 KLKEKYEKDIAAYRAK 165
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFEAK 109
KDP KP+ S++ F++ R+ +K++HP + K E+WK+++ EK FE
Sbjct: 3 KDPTKPRGKMSSYAYFVQTCREEHKKKHPEASVNFAEFSKKCSERWKTMSAKEKGKFEDM 62
Query: 110 AAKRKLDYEKLMTAY 124
A + K YE+ M Y
Sbjct: 63 ARQDKARYEREMMNY 77
>gi|62660600|ref|XP_573625.1| PREDICTED: high mobility group protein B2-like [Rattus norvegicus]
gi|392333089|ref|XP_003752789.1| PREDICTED: high mobility group protein B2-like [Rattus norvegicus]
Length = 209
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 56 PKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKL 115
PKRPPSAFF+F E R K EHP + ++ K GE W + +K P+E KAAK K
Sbjct: 95 PKRPPSAFFLFCSEHRPKIKSEHPGL-SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKE 153
Query: 116 DYEKLMTAYNKK 127
YEK + AY K
Sbjct: 154 KYEKDIAAYRAK 165
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DPNKP+ S + F++ R+ +K++HP+ + K E+WK+++ EK+ FE
Sbjct: 2 GKGDPNKPRGKMSLYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K Y++ M Y
Sbjct: 62 DLAKSDKARYDREMKNY 78
>gi|297665615|ref|XP_002811141.1| PREDICTED: high mobility group protein B4 [Pongo abelii]
Length = 189
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Query: 44 KNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEK 103
K K K+DP P+RPPS+F +F ++ K+E+PN V V KA G+ W + TD EK
Sbjct: 81 KTKKRRKRDPQAPRRPPSSFLLFCQDHYAQLKRENPNWSVVQ-VAKATGKMWSAATDLEK 139
Query: 104 APFEAKAAKRKLDYEKLMTAYNKKQ 128
P+E +AA + Y + + Y K++
Sbjct: 140 HPYEQRAALLRAKYFEELELYRKQR 164
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 55 KPKRPPSAFFVFLEEFRKVYKQEHPNVK-AVSAVGKAGGEKWKSLTDAEKAPFEAKAAKR 113
KPK S++ FL +R +K++ PN + EKW+S++ EKA +EA A
Sbjct: 8 KPKANVSSYVHFLLNYRNKFKEQQPNTYVGFEEFSRKCSEKWRSISKHEKAKYEALAKLD 67
Query: 114 KLDYEKLMTAY 124
K Y++ M Y
Sbjct: 68 KARYQEEMMNY 78
>gi|444722479|gb|ELW63171.1| High mobility group protein B2 [Tupaia chinensis]
Length = 147
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 53 PNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAK 112
PN PKRPPSAFF+F E K EHP + ++ K GE W + +K P E KAAK
Sbjct: 30 PNTPKRPPSAFFLFCSEHLPKIKSEHPGL-SIGDTAKKLGEMWSEQSAKDKQPCEQKAAK 88
Query: 113 RKLDYEKLMTAYNKK 127
K YEK + AY K
Sbjct: 89 LKEKYEKDIAAYRAK 103
>gi|91091374|ref|XP_973014.1| PREDICTED: similar to AGAP012335-PA [Tribolium castaneum]
Length = 712
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 47/74 (63%), Gaps = 3/74 (4%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KD NKPKRP +AF ++L E R K ++P +K ++ + K GGE WK L D K+ +E KA
Sbjct: 548 KDENKPKRPSTAFMLWLNEMRDKIKADNPGIK-ITEIAKKGGEMWKELKD--KSEWEGKA 604
Query: 111 AKRKLDYEKLMTAY 124
AK K +Y K M Y
Sbjct: 605 AKAKEEYNKAMKEY 618
>gi|74153177|dbj|BAB27638.3| unnamed protein product [Mus musculus]
Length = 191
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 54 NKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKR 113
N PKRPPSAFF+F E R K EHP + ++ K GE W + +K P+E KAAK
Sbjct: 93 NAPKRPPSAFFLFCSENRPKIKIEHPGL-SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 151
Query: 114 KLDYEKLMTAYNKK 127
K YEK + AY K
Sbjct: 152 KEKYEKDIAAYRAK 165
Score = 44.3 bits (103), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DPNKP+ S++ F++ R+ +K++HP+ + K E+WK+++ EK+ FE
Sbjct: 2 GKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K Y++ M Y
Sbjct: 62 DLAKSDKARYDREMKNY 78
>gi|255537735|ref|XP_002509934.1| transcription factor, putative [Ricinus communis]
gi|223549833|gb|EEF51321.1| transcription factor, putative [Ricinus communis]
Length = 514
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 47/76 (61%), Gaps = 3/76 (3%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DP KPK+P SAFF+F E R E+ NV+ V K GE+WK++T+ +K P+E A
Sbjct: 307 DPLKPKQPMSAFFLFSNERRASLLAENKNVREV---AKIAGEQWKNMTEEQKGPYEEMAK 363
Query: 112 KRKLDYEKLMTAYNKK 127
+ KL Y + M AY +K
Sbjct: 364 RNKLRYMQEMEAYKQK 379
Score = 55.5 bits (132), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPNKPK+P S+F +F +E RK QE P + S + KWK L++ E+ + AKAA
Sbjct: 432 DPNKPKKPASSFLIFSKEARKNLAQERPVINN-STLNALISVKWKELSEEERQIWNAKAA 490
Query: 112 KRKLDYEKLMTAYNK 126
+ Y+K M YNK
Sbjct: 491 EAMEIYKKEMEEYNK 505
>gi|403300479|ref|XP_003940964.1| PREDICTED: high mobility group protein B1-like [Saimiri boliviensis
boliviensis]
Length = 215
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F E+R K EHP + ++ V K G+ W + +K P+E KA
Sbjct: 90 KDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGKMWNNTAANDKQPYEKKA 148
Query: 111 AKRKLDYEKLMTAY 124
AK K YEK + AY
Sbjct: 149 AKLKEKYEKDIAAY 162
Score = 42.7 bits (99), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DP KP+ S+ F++ R+ +K++HP+ S K E+WK+++ EK FE
Sbjct: 2 GKGDPKKPRGKMSSCAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K YE+ M Y
Sbjct: 62 DMAKVDKACYEREMKTY 78
>gi|444729825|gb|ELW70228.1| High mobility group protein B1 [Tupaia chinensis]
Length = 141
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDP+ PKRPPSAFF+F E+R K E P + + V K GE W + K P+E A
Sbjct: 28 KDPSAPKRPPSAFFLFCSEYRPEIKGERPG-RFIGDVAKRLGEMWNNTAADGKQPYEKNA 86
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + AY K
Sbjct: 87 AKLKGKYEKDIAAYRAK 103
>gi|270014157|gb|EFA10605.1| hypothetical protein TcasGA2_TC012866 [Tribolium castaneum]
Length = 840
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 47/74 (63%), Gaps = 3/74 (4%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KD NKPKRP +AF ++L E R K ++P +K ++ + K GGE WK L D K+ +E KA
Sbjct: 676 KDENKPKRPSTAFMLWLNEMRDKIKADNPGIK-ITEIAKKGGEMWKELKD--KSEWEGKA 732
Query: 111 AKRKLDYEKLMTAY 124
AK K +Y K M Y
Sbjct: 733 AKAKEEYNKAMKEY 746
>gi|119596659|gb|EAW76253.1| hCG2042470 [Homo sapiens]
Length = 118
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 47 KSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPF 106
K K DPN PKRP S FF+F EF K +P + ++ V K GE W +L D+EK P+
Sbjct: 8 KGGKNDPNAPKRPLSGFFLFCSEFCPKIKSTNPGI-SIGDVAKKLGEMWNNLNDSEKQPY 66
Query: 107 EAKAAKRKLDYEKLMTAYNKK 127
K AK K YEK + Y K
Sbjct: 67 VTKVAKLK-KYEKDVADYKSK 86
>gi|6680229|ref|NP_032278.1| high mobility group protein B2 [Mus musculus]
gi|1708259|sp|P30681.3|HMGB2_MOUSE RecName: Full=High mobility group protein B2; AltName: Full=High
mobility group protein 2; Short=HMG-2
gi|609169|emb|CAA86727.1| high mobility group 2 protein [Mus musculus]
gi|12834643|dbj|BAB22988.1| unnamed protein product [Mus musculus]
gi|12842629|dbj|BAB25672.1| unnamed protein product [Mus musculus]
gi|12849395|dbj|BAB28323.1| unnamed protein product [Mus musculus]
gi|52789313|gb|AAH83108.1| High mobility group box 2 [Mus musculus]
gi|55777186|gb|AAH46759.1| High mobility group box 2 [Mus musculus]
gi|74179666|dbj|BAE22481.1| unnamed protein product [Mus musculus]
gi|74179668|dbj|BAE22482.1| unnamed protein product [Mus musculus]
gi|74226660|dbj|BAE26982.1| unnamed protein product [Mus musculus]
Length = 210
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 54 NKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKR 113
N PKRPPSAFF+F E R K EHP + ++ K GE W + +K P+E KAAK
Sbjct: 93 NAPKRPPSAFFLFCSENRPKIKIEHPGL-SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 151
Query: 114 KLDYEKLMTAY 124
K YEK + AY
Sbjct: 152 KEKYEKDIAAY 162
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DPNKP+ S++ F++ R+ +K++HP+ + K E+WK+++ EK+ FE
Sbjct: 2 GKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K Y++ M Y
Sbjct: 62 DLAKSDKARYDREMKNY 78
>gi|11527222|gb|AAG36939.1|AF267733_1 high mobility group protein B2 [Mus musculus]
gi|12805183|gb|AAH02050.1| High mobility group box 2 [Mus musculus]
gi|74150328|dbj|BAE32214.1| unnamed protein product [Mus musculus]
gi|148672860|gb|EDL04807.1| mCG4647 [Mus musculus]
Length = 210
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 54 NKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKR 113
N PKRPPSAFF+F E R K EHP + ++ K GE W + +K P+E KAAK
Sbjct: 93 NAPKRPPSAFFLFCSENRPKIKIEHPGL-SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 151
Query: 114 KLDYEKLMTAY 124
K YEK + AY
Sbjct: 152 KEKYEKDIAAY 162
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DPNKP+ S++ F++ R+ +K++HP+ + K E+WK+++ EK+ FE
Sbjct: 2 GKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K Y++ M Y
Sbjct: 62 DLAKSDKARYDREMKNY 78
>gi|74185387|dbj|BAE30167.1| unnamed protein product [Mus musculus]
Length = 181
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 54 NKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKR 113
N PKRPPSAFF+F E R K EHP + ++ K GE W + +K P+E KAAK
Sbjct: 93 NAPKRPPSAFFLFCSENRPKIKIEHPGL-SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 151
Query: 114 KLDYEKLMTAYNKK 127
K YEK + AY K
Sbjct: 152 KEKYEKDIAAYRAK 165
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DPNKP+ S++ F++ R+ +K++HP+ + K E+WK+++ EK+ FE
Sbjct: 2 GKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K Y++ M Y
Sbjct: 62 DLAKSDKARYDREMKNY 78
>gi|47227840|emb|CAG09003.1| unnamed protein product [Tetraodon nigroviridis]
Length = 199
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F EFR K E+P + + K GE W S T +K P+E KA
Sbjct: 89 KDPNAPKRPPSAFFLFCAEFRPKVKSENPGL-TIGDTAKKLGEMWNSKTAEDKQPYEKKA 147
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K Y+K + AY K
Sbjct: 148 AKLKEKYDKDIVAYRTK 164
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFEAK 109
KDP KP+ S++ F++ R+ +K++HP+ + K E+WK+++ EK FE
Sbjct: 3 KDPKKPRGKMSSYAYFVQTCREEHKKKHPDASVNFAEFSKKCSERWKTMSPKEKGKFEDM 62
Query: 110 AAKRKLDYEKLMTAY 124
A + K+ YE+ M Y
Sbjct: 63 AKQDKVRYEREMKNY 77
>gi|348525338|ref|XP_003450179.1| PREDICTED: high mobility group-T protein-like isoform 1
[Oreochromis niloticus]
Length = 200
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F +FR K E+P + ++ K GE W S + EK P+E KA
Sbjct: 89 KDPNAPKRPPSAFFLFCADFRPKIKSEYPGL-SIGDTAKKLGEMWNSSSAEEKQPYEKKA 147
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K Y+K + AY K
Sbjct: 148 AKLKEKYDKDIVAYRTK 164
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFEAK 109
KDP KP+ S++ F++ R+ +K++HP+ S K E+WK+++ EK FE
Sbjct: 3 KDPKKPRGKMSSYAYFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSPKEKGKFEDM 62
Query: 110 AAKRKLDYEKLMTAY 124
A + KL YE+ M Y
Sbjct: 63 AKQDKLRYEREMKNY 77
>gi|392300930|gb|EIW12019.1| Nhp6bp [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 162
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
KKDPN PKR SA+ F E R + + E+P+V VG+ GE+WK+LT EK P+E+K
Sbjct: 84 KKDPNAPKRGLSAYMFFANENRDIVRSENPDV-TFGQVGRILGERWKALTAEEKQPYESK 142
Query: 110 AAKRKLDYEKLMTAYN 125
A K YE YN
Sbjct: 143 AQADKKRYESEKELYN 158
>gi|332808386|ref|XP_513298.3| PREDICTED: LOW QUALITY PROTEIN: high mobility group protein B4 [Pan
troglodytes]
Length = 186
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DP P+RPPS+F +F ++ K+E+PN V V KA G+ W ++TD EK P+E +AA
Sbjct: 89 DPQAPRRPPSSFLLFCQDHYAQLKRENPNWSVVQ-VAKATGKMWSTVTDLEKHPYEQRAA 147
Query: 112 KRKLDYEKLMTAYNKK 127
+ Y + + Y K+
Sbjct: 148 LLRAKYFEELELYRKQ 163
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 55 KPKRPPSAFFVFLEEFRKVYKQEHPNVK-AVSAVGKAGGEKWKSLTDAEKAPFEAKAAKR 113
KPK S++ FL +R +K++ PN + EKW+S++ EKA +EA A
Sbjct: 8 KPKANVSSYVHFLLNYRNKFKEQQPNTYVGFKEFSRKCSEKWRSISKHEKAKYEALAKLD 67
Query: 114 KLDYEKLMTAY 124
K Y++ M Y
Sbjct: 68 KARYQEEMMNY 78
>gi|344300446|gb|EGW30767.1| Non-histone chromosomal protein 6 [Spathaspora passalidarum NRRL
Y-27907]
Length = 93
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
KKDP+ PKR SA+ F E R + + E+P + + VGK GEKWK+LT EK P+E K
Sbjct: 14 KKDPDAPKRSLSAYMFFANENRDIVRAENPGI-SFGQVGKLLGEKWKALTADEKVPYENK 72
Query: 110 AAKRKLDYEKLMTAYNKKQ 128
A K YEK Y K+
Sbjct: 73 AETDKKRYEKEKAEYAKRN 91
>gi|326437020|gb|EGD82590.1| hypothetical protein PTSG_03243 [Salpingoeca sp. ATCC 50818]
Length = 210
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
KKDPN PK+P SA+FVF E R + ++P + VS K GE+W+ +T+ +K PF+ K
Sbjct: 132 KKDPNAPKKPKSAYFVFAETRRDALRAQYPEDR-VSDTAKRTGEEWRGMTEEQKRPFQLK 190
Query: 110 AAKRKLDYEKLMTAY 124
A + K +Y++ + Y
Sbjct: 191 AQELKQEYDQAVAEY 205
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPNKP+ + + F +E R Q+HPN +V+ V K G +W+ LTD +K P+ A
Sbjct: 45 DPNKPRGALTPYMCFNKEVRPAIMQQHPNA-SVTEVAKLIGAQWRQLTDEQKKPYNDMAR 103
Query: 112 KRKLDYEKLMTAY 124
+ Y++ M Y
Sbjct: 104 TDRERYKEAMKNY 116
>gi|391638|dbj|BAA03261.1| ORF1 [Gallus gallus]
Length = 298
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 2/85 (2%)
Query: 42 RTKNVKSAK-KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTD 100
R K V+S K KDPN PKRP SA+ ++L R+ K +HP + +++ + K GE WK+++
Sbjct: 119 RKKQVESKKGKDPNAPKRPMSAYMLWLNANREKIKSDHPGI-SITDLSKKAGELWKAMSK 177
Query: 101 AEKAPFEAKAAKRKLDYEKLMTAYN 125
+K ++ KA K DYEK M Y+
Sbjct: 178 EKKEEWDRKAEDAKRDYEKAMKEYS 202
>gi|74138677|dbj|BAE27155.1| unnamed protein product [Mus musculus]
Length = 215
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F E+R K +HP + ++ V K GE W + +K P+E KA
Sbjct: 90 KDPNAPKRPPSAFFLFCSEYRPKIKGKHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKA 148
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + AY K
Sbjct: 149 AKLKEKYEKDIAAYRAK 165
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DP KP+ S++ F++ R+ +K++HP+ S K E+WK+++ EK FE
Sbjct: 2 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K YE+ M Y
Sbjct: 62 DMAKADKARYEREMKTY 78
>gi|432895946|ref|XP_004076239.1| PREDICTED: high mobility group-T protein-like [Oryzias latipes]
Length = 206
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F EFR K E P + + V K GE W S + +K P+E KA
Sbjct: 89 KDPNAPKRPPSAFFIFCSEFRPKVKGESPGL-TIGDVAKRLGEMWNSTSAEDKQPYEKKA 147
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K Y K + AY K
Sbjct: 148 AKLKEKYGKDIAAYRAK 164
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFEAK 109
KDP KP+ S++ F++ R+ +K++HP+ + K E+WK+++ EK FE
Sbjct: 3 KDPTKPRGKMSSYAYFVQTCREEHKKKHPDASVNFAEFSKKCSERWKTMSAKEKGKFEDM 62
Query: 110 AAKRKLDYEKLMTAY 124
A + K+ Y++ M +Y
Sbjct: 63 ARQDKVRYDREMMSY 77
>gi|390463605|ref|XP_003733066.1| PREDICTED: high mobility group protein B1-like [Callithrix jacchus]
Length = 214
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F E+R K EHP + ++ V K GE W + +K P+E KA
Sbjct: 90 KDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKA 148
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YE + AY K
Sbjct: 149 AKLKEKYEMDIAAYRAK 165
Score = 43.5 bits (101), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DP KP+ S++ F++ R+ +K++HP+ S K E+WK+++ EK FE
Sbjct: 2 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K YE+ M Y
Sbjct: 62 DMAKADKARYEREMKTY 78
>gi|355563197|gb|EHH19759.1| hypothetical protein EGK_02478, partial [Macaca mulatta]
Length = 121
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKRP S FF+F EF K +P + ++ V K GE WK+L D+EK P+ K A
Sbjct: 26 DPNAPKRPLSGFFLFCSEFHPKMKSTNPGI-SIGDVAKKLGEMWKNLNDSEKQPYVTKVA 84
Query: 112 KRKLDYEKLMTAYNKK 127
K + YEK + Y K
Sbjct: 85 KL-MKYEKDVADYKSK 99
>gi|297297620|ref|XP_001106417.2| PREDICTED: high mobility group protein B2-like [Macaca mulatta]
Length = 210
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 54 NKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKR 113
N PKRPPSAFF+F E R K EHP + + K GE W + +K P+E KAAK
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGL-STGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 151
Query: 114 KLDYEKLMTAYNKK 127
K Y+K + AY K
Sbjct: 152 KEKYQKDIAAYRAK 165
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DPNKP+ S++ F++ R+ +K++HP + K E+WK+++ EK+ FE
Sbjct: 2 GKGDPNKPRGKMSSYAFFVQTCREEHKKKHPESSVNFAEFSKKCSERWKTMSAKEKSKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K+ Y++ M Y
Sbjct: 62 GMAKSDKVCYDREMKNY 78
>gi|397482786|ref|XP_003812597.1| PREDICTED: high mobility group protein B4 [Pan paniscus]
Length = 177
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DP P+RPPS+F +F ++ K+E+PN V V KA G+ W ++TD EK P+E +AA
Sbjct: 89 DPQAPRRPPSSFLLFCQDHYAQLKRENPNWSVVQ-VAKATGKMWSTVTDLEKHPYEQRAA 147
Query: 112 KRKLDYEKLMTAYNKK 127
+ Y + + Y K+
Sbjct: 148 LLRAKYFEELELYRKQ 163
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 55 KPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFEAKAAKR 113
KPK S++ FL +R +K++ PN + EKW+S++ EKA +EA A
Sbjct: 8 KPKANVSSYVHFLLNYRNKFKEQQPNTYVGFKEFSRKCSEKWRSISKHEKAKYEALAKLD 67
Query: 114 KLDYEKLMTAY 124
K Y++ M Y
Sbjct: 68 KARYQEEMMNY 78
>gi|296470699|tpg|DAA12814.1| TPA: high mobility group box 3-like [Bos taurus]
Length = 197
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 47/80 (58%), Gaps = 2/80 (2%)
Query: 45 NVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKA 104
+ K KKDPN PKRPPS FF+F EF K +P + ++ V K GE W +L+D++K
Sbjct: 79 SAKGGKKDPNAPKRPPSGFFLFFSEFCSEIKSTNPGI-SIGDVAKKLGEMWNNLSDSKKQ 137
Query: 105 PFEAKAAKRKLDYEKLMTAY 124
+ K AK K YEK + Y
Sbjct: 138 LYVNKDAKLK-KYEKDVADY 156
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
AK DP KPK SA F++ RK +K+ P V + K E+WK+++ EK+ F+
Sbjct: 2 AKGDPEKPKGKMSAHAFFVQMCRKKHKKT-PKVPVNFAEFSKKCSERWKTMSGKEKSTFD 60
Query: 108 AKAAKRKLDYEKLMTAY 124
A K+ Y + M Y
Sbjct: 61 EMAKADKVHYNQEMKDY 77
>gi|403293162|ref|XP_003937591.1| PREDICTED: high mobility group protein B4 [Saimiri boliviensis
boliviensis]
Length = 254
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DP P+RPPS+F +F ++ K+E+PN V V KA G+ W + TD EK P+E +AA
Sbjct: 152 DPQAPRRPPSSFLLFCQDHYAQLKRENPNWSVVQ-VAKATGKMWSATTDLEKQPYEQRAA 210
Query: 112 KRKLDYEKLMTAYNKK 127
+ Y + + Y K+
Sbjct: 211 LLRAKYFEELELYRKQ 226
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 55 KPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFEAKAAKR 113
KPK S++ FL +R +K++ PN + EKW+S++ EKA +EA A
Sbjct: 71 KPKANVSSYIHFLLNYRNKFKEQQPNTYVGFKEFSRKCSEKWRSISKHEKAKYEALAKLD 130
Query: 114 KLDYEKLMTAY 124
K Y++ M Y
Sbjct: 131 KARYQEEMMNY 141
>gi|444722008|gb|ELW62714.1| High mobility group protein B1 [Tupaia chinensis]
Length = 224
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF F E+R K EHP + ++ V K GE W + K P+E KA
Sbjct: 90 KDPNAPKRPPSAFFFFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWSNTAADAKQPYEKKA 148
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + AY K
Sbjct: 149 AKLKEKYEKDIAAYRAK 165
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFEA 108
K +P KP+ S++ F++ R+ +K++HP+ S K E+WK+++ EK FE
Sbjct: 3 KGNPTKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTVSAKEKGKFED 62
Query: 109 KAAKRKLDYEKLMTAY 124
A K YE+ M Y
Sbjct: 63 MAKADKARYEREMKTY 78
>gi|297302803|ref|XP_001082943.2| PREDICTED: high mobility group protein B1-like [Macaca mulatta]
Length = 169
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPS+FF+F E+R K EHP + V K GE W + +K P+E KA
Sbjct: 50 KDPNVPKRPPSSFFLFCSEYRPKTKGEHPGL-PFDDVAKNLGETWNNTAAGDKQPYEKKA 108
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YE+ AY K
Sbjct: 109 AKLKAKYERDTAAYRAK 125
>gi|283462216|gb|ADB22402.1| dorsal switch-like hmg protein [Saccoglossus kowalevskii]
Length = 241
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DP+ PKR S FF+F R K+ HPN V V KA GE+WK+++ A+KA +E +AA
Sbjct: 121 DPDAPKRNLSPFFLFCNVKRAEVKKVHPNW-GVGDVAKALGEQWKNVSAADKAKYEKEAA 179
Query: 112 KRKLDYEKLMTAY 124
K K+ YEK M AY
Sbjct: 180 KEKIRYEKDMEAY 192
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Query: 46 VKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSA-VGKAGGEKWKSLTDAEKA 104
+ K +P+KPK SA+ F++ R+ +K++HP V A K E+WK +TD EK
Sbjct: 26 IMGKKGNPDKPKGRMSAYAFFVQSCRQEHKKQHPAESVVFAEFSKKCAERWKKMTDKEKK 85
Query: 105 PFEAKAAKRKLDYEKLMTAYN 125
F A K K Y M Y
Sbjct: 86 VFHDMADKDKERYNTEMEKYT 106
>gi|82952271|ref|XP_889413.1| PREDICTED: high mobility group protein B1-like isoform 2 [Mus
musculus]
gi|407263905|ref|XP_003945567.1| PREDICTED: high mobility group protein B1-like isoform 1 [Mus
musculus]
Length = 215
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F +R K EHP + ++ V K GE W + +K P+E KA
Sbjct: 90 KDPNAPKRPPSAFFLFCSGYRPKIKGEHPGL-SIGDVAKKRGEMWNNTAADDKQPYEKKA 148
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + AY K
Sbjct: 149 AKLKEKYEKDIAAYRAK 165
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DP K + S++ F++ R+ +K++HP+ S K E+WK+++ EK FE
Sbjct: 2 GKGDPKKLRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K YE+ M Y
Sbjct: 62 DMAIADKARYEREMKTY 78
>gi|296317265|ref|NP_001171733.1| dorsal switch-like hmg protein [Saccoglossus kowalevskii]
Length = 215
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DP+ PKR S FF+F R K+ HPN V V KA GE+WK+++ A+KA +E +AA
Sbjct: 95 DPDAPKRNLSPFFLFCNVKRAEVKKVHPNW-GVGDVAKALGEQWKNVSAADKAKYEKEAA 153
Query: 112 KRKLDYEKLMTAY 124
K K+ YEK M AY
Sbjct: 154 KEKIRYEKDMEAY 166
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSA-VGKAGGEKWKSLTDAEKAPFEA 108
K +P+KPK SA+ F++ R+ +K++HP V A K E+WK +TD EK F
Sbjct: 4 KGNPDKPKGRMSAYAFFVQSCRQEHKKQHPAESVVFAEFSKKCAERWKKMTDKEKKVFHD 63
Query: 109 KAAKRKLDYEKLMTAYN 125
A K K Y M Y
Sbjct: 64 MADKDKERYNTEMEKYT 80
>gi|444726553|gb|ELW67082.1| High mobility group protein B1 [Tupaia chinensis]
Length = 111
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN +R PSAFF+F E+R K EHP + ++ V K GE W + +K P+ KA
Sbjct: 39 KDPNASQRSPSAFFLFSSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAAGDKQPYGKKA 97
Query: 111 AKRKLDYEKLMTAY 124
AK K YEK + AY
Sbjct: 98 AKLKEKYEKDIAAY 111
>gi|444728196|gb|ELW68660.1| High mobility group protein B1 [Tupaia chinensis]
Length = 221
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F E+R K EHP + + V K GE W + +K P+E KA
Sbjct: 105 KDPNAPKRPPSAFFLFCSEYRSKIKGEHPGL-SNGDVAKKLGEIWNNTAADDKQPYEKKA 163
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + AY K
Sbjct: 164 AKLKEKYEKDIAAYRAK 180
>gi|351704050|gb|EHB06969.1| High mobility group protein B2 [Heterocephalus glaber]
Length = 156
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 54 NKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKR 113
N PKRPPSAFF+F ++R K EHP + + K GE W + +K P+E K AK
Sbjct: 43 NAPKRPPSAFFLFCSKYRPKIKSEHPGL-STGDTAKKSGEMWSEQSAKDKQPYEQKGAKL 101
Query: 114 KLDYEKLMTAYNKK 127
YEK + AY+ K
Sbjct: 102 MEKYEKDIAAYHAK 115
>gi|149726074|ref|XP_001503141.1| PREDICTED: high mobility group protein B1-like [Equus caballus]
Length = 215
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F E+ K EHP + ++ V K GE W + +K P+E KA
Sbjct: 90 KDPNAPKRPPSAFFLFCSEYHPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKA 148
Query: 111 AKRKLDYEKLMTAY 124
AK K YEK + AY
Sbjct: 149 AKLKEKYEKDIAAY 162
Score = 42.4 bits (98), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DP KP+ S++ F++ R+ +K++HP+ S K E+WK+++ E+ FE
Sbjct: 2 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEEGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K YE+ M Y
Sbjct: 62 DMAKADKARYEREMKTY 78
>gi|29290594|emb|CAD83017.1| bM168F16.1 (novel protein similar to high-mobility group box 1
(Hmgb1)) [Mus musculus]
gi|148699130|gb|EDL31077.1| mCG49535 [Mus musculus]
Length = 208
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKR PSAFF+F E+ K EHP + ++ V K GE W + +K P E KA
Sbjct: 90 KDPNAPKRSPSAFFLFCSEYCHKIKGEHPGL-SIGVVAKKLGEMWINTAVYDKQPCEKKA 148
Query: 111 AKRKLDYEKLMTA 123
K K YEK + A
Sbjct: 149 TKLKEKYEKDIAA 161
>gi|350409390|ref|XP_003488719.1| PREDICTED: FACT complex subunit Ssrp1-like [Bombus impatiens]
Length = 736
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 48/75 (64%), Gaps = 3/75 (4%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
+KD NKPKRPP+AF ++L R+ K E+P + AV+ + K GGE W+ L D K+ +E K
Sbjct: 543 EKDANKPKRPPTAFMIWLNSARERIKAENPGI-AVTEIAKKGGEMWRELKD--KSEWEQK 599
Query: 110 AAKRKLDYEKLMTAY 124
AAK K +Y M Y
Sbjct: 600 AAKAKKEYTASMKEY 614
>gi|392883890|gb|AFM90777.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 54 NKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKR 113
N P+RPPSAFF+F + R + E+P + ++ V K GE W LT +K P+E + A+
Sbjct: 92 NAPRRPPSAFFIFCSDHRPRIRGENPGI-SIGDVAKKMGELWSGLTAKDKKPYEERGAQL 150
Query: 114 KLDYEKLMTAY 124
K YEK + AY
Sbjct: 151 KEKYEKEVAAY 161
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K+DP +P+ S++ F++ R+ +K++HP+ S K E+WK++T +K FE
Sbjct: 2 GKRDPRQPRGKMSSYAFFVQNSREEHKKKHPDSSVDFSEFSKQCSERWKAMTPKDKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAYN 125
A K+ Y++ M YN
Sbjct: 62 DLAKNDKVRYDREMRNYN 79
>gi|6325309|ref|NP_015377.1| Nhp6ap [Saccharomyces cerevisiae S288c]
gi|128182|sp|P11632.1|NHP6A_YEAST RecName: Full=Non-histone chromosomal protein 6A
gi|24987379|pdb|1J5N|A Chain A, Solution Structure Of The Non-Sequence-Specific Hmgb
Protein Nhp6a In Complex With Sry Dna
gi|24987655|pdb|1LWM|A Chain A, Solution Structure Of The Sequence-Non-Specific Hmgb
Protein Nhp6a
gi|4034|emb|CAA33377.1| unnamed protein product [Saccharomyces cerevisiae]
gi|171883|gb|AAA34754.1| high mobility group non-histone protein [Saccharomyces cerevisiae]
gi|805034|emb|CAA89171.1| Nhp6ap [Saccharomyces cerevisiae]
gi|1314122|emb|CAA94998.1| Nhp6ap [Saccharomyces cerevisiae]
gi|51013911|gb|AAT93249.1| YPR052C [Saccharomyces cerevisiae]
gi|285815583|tpg|DAA11475.1| TPA: Nhp6ap [Saccharomyces cerevisiae S288c]
gi|392296063|gb|EIW07166.1| Nhp6ap [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 93
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKR SA+ F E R + + E+P++ VGK GEKWK+LT EK P+EAKA
Sbjct: 17 DPNAPKRALSAYMFFANENRDIVRSENPDI-TFGQVGKKLGEKWKALTPEEKQPYEAKAQ 75
Query: 112 KRKLDYEKLMTAYN 125
K YE YN
Sbjct: 76 ADKKRYESEKELYN 89
>gi|413923415|gb|AFW63347.1| hypothetical protein ZEAMMB73_127996 [Zea mays]
Length = 95
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 40/54 (74%)
Query: 67 LEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKLDYEKL 120
+ EFR+ Y+ +HP K+V+AV KA GEKW+S+++ EK P+ +A ++K DYEK
Sbjct: 1 MSEFRQEYQAQHPGNKSVAAVSKAAGEKWRSMSEQEKQPYVDQAGQKKQDYEKT 54
>gi|6435676|pdb|1CG7|A Chain A, Hmg Protein Nhp6a From Saccharomyces Cerevisiae
Length = 93
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKR SA+ F E R + + E+P++ VGK GEKWK+LT EK P+EAKA
Sbjct: 17 DPNAPKRALSAYMFFANENRDIVRSENPDI-TFGQVGKKLGEKWKALTPEEKQPYEAKAQ 75
Query: 112 KRKLDYEKLMTAYN 125
K YE YN
Sbjct: 76 ADKKRYESEKELYN 89
>gi|151942838|gb|EDN61184.1| nonhistone chromosomal protein [Saccharomyces cerevisiae YJM789]
gi|190407991|gb|EDV11256.1| 11 kDa nonhistone chromosomal protein [Saccharomyces cerevisiae
RM11-1a]
gi|256268928|gb|EEU04275.1| Nhp6ap [Saccharomyces cerevisiae JAY291]
gi|259150205|emb|CAY87008.1| Nhp6ap [Saccharomyces cerevisiae EC1118]
gi|349581863|dbj|GAA27020.1| K7_Nhp6ap [Saccharomyces cerevisiae Kyokai no. 7]
Length = 93
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKR SA+ F E R + + E+P++ VGK GEKWK+LT EK P+EAKA
Sbjct: 17 DPNAPKRALSAYMFFANENRDIVRSENPDI-TFGQVGKKLGEKWKALTPEEKQPYEAKAQ 75
Query: 112 KRKLDYEKLMTAYN 125
K YE YN
Sbjct: 76 ADKKRYESEKELYN 89
>gi|365982187|ref|XP_003667927.1| hypothetical protein NDAI_0A05290 [Naumovozyma dairenensis CBS 421]
gi|343766693|emb|CCD22684.1| hypothetical protein NDAI_0A05290 [Naumovozyma dairenensis CBS 421]
Length = 93
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
KKDPN PKR SA+ F + R + K E+PN+ +GK G KWK L D EK P++ K
Sbjct: 15 KKDPNAPKRGLSAYMFFANDNRDIVKAENPNI-TFGQIGKVLGAKWKELNDEEKQPYQDK 73
Query: 110 AAKRKLDYEKLMTAYN 125
A K YE YN
Sbjct: 74 ADADKKRYESEKELYN 89
>gi|126274287|ref|XP_001387507.1| Nonhistone chromosomal protein 6A [Scheffersomyces stipitis CBS
6054]
gi|126213377|gb|EAZ63484.1| Nonhistone chromosomal protein 6A, partial [Scheffersomyces
stipitis CBS 6054]
Length = 85
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
KKDP+ PKR SA+ F E R + + E+P + + VGK GEKWK+LT EK P+E K
Sbjct: 12 KKDPDAPKRSLSAYMFFANENRDIVRAENPGI-SFGQVGKLLGEKWKALTGEEKGPYENK 70
Query: 110 AAKRKLDYEKLMTAY 124
A K YEK Y
Sbjct: 71 AEADKKRYEKEKAEY 85
>gi|40352857|gb|AAH64790.1| Hmgb1 protein [Mus musculus]
Length = 215
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPP AFF+F E+R K EHP + ++ V K GE W + +K P+E KA
Sbjct: 90 KDPNAPKRPPLAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKA 148
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + AY K
Sbjct: 149 AKLKEKYEKDIAAYRAK 165
Score = 43.5 bits (101), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DP KP+ S++ F++ R+ +K++HP+ S K E+WK+++ EK FE
Sbjct: 2 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K YE+ M Y
Sbjct: 62 DMAKADKARYEREMKTY 78
>gi|444518140|gb|ELV11977.1| High mobility group protein B3 [Tupaia chinensis]
Length = 198
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 44/69 (63%), Gaps = 2/69 (2%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKR PS FF+F EFR K +P + ++ V K G+ W +L+D+EK P+ KA
Sbjct: 90 KDPNAPKRRPSVFFLFCSEFRLKIKSTNPGI-SIGDVAKKLGDVWNNLSDSEKQPYITKA 148
Query: 111 AKRKLDYEK 119
AK K YEK
Sbjct: 149 AKLK-KYEK 156
>gi|340713595|ref|XP_003395326.1| PREDICTED: FACT complex subunit Ssrp1-like [Bombus terrestris]
Length = 735
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 48/75 (64%), Gaps = 3/75 (4%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
+KD NKPKRPP+AF ++L R+ K E+P + AV+ + K GGE W+ L D K+ +E K
Sbjct: 543 EKDANKPKRPPTAFMIWLNSARERIKAENPGI-AVTEIAKKGGEMWRELKD--KSEWEQK 599
Query: 110 AAKRKLDYEKLMTAY 124
AAK K +Y M Y
Sbjct: 600 AAKAKKEYTASMKEY 614
>gi|354468511|ref|XP_003496696.1| PREDICTED: high mobility group protein B1-like [Cricetulus griseus]
gi|344237248|gb|EGV93351.1| High mobility group protein B1 [Cricetulus griseus]
Length = 220
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F E+R K EHP + ++ V K GE W + +K PFE KA
Sbjct: 90 KDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPFEKKA 148
Query: 111 AKRKLDYEKLMTAYNKKQY 129
AK K YEK + + Y
Sbjct: 149 AKLKEKYEKDIAGEDIAAY 167
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DP KP+ S++ F++ R+ +K++HP+ S K E+WK+++ EK FE
Sbjct: 2 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K YE+ M Y
Sbjct: 62 DMAKADKARYEREMKTY 78
>gi|451996730|gb|EMD89196.1| hypothetical protein COCHEDRAFT_1107529 [Cochliobolus
heterostrophus C5]
Length = 105
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKR SA+ F E R+ ++++P +K VGK GEKWK+L D ++ P+EAKAA
Sbjct: 23 DPNAPKRGLSAYMFFANEQREKVREDNPGIK-FGEVGKLLGEKWKALNDKQRQPYEAKAA 81
Query: 112 KRKLDYEKLMTAYN 125
K YE+ AY
Sbjct: 82 LDKKRYEQEKAAYT 95
>gi|328350132|emb|CCA36532.1| Hepatocyte growth factor-regulated tyrosine kinase substrate
[Komagataella pastoris CBS 7435]
Length = 725
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
KKDPN PKR SA+ F E R + + E+P ++ +GK GEKWK+L KAP+E+K
Sbjct: 643 KKDPNAPKRSLSAYMFFANEQRDIVRSENPGIQ-FGEIGKLLGEKWKALDAEGKAPYESK 701
Query: 110 AAKRKLDYEKLMTAYNKKQY 129
A + K YE Y KKQ+
Sbjct: 702 AEEDKKRYELEKAEYFKKQH 721
>gi|401839076|gb|EJT42436.1| NHP6A-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 93
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKR SA+ F E R + + E+P++ VGK GEKWK+LT EK P+EAKA
Sbjct: 17 DPNAPKRALSAYMFFANENRDIVRSENPDI-TFGQVGKKLGEKWKALTPEEKQPYEAKAQ 75
Query: 112 KRKLDYEKLMTAYN 125
K YE YN
Sbjct: 76 ADKKRYESEKELYN 89
>gi|444526057|gb|ELV14266.1| High mobility group protein B1 [Tupaia chinensis]
Length = 166
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F E+ K EHP + + V K GE W + EK P+E KA
Sbjct: 78 KDPNTPKRPPSAFFLFCSEYSPKIKGEHPGL-PIGDVTKKLGEMWNNTGADEKQPYEKKA 136
Query: 111 AKRKLDYEKLMTAY 124
AK K YEK + AY
Sbjct: 137 AKLKEKYEKDIAAY 150
>gi|443724197|gb|ELU12309.1| hypothetical protein CAPTEDRAFT_56147, partial [Capitella teleta]
Length = 196
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 56/104 (53%), Gaps = 6/104 (5%)
Query: 22 EDRAAGKRKAVLKASRSSNKRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNV 81
EDR KAV+ +R + + +D N+PKRP SA+F++L FR K + P
Sbjct: 68 EDRKGFDAKAVVDKARYEEQMNR---YKGRDKNRPKRPQSAYFLWLAGFRTRMKDKIPVN 124
Query: 82 KAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKLDYEKLMTAYN 125
K + +A GE WK LT+ EKAP+E A + YE+ M YN
Sbjct: 125 KELL---RAAGEHWKRLTEVEKAPYEQMAEGERRKYEEAMRQYN 165
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
Query: 35 ASRSSNKRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEK 94
A+ KR KN KDPN+PKRP SA+F ++ R ++ + V+ K +
Sbjct: 7 ATTKGGKRKKN-----KDPNRPKRPTSAYFFYVAHCRAECEKRGERITRVAQWTKEISQV 61
Query: 95 WKSLTDAEKAPFEAKAAKRKLDYEKLMTAY 124
W+ +T ++ F+AKA K YE+ M Y
Sbjct: 62 WREMTPEDRKGFDAKAVVDKARYEEQMNRY 91
>gi|410966739|ref|XP_003989887.1| PREDICTED: high mobility group protein B4 [Felis catus]
Length = 193
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DP P+RPPS+F +F ++ K+E+PN V V KA G+ W + T AEK P+E +AA
Sbjct: 91 DPYAPRRPPSSFLLFCQDHYAQLKRENPNWSVVQ-VAKASGKMWSATTGAEKQPYEQRAA 149
Query: 112 KRKLDYEKLMTAYNKK 127
+ Y++ + Y K+
Sbjct: 150 LLRAKYQEDLEIYRKQ 165
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 55 KPKRPPSAFFVFLEEFRKVYKQEHPNVK-AVSAVGKAGGEKWKSLTDAEKAPFEAKAAKR 113
+PK S++ FL +R +K++ PN + + EKW+S++ EKA +EA A
Sbjct: 10 RPKANVSSYIHFLLNYRNKFKEQQPNTYLSFKEFSRKCSEKWRSISKHEKAKYEALAKLD 69
Query: 114 KLDYEKLMTAY 124
K Y++ M Y
Sbjct: 70 KARYQEEMMNY 80
>gi|410081503|ref|XP_003958331.1| hypothetical protein KAFR_0G01620 [Kazachstania africana CBS 2517]
gi|372464919|emb|CCF59196.1| hypothetical protein KAFR_0G01620 [Kazachstania africana CBS 2517]
Length = 95
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 44 KNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEK 103
K + KKDPN PKR SA+ F E R + + E+P+V +G+ GE+WK+L +K
Sbjct: 9 KRTQRRKKDPNAPKRALSAYMFFANENRDIVRSENPDV-TFGQIGRILGERWKALNAEDK 67
Query: 104 APFEAKAAKRKLDYE 118
P+EAKAA K YE
Sbjct: 68 EPYEAKAAADKKRYE 82
>gi|413938186|gb|AFW72737.1| hypothetical protein ZEAMMB73_544458 [Zea mays]
Length = 96
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 43/62 (69%)
Query: 67 LEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKLDYEKLMTAYNK 126
+ EFR+ Y+ HP K+V+ V KA GEKW++++D EK P+ +A ++K DYEK ++K
Sbjct: 1 MSEFRQEYQALHPGNKSVATVSKAAGEKWRAMSDQEKQPYVDQAGQKKQDYEKTKANFDK 60
Query: 127 KQ 128
K+
Sbjct: 61 KE 62
>gi|444721179|gb|ELW61931.1| High mobility group protein B1 [Tupaia chinensis]
Length = 212
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F E+R K EHP + ++ + K GE W + K P+E KA
Sbjct: 90 KDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SMGDIAKKLGELWNNTAADGKQPYEKKA 148
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + AY K
Sbjct: 149 AKLKEKYEKNIAAYRAK 165
>gi|395542387|ref|XP_003773114.1| PREDICTED: high mobility group protein B2 isoform 1 [Sarcophilus
harrisii]
gi|395542389|ref|XP_003773115.1| PREDICTED: high mobility group protein B2 isoform 2 [Sarcophilus
harrisii]
Length = 207
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 54 NKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKR 113
N PKRPPSAFF+F E R K EHP + ++ K GE W + +K P+E K AK
Sbjct: 93 NAPKRPPSAFFLFCAEHRPKIKSEHPGL-SIGDTAKKLGELWSEQSAKDKLPYEQKVAKL 151
Query: 114 KLDYEKLMTAY 124
K YEK + AY
Sbjct: 152 KEKYEKDIAAY 162
Score = 42.7 bits (99), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DPNKP+ S++ F++ R+ +K++HP+ + K E+WK+++ EK+ FE
Sbjct: 2 GKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSPVNFAEFSKKCSERWKTMSAKEKSKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K Y++ M Y
Sbjct: 62 DLAKGDKARYDREMKNY 78
>gi|126331239|ref|XP_001365344.1| PREDICTED: high mobility group protein B2-like [Monodelphis
domestica]
Length = 207
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 54 NKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKR 113
N PKRPPSAFF+F E R K EHP + ++ K GE W + +K P+E K AK
Sbjct: 93 NAPKRPPSAFFLFCAEHRPKIKSEHPGL-SIGDTAKKLGELWSEQSAKDKLPYEQKVAKL 151
Query: 114 KLDYEKLMTAY 124
K YEK + AY
Sbjct: 152 KEKYEKDIAAY 162
Score = 42.7 bits (99), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DPNKP+ S++ F++ R+ +K++HP+ + K E+WK+++ EK+ FE
Sbjct: 2 GKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSPVNFAEFSKKCSERWKTMSAKEKSKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K Y++ M Y
Sbjct: 62 DLAKGDKARYDREMKNY 78
>gi|401623234|gb|EJS41340.1| nhp6ap [Saccharomyces arboricola H-6]
Length = 93
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKR SA+ F E R + + E+P++ VGK GEKWK+LT EK P+EAKA
Sbjct: 17 DPNAPKRALSAYMFFANENRDIVRSENPDI-TFGQVGKKLGEKWKALTPEEKLPYEAKAQ 75
Query: 112 KRKLDYEKLMTAYN 125
K YE YN
Sbjct: 76 ADKKRYESEKELYN 89
>gi|148707462|gb|EDL39409.1| mCG8212 [Mus musculus]
Length = 145
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
KKDPN PKRPPS FF+F EF K +P + ++ V K GE WK+L+D+E A + K
Sbjct: 35 KKDPNAPKRPPSGFFLFCSEFHPKIKFTNPGI-SIGDVAKKLGEMWKNLSDSE-AAYVTK 92
Query: 110 AAKRKLDYEKLMTAYNKK 127
AAK K EK ++ + K
Sbjct: 93 AAKLKEKDEKGVSDWQSK 110
>gi|344228278|gb|EGV60164.1| hypothetical protein CANTEDRAFT_110112 [Candida tenuis ATCC 10573]
Length = 89
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
KKDP+ PKR SA+ F + R + + E+P + A VG+ GE+WK+LT EK P+E K
Sbjct: 11 KKDPDAPKRSLSAYMFFANDNRDIVRAENPGI-AFGQVGRLLGERWKALTADEKIPYEKK 69
Query: 110 AAKRKLDYEKLMTAYNKK 127
A K YEK Y KK
Sbjct: 70 ANDDKKRYEKQKAEYAKK 87
>gi|410910282|ref|XP_003968619.1| PREDICTED: high mobility group-T protein-like isoform 1 [Takifugu
rubripes]
Length = 196
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F E R K E+P + + K GE W S T EK P+E KA
Sbjct: 89 KDPNAPKRPPSAFFLFCAELRPKVKSENPGL-TIGDTAKKLGEMWNSKTAEEKQPYEKKA 147
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K Y+K + AY K
Sbjct: 148 AKLKEKYDKDIVAYRTK 164
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFEAK 109
KDP KP+ S++ F++ R+ +K++HP+ + K E+WK+++ EK FE
Sbjct: 3 KDPKKPRGKMSSYAYFVQTCREEHKKKHPDASVNFAEFSKKCSERWKTMSPKEKGKFEDM 62
Query: 110 AAKRKLDYEKLMTAY 124
A + K+ YE+ M Y
Sbjct: 63 AKQDKVRYEREMKNY 77
>gi|23394916|gb|AAN31640.1|AF484963_1 high mobility group protein 1 [Biomphalaria glabrata]
Length = 215
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 46/75 (61%), Gaps = 3/75 (4%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPNKPKRPP+A+F+FL ++R + K + K GE+W+SL++ +K P+E KA
Sbjct: 96 DPNKPKRPPTAYFLFLADYRIRMANKGIEHKELL---KMAGEEWRSLSNEDKKPYEKKAL 152
Query: 112 KRKLDYEKLMTAYNK 126
+ YE MT Y K
Sbjct: 153 EESKKYESAMTEYRK 167
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 43/81 (53%)
Query: 44 KNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEK 103
KN K KD NKPKR SA+F FL + RK + ++ K EKWK+L+ +K
Sbjct: 10 KNSKKKVKDVNKPKRATSAYFFFLAQCRKEAAKAGKAPTKIAEFTKEASEKWKALSADKK 69
Query: 104 APFEAKAAKRKLDYEKLMTAY 124
PFEA AA K YE M Y
Sbjct: 70 KPFEAAAADDKRRYETEMAVY 90
>gi|380011419|ref|XP_003689803.1| PREDICTED: LOW QUALITY PROTEIN: FACT complex subunit Ssrp1-like
[Apis florea]
Length = 729
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 46/73 (63%), Gaps = 3/73 (4%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
D NKPKRPP+AF ++L R+ K E+P + AV+ + K GGE W+ L D K+ +E KAA
Sbjct: 545 DANKPKRPPTAFMMWLNSARERIKAENPGI-AVTEIAKKGGEMWRELKD--KSEWEQKAA 601
Query: 112 KRKLDYEKLMTAY 124
K K DY M Y
Sbjct: 602 KAKKDYSASMKEY 614
>gi|448079731|ref|XP_004194450.1| Piso0_004944 [Millerozyma farinosa CBS 7064]
gi|359375872|emb|CCE86454.1| Piso0_004944 [Millerozyma farinosa CBS 7064]
Length = 92
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
KKDP+ PKR SA+ F E R + + E+P + + VGK GEKWK+++ +K P+E K
Sbjct: 13 KKDPDAPKRSLSAYMFFANENRDIVRAENPGI-SFGQVGKLLGEKWKAMSSEDKTPYETK 71
Query: 110 AAKRKLDYEKLMTAYNKK 127
A K YEK Y KK
Sbjct: 72 AEADKKRYEKEKAEYAKK 89
>gi|410044942|ref|XP_001169551.3| PREDICTED: high mobility group protein B1-like [Pan troglodytes]
Length = 269
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 57/112 (50%), Gaps = 9/112 (8%)
Query: 24 RAAGKRKAVLKASRSSNKRTK--------NVKSAKKDPNKPKRPPSAFFVFLEEFRKVYK 75
RA GK + + K +S KR K KDPN PKRPPSAFF++ E+ K
Sbjct: 82 RARGKFEDMAKVDKSRYKREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLYFSEYGPKIK 141
Query: 76 QEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKLDYEKLMTAYNKK 127
E P + ++ K GE W + +K P+E ++AK K YEK + AY K
Sbjct: 142 GERPGL-SIGDAAKKLGEMWNNTAADDKQPYEKRSAKLKEKYEKDIAAYRAK 192
>gi|119588737|gb|EAW68331.1| hCG1991922, isoform CRA_a [Homo sapiens]
gi|119588738|gb|EAW68332.1| hCG1991922, isoform CRA_a [Homo sapiens]
Length = 188
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF++ E+ K E P + + V K GE W + +K P+E ++
Sbjct: 39 KDPNAPKRPPSAFFLYFSEYGPKIKGERPGL-SFGDVAKKLGEMWNNTAADDKQPYEKRS 97
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + AY K
Sbjct: 98 AKLKEKYEKDIAAYRAK 114
>gi|254580675|ref|XP_002496323.1| ZYRO0C15752p [Zygosaccharomyces rouxii]
gi|238939214|emb|CAR27390.1| ZYRO0C15752p [Zygosaccharomyces rouxii]
Length = 98
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKR SA+ F E R + + E+P+V VG+ GEKWK+LT EK P+EAKA
Sbjct: 17 DPNAPKRALSAYMFFANENRDIVRAENPDV-TFGQVGRILGEKWKALTPDEKTPYEAKAE 75
Query: 112 KRKLDYEKLMTAYN 125
K YE YN
Sbjct: 76 ADKKRYESEKELYN 89
>gi|444728198|gb|ELW68662.1| High mobility group protein B1 [Tupaia chinensis]
Length = 132
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F E+R K EHP + + V K GE W + +K P+E KA
Sbjct: 16 KDPNAPKRPPSAFFLFCSEYRSKIKGEHPGL-SNGDVAKKLGEIWNNTAADDKQPYEKKA 74
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + AY K
Sbjct: 75 AKLKEKYEKDIAAYRAK 91
>gi|432889764|ref|XP_004075350.1| PREDICTED: high mobility group-T protein-like [Oryzias latipes]
Length = 194
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F +FR K E P + ++ K GE W S + EK P+E KA
Sbjct: 89 KDPNAPKRPPSAFFLFCADFRPKIKSESPGL-SIGDTAKKLGEMWNSSSAEEKQPYEKKA 147
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K Y+K + AY K
Sbjct: 148 AKLKEKYDKDIVAYRTK 164
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFEAK 109
KDP KP+ S++ F++ R+ +K++HP+ S K E+WK+++ EK FE
Sbjct: 3 KDPKKPRGKMSSYAYFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSPKEKGKFEDM 62
Query: 110 AAKRKLDYEKLMTAY 124
A + K+ YE+ M Y
Sbjct: 63 AKQDKVRYEREMKNY 77
>gi|62087576|dbj|BAD92235.1| high-mobility group box 1 variant [Homo sapiens]
Length = 176
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F E+R K EHP + ++ V K GE W + +K P+E KA
Sbjct: 92 KDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKA 150
Query: 111 AKRKLDYEKL 120
AK K YEK+
Sbjct: 151 AKLKEKYEKV 160
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 46 VKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKA 104
+ K DP KP+ S++ F++ R+ +K++HP+ S K E+WK+++ EK
Sbjct: 1 LNMGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKG 60
Query: 105 PFEAKAAKRKLDYEKLMTAY 124
FE A K YE+ M Y
Sbjct: 61 KFEDMAKADKARYEREMKTY 80
>gi|355766483|gb|EHH62519.1| hypothetical protein EGM_20887 [Macaca fascicularis]
Length = 198
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
D N PKRPPS FF+F +F K +P + ++ + K GE WK+L D+EK P+ KAA
Sbjct: 76 DSNAPKRPPSGFFLFSSKFCPKMKSTNPGI-SIGDMVKKLGEMWKNLNDSEKQPYITKAA 134
Query: 112 KRKLDYEK 119
K K YEK
Sbjct: 135 KLKDKYEK 142
>gi|296227498|ref|XP_002759405.1| PREDICTED: high mobility group protein B1-like [Callithrix jacchus]
Length = 215
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKRPPSAFF+F E+R K EHP + ++ V K G+ W + +K P+E KAA
Sbjct: 91 DPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGKMWSNTAADDKQPYEKKAA 149
Query: 112 KRKLDYEKLMTAYNKK 127
K K YEK + AY K
Sbjct: 150 KLKEKYEKDIAAYRAK 165
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DP KP+ S++ F++ R+ +K++HP+ S K E+WK+++ EK FE
Sbjct: 2 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K YE+ M Y
Sbjct: 62 DMAKADKARYEREMKTY 78
>gi|448530095|ref|XP_003869985.1| Nhp6a non-histone chromatin component [Candida orthopsilosis Co
90-125]
gi|354547725|emb|CCE44460.1| hypothetical protein CPAR2_402610 [Candida parapsilosis]
gi|380354339|emb|CCG23854.1| Nhp6a non-histone chromatin component [Candida orthopsilosis]
Length = 93
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 46 VKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAP 105
V KKDP+ PKR SA+ F E R + + E+P + + VGKA G+KWK+L+ +K P
Sbjct: 10 VSRKKKDPDAPKRSLSAYMFFANENRDIVRAENPGI-SFGQVGKALGDKWKALSAEDKVP 68
Query: 106 FEAKAAKRKLDYEKLMTAYNKKQ 128
+E KA K YEK Y KK
Sbjct: 69 YENKAEADKKRYEKEKAEYAKKN 91
>gi|401412468|ref|XP_003885681.1| High mobility group protein 1, related [Neospora caninum Liverpool]
gi|325120101|emb|CBZ55655.1| High mobility group protein 1, related [Neospora caninum Liverpool]
Length = 98
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 53/82 (64%), Gaps = 1/82 (1%)
Query: 47 KSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAP 105
K KKDPN PK+P S++ F ++ R ++ P++K+ + VGK GE+W L+ ++K
Sbjct: 16 KRVKKDPNAPKKPLSSYMFFAKDKRAEILKKQPSLKSDIGKVGKMIGEEWAKLSSSQKLT 75
Query: 106 FEAKAAKRKLDYEKLMTAYNKK 127
++ KA + K+ Y++ M+ YNKK
Sbjct: 76 YQKKAEQEKIRYQREMSLYNKK 97
>gi|170097113|ref|XP_001879776.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164645179|gb|EDR09427.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 114
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 57/98 (58%), Gaps = 7/98 (7%)
Query: 28 KRKAVLKASRSSNKRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAV 87
KRKA KA ++++++ KKDPNKPKR SA+ F +++R K E+P+ V
Sbjct: 9 KRKAAEKADKATSRK------GKKDPNKPKRALSAYMFFSQDWRDRIKAENPDA-GFGEV 61
Query: 88 GKAGGEKWKSLTDAEKAPFEAKAAKRKLDYEKLMTAYN 125
GK G KWK L + EK P+ +A+K K E+ AY+
Sbjct: 62 GKLLGAKWKELDEEEKKPYVEQASKDKTRAEEAKAAYD 99
>gi|221045048|dbj|BAH14201.1| unnamed protein product [Homo sapiens]
Length = 174
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F E+R K EHP + ++ V K GE W + +K P+E KA
Sbjct: 90 KDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKA 148
Query: 111 AKRKLDYEKL 120
AK K YEK+
Sbjct: 149 AKLKEKYEKV 158
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DP KP+ S++ F++ R+ +K++HP+ S K E+WK+++ EK FE
Sbjct: 2 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K YE+ M Y
Sbjct: 62 DMAKADKARYEREMKTY 78
>gi|392352276|ref|XP_003751165.1| PREDICTED: high mobility group protein B1 [Rattus norvegicus]
Length = 187
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F E+R K EHP + ++ V K GE W + +K P+E KA
Sbjct: 90 KDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKA 148
Query: 111 AKRKLDYEKL 120
AK K YEK+
Sbjct: 149 AKLKEKYEKV 158
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DP KP+ S++ F++ R+ +K++HP+ S K E+WK+++ EK FE
Sbjct: 2 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K YE+ M Y
Sbjct: 62 DMAKADKARYEREMKTY 78
>gi|291410693|ref|XP_002721624.1| PREDICTED: high-mobility group box 1 [Oryctolagus cuniculus]
Length = 215
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKR PSAFF+F E+R K EHP + ++ V K GE W + +K P+E KA
Sbjct: 90 KDPNAPKRTPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKA 148
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + AY K
Sbjct: 149 AKLKEKYEKDIAAYRAK 165
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DP KP+ S++ F++ R+ +K++HP+ S K E+WK+++ EK FE
Sbjct: 2 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K YE+ M Y
Sbjct: 62 DMAKADKARYEREMKTY 78
>gi|392340368|ref|XP_003754052.1| PREDICTED: high mobility group protein B1-like [Rattus norvegicus]
gi|392347889|ref|XP_003749961.1| PREDICTED: high mobility group protein B1-like [Rattus norvegicus]
Length = 215
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F E+ K EHP + ++ V K GE W + +K P E KA
Sbjct: 90 KDPNAPKRPPSAFFLFCSEYHPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPCEKKA 148
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + AY K
Sbjct: 149 AKLKEKYEKDIAAYRAK 165
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DP K + S++ F++ R+ +K++HP+ S K E+WK+++ EK FE
Sbjct: 2 GKGDPKKLRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K YE+ M Y
Sbjct: 62 DMAKADKARYEREMKTY 78
>gi|225706046|gb|ACO08869.1| High mobility group-T protein [Osmerus mordax]
Length = 204
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F +FR K E P + + V K GE W +K P+E KA
Sbjct: 89 KDPNAPKRPPSAFFIFCADFRAKVKGETPGL-TIGDVAKKLGEMWNGTCAEDKQPYEKKA 147
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + AY K
Sbjct: 148 AKLKEKYEKDIAAYRAK 164
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFEAK 109
KDP KP+ S++ F++ R+ +K++HP S K E+WK+++ EK FE
Sbjct: 3 KDPTKPRGKMSSYAYFVQTCREEHKKKHPEASVNFSEFSKKCSERWKTMSAKEKGKFEDL 62
Query: 110 AAKRKLDYEKLMTAY 124
A K+ YE+ M Y
Sbjct: 63 AKLDKVRYEREMKNY 77
>gi|395847762|ref|XP_003796535.1| PREDICTED: high mobility group protein B3-like [Otolemur garnettii]
Length = 255
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
KKDPN P RPPS F +F EF K +P + ++ V K E W +L+ +EK P+ K
Sbjct: 110 KKDPNAPTRPPSGFCLFCSEFHPKIKSTNPGI-SIGDVAKKLSEMWSNLSGSEKQPYITK 168
Query: 110 AAKRKLDYEKLMTAYNKK 127
AA+ + YEK + Y K
Sbjct: 169 AAQLREKYEKDVADYKSK 186
>gi|258563818|ref|XP_002582654.1| nonhistone chromosomal protein 6A [Uncinocarpus reesii 1704]
gi|237908161|gb|EEP82562.1| nonhistone chromosomal protein 6A [Uncinocarpus reesii 1704]
Length = 115
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
Query: 53 PNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAK 112
PN PKR SA+ F E R+ ++E+P + + VGK GE+WK+L+D ++AP+E KAA
Sbjct: 22 PNAPKRGLSAYMFFANEQRENVREENPGI-SFGQVGKLLGERWKALSDKQRAPYEEKAAA 80
Query: 113 RKLDYEKLMTAYNK 126
K YE +YN+
Sbjct: 81 DKKRYEDEKASYNQ 94
>gi|395857899|ref|XP_003801318.1| PREDICTED: high mobility group protein B4 [Otolemur garnettii]
Length = 187
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DP P+RPPS+F +F ++ K+E+PN V V KA G+ W T+AEK P+E +AA
Sbjct: 89 DPQAPRRPPSSFLLFCKDHYAQLKRENPNWSVVQ-VAKASGKMWSLSTNAEKQPYEERAA 147
Query: 112 KRKLDYEKLMTAYNKK 127
+ Y++ + Y ++
Sbjct: 148 LLRAKYQEELQIYRRQ 163
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 55 KPKRPPSAFFVFLEEFRKVYKQEHPNVK-AVSAVGKAGGEKWKSLTDAEKAPFEAKAAKR 113
+PK S++ FL +R +K++ PN + EKW+S++ EKA +EA A
Sbjct: 8 RPKVNVSSYIHFLLNYRNKFKEQQPNTYVGFKDFSRKCSEKWRSISKHEKAKYEALAKLD 67
Query: 114 KLDYEKLMTAYN 125
K Y++ M Y+
Sbjct: 68 KARYQEEMMHYD 79
>gi|3551257|dbj|BAA32827.1| 98b [Daucus carota]
Length = 502
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 53 PNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAK 112
P KPK P SAFF+F+ E R E NV VGK GE+WK++T+ EKAP+E A K
Sbjct: 287 PLKPKHPVSAFFLFMNERRADLVAEKKNV---LEVGKITGEEWKNMTEKEKAPYEEMAKK 343
Query: 113 RKLDYEKLMTAYNKK 127
K Y + M Y KK
Sbjct: 344 NKNQYLQQMEVYKKK 358
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Query: 37 RSSNKRTKNVKSAKK--DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEK 94
++ +R K K KK DPNKPKRP S+F +F +E RK +E P + S + K
Sbjct: 397 KTKEERQKKQKGEKKIVDPNKPKRPASSFLLFSKEARKTISEERPGINN-STLNALISVK 455
Query: 95 WKSLTDAEKAPFEAKAAKRKLDYEKLMTAYNK 126
WK ++ EK + KAA Y+K M YNK
Sbjct: 456 WKEISHEEKQLWNEKAAGAMEAYKKEMEEYNK 487
>gi|440912073|gb|ELR61675.1| Putative high mobility group protein B3-like protein, partial [Bos
grunniens mutus]
Length = 190
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 51/89 (57%), Gaps = 6/89 (6%)
Query: 40 NKRTKNVKSAK----KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKW 95
N+ K+ SAK KDPN PKRPPS FF+F EF K +P + ++ V K GE W
Sbjct: 71 NQEMKDYGSAKGGKKKDPNAPKRPPSGFFLFFSEFCSKIKSTNPGI-SIGDVAKKLGEMW 129
Query: 96 KSLTDAEKAPFEAKAAKRKLDYEKLMTAY 124
+L+D++K + K AK K YEK + Y
Sbjct: 130 NNLSDSKKQLYINKDAKLK-KYEKDVADY 157
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
AK DP KPK SA F++ RK +K+ P V + K E+WK+++ EK+ F+
Sbjct: 2 AKGDPEKPKGKMSAHAFFVQMCRKKHKKT-PKVPVNFAEFSKKCSERWKTMSGKEKSTFD 60
Query: 108 AKAAKRKLDYEKLMTAY 124
A K+ Y + M Y
Sbjct: 61 EMAKADKVHYNQEMKDY 77
>gi|444726214|gb|ELW66754.1| High mobility group protein B1 [Tupaia chinensis]
Length = 160
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAF +F E+R K EHP + + V K GE W + K P+E KA
Sbjct: 39 KDPNAPKRPPSAFLLFCSEYRPKIKGEHPGL-FIGDVAKKLGEMWNNTAAGGKQPYEKKA 97
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + AY K
Sbjct: 98 AKLKEKYEKDIAAYRAK 114
>gi|146218567|gb|AAI40014.1| High-mobility group box 1 [synthetic construct]
gi|146218571|gb|AAI40019.1| High-mobility group box 1 [synthetic construct]
gi|146327050|gb|AAI41845.1| High-mobility group box 1 [Homo sapiens]
Length = 215
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F E+R K EHP + ++ V K GE W + +K +E KA
Sbjct: 90 KDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQHYEKKA 148
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + AY K
Sbjct: 149 AKLKEKYEKDIAAYRAK 165
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DP KP+ S++ F++ R+ +K++HP+ S K E+WK+++ EK FE
Sbjct: 2 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K YE+ M Y
Sbjct: 62 DMAKADKARYEREMKTY 78
>gi|241122588|ref|XP_002403591.1| DNA-binding protein, putative [Ixodes scapularis]
gi|215493481|gb|EEC03122.1| DNA-binding protein, putative [Ixodes scapularis]
Length = 207
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRP SAFF F + R +QE P+ +V V K G +W + D K+ +E A
Sbjct: 91 KDPNAPKRPLSAFFWFCNDERPNVRQESPDA-SVGEVAKELGRRWNDVGDDTKSKYEGLA 149
Query: 111 AKRKLDYEKLMTAYNKKQ 128
AK K YEK + AY K+
Sbjct: 150 AKDKARYEKELKAYKNKK 167
Score = 38.9 bits (89), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 54 NKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSA-VGKAGGEKWKSLTDAEKAPFEAKAAK 112
+KP+ SA+ F++ R+ +K++HP+ V A K E+WK++++ EK F A K
Sbjct: 5 DKPRGRMSAYAFFVQTCREEHKKKHPSENVVFAEFSKKCAERWKTMSEGEKKRFHQMADK 64
Query: 113 RKLDYEKLMTAY 124
K ++ M Y
Sbjct: 65 DKKRFDSEMADY 76
>gi|442755991|gb|JAA70155.1| Putative dorsal switch protein 1 [Ixodes ricinus]
Length = 207
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRP SAFF F + R +QE P+ +V V K G +W + D K+ +E A
Sbjct: 91 KDPNAPKRPLSAFFWFCNDERPNVRQESPDA-SVGEVAKELGRRWNDVGDDTKSKYEGLA 149
Query: 111 AKRKLDYEKLMTAYNKKQ 128
AK K YEK + AY K+
Sbjct: 150 AKDKARYEKELKAYKNKK 167
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 54 NKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSA-VGKAGGEKWKSLTDAEKAPFEAKAAK 112
+KP+ SA+ F++ R+ +K++HP V A K E+WK+++D EK F A K
Sbjct: 5 DKPRGRMSAYAFFVQTCREEHKKKHPTENVVFAEFSKKCAERWKTMSDGEKKRFHQMADK 64
Query: 113 RKLDYEKLMTAY 124
K ++ M Y
Sbjct: 65 DKKRFDSEMADY 76
>gi|391344132|ref|XP_003746357.1| PREDICTED: high mobility group protein DSP1-like isoform 1
[Metaseiulus occidentalis]
gi|391344134|ref|XP_003746358.1| PREDICTED: high mobility group protein DSP1-like isoform 2
[Metaseiulus occidentalis]
Length = 187
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 46/83 (55%), Gaps = 13/83 (15%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA------VSAVGKAGGEKWKSLTDAEK 103
KKDPN PKR SAFF F ++ E P VKA V+ V K G KW+ TD +K
Sbjct: 90 KKDPNAPKRALSAFFHFCQD-------ERPKVKATLGESTVAEVAKELGRKWQDCTDEQK 142
Query: 104 APFEAKAAKRKLDYEKLMTAYNK 126
+E AAK K YE+ MTAY K
Sbjct: 143 GKYEQLAAKDKQRYEREMTAYKK 165
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 54 NKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSA-VGKAGGEKWKSLTDAEKAPFEAKAAK 112
+KP+ SA+ F++ R+ +K++HPN V A K E+WK++ + EK F AAK
Sbjct: 5 DKPRGRMSAYAYFVQTCREEHKKKHPNENVVFAEFSKKCAERWKTMNEPEKQRFHLMAAK 64
Query: 113 RKLDYEKLMTAY 124
K YE M+ Y
Sbjct: 65 DKKRYENEMSTY 76
>gi|221485710|gb|EEE23991.1| high mobility group protein, putative [Toxoplasma gondii GT1]
gi|221502922|gb|EEE28632.1| high mobility group protein, putative [Toxoplasma gondii VEG]
Length = 651
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
AKKDPN PK+P S++ F ++ R ++ P++K+ + VGK GE+W L+ ++K ++
Sbjct: 571 AKKDPNAPKKPLSSYMFFAKDKRAEILKKQPSLKSDIGKVGKMIGEEWAKLSSSQKMTYQ 630
Query: 108 AKAAKRKLDYEKLMTAYNKK 127
KA + K+ Y++ M+ YNKK
Sbjct: 631 KKAEQEKIRYQREMSLYNKK 650
>gi|57232750|ref|NP_660206.2| high mobility group protein B4 [Homo sapiens]
gi|387912835|sp|Q8WW32.2|HMGB4_HUMAN RecName: Full=High mobility group protein B4
gi|189065201|dbj|BAG34924.1| unnamed protein product [Homo sapiens]
gi|208968483|dbj|BAG74080.1| high-mobility group box 4 [synthetic construct]
Length = 186
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DP +P+RPPS+F +F ++ K+E+PN V V KA G+ W + TD EK P+E + A
Sbjct: 89 DPQEPRRPPSSFLLFCQDHYAQLKRENPNWSVVQ-VAKATGKMWSTATDLEKHPYEQRVA 147
Query: 112 KRKLDYEKLMTAYNKK 127
+ Y + + Y K+
Sbjct: 148 LLRAKYFEELELYRKQ 163
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 55 KPKRPPSAFFVFLEEFRKVYKQEHPNVK-AVSAVGKAGGEKWKSLTDAEKAPFEAKAAKR 113
KPK S++ FL +R +K++ PN + EKW+S++ EKA +EA A
Sbjct: 8 KPKANVSSYVHFLLNYRNKFKEQQPNTYVGFKEFSRKCSEKWRSISKHEKAKYEALAKLD 67
Query: 114 KLDYEKLMTAY 124
K Y++ M Y
Sbjct: 68 KARYQEEMMNY 78
>gi|205780950|sp|B2RPK0.1|HGB1A_HUMAN RecName: Full=Putative high mobility group protein B1-like 1;
AltName: Full=High mobility group protein B1 pseudogene
1; AltName: Full=Putative high mobility group protein
1-like 1; Short=HMG-1L1
gi|187950665|gb|AAI37483.1| High-mobility group box 1-like 1 [Homo sapiens]
gi|187953577|gb|AAI37484.1| High-mobility group box 1-like 1 [Homo sapiens]
Length = 211
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F E+ K EHP + ++ V K GE W + +K P E KA
Sbjct: 90 KDPNAPKRPPSAFFLFCSEYHPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPGEKKA 148
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + AY K
Sbjct: 149 AKLKEKYEKDIAAYQAK 165
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DP KP+ S++ F++ R+ +K++H + S E+WK+++ EK FE
Sbjct: 2 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHSDASVNFSEFSNKCSERWKTMSAKEKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K YE+ M Y
Sbjct: 62 DMAKADKTHYERQMKTY 78
>gi|37779034|gb|AAP20177.1| high mobility group protein [Pagrus major]
Length = 200
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F +FR K ++P + ++ K GE W S + EK P+E KA
Sbjct: 89 KDPNAPKRPPSAFFLFCADFRPKVKGDYPGL-SIGDTAKKLGEMWNSSSAEEKQPYEKKA 147
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K Y+K + AY K
Sbjct: 148 AKLKEKYDKDIVAYRTK 164
Score = 42.4 bits (98), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFEAK 109
KDP KP+ S++ F++ R+ +K++HP + K E+WK+++ EK FE
Sbjct: 3 KDPKKPRGKMSSYAYFVQTCREEHKKKHPEASVNFAEFSKRCSERWKTMSPKEKGKFEDM 62
Query: 110 AAKRKLDYEKLMTAY 124
A K+ YE+ M Y
Sbjct: 63 AKLDKVRYEREMKNY 77
>gi|426397135|ref|XP_004064781.1| PREDICTED: high mobility group protein B3-like [Gorilla gorilla
gorilla]
Length = 221
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
KKDPN KRP S FF+F EFR K +P + ++ + K GE W + +D EK P+ K
Sbjct: 106 KKDPNALKRPLSGFFLFCSEFRPKIKSTNPGI-SIGDMAKKLGEMWINYSDREKQPYITK 164
Query: 110 AAKRKLDYEKLMTAYNKK 127
AA K YEK + Y K
Sbjct: 165 AADLKEKYEKDVADYKSK 182
>gi|367012149|ref|XP_003680575.1| hypothetical protein TDEL_0C04750 [Torulaspora delbrueckii]
gi|359748234|emb|CCE91364.1| hypothetical protein TDEL_0C04750 [Torulaspora delbrueckii]
Length = 93
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKR SA+ F E R + + E+P+V VG+ GE+WK+LT EK P+E+KA
Sbjct: 17 DPNAPKRALSAYMFFANENRDIVRSENPDV-TFGQVGRLLGERWKALTPDEKTPYESKAE 75
Query: 112 KRKLDYEKLMTAYN 125
K YE YN
Sbjct: 76 ADKKRYESEKELYN 89
>gi|118343938|ref|NP_001071793.1| transcription factor protein [Ciona intestinalis]
gi|70570759|dbj|BAE06616.1| transcription factor protein [Ciona intestinalis]
Length = 164
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 58/94 (61%), Gaps = 5/94 (5%)
Query: 32 VLKASRSSNKRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAG 91
++K RSS K K +KD N PK+P +A+F+F+ + R+ +E+P++ +++ + K
Sbjct: 1 MVKTKRSSLKTLK----FRKDKNAPKKPLTAYFIFMNDCRQKVIKENPSL-SITEISKLV 55
Query: 92 GEKWKSLTDAEKAPFEAKAAKRKLDYEKLMTAYN 125
G+KW+ + +K PF KAAK + +Y K + YN
Sbjct: 56 GKKWRETSTKDKEPFNKKAAKLREEYNKKLEKYN 89
>gi|47124491|gb|AAH70148.1| High-mobility group box 4 [Homo sapiens]
Length = 112
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DP P+RPPS+F +F ++ K+E+PN V V KA G+ W + TD EK P+E + A
Sbjct: 15 DPQAPRRPPSSFLLFCQDHYAQLKRENPNWSVVQ-VAKATGKMWSTATDLEKHPYEQRVA 73
Query: 112 KRKLDYEKLMTAYNKK 127
+ Y + + Y K+
Sbjct: 74 LLRAKYFEELELYRKQ 89
>gi|344253440|gb|EGW09544.1| High mobility group protein B1 [Cricetulus griseus]
Length = 169
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KD N PKRPPSAFF+F E+ K EHP + ++ V K GEKW + +K P+E KA
Sbjct: 89 KDSNAPKRPPSAFFLFCSEYCPKIKGEHPGL-SLGDVAKKLGEKWNNTAAGDKQPYEKKA 147
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + AY K
Sbjct: 148 AKLKEKYEKDIVAYRAK 164
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DP K + S++ F++ + +K++HP+ S + K E+WK+++ EK FE
Sbjct: 2 GKGDPKKLRGKMSSYAFFVQTCWEEHKKKHPDASVNFSELLKKCSERWKTMSAKEKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K YE+ M Y
Sbjct: 62 DMAKAGKAHYEREMKTY 78
>gi|427787117|gb|JAA59010.1| Putative dorsal switch protein 1 [Rhipicephalus pulchellus]
Length = 208
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRP SAFF F + R +QE+P+ +V V K G +W + D KA +E A
Sbjct: 91 KDPNAPKRPLSAFFWFCNDERPNVRQENPDS-SVGEVAKELGRRWNEVGDDVKAKYEGLA 149
Query: 111 AKRKLDYEKLMTAY 124
AK K YEK + AY
Sbjct: 150 AKDKARYEKELKAY 163
Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 54 NKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSA-VGKAGGEKWKSLTDAEKAPFEAKAAK 112
+KP+ SA+ F++ R+ +K++HPN V A K E+WK+++D EK F A K
Sbjct: 5 DKPRGRMSAYAFFVQTCREEHKKKHPNENVVFAEFSKKCAERWKTMSDGEKKRFHQMADK 64
Query: 113 RKLDYEKLMTAY 124
K ++ M Y
Sbjct: 65 DKKRFDTEMADY 76
>gi|391344136|ref|XP_003746359.1| PREDICTED: high mobility group protein DSP1-like isoform 3
[Metaseiulus occidentalis]
Length = 202
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 46/83 (55%), Gaps = 13/83 (15%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA------VSAVGKAGGEKWKSLTDAEK 103
KKDPN PKR SAFF F ++ E P VKA V+ V K G KW+ TD +K
Sbjct: 105 KKDPNAPKRALSAFFHFCQD-------ERPKVKATLGESTVAEVAKELGRKWQDCTDEQK 157
Query: 104 APFEAKAAKRKLDYEKLMTAYNK 126
+E AAK K YE+ MTAY K
Sbjct: 158 GKYEQLAAKDKQRYEREMTAYKK 180
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 46 VKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSA-VGKAGGEKWKSLTDAEKA 104
+K AK D KP+ SA+ F++ R+ +K++HPN V A K E+WK++ + EK
Sbjct: 14 LKMAKGD--KPRGRMSAYAYFVQTCREEHKKKHPNENVVFAEFSKKCAERWKTMNEPEKQ 71
Query: 105 PFEAKAAKRKLDYEKLMTAY 124
F AAK K YE M+ Y
Sbjct: 72 RFHLMAAKDKKRYENEMSTY 91
>gi|109469081|ref|XP_001074673.1| PREDICTED: high mobility group protein B1-like [Rattus norvegicus]
gi|293346414|ref|XP_002726304.1| PREDICTED: high mobility group protein B1-like [Rattus norvegicus]
gi|392346830|ref|XP_003749644.1| PREDICTED: high mobility group protein B1-like [Rattus norvegicus]
Length = 213
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 44/77 (57%), Gaps = 2/77 (2%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAF +F E+R K EHP + ++ V K GE W + +K P E A
Sbjct: 90 KDPNAPKRPPSAF-LFCSEYRPKIKGEHPAL-SIGDVTKKLGEVWTNTASDDKQPCEKMA 147
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK AY K
Sbjct: 148 AKLKEKYEKDTAAYRAK 164
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DP KP+ S++ F++ R+ +K++HP+ S K E+WK+++ EK FE
Sbjct: 2 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKAMSAKEKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K YE+ M Y
Sbjct: 62 DMAKADKARYEREMKTY 78
>gi|478813|pir||S29857 nonhistone chromosomal protein HMG-1 - human
gi|184251|gb|AAA64970.1| HMG-1 [Homo sapiens]
Length = 216
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKR PSAFF+F E+R K EHP + ++ V K GE W + +K P+E KA
Sbjct: 90 KDPNAPKRLPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKA 148
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + AY K
Sbjct: 149 AKLKEKYEKDIAAYRAK 165
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DP KP S++ F++ R+ +K++HP+ S K E+WK+++ EK FE
Sbjct: 2 GKGDPKKPTGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K YE+ M Y
Sbjct: 62 DMAKADKARYEREMKTY 78
>gi|297303892|ref|XP_002806292.1| PREDICTED: high mobility group-T protein-like [Macaca mulatta]
Length = 159
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 48/78 (61%), Gaps = 4/78 (5%)
Query: 51 KDPNKPKRPPSAFFVFL-EEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
KDPN PKRPP AFF+F E+ K+ +EHP + +VS V K GE W + +K P+E K
Sbjct: 55 KDPNAPKRPPLAFFMFSSEDCPKI--KEHPGL-SVSDVAKKLGEMWNYTAEDDKHPYEKK 111
Query: 110 AAKRKLDYEKLMTAYNKK 127
A K K YEK + A+ K
Sbjct: 112 AVKLKEKYEKDIAAFGGK 129
>gi|119584724|gb|EAW64320.1| hCG26831 [Homo sapiens]
Length = 212
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKR PSAFF+F E+R K EHP + ++ V K GE W + +K P+E KA
Sbjct: 90 KDPNAPKRLPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKA 148
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + AY K
Sbjct: 149 AKLKEKYEKDIAAYRAK 165
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DP KP S++ F++ R+ +K++HP+ S K E+WK+++ EK FE
Sbjct: 2 GKGDPKKPTGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K YE+ M Y
Sbjct: 62 DMAKADKARYEREMKTY 78
>gi|395732940|ref|XP_002813012.2| PREDICTED: nuclear autoantigen Sp-100-like [Pongo abelii]
Length = 263
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKRPP AFF+F E+R K EHP + V K G W + A+K +E KAA
Sbjct: 150 DPNAPKRPPLAFFLFCSEYRPKIKGEHPGLSIDDVVKKLAG-MWNNTAAADKQFYENKAA 208
Query: 112 KRKLDYEKLMTAYNKK 127
+ K Y+K + AY K
Sbjct: 209 RLKEKYKKDIAAYRAK 224
>gi|229368114|gb|ACQ59037.1| High mobility group protein B1 [Anoplopoma fimbria]
Length = 206
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F E+R K E P + V K GE W ++ PFE KA
Sbjct: 89 KDPNAPKRPPSAFFIFCAEYRPKVKGETPGA-TIGDVAKRLGEMWNGTASEDRQPFEKKA 147
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + AY K
Sbjct: 148 AKLKEKYEKEVAAYRAK 164
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFEAK 109
K+ KPK S++ F++ R+ +K++HP S K E+WK+++ EK FE
Sbjct: 3 KELGKPKGKMSSYAYFVQTCREEHKKKHPEASVNFSEFSKKCSERWKTMSLKEKGKFEDL 62
Query: 110 AAKRKLDYEKLMTAY 124
A + K YE+ M +Y
Sbjct: 63 ARQDKARYEREMMSY 77
>gi|237842875|ref|XP_002370735.1| high mobility group protein, putative [Toxoplasma gondii ME49]
gi|211968399|gb|EEB03595.1| high mobility group protein, putative [Toxoplasma gondii ME49]
Length = 644
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
AKKDPN PK+P S++ F ++ R ++ P +K+ + VGK GE+W L+ ++K ++
Sbjct: 564 AKKDPNAPKKPLSSYMFFAKDKRAEILKKQPTLKSDIGKVGKMIGEEWAKLSSSQKMTYQ 623
Query: 108 AKAAKRKLDYEKLMTAYNKK 127
KA + K+ Y++ M+ YNKK
Sbjct: 624 KKAEQEKIRYQREMSLYNKK 643
>gi|26342222|dbj|BAC34773.1| unnamed protein product [Mus musculus]
Length = 215
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKR PSAFF+F E+R K EHP + ++ V K GE W + +K P+E KA
Sbjct: 90 KDPNAPKRLPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKA 148
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + AY K
Sbjct: 149 AKLKEKYEKDIAAYRAK 165
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DP KP+ S++ F++ R+ +K++HP+ S K E+WK+++ EK FE
Sbjct: 2 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K YE+ M Y
Sbjct: 62 DMAKADKARYEREMKTY 78
>gi|256090348|ref|XP_002581158.1| SWI/SNF-related chromatin binding protein [Schistosoma mansoni]
gi|350646061|emb|CCD59339.1| SWI/SNF-related chromatin binding protein [Schistosoma mansoni]
Length = 293
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDP+ PKR SAFF F + FR + EHP+ K VS + K G +W+ +D EK +E +A
Sbjct: 94 KDPSMPKRSWSAFFFFCDAFRSKIRSEHPDWK-VSDIAKELGRRWEECSDKEK--YERRA 150
Query: 111 AKRKLDYEKLMTAYNKKQY 129
KL YE+ M Y Y
Sbjct: 151 QNDKLRYEQDMEKYKAGLY 169
Score = 39.7 bits (91), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAV-SAVGKAGGEKWKSLTDAEKAPFEAK 109
KD N+PK P + + F++ R+ ++++HP + S K EKWK + ++ FE
Sbjct: 4 KDKNRPKPPMTPYACFVQVIREEHRKKHPTENVIFSEFSKKCAEKWKLMNMEQRKCFEEM 63
Query: 110 AAKRKLDYEKL 120
A KLD E+
Sbjct: 64 A---KLDTERF 71
>gi|281350894|gb|EFB26478.1| hypothetical protein PANDA_002732 [Ailuropoda melanoleuca]
Length = 157
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F E+R K EHP + ++ V K GE W + +K P+E KA
Sbjct: 90 KDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKA 148
Query: 111 AKRKLDYEK 119
AK K YEK
Sbjct: 149 AKLKEKYEK 157
Score = 39.7 bits (91), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DP K + S++ F++ R+ +K++HP+ S K E+WK+++ EK FE
Sbjct: 2 GKGDPKKLRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K YE+ M Y
Sbjct: 62 DMAKADKARYEREMKTY 78
>gi|56756178|gb|AAW26264.1| SJCHGC08557 protein [Schistosoma japonicum]
Length = 177
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDP+ PKR SAFF F + FR + EHP+ K VS + K G +W+ +D EK +E +A
Sbjct: 94 KDPSMPKRSWSAFFFFCDAFRSKIRSEHPDWK-VSDIAKELGRRWEECSDKEK--YEQRA 150
Query: 111 AKRKLDYEKLMTAY 124
KL YE+ M Y
Sbjct: 151 QNDKLRYEQDMQKY 164
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAV-SAVGKAGGEKWKSLTDAEKAPFEAK 109
KD N+PK P + F++ R+ ++++HP + S K EKWK + ++ FE
Sbjct: 4 KDKNRPKPPMKPYACFVQVIREEHRKKHPTENVIFSEFSKKCAEKWKLMNMEQRKCFEEM 63
Query: 110 AAKRKLDYEKL 120
A KLD E+
Sbjct: 64 A---KLDTERF 71
>gi|452988900|gb|EME88655.1| hypothetical protein MYCFIDRAFT_57980 [Pseudocercospora fijiensis
CIRAD86]
Length = 108
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 53 PNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAK 112
PN PKR SA+ F E R + E+P +K VGK GEKWK+L + +KAP+EAKAA
Sbjct: 27 PNMPKRGLSAYMFFANEQRDKVRDENPGIK-FGEVGKMLGEKWKALGEKQKAPYEAKAAA 85
Query: 113 RKLDYEKLMTAYN 125
K YE+ AY
Sbjct: 86 DKKRYEEEKAAYT 98
>gi|302684321|ref|XP_003031841.1| hypothetical protein SCHCODRAFT_76744 [Schizophyllum commune H4-8]
gi|300105534|gb|EFI96938.1| hypothetical protein SCHCODRAFT_76744 [Schizophyllum commune H4-8]
Length = 114
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 56/92 (60%), Gaps = 1/92 (1%)
Query: 37 RSSNKRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWK 96
+++ K K + AKKDPN PKR SA+ F +++R+ K E+P+ + +GK G KWK
Sbjct: 12 KAATKSEKTPRKAKKDPNAPKRALSAYMFFSQDWRERVKAENPDA-SFGELGKILGAKWK 70
Query: 97 SLTDAEKAPFEAKAAKRKLDYEKLMTAYNKKQ 128
+ + EK P+ AKAAK K E AY++K+
Sbjct: 71 EMDEDEKKPYVAKAAKDKERAEADKAAYDEKK 102
>gi|355754606|gb|EHH58507.1| hypothetical protein EGM_08375 [Macaca fascicularis]
Length = 263
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F E+R K EHP + ++ V K GE W + +K P+E KA
Sbjct: 90 KDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKA 148
Query: 111 AKRKLDYEKL 120
AK K YEK
Sbjct: 149 AKLKEKYEKF 158
Score = 42.4 bits (98), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DP KP+ S++ F++ R+ +K++HP+ S K E+WK+++ EK FE
Sbjct: 2 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K YE+ M Y
Sbjct: 62 DMAKADKARYEREMKTY 78
>gi|355700906|gb|EHH28927.1| hypothetical protein EGK_09214, partial [Macaca mulatta]
Length = 263
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F E+R K EHP + ++ V K GE W + +K P+E KA
Sbjct: 90 KDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKA 148
Query: 111 AKRKLDYEKL 120
AK K YEK
Sbjct: 149 AKLKEKYEKF 158
Score = 45.1 bits (105), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DPNKP+ S++ F++ R+ +K++HP+ S K E+WK+++ EK FE
Sbjct: 2 GKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K YE+ M Y
Sbjct: 62 DMAKADKARYEREMKTY 78
>gi|183212219|gb|ACC54772.1| high mobility group box 3 [Xenopus borealis]
Length = 152
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPF 106
DPN PKRPPS FF+F EFR K +P + + V K GE W +L D+EK P+
Sbjct: 97 DPNAPKRPPSGFFLFCSEFRPNIKSTNPGI-TIGDVAKKLGEMWNNLGDSEKQPY 150
>gi|444727982|gb|ELW68448.1| High mobility group protein B1 [Tupaia chinensis]
Length = 165
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 50/94 (53%), Gaps = 9/94 (9%)
Query: 27 GKRKAVLKASRSSNKRT--------KNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEH 78
GK +A+ K ++ +KR K DPN PKRPPSAF +F E+R K EH
Sbjct: 46 GKFEAMAKVDKACDKREVKTYIPPKGETKEKFTDPNAPKRPPSAFSLFCSEYRPKIKGEH 105
Query: 79 PNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAK 112
P + ++ V K GE W + +K P+E KAAK
Sbjct: 106 PGL-SIGDVAKKLGEMWNNTAADDKQPYEKKAAK 138
>gi|71662243|ref|XP_818131.1| high mobility group protein [Trypanosoma cruzi strain CL Brener]
gi|70883364|gb|EAN96280.1| high mobility group protein, putative [Trypanosoma cruzi]
Length = 270
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 46/73 (63%), Gaps = 5/73 (6%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KD N PKR SA+F F+ +FRK +HP++ +V+ KA G WK+L+D K P+EA A
Sbjct: 200 KDENAPKRSMSAYFFFVSDFRK----KHPDL-SVTETSKAAGAAWKALSDDMKKPYEAMA 254
Query: 111 AKRKLDYEKLMTA 123
K K Y++ M A
Sbjct: 255 QKDKERYQREMAA 267
>gi|255936601|ref|XP_002559327.1| Pc13g09020 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211583947|emb|CAP91971.1| Pc13g09020 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 108
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 44 KNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEK 103
K V+ KKDPN PKR SA+ F + R ++E+P + + VGK G+KWK+L++ ++
Sbjct: 16 KRVQRRKKDPNAPKRGLSAYMFFANDNRDKVREENPGI-SFGQVGKQLGDKWKALSETDR 74
Query: 104 APFEAKAAKRKLDYEKLMTAY 124
P++ KAA K YE+ AY
Sbjct: 75 KPYDDKAAADKKRYEEEKAAY 95
>gi|218117885|dbj|BAH03305.1| structure-specific recognition protein 1 [Gallus gallus]
Length = 706
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 2/85 (2%)
Query: 42 RTKNVKSAK-KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTD 100
R K V+S K KDPN PKRP SA+ ++L R+ K +HP + +++ + K GE WK+++
Sbjct: 530 RKKQVESKKGKDPNAPKRPMSAYMLWLNANREKIKSDHPGI-SITDLSKKAGELWKAMSK 588
Query: 101 AEKAPFEAKAAKRKLDYEKLMTAYN 125
+K ++ KA K DYEK M Y+
Sbjct: 589 EKKEEWDRKAEDAKRDYEKAMKEYS 613
>gi|18088957|gb|AAH21180.1| High-mobility group box 4 [Homo sapiens]
gi|312150396|gb|ADQ31710.1| high-mobility group box 4 [synthetic construct]
Length = 186
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DP P+RPPS+F +F ++ K+E+PN V V KA G+ W + TD EK P+E + A
Sbjct: 89 DPQAPRRPPSSFLLFCQDHYAQLKRENPNWSVVQ-VAKATGKMWSTATDLEKHPYEQRVA 147
Query: 112 KRKLDYEKLMTAYNKK 127
+ Y + + Y K+
Sbjct: 148 LLRAKYFEELELYRKQ 163
Score = 37.7 bits (86), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 55 KPKRPPSAFFVFLEEFRKVYKQEHPNVK-AVSAVGKAGGEKWKSLTDAEKAPFEAKAAKR 113
KPK S++ FL +R +K++ P+ + EKW+S++ EKA +EA A
Sbjct: 8 KPKANVSSYVHFLLNYRNKFKEQQPSTYVGFKEFSRKCSEKWRSISKHEKAKYEALAKLD 67
Query: 114 KLDYEKLMTAY 124
K Y++ M Y
Sbjct: 68 KARYQEEMMNY 78
>gi|355757371|gb|EHH60896.1| hypothetical protein EGM_18788, partial [Macaca fascicularis]
Length = 189
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 48/78 (61%), Gaps = 4/78 (5%)
Query: 51 KDPNKPKRPPSAFFVFL-EEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
KDPN PKRPP AFF+F E+ K+ +EHP + +VS V K GE W + +K P+E K
Sbjct: 86 KDPNAPKRPPLAFFMFSSEDCPKI--KEHPGL-SVSDVAKKLGEMWNYTAEDDKHPYEKK 142
Query: 110 AAKRKLDYEKLMTAYNKK 127
A K K YEK + A+ K
Sbjct: 143 AVKLKEKYEKDIAAFGGK 160
>gi|110808604|gb|ABB22048.1| HMBG4 [Homo sapiens]
gi|119627858|gb|EAX07453.1| high-mobility group box 4 [Homo sapiens]
Length = 186
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DP P+RPPS+F +F ++ K+E+PN V V KA G+ W + TD EK P+E + A
Sbjct: 89 DPQAPRRPPSSFLLFCQDHYAQLKRENPNWSVVQ-VAKATGKMWSTATDLEKHPYEQRVA 147
Query: 112 KRKLDYEKLMTAYNKK 127
+ Y + + Y K+
Sbjct: 148 LLRAKYFEELELYRKQ 163
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 55 KPKRPPSAFFVFLEEFRKVYKQEHPNVK-AVSAVGKAGGEKWKSLTDAEKAPFEAKAAKR 113
KPK S++ FL +R +K++ PN + EKW+S++ EKA +EA A
Sbjct: 8 KPKANVSSYVHFLLNYRNKFKEQQPNTYVGFKEFSRKCSEKWRSISKHEKAKYEALAKLD 67
Query: 114 KLDYEKLMTAY 124
K Y++ M Y
Sbjct: 68 KARYQEEMMNY 78
>gi|403286915|ref|XP_003934714.1| PREDICTED: high mobility group protein B1-like isoform 1 [Saimiri
boliviensis boliviensis]
gi|403286917|ref|XP_003934715.1| PREDICTED: high mobility group protein B1-like isoform 2 [Saimiri
boliviensis boliviensis]
gi|403286919|ref|XP_003934716.1| PREDICTED: high mobility group protein B1-like isoform 3 [Saimiri
boliviensis boliviensis]
gi|403286921|ref|XP_003934717.1| PREDICTED: high mobility group protein B1-like isoform 4 [Saimiri
boliviensis boliviensis]
Length = 206
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPP AFF+F E+R K E+P + ++ V K GE W + +K P+E KA
Sbjct: 90 KDPNAPKRPPLAFFLFCSEYRPKIKGEYPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKA 148
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + AY K
Sbjct: 149 AKLKEKYEKDIAAYRAK 165
Score = 35.8 bits (81), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DP K + S+ F++ R+ +K++HP+ S K E+WK+++ EK E
Sbjct: 2 GKGDPKKLRGKMSSCAFFVQTCREEHKKQHPDSSVNFSEFSKKCSERWKTMSAKEKGKVE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K YE+ M Y
Sbjct: 62 DMAKADKARYEREMKTY 78
>gi|326920276|ref|XP_003206400.1| PREDICTED: FACT complex subunit SSRP1-like [Meleagris gallopavo]
Length = 706
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 2/85 (2%)
Query: 42 RTKNVKSAK-KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTD 100
R K V+S K KDPN PKRP SA+ ++L R+ K +HP + +++ + K GE WK+++
Sbjct: 530 RKKQVESKKGKDPNAPKRPMSAYMLWLNANREKIKSDHPGI-SITDLSKKAGELWKAMSK 588
Query: 101 AEKAPFEAKAAKRKLDYEKLMTAYN 125
+K ++ KA K DYEK M Y+
Sbjct: 589 EKKEEWDRKAEDAKRDYEKAMKEYS 613
>gi|57524786|ref|NP_001005796.1| FACT complex subunit SSRP1 [Gallus gallus]
gi|110283005|sp|Q04678.2|SSRP1_CHICK RecName: Full=FACT complex subunit SSRP1; AltName: Full=Facilitates
chromatin transcription complex subunit SSRP1; AltName:
Full=Recombination signal sequence recognition protein
1; AltName: Full=Structure-specific recognition protein
1; AltName: Full=T160
gi|53128417|emb|CAG31300.1| hypothetical protein RCJMB04_4n20 [Gallus gallus]
Length = 706
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 2/85 (2%)
Query: 42 RTKNVKSAK-KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTD 100
R K V+S K KDPN PKRP SA+ ++L R+ K +HP + +++ + K GE WK+++
Sbjct: 530 RKKQVESKKGKDPNAPKRPMSAYMLWLNANREKIKSDHPGI-SITDLSKKAGELWKAMSK 588
Query: 101 AEKAPFEAKAAKRKLDYEKLMTAYN 125
+K ++ KA K DYEK M Y+
Sbjct: 589 EKKEEWDRKAEDAKRDYEKAMKEYS 613
>gi|444708344|gb|ELW49421.1| High mobility group protein B1 [Tupaia chinensis]
Length = 302
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 48/77 (62%), Gaps = 2/77 (2%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F ++R K EHP + ++ V K GE W + +K P+E KA
Sbjct: 90 KDPNAPKRPPSAFFLFCSDYRPKIK-EHPGL-SIGDVAKKLGEMWNNTATDDKQPYEKKA 147
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + AY K
Sbjct: 148 AKLKEKYEKDIAAYQAK 164
Score = 42.0 bits (97), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DP KP+ S++ F++ ++ +K+EHP V S K E+WK ++ +K FE
Sbjct: 2 GKGDPKKPRGKMSSYAFFVQTCQEEHKKEHPGVSVNFSEFSKKCSERWKIMSAKKKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K+ YE+ + Y
Sbjct: 62 DTAKADKVHYEREIKTY 78
>gi|426328852|ref|XP_004065350.1| PREDICTED: LOW QUALITY PROTEIN: high mobility group protein B4
[Gorilla gorilla gorilla]
Length = 186
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DP P+RPPS+F +F ++ K+E+PN V V KA G+ W + TD EK P+E + A
Sbjct: 89 DPQAPRRPPSSFLLFCQDHYAQLKRENPNWSVVQ-VAKATGKMWSTATDLEKHPYEQRVA 147
Query: 112 KRKLDYEKLMTAYNKK 127
+ Y + + Y K+
Sbjct: 148 LLRAKYFEELELYRKQ 163
Score = 40.0 bits (92), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 55 KPKRPPSAFFVFLEEFRKVYKQEHPNVK-AVSAVGKAGGEKWKSLTDAEKAPFEAKAAKR 113
KPK S++ FL +R +K++ PN + EKW+S++ EKA +EA A
Sbjct: 8 KPKANVSSYVHFLLNYRNKFKEQQPNTYVGFKEFSRKCSEKWRSISKHEKAKYEALAKLD 67
Query: 114 KLDYEKLMTAY 124
K Y++ M Y
Sbjct: 68 KARYQEEMMNY 78
>gi|97976795|tpe|CAJ29302.1| TPA: putative high mobility group B3 protein [Schistosoma mansoni]
Length = 246
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDP+ PKR SAFF F + FR + EHP+ K VS + K G +W+ +D EK +E +A
Sbjct: 94 KDPSMPKRSWSAFFFFCDAFRSKIRSEHPDWK-VSDIAKELGRRWEECSDKEK--YERRA 150
Query: 111 AKRKLDYEKLMTAYNKKQY 129
KL YE+ M Y Y
Sbjct: 151 QNDKLRYEQDMEKYKAGLY 169
Score = 39.3 bits (90), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAV-SAVGKAGGEKWKSLTDAEKAPFEAK 109
KD N+PK P + + F++ R+ ++++HP + S K EKWK + ++ FE
Sbjct: 4 KDKNRPKPPMTPYACFVQVIREEHRKKHPTENVIFSEFSKKCAEKWKLMNMEQRKCFEEM 63
Query: 110 AAKRKLDYEKL 120
A KLD E+
Sbjct: 64 A---KLDTERF 71
>gi|992639|gb|AAB08831.1| high mobility group protein-2 (HMG-2) [Ambystoma mexicanum]
Length = 216
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 44/77 (57%), Gaps = 2/77 (2%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAP-FEAKA 110
DPN PKR PSAFF+F E R K + P + ++ K GEKW T +K P FE KA
Sbjct: 92 DPNAPKRLPSAFFLFCSEHRLKIKADCPGL-SIGDTAKKLGEKWSEQTPKDKIPSFEQKA 150
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + AY K
Sbjct: 151 AKLKEKYEKDIAAYRAK 167
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DPNKP+ S++ F++ R+ +K++HP+ + K E+WK++ EK FE
Sbjct: 2 GKGDPNKPRGKMSSYAYFVQTCREEHKKKHPDASVNFAEFSKKCSERWKTMNAKEKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K+ Y++ M +Y
Sbjct: 62 DMAKGDKVRYDREMKSY 78
>gi|336373684|gb|EGO02022.1| hypothetical protein SERLA73DRAFT_177720 [Serpula lacrymans var.
lacrymans S7.3]
gi|336386499|gb|EGO27645.1| hypothetical protein SERLADRAFT_461466 [Serpula lacrymans var.
lacrymans S7.9]
Length = 365
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 50/82 (60%), Gaps = 11/82 (13%)
Query: 44 KNVKSAKKDPNKPKRPPSAFFVFLEEFR-------KVYKQEHPNVKAVSAVGKAGGEKWK 96
K+ KS KDPN PK+P SA+F+FL+ R +V+ +E K S + A KW+
Sbjct: 225 KSRKSNIKDPNAPKKPLSAYFMFLQRIRSEPALVREVFGEEQETTKQ-SVLAAA---KWR 280
Query: 97 SLTDAEKAPFEAKAAKRKLDYE 118
S+TD E+ PF A+A + KLDYE
Sbjct: 281 SMTDDERKPFLAQAEQEKLDYE 302
>gi|158300246|ref|XP_320213.4| AGAP012335-PA [Anopheles gambiae str. PEST]
gi|157013066|gb|EAA00360.4| AGAP012335-PA [Anopheles gambiae str. PEST]
Length = 728
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 47/73 (64%), Gaps = 3/73 (4%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKRP +AF +F+ R+ K++ P + +++ + K GGE WK L D K +EAKAA
Sbjct: 563 DPNAPKRPSTAFMLFMNASREQIKKDFPGL-SITEMSKKGGELWKELKD--KKEWEAKAA 619
Query: 112 KRKLDYEKLMTAY 124
K K DY + M A+
Sbjct: 620 KAKDDYTEAMAAW 632
>gi|451847653|gb|EMD60960.1| hypothetical protein COCSADRAFT_98214 [Cochliobolus sativus ND90Pr]
Length = 106
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKR SA+ F E R+ ++++P +K VGK GEKWK+L + ++ P+EAKAA
Sbjct: 24 DPNAPKRGLSAYMFFANEQREKVREDNPGIK-FGEVGKLLGEKWKALNEKQRQPYEAKAA 82
Query: 112 KRKLDYEKLMTAY 124
K YE+ AY
Sbjct: 83 LDKKRYEQEKAAY 95
>gi|358337868|dbj|GAA37121.2| high mobility group protein B1, partial [Clonorchis sinensis]
Length = 378
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDP PKR SAFF F + FR + EHP+ K VS + K G +W+ TD EK +E A
Sbjct: 100 KDPAMPKRSWSAFFFFCDAFRSKIRNEHPDWK-VSDIAKELGRRWEECTDKEK--YERHA 156
Query: 111 AKRKLDYEKLMTAYNKKQY 129
KL YE+ M Y Y
Sbjct: 157 QNDKLRYEQDMQKYKAGIY 175
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 4/71 (5%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAV-SAVGKAGGEKWKSLTDAEKAPFEAK 109
KD N+PK P SA+ F++ R+ ++++HPN + S K EKWK +++ ++ FE
Sbjct: 10 KDKNRPKHPMSAYACFVQVIREEHRKKHPNENVIFSEFSKKCAEKWKQMSNEQRRCFEEM 69
Query: 110 AAKRKLDYEKL 120
A KLD ++
Sbjct: 70 A---KLDLDRF 77
>gi|148668679|gb|EDL00993.1| mCG49874 [Mus musculus]
Length = 140
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 53 PNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAK 112
PN PKRPPSAFF+F E R K +HP + ++ K G W + +K P+E KAAK
Sbjct: 41 PNAPKRPPSAFFLFCSENRPEIKIDHPGL-SIGDTSKKLGVMWSEQSAKDKQPYEQKAAK 99
Query: 113 RKLDYEKLMTAYNKK 127
K YEK + A+ K
Sbjct: 100 PKEKYEKDIAAFRAK 114
>gi|71416266|ref|XP_810170.1| high mobility group protein [Trypanosoma cruzi strain CL Brener]
gi|70874664|gb|EAN88319.1| high mobility group protein, putative [Trypanosoma cruzi]
Length = 270
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 45/73 (61%), Gaps = 5/73 (6%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KD N PKR SA+F F+ +FRK +HP++ +V+ KA G WK L+D K P+EA A
Sbjct: 200 KDENAPKRSMSAYFFFVSDFRK----KHPDL-SVTETSKAAGAAWKELSDEMKKPYEAMA 254
Query: 111 AKRKLDYEKLMTA 123
K K Y++ M A
Sbjct: 255 QKDKERYQREMAA 267
>gi|412992276|emb|CCO19989.1| nucleosome binding protein [Bathycoccus prasinos]
Length = 94
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKR SA+F F+ + R + +P++K V+ VGK GE W++++D+EK P+ KA
Sbjct: 20 DPNAPKRNLSAYFFFMNDQRAKVVKANPDMK-VTEVGKKLGELWRAMSDSEKVPYNKKAD 78
Query: 112 KRKLDYEKLMTAY 124
K+ YEK AY
Sbjct: 79 ADKVRYEKAKAAY 91
>gi|441618163|ref|XP_003271355.2| PREDICTED: high mobility group protein B3-like [Nomascus
leucogenys]
Length = 206
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PK P S FF+F EF K P + ++ V K GE W +L D+EK P+ KAA
Sbjct: 95 DPNAPKMPQSGFFLFCSEFCLKIKSTKPGI-SIGDVAKKLGEMWNNLNDSEKQPYITKAA 153
Query: 112 KRKLDYEKLMTAYNKK 127
KL YEK + Y K
Sbjct: 154 --KLKYEKDVADYKSK 167
>gi|145356938|ref|XP_001422680.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144582923|gb|ABP00997.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 622
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEA 108
AKKDPN PKR SA+ F R +P+ V+ V KA GEKWK++TD EK+ ++
Sbjct: 516 AKKDPNAPKRGLSAYMFFSAAKRAEITAANPSF-GVTDVAKALGEKWKTITDEEKSVYQQ 574
Query: 109 KAAKRKLDYEKLMTAY 124
+A + K+ YE+ M AY
Sbjct: 575 QADEDKIRYEREMEAY 590
>gi|440298682|gb|ELP91313.1| hypothetical protein EIN_153200 [Entamoeba invadens IP1]
Length = 185
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPNKPK+P +A+ ++L E R K++ P++K V+ V K GE WK++ + +K P++ KA
Sbjct: 96 DPNKPKKPQTAYMLYLNEHRAEIKEKFPDMK-VTEVAKKAGENWKAMGEEDKKPYQDKAD 154
Query: 112 KRKLDYEKLMTAYNKK 127
K K ++ M Y +K
Sbjct: 155 KAKETWKTEMKKYEEK 170
>gi|159476440|ref|XP_001696319.1| high mobility group protein [Chlamydomonas reinhardtii]
gi|158282544|gb|EDP08296.1| high mobility group protein [Chlamydomonas reinhardtii]
Length = 179
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PK+P ++F F R+ K E+P + A VGK GEKWK L+ +K ++ KAA
Sbjct: 57 DPNAPKKPLTSFMYFSNAIRESVKSENPGI-AFGEVGKVIGEKWKGLSADDKKEYDEKAA 115
Query: 112 KRKLDYEKLMTAYN 125
K K Y+K M +Y
Sbjct: 116 KDKERYQKEMESYG 129
>gi|211520|gb|AAA48685.1| HMG box (bp. 1499..1757), partial [Gallus gallus]
Length = 669
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 2/85 (2%)
Query: 42 RTKNVKSAK-KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTD 100
R K V+S K KDPN PKRP SA+ ++L R+ K +HP + +++ + K GE WK+++
Sbjct: 493 RKKQVESKKGKDPNVPKRPMSAYMLWLNANREKIKSDHPGI-SITDLSKKAGELWKAMSK 551
Query: 101 AEKAPFEAKAAKRKLDYEKLMTAYN 125
+K ++ KA K DYEK M Y+
Sbjct: 552 EKKEEWDRKAEDAKRDYEKAMKEYS 576
>gi|238486744|ref|XP_002374610.1| nucleosome binding protein (Nhp6a), putative [Aspergillus flavus
NRRL3357]
gi|317144043|ref|XP_003189559.1| non-histone chromosomal protein 6 [Aspergillus oryzae RIB40]
gi|220699489|gb|EED55828.1| nucleosome binding protein (Nhp6a), putative [Aspergillus flavus
NRRL3357]
Length = 104
Score = 59.3 bits (142), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 46 VKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAP 105
V+ KKDPN PKR SA+ F + R+ ++E+P + + VGK GEKWK+L++A++ P
Sbjct: 15 VERKKKDPNAPKRGLSAYMFFANDNREKVREENPGI-SFGQVGKMLGEKWKALSEADRRP 73
Query: 106 FEAKAAKRKLDY 117
+E KAA K Y
Sbjct: 74 YEDKAAADKKRY 85
>gi|109001746|ref|XP_001107984.1| PREDICTED: high mobility group protein B4-like [Macaca mulatta]
gi|67968844|dbj|BAE00779.1| unnamed protein product [Macaca fascicularis]
Length = 191
Score = 59.3 bits (142), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DP P+RPPS+F +F ++ K+E+P+ V V KA G+ W + TD EK P+E +AA
Sbjct: 91 DPQAPRRPPSSFLLFCQDHYAQLKRENPSWSVVQ-VAKATGKMWSATTDLEKHPYEQRAA 149
Query: 112 KRKLDYEKLMTAYNKK 127
+ Y + + Y K+
Sbjct: 150 LLRAKYFEELELYRKQ 165
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 55 KPKRPPSAFFVFLEEFRKVYKQEHPNVK-AVSAVGKAGGEKWKSLTDAEKAPFEAKAAKR 113
KPK S++ FL +R +K++ PN + EKW+S++ EKA +EA A
Sbjct: 10 KPKANVSSYIHFLLNYRNKFKEQQPNTYVGFKEFSRKCSEKWRSISKHEKAKYEALAKLD 69
Query: 114 KLDYEKLMTAY 124
K Y++ M Y
Sbjct: 70 KARYQEEMMNY 80
>gi|444725503|gb|ELW66067.1| Trem-like transcript 1 protein [Tupaia chinensis]
Length = 668
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKR PS FF+F EFR K +P + ++ V K GE W +L+D+EK P+ A
Sbjct: 586 DPNAPKRRPSVFFLFCSEFRLKIKSTNPGI-SIGDVAKKLGEMWNNLSDSEKQPYITNGA 644
Query: 112 K 112
K
Sbjct: 645 K 645
>gi|444716453|gb|ELW57303.1| High mobility group protein B1 [Tupaia chinensis]
Length = 213
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 48/78 (61%), Gaps = 4/78 (5%)
Query: 51 KDPNKPKRPPSAFFVFLEEFR-KVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
KDPN PKRPPSAFF+F E+R K+ +EHP + ++ V K E W ++ K +E K
Sbjct: 77 KDPNAPKRPPSAFFLFCSEYRPKI--REHPGL-SIGDVAKKLEEMWNNIAADGKQSYEKK 133
Query: 110 AAKRKLDYEKLMTAYNKK 127
AAK K Y K +TA+ K
Sbjct: 134 AAKLKGKYRKDITAFQGK 151
>gi|296224352|ref|XP_002758030.1| PREDICTED: high mobility group protein B1-like isoform 1
[Callithrix jacchus]
gi|390474708|ref|XP_003734829.1| PREDICTED: high mobility group protein B1-like isoform 2
[Callithrix jacchus]
Length = 215
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKR PS FF+F E+R K EHP + ++ V K GE W + +K P+E KA
Sbjct: 90 KDPNAPKRTPSVFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKA 148
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + AY K
Sbjct: 149 AKLKEKYEKDIAAYRAK 165
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DP KP+ S++ F++ R+ +K++HP+ S K E+WK+++ EK FE
Sbjct: 2 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K YE+ M Y
Sbjct: 62 DMAKADKARYEREMKTY 78
>gi|124805429|ref|XP_001350438.1| high mobility group protein [Plasmodium falciparum 3D7]
gi|6525222|gb|AAF15357.1|AF201952_1 high mobility group protein [Plasmodium falciparum]
gi|23496560|gb|AAN36118.1|AE014844_29 high mobility group protein [Plasmodium falciparum 3D7]
Length = 97
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 48/85 (56%), Gaps = 5/85 (5%)
Query: 41 KRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNV-KAVSAVGKAGGEKWKSLT 99
KR KN KKDP+ PKR SA+ F +E R + P + K V+ VGK GE W L
Sbjct: 10 KRRKN----KKDPHAPKRSLSAYMFFAKEKRAEIISKQPELSKDVATVGKMIGEAWNKLG 65
Query: 100 DAEKAPFEAKAAKRKLDYEKLMTAY 124
+ EKAPFE KA + KL YEK Y
Sbjct: 66 EKEKAPFEKKAQEDKLRYEKEKAEY 90
>gi|321476548|gb|EFX87508.1| hypothetical protein DAPPUDRAFT_306496 [Daphnia pulex]
Length = 191
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKR SAFF F + R K++HP + + K G +W DA KA + AKA
Sbjct: 97 KDPNAPKRSLSAFFWFCHDLRGHVKEQHPEY-TLGEIAKELGRRWGVSDDATKAQYAAKA 155
Query: 111 AKRKLDYEKLMTAYNK 126
+ + YE+ M AY K
Sbjct: 156 EQDRARYERDMNAYKK 171
Score = 40.4 bits (93), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHP--NVKAVSAVGKAGGEKWKSLTDAEKAPF 106
AK D NKP+ +A+ F++ R+ +K ++P NV + + G+ WK +T+ +K F
Sbjct: 4 AKGDSNKPRGRMTAYAYFMQTCREEHKNKYPDENVVFLEFSRRCAGQ-WKLMTENDKKRF 62
Query: 107 EAKAAKRKLDYEKLMTAYNKKQ 128
+ A + KL +E M Y Q
Sbjct: 63 QGMAERDKLRFENEMRHYQPPQ 84
>gi|444515932|gb|ELV11007.1| High mobility group protein B3 [Tupaia chinensis]
Length = 212
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN P+RPPS F +F EF K +P + ++ V K E W + +D+EK P+ KAA
Sbjct: 89 DPNAPERPPSGFLLFCSEFHLKIKSTNPGI-SIGDVAKKLVEMWNNFSDSEKQPYITKAA 147
Query: 112 KRKLDYEKLMTAYNKK 127
K K Y+K + Y K
Sbjct: 148 KLKEKYKKDVANYKSK 163
Score = 38.5 bits (88), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
AK DP KPK S + F++ R+ +K+++P V + K ++WK+++ EK+ F+
Sbjct: 2 AKSDPKKPKGKVSTYAFFVQTCREEHKKKNPEVPINFTEFSKKCSKRWKTMSGKEKSKFD 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K+ Y+ M Y
Sbjct: 62 EMAKADKIRYDWEMKDY 78
>gi|441639466|ref|XP_004090212.1| PREDICTED: high mobility group protein B3-like [Nomascus
leucogenys]
Length = 131
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN P+RP S FF+F EF K +P + ++ V K GE W +L D+EK P+ K A
Sbjct: 27 DPNAPQRPLSGFFLFCSEFCPEIKSTNPGI-SIGDVAKKLGEMWNNLNDSEKQPYVTKVA 85
Query: 112 KRKLDYEKLMTAYNKK 127
K K YEK + Y K
Sbjct: 86 KLK-KYEKDVADYKSK 100
>gi|395850653|ref|XP_003797893.1| PREDICTED: uncharacterized protein LOC100942737 [Otolemur
garnettii]
Length = 633
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF F E+R K EHP + ++ V + GE W + + +K P E KA
Sbjct: 513 KDPNAPKRPPSAFFWFCSEYRPKIKGEHPGL-SIGDVAEKLGEMWSNTAEGDKQPEEKKA 571
Query: 111 AKRKLDYEKLMTA 123
AK K YEK + A
Sbjct: 572 AKLKEKYEKDIAA 584
>gi|289742511|gb|ADD20003.1| high mobility group protein D [Glossina morsitans morsitans]
Length = 110
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 46/65 (70%), Gaps = 3/65 (4%)
Query: 54 NKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKR 113
+KPKRP SA+ ++L R+ K+E+P ++ V+ + K GGE W+S+ D K+ +EAKAAK
Sbjct: 3 DKPKRPLSAYMLWLSSAREQIKRENPGIR-VTEIAKKGGEIWRSMKD--KSEWEAKAAKA 59
Query: 114 KLDYE 118
K DYE
Sbjct: 60 KEDYE 64
>gi|309265997|ref|XP_003086707.1| PREDICTED: uncharacterized protein LOC667284 [Mus musculus]
Length = 433
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F + K EHP++ ++ V K GE W + +K P+E KA
Sbjct: 89 KDPNAPKRPPSAFFLFYSVYYPKIKGEHPDL-SIGDVAKKLGEMWNNAAADDKQPYEKKA 147
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + AY K
Sbjct: 148 AKLKEKYEKDIAAYRAK 164
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFEAKA 110
DP KP+ S++ F++ RK +K++HP+ S K E+WK+++ EK FE A
Sbjct: 3 DPKKPRGKMSSYAFFMQTCRKEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMA 62
Query: 111 AKRKLDYEKLMTAY 124
K Y++ + Y
Sbjct: 63 KADKARYKRKIKTY 76
>gi|291415373|ref|XP_002723927.1| PREDICTED: high-mobility group box 2-like [Oryctolagus cuniculus]
Length = 234
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 54 NKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKR 113
N PKRPPSAFF+F E R K EHP + ++ K GE + +K P+E KAAK
Sbjct: 117 NAPKRPPSAFFLFCSEHRPKIKSEHPGL-SIGDTAKKLGEMRSEHSAKDKQPYEQKAAKL 175
Query: 114 KLDYEKLMTAYNKK 127
K YEK + AY K
Sbjct: 176 KEKYEKDIAAYRAK 189
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 44 KNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAE 102
++V K DPNKP+ S++ F++ R+ +K++HP+ + K E+WK+++ E
Sbjct: 21 RSVVMGKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKE 80
Query: 103 KAPFEAKAAKRKLDYEKLMTAY 124
K+ FE A K Y++ M Y
Sbjct: 81 KSKFEDMAKSEKARYDREMKNY 102
>gi|407263446|ref|XP_003084790.3| PREDICTED: uncharacterized protein LOC667284 [Mus musculus]
Length = 424
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPP AFF+F E+ K EHP + ++ V K GE W + +K P+E KA
Sbjct: 99 KDPNAPKRPPLAFFLFYSEYYPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKA 157
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + AY K
Sbjct: 158 AKLKEKYEKDIAAYRAK 174
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 53 PNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
P KP+ S++ F++ R+ +K++HP+ S K E+WK+++ EK FE A
Sbjct: 14 PKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAK 73
Query: 112 KRKLDYEKLMTAY 124
K YE+ M Y
Sbjct: 74 ADKAHYERKMKTY 86
>gi|353351504|emb|CBX36444.1| high-mobility-group-1 protein [Plecoglossus altivelis]
Length = 204
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F +FR K E P + V K GE W +K P+E KA
Sbjct: 89 KDPNAPKRPPSAFFIFCADFRAKVKGETPG-PTIGDVAKKLGEMWNGTCAEDKQPYEKKA 147
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + AY K
Sbjct: 148 AKLKEKYEKDIAAYRAK 164
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFEAK 109
KDP KP+ S++ F++ R+ +K++HP S K E+WK+++ EK FE
Sbjct: 3 KDPTKPRGKTSSYAYFVQTCREEHKKKHPEASVNFSEFSKKCSERWKTMSAKEKGKFEDL 62
Query: 110 AAKRKLDYEKLMTAY 124
A K+ YE+ M Y
Sbjct: 63 AKLDKVRYEREMKNY 77
>gi|157822723|ref|NP_001102933.1| high mobility group protein B4 [Rattus norvegicus]
gi|149023997|gb|EDL80494.1| rCG31445 [Rattus norvegicus]
Length = 181
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 46/74 (62%), Gaps = 3/74 (4%)
Query: 52 DPNKPKRPPSAFFVF-LEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
DP P++PPS+F +F L+ F K+ KQE+PN V V KA G+ W +TD +K P+E KA
Sbjct: 89 DPLAPRKPPSSFLLFSLDHFAKL-KQENPNWTVVQ-VAKAAGKMWSMITDVDKRPYEQKA 146
Query: 111 AKRKLDYEKLMTAY 124
A + Y + AY
Sbjct: 147 AIMRAKYFQEREAY 160
Score = 42.0 bits (97), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 55 KPKRPPSAFFVFLEEFRKVYKQEHPNVK-AVSAVGKAGGEKWKSLTDAEKAPFEAKAAKR 113
+PK S++ F+ FR +K++ PN + + EKW+S++ EKA FEA A
Sbjct: 8 RPKVNVSSYIHFMINFRNKFKEQQPNTYLTFNEFSRRCSEKWRSISKNEKAKFEAIAKLD 67
Query: 114 KLDYEKLMTAY 124
K Y++ M Y
Sbjct: 68 KARYQEEMMNY 78
>gi|444517137|gb|ELV11379.1| High mobility group protein B1 [Tupaia chinensis]
Length = 204
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 56/104 (53%), Gaps = 1/104 (0%)
Query: 21 VEDRAAGKRKAVLKASRSSNKRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPN 80
EDRA + + + ++ K K KDPN PKRPPSAFF+F E+ K EHP
Sbjct: 60 FEDRAKADKASYERDMKTDIPPKKETKKKFKDPNAPKRPPSAFFLFCSEYCPKIKGEHPG 119
Query: 81 VKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKLDYEKLMTAY 124
+ ++ V K GE W + K P+E KAAK K YEK + AY
Sbjct: 120 L-SIGDVAKRLGELWNNTAADGKQPYEKKAAKLKEKYEKDIAAY 162
Score = 41.6 bits (96), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVK-AVSAVGKAGGEKWKSLTDAEKAPFE 107
K DP K + S++ F++ F++ +K++HP+ + S K EKWK+++ EK FE
Sbjct: 2 GKGDPKKRRSIMSSYAFFVQTFQEEHKKQHPDASVSFSEFPKKCSEKWKAMSAKEKGKFE 61
Query: 108 AKAAKRKLDYEKLM 121
+A K YE+ M
Sbjct: 62 DRAKADKASYERDM 75
>gi|75218951|sp|O04235.1|SSRP1_VICFA RecName: Full=FACT complex subunit SSRP1; AltName: Full=Facilitates
chromatin transcription complex subunit SSRP1; AltName:
Full=Recombination signal sequence recognition protein 1
gi|2104679|emb|CAA66480.1| transcription factor [Vicia faba var. minor]
Length = 642
Score = 59.3 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 31/77 (40%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKR S F F + R+ K+ +P + + + VG+ GEKWK+L+ EK P+EAKA
Sbjct: 554 DPNAPKRALSGFMFFSQMERENLKKTNPGI-SFTDVGRVLGEKWKNLSAEEKEPYEAKAQ 612
Query: 112 KRKLDYEKLMTAYNKKQ 128
K Y+ ++ Y Q
Sbjct: 613 ADKKRYKDEISGYKNPQ 629
>gi|385302209|gb|EIF46351.1| nucleosome binding protein [Dekkera bruxellensis AWRI1499]
Length = 91
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
KKDPN PKR SA+ F E R + + E+P + A +GK GEKWK+L + P++AK
Sbjct: 9 KKDPNAPKRSLSAYMFFANEQRDIVRAENPGI-AFGQIGKILGEKWKALDKKGREPYDAK 67
Query: 110 AAKRKLDYE 118
AA K YE
Sbjct: 68 AAADKKRYE 76
>gi|296202119|ref|XP_002748265.1| PREDICTED: high mobility group protein B1-like isoform 1
[Callithrix jacchus]
gi|390463329|ref|XP_003733013.1| PREDICTED: high mobility group protein B1-like [Callithrix jacchus]
Length = 214
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKRPPSAFF+F E+R K EHP + ++ V K GE W + +K +E KAA
Sbjct: 91 DPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEIWNNTAADDKQHYEKKAA 149
Query: 112 KRKLDYEKLMTAYNKK 127
K K YEK + AY K
Sbjct: 150 KLKEKYEKDIAAYRAK 165
Score = 42.7 bits (99), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DP KP+ S++ F++ R+ +K++HP+ S K E+WK+++ EK FE
Sbjct: 2 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K Y+K M Y
Sbjct: 62 DMAKADKARYKKEMKTY 78
>gi|426392256|ref|XP_004062472.1| PREDICTED: putative high mobility group protein B1-like 1-like
[Gorilla gorilla gorilla]
Length = 198
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDP+ PKRPPSAFF+F E+ K EHP + ++ V K GE W +K P+E KA
Sbjct: 77 KDPSAPKRPPSAFFLFCSEYHPKIKGEHPGL-SIGDVVKKLGEMWNDTAADDKQPYEKKA 135
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + AY K
Sbjct: 136 AKLKEKYEKDIAAYQAK 152
>gi|67968790|dbj|BAE00752.1| unnamed protein product [Macaca fascicularis]
Length = 191
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DP P+RPPS+F +F ++ K+E+P+ V V KA G+ W + D EK P+E +AA
Sbjct: 91 DPQAPRRPPSSFLLFCQDHYAQLKRENPSWSVVQ-VAKATGKMWSATADLEKHPYEQRAA 149
Query: 112 KRKLDYEKLMTAYNKKQ 128
+ Y + + Y K+Q
Sbjct: 150 LLRAKYFEELELYRKQQ 166
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 55 KPKRPPSAFFVFLEEFRKVYKQEHPNVK-AVSAVGKAGGEKWKSLTDAEKAPFEAKAAKR 113
KPK S++ FL +R +K++ PN + EKW+S++ EKA +EA A
Sbjct: 10 KPKANVSSYIHFLLNYRNEFKEQQPNTYVGFKEFSRKCSEKWRSISKHEKAKYEALAKLD 69
Query: 114 KLDYEKLMTAY 124
K Y++ M Y
Sbjct: 70 KARYQEEMMNY 80
>gi|345569047|gb|EGX51916.1| hypothetical protein AOL_s00043g650 [Arthrobotrys oligospora ATCC
24927]
Length = 105
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKR SA+ F E R+ + E+P + A VGK GE+WK+LT A++ P+E KA
Sbjct: 21 DPNAPKRGLSAYMFFANEQRENVRAENPGI-AFGQVGKVLGERWKALTTAQRKPYEDKAK 79
Query: 112 KRKLDYEKLMTAY 124
K YE AY
Sbjct: 80 ADKQRYEDEKIAY 92
>gi|291414887|ref|XP_002723687.1| PREDICTED: high-mobility group box 2 [Oryctolagus cuniculus]
Length = 209
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 54 NKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKR 113
N PKRPPSAFF+F E R K EHP + ++ K GE + +K P+E KAAK
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGL-SIGDTAKKLGEMRSEHSAKDKQPYEQKAAKL 151
Query: 114 KLDYEKLMTAYNKK 127
K YEK + AY K
Sbjct: 152 KEKYEKDIAAYRAK 165
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DPNKP+ S++ F++ R+ +K++HP+ + K E+WK+++ EK+ FE
Sbjct: 2 GKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K Y++ M Y
Sbjct: 62 DMAKSDKARYDREMKNY 78
>gi|29825377|gb|AAO92280.1| putative HMG-like protein [Dermacentor variabilis]
Length = 208
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRP SAFF F + R +QE P+ +V V K G +W + D K+ +E A
Sbjct: 91 KDPNAPKRPLSAFFWFCNDERPNVRQESPDA-SVGEVAKELGRRWNEVGDDVKSKYEGLA 149
Query: 111 AKRKLDYEKLMTAY 124
AK K YEK + AY
Sbjct: 150 AKDKARYEKELKAY 163
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 54 NKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSA-VGKAGGEKWKSLTDAEKAPFEAKAAK 112
+KP+ SA+ F++ R+ +K++HPN V A K E+WK+++++EK F A K
Sbjct: 5 DKPRGRMSAYAFFVQTCREEHKKKHPNENVVFAEFSKKCAERWKTMSESEKKRFHQMADK 64
Query: 113 RKLDYEKLMTAY 124
K ++ M Y
Sbjct: 65 DKKRFDTEMADY 76
>gi|443897570|dbj|GAC74910.1| HMG box-containing protein [Pseudozyma antarctica T-34]
Length = 280
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 45/75 (60%), Gaps = 4/75 (5%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
+DP KPKRP SAFF FL + R + PN+ S K GGE+WK +T +KAP+E +A
Sbjct: 203 RDPAKPKRPNSAFFEFLNDLR-ASESVIPNITEFS---KRGGERWKQMTPDQKAPYEQRA 258
Query: 111 AKRKLDYEKLMTAYN 125
+ Y++ + YN
Sbjct: 259 LQALEQYKRDLEVYN 273
>gi|407850184|gb|EKG04681.1| high mobility group protein, putative [Trypanosoma cruzi]
Length = 270
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 45/73 (61%), Gaps = 5/73 (6%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KD N PKR SA+F F+ +FRK +HP++ +V+ KA G WK L+D K P+EA A
Sbjct: 200 KDENAPKRSMSAYFFFVGDFRK----KHPDL-SVTETSKAAGAAWKELSDEMKKPYEAMA 254
Query: 111 AKRKLDYEKLMTA 123
K K Y++ M A
Sbjct: 255 QKDKERYQREMAA 267
>gi|20138433|sp|Q9UGV6.1|HMGLX_HUMAN RecName: Full=Putative high mobility group protein 1-like 10;
Short=HMG-1L10
Length = 211
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKR PSAFF+F +R K EHP + ++ V K GE W + +K P+E KA
Sbjct: 90 KDPNAPKRTPSAFFLFCSAYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKA 148
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + AY K
Sbjct: 149 AKLKEKYEKDIAAYRAK 165
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
+K DP K + S+ F + R+ +K++HP+ +S K E+WK+++ EK FE
Sbjct: 2 SKGDPKKLRGKMSSHAFFGQTCREAHKKKHPDASVNLSEFSKKCSERWKTMSAKEKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K YE+ M Y
Sbjct: 62 DMAKADKAHYEREMKTY 78
>gi|407404609|gb|EKF29994.1| high mobility group protein, putative [Trypanosoma cruzi
marinkellei]
Length = 361
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 44/73 (60%), Gaps = 5/73 (6%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KD N PKR SA+F F +FRK +HP++ +V+ KA G WK L+D K P+EA A
Sbjct: 291 KDENAPKRSMSAYFFFASDFRK----KHPDL-SVTETSKAAGAAWKELSDEMKKPYEAMA 345
Query: 111 AKRKLDYEKLMTA 123
K K Y++ M A
Sbjct: 346 QKDKERYQREMAA 358
>gi|403222987|dbj|BAM41118.1| high-mobility-group protein [Theileria orientalis strain Shintoku]
Length = 93
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
Query: 40 NKRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNV-KAVSAVGKAGGEKWKSL 98
+K K K KKDPN PKR S++ F +E R +E+P++ K V+ VGK G W SL
Sbjct: 6 SKSAKKGKRTKKDPNAPKRALSSYMFFAKEKRNELIKENPDLAKDVATVGKLVGAAWNSL 65
Query: 99 TDAEKAPFEAKAAKRKLDYEKLMTAYNK 126
D+EKAP+E A + YE+ Y K
Sbjct: 66 DDSEKAPYEKLAEADRERYEREKLEYQK 93
>gi|402853838|ref|XP_003891595.1| PREDICTED: high mobility group protein B4 [Papio anubis]
Length = 191
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DP P+RPPS+F +F ++ K+E+P+ V V KA G+ W + TD EK P+E +AA
Sbjct: 91 DPQAPRRPPSSFLLFCQDHYAQLKRENPSWSVVQ-VAKATGKMWSATTDLEKHPYEQRAA 149
Query: 112 KRKLDYEKLMTAYNKK 127
+ Y + + Y K+
Sbjct: 150 LLRAKYFEELERYRKQ 165
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 55 KPKRPPSAFFVFLEEFRKVYKQEHPNVK-AVSAVGKAGGEKWKSLTDAEKAPFEAKAAKR 113
KPK S++ FL +R +K++ PN + EKW+S++ EKA +EA A
Sbjct: 10 KPKANVSSYIHFLLNYRNKFKEQQPNTYVGFKEFSRKCSEKWRSISKHEKAKYEALAKLD 69
Query: 114 KLDYEKLMTAY 124
K Y++ M Y
Sbjct: 70 KARYQEEMMNY 80
>gi|297813579|ref|XP_002874673.1| hypothetical protein ARALYDRAFT_489947 [Arabidopsis lyrata subsp.
lyrata]
gi|297320510|gb|EFH50932.1| hypothetical protein ARALYDRAFT_489947 [Arabidopsis lyrata subsp.
lyrata]
Length = 448
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 54/95 (56%), Gaps = 3/95 (3%)
Query: 32 VLKASRSSNKRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAG 91
++K ++ K K K+ K DPNKPK+P S++F+F +E RK +EHP + S V
Sbjct: 352 IIKKTKEMTKNKK--KNEKVDPNKPKKPASSYFLFCKEARKSVLEEHPGINN-STVTAHI 408
Query: 92 GEKWKSLTDAEKAPFEAKAAKRKLDYEKLMTAYNK 126
KWK L + EK + KAA+ Y+K + YNK
Sbjct: 409 SLKWKELGEEEKQVYNGKAAELMEAYKKEVEEYNK 443
Score = 55.1 bits (131), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DP KPK P SA+ ++ E R K E+ K+V V K GE+WK+L++ +KAP++ A
Sbjct: 244 DPLKPKHPISAYLIYANERRAALKGEN---KSVIEVAKMTGEEWKNLSEEQKAPYDQMAK 300
Query: 112 KRKLDYEKLMTAY 124
K+K Y + M Y
Sbjct: 301 KKKEIYLQEMEGY 313
>gi|444722397|gb|ELW63094.1| High mobility group protein B1 [Tupaia chinensis]
Length = 178
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F E+R K E P + ++ V K GE W + +K P+E KA
Sbjct: 90 KDPNAPKRPPSAFFLFCSEYRPKIKGEPPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKA 148
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K Y+K + AY K
Sbjct: 149 AKLKEKYDKDIAAYRAK 165
Score = 38.5 bits (88), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPN--VKAVSAVGKAGGEKWKSLTDAEKAPF 106
K DP KP+ S++ F++ ++ +K+ HP+ V S K E+WK+++ EK F
Sbjct: 2 GKGDPKKPRGKMSSYAFFVQTCQEEHKK-HPDASVNNFSEFSKKCSERWKTMSAKEKGKF 60
Query: 107 EAKAAKRKLDYEKLMTAY 124
E A K YE+ M Y
Sbjct: 61 EDMAKADKAPYEREMKTY 78
>gi|425767422|gb|EKV05996.1| Non-histone chromosomal protein 6 [Penicillium digitatum PHI26]
gi|425779648|gb|EKV17689.1| Non-histone chromosomal protein 6 [Penicillium digitatum Pd1]
Length = 189
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 58/110 (52%), Gaps = 11/110 (10%)
Query: 15 NEVVKPVEDRAAGKRKAVLKASRSSNKRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVY 74
N + P E RKA K V+ KKDPN PKR SA+ F + R
Sbjct: 78 NPFIMPKESTTKSTRKAP----------EKRVQRRKKDPNAPKRGLSAYMFFANDNRDKV 127
Query: 75 KQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKLDYEKLMTAY 124
++E+P + + VGK G+KWK+L++ ++ P++AKAA K YE+ AY
Sbjct: 128 REENPGI-SFGQVGKQLGDKWKALSETDRKPYDAKAAADKKRYEEEKAAY 176
>gi|431918516|gb|ELK17735.1| 182 kDa tankyrase-1-binding protein [Pteropus alecto]
Length = 2600
Score = 58.9 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 2/92 (2%)
Query: 33 LKASRSSNKRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGG 92
+ R S K+ VK K DPN PKRP SA+ ++L R+ K +HP + +++ + K G
Sbjct: 525 MAKDRKSRKKPTEVKKGK-DPNAPKRPMSAYMLWLNASREKIKLDHPGI-SITDLSKKAG 582
Query: 93 EKWKSLTDAEKAPFEAKAAKRKLDYEKLMTAY 124
E WK ++ +K ++ KA + +YEK M Y
Sbjct: 583 EIWKGMSKEKKEEWDRKAEDARREYEKAMKEY 614
>gi|297706944|ref|XP_002830283.1| PREDICTED: putative high mobility group protein B3-like
protein-like [Pongo abelii]
Length = 125
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Query: 47 KSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPF 106
K K PN PKRP S FF+F EF K +P + ++ V K GE W +L D+EK P+
Sbjct: 20 KGGKNHPNAPKRPLSGFFLFCSEFCPKIKSTNPGI-SIGDVVKKLGEMWNNLNDSEKQPY 78
Query: 107 EAKAAKRKLDYEKLMTAYNKK 127
K AK K YEK + Y K
Sbjct: 79 VTKVAKLK-KYEKDVADYKSK 98
>gi|444707322|gb|ELW48604.1| High mobility group protein B4 [Tupaia chinensis]
Length = 189
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DP P+RPPS+F +F ++ K+E+P+ V V KA G+ W +T EK P+E +AA
Sbjct: 91 DPQAPRRPPSSFILFCQDHYAQLKRENPSWTVVQ-VAKASGKMWTVMTAVEKQPYEQRAA 149
Query: 112 KRKLDYEKLMTAYNKK 127
+ Y++ + Y K+
Sbjct: 150 LLRARYQEELEVYRKQ 165
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 55 KPKRPPSAFFVFLEEFRKVYKQEHPNVK-AVSAVGKAGGEKWKSLTDAEKAPFEAKAAKR 113
+PK S++ FL +R +K++ PN + EKWKS++ EKA +EA A
Sbjct: 10 RPKVNVSSYIHFLLNYRNKFKEQQPNTYLGFKEFSRKCSEKWKSISKHEKAKYEALAKLD 69
Query: 114 KLDYEKLMTAY 124
K Y++ M Y
Sbjct: 70 KARYQEEMMNY 80
>gi|296199401|ref|XP_002747150.1| PREDICTED: high mobility group protein B1-like [Callithrix jacchus]
Length = 209
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 44/77 (57%), Gaps = 2/77 (2%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKR PSAFF+F E K EHP + +V V K GE W + +K P+E KA
Sbjct: 96 KDPNAPKRFPSAFFLFCSECYPKIKGEHPGL-SVGDVKKL-GEMWSNTAAGDKQPYEKKA 153
Query: 111 AKRKLDYEKLMTAYNKK 127
AK + Y + + AY K
Sbjct: 154 AKLRKKYGRELAAYGAK 170
>gi|331220978|ref|XP_003323164.1| high mobility group protein B1 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309302154|gb|EFP78745.1| high mobility group protein B1 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 106
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 53/85 (62%), Gaps = 2/85 (2%)
Query: 42 RTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDA 101
+TK VK +KDPN PKRP SA+ F +++R+ K E+P+V + +G+ G KWK L++
Sbjct: 23 KTKRVKK-EKDPNAPKRPLSAYMYFSQDWRERIKTENPDV-SFGEIGRLLGLKWKGLSEE 80
Query: 102 EKAPFEAKAAKRKLDYEKLMTAYNK 126
EK P+E A++ K +E Y +
Sbjct: 81 EKKPYEDMASRDKKRHEAEKAEYER 105
>gi|444730059|gb|ELW70455.1| High mobility group protein B1 [Tupaia chinensis]
gi|444730060|gb|ELW70456.1| High mobility group protein B1 [Tupaia chinensis]
Length = 177
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPP AFF F E+ K EHP + ++ V K GE W + +K P+E KA
Sbjct: 57 KDPNAPKRPPLAFFFFCSEYCPKIKGEHPGL-SIGDVAKKLGEMWNNTAAGDKQPYEKKA 115
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YE+ + AY K
Sbjct: 116 AKLKEKYERDIAAYRAK 132
>gi|403217833|emb|CCK72326.1| hypothetical protein KNAG_0J02470 [Kazachstania naganishii CBS
8797]
Length = 92
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
KKDPN PKR SA+ F E R + + E+P+V +G+ GE+WK+L + P+EAK
Sbjct: 14 KKDPNAPKRALSAYMFFANENRDIVRSENPDV-TFGQIGRLLGERWKALDGEGREPYEAK 72
Query: 110 AAKRKLDYE 118
AA K YE
Sbjct: 73 AAADKKRYE 81
>gi|348556930|ref|XP_003464273.1| PREDICTED: FACT complex subunit SSRP1-like [Cavia porcellus]
Length = 709
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 62/105 (59%), Gaps = 4/105 (3%)
Query: 23 DRAAGKRKAVLKASRSSNK--RTKNVKSAK-KDPNKPKRPPSAFFVFLEEFRKVYKQEHP 79
DR KRK + +A + ++ R K V++ K KDPN PKRP SA+ ++L R+ K +HP
Sbjct: 511 DREEKKRKQLKRAKMTKDRKSRKKTVEAKKGKDPNAPKRPMSAYMLWLNASREKIKSDHP 570
Query: 80 NVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKLDYEKLMTAY 124
+ +++ + K GE WK ++ +K ++ KA + +YEK M Y
Sbjct: 571 GI-SITDLSKKAGEIWKGMSKEKKEEWDRKAEDARREYEKAMKEY 614
>gi|426215132|ref|XP_004001831.1| PREDICTED: high mobility group protein B4 [Ovis aries]
Length = 196
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DP+ P+RPPS+F +F ++ K E+P+ V V KA G+ W + TD +K P+E +AA
Sbjct: 91 DPHAPRRPPSSFLLFCQDHYAQLKSENPSWSVVQ-VAKASGKMWSAKTDVDKQPYEQRAA 149
Query: 112 KRKLDYEKLMTAY 124
+ Y + ++ Y
Sbjct: 150 LLRAKYREELSVY 162
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Query: 46 VKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVK-AVSAVGKAGGEKWKSLTDAEKA 104
+ K+D KPK S++ FL +R +K++ PN + EKW+S++ EKA
Sbjct: 1 MNMGKRDHLKPKANVSSYIHFLLNYRNKFKEQQPNTYLGFKEFSRKCSEKWRSISKHEKA 60
Query: 105 PFEAKAAKRKLDYEKLMTAY 124
+EA A K Y++ M Y
Sbjct: 61 KYEALAKLDKARYQEEMMNY 80
>gi|148684659|gb|EDL16606.1| mCG50402 [Mus musculus]
Length = 214
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Query: 46 VKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAP 105
+K KDPN PKRPPSAFF+F + K EHP++ ++ V K GE W + +K P
Sbjct: 84 IKKKFKDPNAPKRPPSAFFLFYSVYYPKIKGEHPDL-SIGDVAKKLGEMWNNAAADDKQP 142
Query: 106 FEAKAAKRKLDYEKLMTAYNKK 127
+E KAAK K YEK + AY K
Sbjct: 143 YEKKAAKLKEKYEKDIAAYRAK 164
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFEAKA 110
DP KP+ S++ F++ RK +K++HP+ S K E+WK+++ EK FE A
Sbjct: 3 DPKKPRGKMSSYAFFMQTCRKEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMA 62
Query: 111 AKRKLDYEKLMTAY 124
K Y++ + Y
Sbjct: 63 KADKARYKRKIKTY 76
>gi|294463267|gb|ADE77169.1| unknown [Picea sitchensis]
Length = 482
Score = 58.5 bits (140), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
+KDP+KPK P +AFF F E R +E+ N V + K GE+WK++T E+AP+E
Sbjct: 247 EKDPSKPKHPVTAFFAFTNERRAALLEENHN---VLQIAKILGEEWKNMTKEERAPYEQI 303
Query: 110 AAKRKLDYEKLMTAYNKK 127
AA+ K Y M Y +K
Sbjct: 304 AAEAKEKYMGEMELYKQK 321
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN+PK+PP++F +F +E RK QE P V + + KWK L AEK + +AA
Sbjct: 377 DPNRPKKPPTSFLLFSKETRKKLVQERPGVNNTT-INALISLKWKDLGTAEKQKWVDEAA 435
Query: 112 KRKLDYEKLMTAYNK 126
+ Y+K + YNK
Sbjct: 436 GAMVQYKKEVEEYNK 450
>gi|290986470|ref|XP_002675947.1| predicted protein [Naegleria gruberi]
gi|284089546|gb|EFC43203.1| predicted protein [Naegleria gruberi]
Length = 215
Score = 58.5 bits (140), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
D N PKRP S++ +F + +RK E+P +K V+ V K GEKW + DAEKAP+ KAA
Sbjct: 116 DENAPKRPLSSYMLFSQTYRKSLVAENPTLK-VTEVAKLVGEKWGKMNDAEKAPYVNKAA 174
Query: 112 KRKLDYEKLMTAYNKKQ 128
+ K Y + Y+ Q
Sbjct: 175 ELKAAYNIEKSKYDATQ 191
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Query: 48 SAKKDPNKPKRPPSAFFVFLEEFRKVYKQE--HPNVKAVSAVGKAGGEKWKSLTDAEKAP 105
S KKDPN PKRP + FF+F +E R+ K K+ S V K GE+W LTD+EK
Sbjct: 7 SKKKDPNAPKRPKTGFFLFCDERREKVKATLGEGEKKSASEVSKLLGEEWGKLTDSEKDK 66
Query: 106 FEAKAAKRKLDYEKLMTAYNK 126
+ + + K Y+K Y K
Sbjct: 67 YNSVSKKNMEVYKKQFEEYKK 87
>gi|115396468|ref|XP_001213873.1| nonhistone chromosomal protein 6A [Aspergillus terreus NIH2624]
gi|114193442|gb|EAU35142.1| nonhistone chromosomal protein 6A [Aspergillus terreus NIH2624]
Length = 101
Score = 58.5 bits (140), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKR SA+ F E R ++E+P + VGK GEKWK+L++ ++ P+E KAA
Sbjct: 19 DPNAPKRGLSAYMFFANENRDKVREENPGI-TFGQVGKMLGEKWKALSEDDRRPYEEKAA 77
Query: 112 KRKLDYEKLMTAYN 125
K YE +YN
Sbjct: 78 ADKKRYEDEKASYN 91
>gi|334186863|ref|NP_001190816.1| HMG (high mobility group) box protein [Arabidopsis thaliana]
gi|332659408|gb|AEE84808.1| HMG (high mobility group) box protein [Arabidopsis thaliana]
Length = 450
Score = 58.5 bits (140), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DP KPK P SAF V+ E R ++E+ K+V V K GE+WK+L+D +KAP+E A
Sbjct: 251 DPLKPKHPVSAFLVYANERRAALREEN---KSVVEVAKITGEEWKNLSDKKKAPYEKVAK 307
Query: 112 KRKLDYEKLMTAY 124
K K Y + M Y
Sbjct: 308 KNKETYLQAMEEY 320
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
Query: 32 VLKASRSSNKRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAG 91
+LK ++ K K+ DPNKPK+P S++F+F ++ RK +E P +
Sbjct: 349 MLKKKEKTDNLIKKKKNENVDPNKPKKPASSYFLFSKDERKKLTEERPGTNNATVTALIS 408
Query: 92 GEKWKSLTDAEKAPFEAKAAKRKLDYEKLMTAYNKK 127
KWK L++ EK + KAAK Y+K + AYNKK
Sbjct: 409 L-KWKELSEEEKQVYNGKAAKLMEAYKKEVEAYNKK 443
>gi|195381989|ref|XP_002049715.1| GJ21748 [Drosophila virilis]
gi|194144512|gb|EDW60908.1| GJ21748 [Drosophila virilis]
Length = 112
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 47/66 (71%), Gaps = 3/66 (4%)
Query: 54 NKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKR 113
+KPKRP SA+ ++L R+ K+E+P +K V+ V K GGE W+++ D K+ +EAKAAK
Sbjct: 3 DKPKRPLSAYMLWLNSARESIKRENPGIK-VTEVAKRGGELWRAMKD--KSEWEAKAAKA 59
Query: 114 KLDYEK 119
K DY++
Sbjct: 60 KDDYDR 65
>gi|15236607|ref|NP_194111.1| HMG (high mobility group) box protein [Arabidopsis thaliana]
gi|75266376|sp|Q9SUP7.1|HMGB6_ARATH RecName: Full=High mobility group B protein 6; AltName:
Full=Nucleosome/chromatin assembly factor group D 06;
Short=Nucleosome/chromatin assembly factor group D 6;
AltName: Full=WRKY transcription factor 53;
Short=AtWRKY53; Short=WRKY DNA-binding protein 53
gi|4454049|emb|CAA23046.1| 98b like protein [Arabidopsis thaliana]
gi|7269229|emb|CAB81298.1| 98b like protein [Arabidopsis thaliana]
gi|18377799|gb|AAL67049.1| putative 98b protein [Arabidopsis thaliana]
gi|20465867|gb|AAM20038.1| putative 98b protein [Arabidopsis thaliana]
gi|22022506|gb|AAM83212.1| putative 98b protein [Arabidopsis thaliana]
gi|332659407|gb|AEE84807.1| HMG (high mobility group) box protein [Arabidopsis thaliana]
Length = 456
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DP KPK P SAF V+ E R ++E+ K+V V K GE+WK+L+D +KAP+E A
Sbjct: 251 DPLKPKHPVSAFLVYANERRAALREEN---KSVVEVAKITGEEWKNLSDKKKAPYEKVAK 307
Query: 112 KRKLDYEKLMTAY 124
K K Y + M Y
Sbjct: 308 KNKETYLQAMEEY 320
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPNKPK+P S++F+F ++ RK +E P + KWK L++ EK + KAA
Sbjct: 375 DPNKPKKPASSYFLFSKDERKKLTEERPGTNNATVTALISL-KWKELSEEEKQVYNGKAA 433
Query: 112 KRKLDYEKLMTAYNKK 127
K Y+K + AYNKK
Sbjct: 434 KLMEAYKKEVEAYNKK 449
>gi|94966915|ref|NP_001035652.1| high mobility group protein B4 [Bos taurus]
gi|119370723|sp|Q32L34.1|HMGB4_BOVIN RecName: Full=High mobility group protein B4
gi|81673105|gb|AAI09791.1| High-mobility group box 4 [Bos taurus]
gi|296488916|tpg|DAA31029.1| TPA: high mobility group protein B4 [Bos taurus]
Length = 194
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DP+ P+RPPS+F +F ++ K E+P+ V V KA G+ W + TD +K P+E +AA
Sbjct: 89 DPHAPRRPPSSFLLFCQDHYAQLKSENPSWSVVQ-VAKASGKMWSAKTDVDKQPYEQRAA 147
Query: 112 KRKLDYEKLMTAY 124
+ Y + ++ Y
Sbjct: 148 LLRAKYREELSVY 160
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVK-AVSAVGKAGGEKWKSLTDAEKAPFE 107
K+D KPK S++ FL +R +K++ PN + EKW+S++ EKA +E
Sbjct: 2 GKRDQLKPKANVSSYIHFLLNYRNKFKEQQPNTYLGFKEFSRKCSEKWRSISKHEKAKYE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A A K Y++ M Y
Sbjct: 62 ALAKLDKARYQEEMMNY 78
>gi|347441690|emb|CCD34611.1| similar to transcription factor HMG [Botryotinia fuckeliana]
Length = 101
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKR SA+ F E R ++E+P + + VGK GE+WK+L + ++ P+E AA
Sbjct: 20 DPNAPKRGLSAYMFFANEQRDNVREENPGI-SFGQVGKVLGERWKALNEKQRGPYEESAA 78
Query: 112 KRKLDYEKLMTAYN 125
K K YE+ YN
Sbjct: 79 KDKKRYEEEKANYN 92
>gi|366996751|ref|XP_003678138.1| hypothetical protein NCAS_0I01260 [Naumovozyma castellii CBS 4309]
gi|342304009|emb|CCC71794.1| hypothetical protein NCAS_0I01260 [Naumovozyma castellii CBS 4309]
Length = 94
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
KKDPN PKR S++ F R + + E+P+V VGK GE+WK+LT EK PFE K
Sbjct: 16 KKDPNAPKRALSSYMFFANATRDIVRSENPDV-TFGQVGKLLGERWKALTPEEKEPFELK 74
Query: 110 AAKRKLDY 117
A + K Y
Sbjct: 75 AKQDKERY 82
>gi|398406589|ref|XP_003854760.1| HMGB family protein [Zymoseptoria tritici IPO323]
gi|339474644|gb|EGP89736.1| HMGB family protein [Zymoseptoria tritici IPO323]
Length = 111
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 53 PNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAK 112
PN PKR SA+ F E R ++E+P +K VGK GE+WK L + +K P+EAKAA
Sbjct: 26 PNMPKRGLSAYMFFANEQRDNVREENPGIK-FGEVGKLLGERWKGLNEKQKTPYEAKAAA 84
Query: 113 RKLDYEKLMTAYNKKQ 128
K YE+ AY +Q
Sbjct: 85 DKKRYEEEKKAYLNEQ 100
>gi|62647362|ref|XP_575506.1| PREDICTED: high mobility group protein B1-like [Rattus norvegicus]
gi|293346835|ref|XP_001060814.2| PREDICTED: high mobility group protein B1-like isoform 1 [Rattus
norvegicus]
Length = 214
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN KRPPSAFF+F E+R K EHP + ++ V K GE W + +K P E KA
Sbjct: 90 KDPNALKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWTNTAVDDKQPCEKKA 148
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + AY K
Sbjct: 149 AKLKEKYEKDIAAYRAK 165
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 53 PNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
P KP+ S+ F++ R+ +K++H N S K E+WK+++ EK FE A
Sbjct: 6 PKKPRGKMSSHAFFVQTCREEHKKKHLNASVNFSEFSKKCSERWKTMSAKEKGKFEDMAK 65
Query: 112 KRKLDYEKLMTAY 124
K YE+ M Y
Sbjct: 66 ADKARYEREMKTY 78
>gi|378727181|gb|EHY53640.1| non-histone chromosomal protein 6 [Exophiala dermatitidis
NIH/UT8656]
Length = 102
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 53/91 (58%), Gaps = 2/91 (2%)
Query: 34 KASRSSNKRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGE 93
KAS+SS + + K KKDPN PKR SA+ F E R+ ++E+P + + VGK G+
Sbjct: 3 KASKSSKTKGRGEKK-KKDPNAPKRGLSAYMFFANEQRESVREENPGI-SFGQVGKVLGD 60
Query: 94 KWKSLTDAEKAPFEAKAAKRKLDYEKLMTAY 124
+WK+L + ++ P+E KA K YE Y
Sbjct: 61 RWKALNEKQREPYEKKAQADKKRYEDEKAKY 91
>gi|328769557|gb|EGF79601.1| hypothetical protein BATDEDRAFT_89692 [Batrachochytrium
dendrobatidis JAM81]
Length = 99
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Query: 41 KRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTD 100
KR + K ++KDP+ PKRP SAF +F +E R ++E+P+ + +GK G W+ L D
Sbjct: 14 KRGDDKKKSRKDPDAPKRPLSAFMIFSKENRPRIREENPDA-SFGDLGKLLGAAWRELND 72
Query: 101 AEKAPFEAKAAKRKLDYEKLMTAY 124
+K + KA + K YE+ M+ Y
Sbjct: 73 KDKQVYTDKADEDKGRYEREMSTY 96
>gi|389611269|dbj|BAM19246.1| high mobility group protein D [Papilio polytes]
Length = 120
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 48/72 (66%), Gaps = 3/72 (4%)
Query: 54 NKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKR 113
+KPKRP SA+ ++L R+ K ++P +K V+ + K GGE W+S+ D K+ +EAKAAK
Sbjct: 3 DKPKRPMSAYMLWLNSAREQIKADNPGLK-VTEIAKKGGEIWRSMED--KSVWEAKAAKA 59
Query: 114 KLDYEKLMTAYN 125
K Y K + +YN
Sbjct: 60 KEQYTKDLESYN 71
>gi|348680492|gb|EGZ20308.1| hypothetical protein PHYSODRAFT_285400 [Phytophthora sojae]
Length = 211
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
KKDPN PKR SA+F F + R+ + E+PN K ++ + E+W++L D ++A ++
Sbjct: 107 KKDPNAPKRALSAYFFFCNDIRQEVRDENPN-KKITEIATLLAERWRALPDKKRAKYQKM 165
Query: 110 AAKRKLDYEKLMTAYN 125
+ K+ Y++ M AYN
Sbjct: 166 HEEAKVKYQQQMDAYN 181
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
KKD N PKR SAF F + R+ K+E P + A + G +WK ++D E+ P++
Sbjct: 19 KKDKNAPKRALSAFMFFSNDIRETVKKEMPEL-AFLQISSEIGRRWKKISDEERRPYDEL 77
Query: 110 AAKRKLDYEK 119
AA K Y++
Sbjct: 78 AAADKRRYQE 87
>gi|58268918|ref|XP_571615.1| nonhistone protein 6 [Cryptococcus neoformans var. neoformans
JEC21]
gi|134112618|ref|XP_774852.1| hypothetical protein CNBF0170 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|338818300|sp|P0CO25.1|NHP6_CRYNB RecName: Full=Non-histone chromosomal protein 6
gi|338818301|sp|P0CO24.1|NHP6_CRYNJ RecName: Full=Non-histone chromosomal protein 6
gi|50257500|gb|EAL20205.1| hypothetical protein CNBF0170 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57227850|gb|AAW44308.1| nonhistone protein 6, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 116
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 47 KSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPF 106
K KKDPNKPKR SA+ F++++R+ K E+P VGK G KW+ + + EK P+
Sbjct: 19 KRTKKDPNKPKRALSAYMFFVQDYRERIKTENPEA-TFGDVGKLLGIKWREMNENEKKPY 77
Query: 107 EAKA 110
EAKA
Sbjct: 78 EAKA 81
>gi|405963576|gb|EKC29138.1| FACT complex subunit SSRP1 [Crassostrea gigas]
Length = 757
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKRP SA+F++ R+ K++ P++ +++ + K GE WK + D +K + KAA
Sbjct: 556 DPNAPKRPQSAYFLWFNANREELKKDTPDI-SITDLSKKAGEVWKQMEDTDKTEWNEKAA 614
Query: 112 KRKLDYEKLMTAYNKK 127
+ K +YEK M Y K
Sbjct: 615 EAKKEYEKAMEEYKAK 630
>gi|729729|sp|P40622.1|HMG1A_CHITE RecName: Full=Mobility group protein 1A
gi|156587|gb|AAA21712.1| high mobility group protein 1a [Chironomus tentans]
Length = 114
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 48/72 (66%), Gaps = 3/72 (4%)
Query: 55 KPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRK 114
KPKRP SA+ ++L R+ K+E+P+ K V+ + K GGE W+ + D K+ +EAKAAK K
Sbjct: 4 KPKRPLSAYMLWLNSARESIKKENPDFK-VTEIAKKGGELWRGMKD--KSEWEAKAAKMK 60
Query: 115 LDYEKLMTAYNK 126
+YEK M + +
Sbjct: 61 EEYEKAMKEFER 72
>gi|320168039|gb|EFW44938.1| hypothetical protein CAOG_02944 [Capsaspora owczarzaki ATCC 30864]
Length = 193
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSA+ F R ++ +P+ + A+ GE W+ LTD K P+ +A
Sbjct: 97 KDPNAPKRPPSAYICFANAVRPELRKTYPS-DTMPAISTKIGELWRQLTDDNKEPYNKQA 155
Query: 111 AKRKLDYEKLMTAY 124
KL ++ M AY
Sbjct: 156 EALKLKFQTEMAAY 169
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
+KDPNKPK+P +AF F R+ K ++P +K ++ + G+ W L +A+K ++
Sbjct: 9 EKDPNKPKKPTTAFMYFSNAMRERVKTQNPGLK-MTDIASVLGKLWGQLPEADKDKYQTM 67
Query: 110 AAKRKLDYEKLMTAY 124
A K Y K M Y
Sbjct: 68 ANSDKERYAKAMDGY 82
>gi|196119855|gb|ACG69451.1| high-mobility group box 1 (predicted) [Otolemur garnettii]
Length = 155
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKR PSAFF+F E+R K EHP + ++ V K GE W + +K P E KA
Sbjct: 39 KDPNAPKRLPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPEEKKA 97
Query: 111 AK 112
AK
Sbjct: 98 AK 99
>gi|339242839|ref|XP_003377345.1| high mobility group protein 1.2 [Trichinella spiralis]
gi|316973861|gb|EFV57410.1| high mobility group protein 1.2 [Trichinella spiralis]
Length = 229
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 47 KSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPF 106
K +KKDPN PKR SAFF F R +Q HP+ K V V + G WK++ + EK F
Sbjct: 115 KRSKKDPNAPKRALSAFFFFSNSKRAEIQQAHPDWK-VGQVAQELGRMWKAIDEDEKRKF 173
Query: 107 EAKAAKRKLDYEKLMTAY 124
E AAK + YE+ M Y
Sbjct: 174 EDMAAKDRTRYEEDMKNY 191
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 37/70 (52%), Gaps = 5/70 (7%)
Query: 57 KRPPSAFFV--FLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRK 114
K P FFV EE +K Y E NV+ V+ V K KWK++T EK F AAK +
Sbjct: 40 KTTPYGFFVKMCYEEHKKKYPNE--NVQ-VTEVSKKCSAKWKTMTQEEKHRFYELAAKDR 96
Query: 115 LDYEKLMTAY 124
+ Y+ + AY
Sbjct: 97 VRYDAELEAY 106
>gi|195627962|gb|ACG35811.1| HMG1/2-like protein [Zea mays]
Length = 123
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 34/50 (68%)
Query: 57 KRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPF 106
KR + FF FL EFR Y ++HP +K V V KA GEKW+S++D EKA +
Sbjct: 20 KRGLTPFFAFLAEFRPQYLEKHPELKGVKEVSKAAGEKWRSMSDEEKAKY 69
>gi|162460188|ref|NP_001105108.1| nucleosome/chromatin assembly factor D [Zea mays]
gi|4995921|emb|CAB44297.1| HMG1 protein [Zea mays]
Length = 123
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 34/50 (68%)
Query: 57 KRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPF 106
KR + FF FL EFR Y ++HP +K V V KA GEKW+S++D EKA +
Sbjct: 20 KRGLTPFFAFLAEFRPQYLEKHPELKGVKEVSKAAGEKWRSMSDEEKAKY 69
>gi|224072172|ref|XP_002303636.1| high mobility group family [Populus trichocarpa]
gi|222841068|gb|EEE78615.1| high mobility group family [Populus trichocarpa]
Length = 480
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDP KPK+P SAFF+F E R E+ K+V V K GE+WK++T+ + P+E A
Sbjct: 268 KDPLKPKQPLSAFFLFCNERRAALLAEN---KSVLEVAKIAGEEWKNMTEKRRGPYEEVA 324
Query: 111 AKRKLDYEKLMTAY 124
K + Y + M AY
Sbjct: 325 KKNREKYMQEMEAY 338
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPNKPK+P S+F +F +E RK E P + S + KWK L + E+ + +KAA
Sbjct: 394 DPNKPKKPASSFLLFSKETRKSLMDERPGINN-STLTAMISVKWKELNEEERQIWNSKAA 452
Query: 112 KRKLDYEKLMTAYNK 126
+ Y+K + Y+K
Sbjct: 453 EAMEAYKKELEEYSK 467
>gi|194882008|ref|XP_001975105.1| GG22136 [Drosophila erecta]
gi|190658292|gb|EDV55505.1| GG22136 [Drosophila erecta]
Length = 111
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 47/66 (71%), Gaps = 3/66 (4%)
Query: 54 NKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKR 113
+KPKRP SA+ ++L R+ K+E+P +K V+ V K GGE W+++ D K+ +EAKAAK
Sbjct: 3 DKPKRPLSAYMLWLNSARESIKRENPGIK-VTEVAKRGGELWRAMKD--KSEWEAKAAKA 59
Query: 114 KLDYEK 119
K DY++
Sbjct: 60 KDDYDR 65
>gi|119610319|gb|EAW89913.1| hCG1647425 [Homo sapiens]
Length = 254
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 48/78 (61%), Gaps = 4/78 (5%)
Query: 51 KDPNKPKRPPSAFFVFL-EEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
+DPN PK PP AFF+F E+ K+ +EHP + ++S V K GE W + + +K P+E K
Sbjct: 117 EDPNAPKSPPLAFFMFSSEDCPKI--KEHPGL-SISDVAKKLGEMWNYIAEDDKHPYEKK 173
Query: 110 AAKRKLDYEKLMTAYNKK 127
A K K YEK + A+ K
Sbjct: 174 AVKLKEKYEKDIAAFGGK 191
>gi|195486377|ref|XP_002091483.1| HmgD [Drosophila yakuba]
gi|38047835|gb|AAR09820.1| similar to Drosophila melanogaster HmgD, partial [Drosophila
yakuba]
gi|194177584|gb|EDW91195.1| HmgD [Drosophila yakuba]
Length = 111
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 47/66 (71%), Gaps = 3/66 (4%)
Query: 54 NKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKR 113
+KPKRP SA+ ++L R+ K+E+P +K V+ V K GGE W+++ D K+ +EAKAAK
Sbjct: 3 DKPKRPLSAYMLWLNSARESIKRENPGIK-VTEVAKRGGELWRAMKD--KSEWEAKAAKA 59
Query: 114 KLDYEK 119
K DY++
Sbjct: 60 KDDYDR 65
>gi|397502952|ref|XP_003822100.1| PREDICTED: high mobility group protein B3-like [Pan paniscus]
gi|410056873|ref|XP_003317692.2| PREDICTED: high mobility group protein B3-like [Pan troglodytes]
Length = 221
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
KKDPN KRP S FF+F EF K +P + ++ + K GE W + +D EK P+ K
Sbjct: 106 KKDPNALKRPLSGFFLFCSEFHPKIKSTNPGI-SIGDMAKKLGEMWINYSDREKQPYITK 164
Query: 110 AAKRKLDYEKLMTAYNKK 127
AA K YEK + Y K
Sbjct: 165 AADLKEKYEKDVADYKSK 182
>gi|195025112|ref|XP_001986001.1| GH21124 [Drosophila grimshawi]
gi|193902001|gb|EDW00868.1| GH21124 [Drosophila grimshawi]
Length = 111
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 47/66 (71%), Gaps = 3/66 (4%)
Query: 54 NKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKR 113
+KPKRP SA+ ++L R+ K+E+P +K V+ V K GGE W+++ D K+ +EAKAAK
Sbjct: 3 DKPKRPLSAYMLWLNSARESIKKENPGIK-VTEVAKRGGELWRAMKD--KSEWEAKAAKA 59
Query: 114 KLDYEK 119
K DY++
Sbjct: 60 KDDYDR 65
>gi|395856570|ref|XP_003800699.1| PREDICTED: high mobility group protein B1-like [Otolemur garnettii]
Length = 161
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKR PSAFF+F E+R K EHP + ++ V K GE W + +K P E KA
Sbjct: 39 KDPNAPKRLPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPEEKKA 97
Query: 111 AK 112
AK
Sbjct: 98 AK 99
>gi|414585862|tpg|DAA36433.1| TPA: HMG1 protein [Zea mays]
Length = 123
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 34/50 (68%)
Query: 57 KRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPF 106
KR + FF FL EFR Y ++HP +K V V KA GEKW+S++D EKA +
Sbjct: 20 KRGLTPFFAFLAEFRPQYLEKHPELKGVKEVSKAAGEKWRSMSDEEKAKY 69
>gi|389608535|dbj|BAM17877.1| high mobility group protein D [Papilio xuthus]
Length = 121
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 48/72 (66%), Gaps = 3/72 (4%)
Query: 54 NKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKR 113
+KPKRP SA+ ++L R+ K ++P ++ V+ + K GGE W+S+ D K+ +EAKAAK
Sbjct: 3 DKPKRPMSAYMLWLNSAREQIKADNPGLR-VTEIAKKGGEIWRSMED--KSVWEAKAAKA 59
Query: 114 KLDYEKLMTAYN 125
K Y K + +YN
Sbjct: 60 KEQYTKDLESYN 71
>gi|414585863|tpg|DAA36434.1| TPA: hypothetical protein ZEAMMB73_396569 [Zea mays]
Length = 119
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 34/50 (68%)
Query: 57 KRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPF 106
KR + FF FL EFR Y ++HP +K V V KA GEKW+S++D EKA +
Sbjct: 20 KRGLTPFFAFLAEFRPQYLEKHPELKGVKEVSKAAGEKWRSMSDEEKAKY 69
>gi|146412508|ref|XP_001482225.1| hypothetical protein PGUG_05245 [Meyerozyma guilliermondii ATCC
6260]
gi|146392989|gb|EDK41147.1| hypothetical protein PGUG_05245 [Meyerozyma guilliermondii ATCC
6260]
Length = 90
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DP+ PKR SA+ F E R + + E+P + A VGK GEKWK++ EK P+E KA
Sbjct: 13 DPDAPKRSLSAYMFFANENRDIIRAENPGI-AFGQVGKLLGEKWKAMNADEKVPYETKAE 71
Query: 112 KRKLDYEKLMTAYNKKQ 128
K YEK Y K+
Sbjct: 72 ADKKRYEKEKAEYAKRN 88
>gi|70946314|ref|XP_742884.1| high mobility group protein [Plasmodium chabaudi chabaudi]
gi|56522109|emb|CAH79930.1| high mobility group protein, putative [Plasmodium chabaudi
chabaudi]
Length = 102
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 49/87 (56%), Gaps = 5/87 (5%)
Query: 41 KRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNV-KAVSAVGKAGGEKWKSLT 99
KR KN KKDP+ PKR SA+ F +E R P++ K V+ VGK GE W L
Sbjct: 16 KRRKN----KKDPHAPKRSLSAYMFFAKEKRAEIITRDPSLSKDVATVGKMIGEAWNKLD 71
Query: 100 DAEKAPFEAKAAKRKLDYEKLMTAYNK 126
+ EKAP+E KA + KL YEK Y K
Sbjct: 72 EREKAPYEKKAQEDKLRYEKEKMEYAK 98
>gi|195431784|ref|XP_002063908.1| GK15924 [Drosophila willistoni]
gi|194159993|gb|EDW74894.1| GK15924 [Drosophila willistoni]
Length = 111
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 46/66 (69%), Gaps = 3/66 (4%)
Query: 54 NKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKR 113
+KPKRP SA+ ++L R K+E+P +K V+ V K GGE W+++ D K+ +EAKAAK
Sbjct: 3 DKPKRPLSAYMLWLNSARDSIKRENPGIK-VTEVAKRGGELWRAMKD--KSEWEAKAAKA 59
Query: 114 KLDYEK 119
K DY++
Sbjct: 60 KDDYDR 65
>gi|146163497|ref|XP_001011529.2| HMG box family protein [Tetrahymena thermophila]
gi|146146042|gb|EAR91284.2| HMG box family protein [Tetrahymena thermophila SB210]
Length = 2400
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/92 (29%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 37 RSSNKRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWK 96
++ NK S KDP+ PK+P +A+ ++ + ++ + Q++PN ++ + K ++W
Sbjct: 2189 KTGNKSGVPKNSEIKDPDMPKKPSTAYILYFKNRKEKFLQQYPNF-GITEITKLIAKEWS 2247
Query: 97 SLTDAEKAPFEAKAAKRKLDYEKLMTAYNKKQ 128
L+ ++ PF A K KLDY + M Y K
Sbjct: 2248 ELSREKQIPFLRDAEKAKLDYIERMKEYASKH 2279
>gi|405121060|gb|AFR95829.1| nonhistone protein 6 [Cryptococcus neoformans var. grubii H99]
Length = 116
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 47 KSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPF 106
K KKDPNKPKR SA+ F++++R+ K E+P VGK G KW+ + + EK P+
Sbjct: 19 KRTKKDPNKPKRALSAYMFFVQDYRERIKAENPEA-TFGDVGKLLGIKWREMNENEKKPY 77
Query: 107 EAKA 110
EAKA
Sbjct: 78 EAKA 81
>gi|328856362|gb|EGG05484.1| hypothetical protein MELLADRAFT_31192 [Melampsora larici-populina
98AG31]
Length = 82
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
+KDPN PKRP SA+ F +++R+ K E+P V + +G+ G KWKSL + EK P+E
Sbjct: 7 EKDPNAPKRPLSAYMFFSQDWRERIKTENPEV-SFGEIGRLLGLKWKSLGEEEKKPYEDM 65
Query: 110 AAKRKLDYEKLMTAYNK 126
A + K +E Y +
Sbjct: 66 ACRDKKRHETEKAEYER 82
>gi|50421411|ref|XP_459256.1| DEHA2D17710p [Debaryomyces hansenii CBS767]
gi|74631679|sp|Q6BRB4.1|NHP6_DEBHA RecName: Full=Non-histone chromosomal protein 6
gi|49654923|emb|CAG87430.1| DEHA2D17710p [Debaryomyces hansenii CBS767]
Length = 92
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DP+ PKR SA+ F E R + + E+P + + VGK GEKWK+LT +K P+E KA
Sbjct: 15 DPDAPKRSLSAYMFFANENRDIVRAENPGI-SFGQVGKLLGEKWKALTPEDKIPYENKAD 73
Query: 112 KRKLDYEKLMTAYNKKQ 128
K YEK Y KK
Sbjct: 74 TDKKRYEKEKAEYAKKN 90
>gi|157832121|pdb|1NHM|A Chain A, The Structure Of The Hmg Box And Its Interaction With Dna
gi|157832122|pdb|1NHN|A Chain A, The Structure Of The Hmg Box And Its Interaction With Dna
Length = 81
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 54 NKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKR 113
N PKRPPSAFF+F E+R K EHP + ++ V K GE W + +K P+E KAAK
Sbjct: 3 NAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKAAKL 61
Query: 114 KLDYEKLMTAYNKK 127
K YEK + AY K
Sbjct: 62 KEKYEKDIAAYRAK 75
>gi|156101624|ref|XP_001616505.1| high mobility group protein [Plasmodium vivax Sal-1]
gi|148805379|gb|EDL46778.1| high mobility group protein, putative [Plasmodium vivax]
Length = 107
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 49/87 (56%), Gaps = 5/87 (5%)
Query: 41 KRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNV-KAVSAVGKAGGEKWKSLT 99
KR KN KKDP+ PKR SA+ F +E R P++ K V+ VGK GE W L
Sbjct: 20 KRRKN----KKDPHAPKRSLSAYMFFAKEKRAEIISRDPDLSKDVATVGKMIGEAWNKLD 75
Query: 100 DAEKAPFEAKAAKRKLDYEKLMTAYNK 126
+ EKAP+E KA + KL YE+ Y K
Sbjct: 76 EREKAPYEKKAQEDKLRYEREKVEYAK 102
>gi|444732719|gb|ELW72994.1| High mobility group protein B1 [Tupaia chinensis]
Length = 289
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPF 106
DPN PKRPPSAFF+F E+R K EHP + +V V K GE W + EK P+
Sbjct: 91 DPNSPKRPPSAFFLFCSEYRPKIKGEHPGL-SVGDVTKKLGEMWNNTAADEKQPY 144
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFEAKA 110
DP KP+ S++ F++ R+ +K++HP+ S K E+WK+++ EK FE A
Sbjct: 5 DPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAEEKGKFEDMA 64
Query: 111 AKRKLDYEKLMTAY 124
K YE+ M Y
Sbjct: 65 KADKARYEREMKTY 78
>gi|440900657|gb|ELR51738.1| High mobility group protein B1 [Bos grunniens mutus]
Length = 224
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPF 106
KDPN PKRPPSAFF+F E+R K EHP + ++ V K GE W + +K P+
Sbjct: 90 KDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPY 144
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DP KP+ S++ F++ R+ +K++HP+ S K E+WK+++ EK FE
Sbjct: 2 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K YE+ M Y
Sbjct: 62 DMAKADKARYEREMKTY 78
>gi|302673176|ref|XP_003026275.1| hypothetical protein SCHCODRAFT_62473 [Schizophyllum commune H4-8]
gi|300099956|gb|EFI91372.1| hypothetical protein SCHCODRAFT_62473 [Schizophyllum commune H4-8]
Length = 81
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
+KDPN PKRP +++ ++ + R+ K+++P + + + E WKSL + EK+ +EAK
Sbjct: 8 EKDPNAPKRPATSYILYQNDCRQSMKEKNPGLHNTELL-RYISETWKSLPEQEKSSYEAK 66
Query: 110 AAKRKLDYEKLMTAY 124
AAK K DYE + Y
Sbjct: 67 AAKLKHDYEDAVREY 81
>gi|51339|emb|CAA47900.1| high mobility group 2 protein [Mus musculus]
Length = 205
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 54 NKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKR 113
N PKRPPSAF +F E R K E+P + ++ K GE W + EK P+E KAAK
Sbjct: 93 NAPKRPPSAFCLFCSENRPKIKIEYPGL-SIGDTAKKLGEMWSEQSAKEKQPYEQKAAKL 151
Query: 114 KLDYEKLMTAY 124
K YEK AY
Sbjct: 152 KEKYEKDFAAY 162
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DP KP S++ F++ R+ +K++HPN + + K ++WK+++ E + FE
Sbjct: 2 GKGDPIKPLGKMSSYAFFVQTCREEHKKKHPNSSVNFAEISKKCSKRWKTMSAKENSKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K Y + M Y
Sbjct: 62 DLAKSDKACYYREMKNY 78
>gi|159162245|pdb|1E7J|A Chain A, Hmg-D Complexed To A Bulge Dna
Length = 74
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 47/66 (71%), Gaps = 3/66 (4%)
Query: 54 NKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKR 113
+KPKRP SA+ ++L R+ K+E+P +K V+ V K GGE W+++ D K+ +EAKAAK
Sbjct: 3 DKPKRPLSAYMLWLNSARESIKRENPGIK-VTEVAKRGGELWRAMKD--KSEWEAKAAKA 59
Query: 114 KLDYEK 119
K DY++
Sbjct: 60 KDDYDR 65
>gi|321259756|ref|XP_003194598.1| nonhistone protein 6 [Cryptococcus gattii WM276]
gi|317461070|gb|ADV22811.1| Nonhistone protein 6, putative [Cryptococcus gattii WM276]
Length = 110
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEA 108
+KKDPNKPKR SA+ F++++R+ K E+P VGK G KW+ + + EK P+EA
Sbjct: 21 SKKDPNKPKRALSAYMFFVQDYRERIKAENPEA-TFGDVGKLLGIKWREMNENEKKPYEA 79
Query: 109 KA 110
KA
Sbjct: 80 KA 81
>gi|72051831|ref|XP_792040.1| PREDICTED: high mobility group protein 1 homolog
[Strongylocentrotus purpuratus]
gi|115767180|ref|XP_001176807.1| PREDICTED: high mobility group protein 1 homolog
[Strongylocentrotus purpuratus]
Length = 204
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEA 108
AKKDP+ PKR SAFF+F + R KQEH + +V + +A WK++T A+KA ++A
Sbjct: 91 AKKDPDAPKRNLSAFFLFSRDERGAIKQEHKDW-SVGKIAQALAAIWKTITPADKAKYDA 149
Query: 109 KAAKRKLDYEKLMTAY 124
+AA K Y + M A+
Sbjct: 150 EAALEKQRYMREMAAF 165
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
KKDPNKP+ SA+ F+++ R+ + N A S K ++WK + D +K PF K
Sbjct: 5 KKDPNKPRGRMSAYAYFVQD-RRSKAEGQVNFTAFS---KECADRWKHMDDGDKRPFNDK 60
Query: 110 AAKRKLDYEKLMTAY 124
+A K+ Y++ M+ Y
Sbjct: 61 SASDKIRYDREMSGY 75
>gi|24657284|ref|NP_726109.1| high mobility group protein D, isoform A [Drosophila melanogaster]
gi|24657287|ref|NP_726110.1| high mobility group protein D, isoform B [Drosophila melanogaster]
gi|281363985|ref|NP_001163244.1| high mobility group protein D, isoform C [Drosophila melanogaster]
gi|195346535|ref|XP_002039813.1| GM15859 [Drosophila sechellia]
gi|195585534|ref|XP_002082536.1| GD11622 [Drosophila simulans]
gi|729733|sp|Q05783.1|HMGD_DROME RecName: Full=High mobility group protein D; Short=HMG-D
gi|157626|gb|AAA28609.1| high mobility group protein [Drosophila melanogaster]
gi|296943|emb|CAA50468.1| Hmg-D protein [Drosophila melanogaster]
gi|7291330|gb|AAF46759.1| high mobility group protein D, isoform A [Drosophila melanogaster]
gi|21392016|gb|AAM48362.1| LD24628p [Drosophila melanogaster]
gi|21645449|gb|AAM71011.1| high mobility group protein D, isoform B [Drosophila melanogaster]
gi|116805826|emb|CAL26283.1| CG17950 [Drosophila melanogaster]
gi|116805828|emb|CAL26284.1| CG17950 [Drosophila melanogaster]
gi|116805830|emb|CAL26285.1| CG17950 [Drosophila melanogaster]
gi|116805832|emb|CAL26286.1| CG17950 [Drosophila melanogaster]
gi|116805834|emb|CAL26287.1| CG17950 [Drosophila melanogaster]
gi|116805836|emb|CAL26288.1| CG17950 [Drosophila melanogaster]
gi|116805838|emb|CAL26289.1| CG17950 [Drosophila melanogaster]
gi|116805840|emb|CAL26290.1| CG17950 [Drosophila melanogaster]
gi|116805842|emb|CAL26291.1| CG17950 [Drosophila melanogaster]
gi|116805844|emb|CAL26292.1| CG17950 [Drosophila melanogaster]
gi|116805846|emb|CAL26293.1| CG17950 [Drosophila melanogaster]
gi|116805848|emb|CAL26294.1| CG17950 [Drosophila simulans]
gi|194135162|gb|EDW56678.1| GM15859 [Drosophila sechellia]
gi|194194545|gb|EDX08121.1| GD11622 [Drosophila simulans]
gi|220943924|gb|ACL84505.1| HmgD-PA [synthetic construct]
gi|220953800|gb|ACL89443.1| HmgD-PA [synthetic construct]
gi|223967235|emb|CAR93348.1| CG17950-PA [Drosophila melanogaster]
gi|223967237|emb|CAR93349.1| CG17950-PA [Drosophila melanogaster]
gi|223967239|emb|CAR93350.1| CG17950-PA [Drosophila melanogaster]
gi|223967241|emb|CAR93351.1| CG17950-PA [Drosophila melanogaster]
gi|223967243|emb|CAR93352.1| CG17950-PA [Drosophila melanogaster]
gi|223967245|emb|CAR93353.1| CG17950-PA [Drosophila melanogaster]
gi|223967247|emb|CAR93354.1| CG17950-PA [Drosophila melanogaster]
gi|223967249|emb|CAR93355.1| CG17950-PA [Drosophila melanogaster]
gi|223967251|emb|CAR93356.1| CG17950-PA [Drosophila melanogaster]
gi|223967253|emb|CAR93357.1| CG17950-PA [Drosophila melanogaster]
gi|223967255|emb|CAR93358.1| CG17950-PA [Drosophila melanogaster]
gi|223967257|emb|CAR93359.1| CG17950-PA [Drosophila melanogaster]
gi|272432624|gb|ACZ94516.1| high mobility group protein D, isoform C [Drosophila melanogaster]
Length = 112
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 47/66 (71%), Gaps = 3/66 (4%)
Query: 54 NKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKR 113
+KPKRP SA+ ++L R+ K+E+P +K V+ V K GGE W+++ D K+ +EAKAAK
Sbjct: 3 DKPKRPLSAYMLWLNSARESIKRENPGIK-VTEVAKRGGELWRAMKD--KSEWEAKAAKA 59
Query: 114 KLDYEK 119
K DY++
Sbjct: 60 KDDYDR 65
>gi|968888|dbj|BAA09924.1| HMG-1 [Homo sapiens]
Length = 215
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPF 106
KDPN PKRPPSAFF+F E+R K EHP + ++ V K GE W + +K P+
Sbjct: 90 KDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPY 144
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DP KP+R S++ F++ R+ +K++HP+ S K E+WK+++ EK FE
Sbjct: 2 GKGDPKKPRRKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K YE+ M Y
Sbjct: 62 DMAKADKARYEREMKTY 78
>gi|6730529|pdb|1QRV|A Chain A, Crystal Structure Of The Complex Of Hmg-D And Dna
gi|6730530|pdb|1QRV|B Chain B, Crystal Structure Of The Complex Of Hmg-D And Dna
Length = 73
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 47/66 (71%), Gaps = 3/66 (4%)
Query: 54 NKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKR 113
+KPKRP SA+ ++L R+ K+E+P +K V+ V K GGE W+++ D K+ +EAKAAK
Sbjct: 2 DKPKRPLSAYMLWLNSARESIKRENPGIK-VTEVAKRGGELWRAMKD--KSEWEAKAAKA 58
Query: 114 KLDYEK 119
K DY++
Sbjct: 59 KDDYDR 64
>gi|440911425|gb|ELR61099.1| High mobility group protein B3, partial [Bos grunniens mutus]
Length = 192
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
KKDP PKR PS +F EF K HP + ++ V K GE W +L+D+EK P+ K
Sbjct: 88 KKDPKAPKRLPSGCLLFCSEFHPKIKSTHPGI-SIRDVAKKLGEMWNNLSDSEKQPYINK 146
Query: 110 AAKRKLDYEK 119
AAK K YEK
Sbjct: 147 AAKLK-KYEK 155
Score = 38.9 bits (89), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 46 VKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKA 104
VK A DP KPK A+ F++ R+ +K+++ V + K E+WK+++ EK+
Sbjct: 1 VKMAISDPKKPKGKMCAYAFFVQMCREEHKKKNSEVPVNFAEFSKKCSERWKTMSRKEKS 60
Query: 105 PFEAKAAKRKLDYEKLMTAYN 125
F+ A K+ Y++ M Y
Sbjct: 61 KFDEMAKVYKMHYDQEMKDYG 81
>gi|345780695|ref|XP_851529.2| PREDICTED: high mobility group protein B4 [Canis lupus familiaris]
Length = 193
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DP P+RPPS+F +F ++ K+E+P V V KA G W + AEK P+E +AA
Sbjct: 91 DPQAPRRPPSSFLIFCQDHYAQLKRENPTWSVVQ-VAKASGRMWSVTSGAEKQPYEQRAA 149
Query: 112 KRKLDYEKLMTAYNKK 127
+ Y++ + Y ++
Sbjct: 150 VLRARYQEELEVYRQQ 165
Score = 39.7 bits (91), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 55 KPKRPPSAFFVFLEEFRKVYKQEHPNVK-AVSAVGKAGGEKWKSLTDAEKAPFEAKAAKR 113
+PK S++ FL +R +K++ PN + EKW+S++ EKA +EA A
Sbjct: 10 RPKVNVSSYIHFLLNYRNKFKEQQPNTYLGFKEFSRKCSEKWRSISKHEKAKYEALAKLD 69
Query: 114 KLDYEKLMTAY 124
K Y++ M Y
Sbjct: 70 KARYQEEMMNY 80
>gi|409079498|gb|EKM79859.1| hypothetical protein AGABI1DRAFT_57086 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 547
Score = 57.8 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 38/102 (37%), Positives = 56/102 (54%), Gaps = 5/102 (4%)
Query: 28 KRKAVLKASRSSNKRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAV 87
KR+ +A++ K K+ KS KDPN PK+P SA+F+FL+ R K H +
Sbjct: 402 KRENAYRAAQ--RKAGKSRKSNIKDPNAPKKPLSAYFMFLQRIRANPKLVHDIFGDETET 459
Query: 88 GKA---GGEKWKSLTDAEKAPFEAKAAKRKLDYEKLMTAYNK 126
K KW+S+TDAE+ PF A+A + K++YE Y +
Sbjct: 460 TKQSVLAAAKWRSMTDAERQPFLAQAEQEKMEYEAARRIYEE 501
>gi|349804477|gb|AEQ17711.1| putative high mobility group protein-1 [Hymenochirus curtipes]
Length = 143
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 38/60 (63%), Gaps = 4/60 (6%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F +FR K EHP + + V K GE W + D +K P+E KA
Sbjct: 88 KDPNAPKRPPSAFFLFCSDFR--IKGEHPGL-TIGDVAKKLGEMWNNTVD-DKLPYERKA 143
Score = 36.6 bits (83), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DP KP+ S++ F++ R+ +K+ HP+ S K E+WK++++ K+ FE
Sbjct: 2 GKGDPKKPRGKMSSYAYFVQTCREEHKK-HPDASVNFSEFSKKCSERWKTMSEG-KSKFE 59
Query: 108 AKAAKRKLDYEKLMTAY 124
A K+ YE+ M Y
Sbjct: 60 DMAKADKVRYEREMKTY 76
>gi|46394418|gb|AAS91553.1| AmphiHMG1/2 [Branchiostoma belcheri tsingtauense]
Length = 222
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
KKDPN PKR SAFF++ + R + HP+ + V + K G++WK ++D++KA +E K
Sbjct: 92 KKDPNAPKRAMSAFFMYCADARPKVRAAHPDFQ-VGDIAKILGKQWKEISDSDKAKYEKK 150
Query: 110 AAKRKLDYEKLMTAYNK 126
A K Y+K + Y +
Sbjct: 151 AQTEKARYQKELAEYKR 167
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAV-SAVGKAGGEKWKSLTDAEKAPFEAK 109
KD NKPK SA+ F++E R+ +++++PN + V + + +WK++ D EK F+A
Sbjct: 3 KDKNKPKGKMSAYACFVQECRREHEKKYPNKQVVFTEFSQKCASRWKTMNDDEKKRFQAL 62
Query: 110 AAKRKLDYEKLMTAY 124
A K YE+ M Y
Sbjct: 63 AEADKRRYEQDMAKY 77
>gi|169610541|ref|XP_001798689.1| hypothetical protein SNOG_08374 [Phaeosphaeria nodorum SN15]
gi|160702095|gb|EAT84650.2| hypothetical protein SNOG_08374 [Phaeosphaeria nodorum SN15]
Length = 106
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 53 PNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAK 112
PN PKR SA+ F E R ++++P +K VGK GEKWK+L + ++ P+EAKAA
Sbjct: 25 PNAPKRGLSAYMFFANEQRDKVREDNPGIK-FGEVGKMLGEKWKALNEKQRTPYEAKAAA 83
Query: 113 RKLDYEKLMTAY 124
K YE+ AY
Sbjct: 84 DKKRYEEEKAAY 95
>gi|449272347|gb|EMC82325.1| FACT complex subunit SSRP1 [Columba livia]
Length = 704
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRP SA+ ++L R+ K +HP + +++ + K GE WK+++ +K ++ KA
Sbjct: 540 KDPNAPKRPMSAYMLWLNASRERIKSDHPGI-SITDLSKKAGELWKAMSKEKKEEWDRKA 598
Query: 111 AKRKLDYEKLMTAYN 125
+ DYEK M Y+
Sbjct: 599 EDARRDYEKAMKEYS 613
>gi|432104603|gb|ELK31215.1| High mobility group protein B1 [Myotis davidii]
Length = 201
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Query: 46 VKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAP 105
K+ KDPN+PKRPPSAFF+F E+ K EHP + ++ + + GE W + +K P
Sbjct: 85 TKNTFKDPNEPKRPPSAFFLFCSEYCPKIKGEHPGL-SIGDIAEKLGEMWNNTAADDKQP 143
Query: 106 FEAKAAKRKLDYEKLMTAYNKK 127
E KAAK K YEK + A+ K
Sbjct: 144 HEKKAAKLKEKYEKDIAAHRAK 165
Score = 38.9 bits (89), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DP KP+ S+ F++ + +K++HP+ S K E+WK+++ EK FE
Sbjct: 2 GKGDPKKPRGKTSSCAFFVQTYWDEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K Y++ M Y
Sbjct: 62 DMAKADKARYKREMKTY 78
>gi|159162413|pdb|1HMA|A Chain A, The Solution Structure And Dynamics Of The Dna Binding
Domain Of Hmg-D From Drosophila Melanogaster
Length = 73
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 47/66 (71%), Gaps = 3/66 (4%)
Query: 54 NKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKR 113
+KPKRP SA+ ++L R+ K+E+P +K V+ V K GGE W+++ D K+ +EAKAAK
Sbjct: 2 DKPKRPLSAYMLWLNSARESIKRENPGIK-VTEVAKRGGELWRAMKD--KSEWEAKAAKA 58
Query: 114 KLDYEK 119
K DY++
Sbjct: 59 KDDYDR 64
>gi|395857418|ref|XP_003801091.1| PREDICTED: high mobility group protein B1-like [Otolemur garnettii]
Length = 197
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRP SAFF+F E+ K EHP + ++ V K G W + +K P+E KA
Sbjct: 132 KDPNAPKRPLSAFFLFCSEYCPKSKGEHPGL-SIGEVAKKLGVMWNNTAADDKQPYEKKA 190
Query: 111 AKRKL 115
AK KL
Sbjct: 191 AKLKL 195
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Query: 44 KNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAV-SAVGKAGGEKWKSLTDAE 102
K K K DP K + S+ F++ + +K++HP S K E+WK+++ E
Sbjct: 39 KITKHGKGDPKKLRGKMSSCAFFVQTSWEEHKKKHPGASVTFSEFSKKCSERWKTMSGKE 98
Query: 103 KAPFEAKAAKRKLDYEKLMTAY 124
+ FE A K YE+ M Y
Sbjct: 99 RGKFEDMAKADKAPYEREMKTY 120
>gi|351708060|gb|EHB10979.1| High mobility group protein B1 [Heterocephalus glaber]
Length = 241
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKR PSAFF+F E+ K E+P + ++ V K GE W + +K P++ KA
Sbjct: 89 KDPNAPKRLPSAFFLFCSEYHPKIKGEYPGL-SIGDVAKKLGEIWNNTAADDKQPYKKKA 147
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK +TAY K
Sbjct: 148 AKLKEKYEKDITAYQAK 164
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DP K + S+ F++ R+ +K++HPN S K E+WK++ EK FE
Sbjct: 2 GKGDPKKLRGKMSSHAFFVQTCREEHKKKHPNAFVNFSEFSKKCSERWKTMFAKEKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
K YE+ M Y
Sbjct: 62 DMTKADKAHYEREMKTY 78
>gi|354488105|ref|XP_003506211.1| PREDICTED: FACT complex subunit SSRP1-like isoform 1 [Cricetulus
griseus]
gi|354488107|ref|XP_003506212.1| PREDICTED: FACT complex subunit SSRP1-like isoform 2 [Cricetulus
griseus]
gi|344253527|gb|EGW09631.1| FACT complex subunit SSRP1 [Cricetulus griseus]
Length = 709
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 59/106 (55%), Gaps = 6/106 (5%)
Query: 23 DRAAGKRKAVLKA----SRSSNKRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEH 78
DR KRK + +A R S K++ K K DPN PKRP SA+ ++L R+ K +H
Sbjct: 511 DREEKKRKQLKRAKMAKDRKSRKKSSEAKKGK-DPNAPKRPMSAYMLWLNASREKIKSDH 569
Query: 79 PNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKLDYEKLMTAY 124
P + +++ + K GE WK ++ +K ++ KA + +YEK M Y
Sbjct: 570 PGI-SITDLSKKAGEIWKGMSKEKKEEWDRKAEDARREYEKAMKEY 614
>gi|296221849|ref|XP_002756934.1| PREDICTED: high mobility group protein B1-like [Callithrix jacchus]
Length = 203
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KD N PKRPPSAFF+F E+R K EHP + ++ V K GE W + +K P+E KA
Sbjct: 87 KDRNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWSNTAADDKQPYEKKA 145
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K EK + AY K
Sbjct: 146 AKLKEKCEKDIAAYRAK 162
>gi|119623033|gb|EAX02628.1| hCG1644442 [Homo sapiens]
Length = 201
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
KKDPN KRP S FF+F EF K +P + ++ + K GE W + +D EK P+ K
Sbjct: 86 KKDPNALKRPLSGFFLFCSEFHPKIKSTNPGI-SIGDMAKKLGEMWINYSDREKQPYITK 144
Query: 110 AAKRKLDYEKLMTAYNKK 127
AA K YEK + Y K
Sbjct: 145 AADLKEKYEKDVADYKSK 162
>gi|384489718|gb|EIE80940.1| hypothetical protein RO3G_05645 [Rhizopus delemar RA 99-880]
Length = 176
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Query: 47 KSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPF 106
K +KDPN PKR S++ ++ + R EHP++KA+ + K GE W L++ EKAP+
Sbjct: 46 KKVEKDPNAPKRNLSSYMLYSQAVRPKVAAEHPDMKAIE-IAKLVGEMWNKLSEKEKAPY 104
Query: 107 EAKAAKRKLDYEKLMTAY 124
+A K K+ +EK +Y
Sbjct: 105 IKQAEKEKIRFEKENASY 122
>gi|301097589|ref|XP_002897889.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262106637|gb|EEY64689.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 210
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
KKDPN PKR SA+F F + R+ + E+PN K ++ + EKW++L D ++A ++
Sbjct: 111 KKDPNAPKRALSAYFFFCNDIRQEVRDENPN-KKITEIATLLAEKWRALPDKKRAKYQKM 169
Query: 110 AAKRKLDYEKLMTAYN 125
+ K+ Y++ M YN
Sbjct: 170 NEEAKVKYQQQMDVYN 185
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
KKD N PKR SAF F + R K+E P+++ + + G +WK ++D ++ P++
Sbjct: 23 KKDKNAPKRALSAFMFFSNDIRDTVKKEMPDLQFLE-ISSEIGRRWKQISDEDRRPYDEL 81
Query: 110 AAKRKLDYEKLMTAY 124
AA K Y++ Y
Sbjct: 82 AAADKRRYQEEKEDY 96
>gi|260806967|ref|XP_002598355.1| hypothetical protein BRAFLDRAFT_57556 [Branchiostoma floridae]
gi|229283627|gb|EEN54367.1| hypothetical protein BRAFLDRAFT_57556 [Branchiostoma floridae]
Length = 223
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 47 KSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPF 106
K KKDPN PKR SAFF++ + R + HP+ + V + K G +WK ++D++KA +
Sbjct: 90 KRKKKDPNAPKRAMSAFFMYCADARPKVRAAHPDFQ-VGEIAKILGRQWKEISDSDKAKY 148
Query: 107 EAKAAKRKLDYEKLMTAYNK 126
E KA K Y+K + Y +
Sbjct: 149 EKKAQTEKARYQKELAEYKR 168
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAV-SAVGKAGGEKWKSLTDAEKAPFEAK 109
KD NKPK SA+ F++E RK +++++P+ + V + K E+WK++ D EK F+
Sbjct: 4 KDKNKPKGKMSAYACFVQECRKEHEKKYPDKQVVFTEFSKKCAERWKTMNDGEKKRFQDL 63
Query: 110 AAKRKLDYEKLMTAY 124
A K YE+ M Y
Sbjct: 64 AETDKRRYEREMAKY 78
>gi|1083056|pir||B61611 nonhistone chromosomal protein HMG-2 - bovine (fragments)
Length = 186
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 54 NKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKR 113
N PKRPPSAFF+F E R K EHP + ++ K GE W + +K P+E KA+K
Sbjct: 85 NAPKRPPSAFFLFSAEHRPKIKAEHPGL-SIGDTAKKLGEMWSQQSAKDKQPYEQKASKL 143
Query: 114 KLDYEK 119
K YEK
Sbjct: 144 KEKYEK 149
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 6/76 (7%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEA 108
K DPNKP+ S++ F++ R+ +K++HP+ + E+WK+++ EK+ FE
Sbjct: 1 GKGDPNKPRGKMSSYAFFVQTSREEHKKKHPDASVNFS------ERWKTMSAKEKSKFED 54
Query: 109 KAAKRKLDYEKLMTAY 124
A K Y++ M Y
Sbjct: 55 MAKSDKARYDREMKNY 70
>gi|89475586|gb|ABD73318.1| high-mobility group box 1 [Oncorhynchus mykiss]
Length = 154
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPF 106
KDPN PKRP SAFF+F +FR K E P + ++ V K GEKW +LT +K P+
Sbjct: 89 KDPNAPKRPSSAFFIFCADFRPQVKGETPGL-SIGDVAKKLGEKWNNLTAEDKVPY 143
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFEAK 109
KDP KP+ S++ F++ R+ +K++HP S K E+W++++ EK FE
Sbjct: 3 KDPRKPRGKMSSYAYFVQTCREEHKKKHPEASVNFSEFSKKCSERWRTMSAKEKGKFEDL 62
Query: 110 AAKRKLDYEKLMTAY 124
A K+ YE+ M +Y
Sbjct: 63 AKLDKVRYEREMRSY 77
>gi|195123263|ref|XP_002006127.1| GI18728 [Drosophila mojavensis]
gi|193911195|gb|EDW10062.1| GI18728 [Drosophila mojavensis]
Length = 112
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 47/66 (71%), Gaps = 3/66 (4%)
Query: 54 NKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKR 113
+KPKRP SA+ ++L R+ K+E+P +K V+ V K GGE W+++ D K+ +EAKAAK
Sbjct: 3 DKPKRPLSAYMLWLNSAREGIKRENPGIK-VTEVAKRGGELWRAMKD--KSEWEAKAAKA 59
Query: 114 KLDYEK 119
K DY++
Sbjct: 60 KDDYDR 65
>gi|444518100|gb|ELV11958.1| High mobility group protein B1 [Tupaia chinensis]
Length = 162
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Query: 53 PNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAK 112
PN PKRPPSAFF+F E+R K EHP++ ++ V K GE W + +K P E KAAK
Sbjct: 92 PNVPKRPPSAFFLFCSEYRPKIKGEHPDL-SIGDVEKKLGEVWNNAAADDKQPCEKKAAK 150
Query: 113 RKLDYEKLMTAY 124
K YEK + AY
Sbjct: 151 LKEKYEKDIAAY 162
Score = 38.9 bits (89), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPN-VKAVSAVGKAGGEKWKSLTDAEKAPFE 107
K DP KP+ S++ F++ R+ ++++HP+ + S + E+WK+++ EK E
Sbjct: 2 GKGDPKKPRGKMSSYAFFVQTCREEHRKKHPDALVDFSEFSQKCSERWKTMSAEEKGKLE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K YE+ M Y
Sbjct: 62 DMAKVDKARYEREMRTY 78
>gi|358337037|dbj|GAA55457.1| structure-specific recognition protein 1 [Clonorchis sinensis]
Length = 723
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN P RPP+A+ ++ E R + N +V+ V KA GE+W+++ KA ++A+
Sbjct: 574 KDPNAPSRPPTAYIMWFNEHRDEISKSIGNPTSVAEVAKAAGERWRNIDSETKAKYQARV 633
Query: 111 AKRKLDYEKLMTAYNKK 127
+ K +YE M Y K
Sbjct: 634 DELKKNYESEMRIYRNK 650
>gi|68063985|ref|XP_673987.1| high mobility group protein [Plasmodium berghei strain ANKA]
gi|56492229|emb|CAH99818.1| high mobility group protein, putative [Plasmodium berghei]
Length = 96
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 49/87 (56%), Gaps = 5/87 (5%)
Query: 41 KRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNV-KAVSAVGKAGGEKWKSLT 99
KR KN KKDP+ PKR SA+ F +E R P++ K V+ VGK GE W L
Sbjct: 10 KRRKN----KKDPHAPKRSLSAYMFFAKEKRAEIITRDPSLSKDVATVGKMIGEAWNKLD 65
Query: 100 DAEKAPFEAKAAKRKLDYEKLMTAYNK 126
+ EKAP+E KA + K+ YEK Y K
Sbjct: 66 EREKAPYEKKAQEDKIRYEKEKMEYAK 92
>gi|194755948|ref|XP_001960241.1| GF13265 [Drosophila ananassae]
gi|190621539|gb|EDV37063.1| GF13265 [Drosophila ananassae]
Length = 111
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 46/66 (69%), Gaps = 3/66 (4%)
Query: 54 NKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKR 113
+KPKRP SA+ ++L R K+E+P +K V+ V K GGE W+++ D K+ +EAKAAK
Sbjct: 3 DKPKRPLSAYMLWLNSARDSIKRENPGIK-VTEVAKKGGELWRAMKD--KSEWEAKAAKA 59
Query: 114 KLDYEK 119
K DY++
Sbjct: 60 KDDYDR 65
>gi|351715817|gb|EHB18736.1| High mobility group protein B1 [Heterocephalus glaber]
Length = 165
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F E+ K EHP + ++ V K GE W + +K P+E KA
Sbjct: 90 KDPNAPKRPPSAFFLFYSEYCPQIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKA 148
Query: 111 AKRKLDYEK 119
AK K YEK
Sbjct: 149 AKLKEKYEK 157
Score = 42.4 bits (98), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DP KP+ S + F++ R+ +K++HP+ S K E+WK+++ EK FE
Sbjct: 2 GKGDPKKPRGKMSLYAFFVQTCREEHKKKHPDASINFSEFSKKCSERWKTMSAKEKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K YE+ M Y
Sbjct: 62 DMAKADKARYEREMKTY 78
>gi|392876622|gb|AFM87143.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 58 RPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKLDY 117
RPPSAFF+F + R + E+P + ++ V K GE W LT +K P+E + A+ K Y
Sbjct: 96 RPPSAFFIFCSDHRPRIRGENPGI-SIGDVAKKMGELWSGLTAKDKKPYEERGAQLKEKY 154
Query: 118 EKLMTAY 124
EK + AY
Sbjct: 155 EKEVAAY 161
Score = 44.3 bits (103), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSA-VGKAGGEKWKSLTDAEKAPFE 107
K+DP +P+ S++ F++ R+ +K++HP+ S+ K E+WK++T +K FE
Sbjct: 2 GKRDPRQPRGKMSSYAFFVQNSREEHKKKHPDSSVDSSEFSKQCSERWKAMTPKDKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K+ Y++ M Y
Sbjct: 62 DLAKNDKVRYDREMRNY 78
>gi|189205162|ref|XP_001938916.1| non-histone chromosomal protein 6 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|330923152|ref|XP_003300124.1| hypothetical protein PTT_11280 [Pyrenophora teres f. teres 0-1]
gi|187986015|gb|EDU51503.1| non-histone chromosomal protein 6 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|311325919|gb|EFQ91802.1| hypothetical protein PTT_11280 [Pyrenophora teres f. teres 0-1]
Length = 106
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Query: 53 PNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAK 112
PN PKR SA+ F E R+ ++++P +K VGK GEKWK+L + ++ P+EAKAA
Sbjct: 25 PNAPKRGLSAYMFFANEQREKVREDNPGIK-FGEVGKLLGEKWKALNEKQRTPYEAKAAA 83
Query: 113 RKLDYEKLMTAYN 125
K YE+ AY
Sbjct: 84 DKKRYEEEKAAYQ 96
>gi|426192550|gb|EKV42486.1| putative HMG1 protein [Agaricus bisporus var. bisporus H97]
Length = 547
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 38/102 (37%), Positives = 56/102 (54%), Gaps = 5/102 (4%)
Query: 28 KRKAVLKASRSSNKRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAV 87
KR+ +A++ K K+ KS KDPN PK+P SA+F+FL+ R K H +
Sbjct: 402 KRENAYRAAQ--RKAGKSRKSNIKDPNAPKKPLSAYFMFLQRIRANPKLVHDIFGDETET 459
Query: 88 GKA---GGEKWKSLTDAEKAPFEAKAAKRKLDYEKLMTAYNK 126
K KW+S+TDAE+ PF A+A + K++YE Y +
Sbjct: 460 TKQSVLAAAKWRSMTDAERQPFLAQAEQEKMEYEAARRIYEE 501
>gi|401885246|gb|EJT49369.1| nonhistone protein 6 [Trichosporon asahii var. asahii CBS 2479]
gi|406694772|gb|EKC98094.1| nonhistone protein 6 [Trichosporon asahii var. asahii CBS 8904]
Length = 108
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 46 VKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAP 105
K KKDPNKPKR SA+ F++++R+ K E+P+ +VG+ G KW+ ++ +EK P
Sbjct: 13 AKRGKKDPNKPKRALSAYMFFVQDWRERIKSENPDAD-FGSVGRLLGAKWQEMSASEKKP 71
Query: 106 FEAKA 110
+E KA
Sbjct: 72 YEDKA 76
>gi|302847869|ref|XP_002955468.1| hypothetical protein VOLCADRAFT_76727 [Volvox carteri f.
nagariensis]
gi|300259310|gb|EFJ43539.1| hypothetical protein VOLCADRAFT_76727 [Volvox carteri f.
nagariensis]
Length = 645
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PK+ + F F R+ K E+P + A +GK GE+WK + EKAP+E A
Sbjct: 550 KDPNAPKKNLTGFMYFSNANREKVKAENPGI-AFGEIGKMLGERWKGMGADEKAPYEQMA 608
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K+ Y + M AY ++
Sbjct: 609 AKDKVRYAEAMKAYKER 625
>gi|118488333|gb|ABK95985.1| unknown [Populus trichocarpa]
Length = 232
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DP KPK P SAFF+F E R E+ NV V K GE+WK++T+ +K P+E A
Sbjct: 29 DPLKPKHPLSAFFLFSNERRAALLAENKNV---LEVAKIAGEEWKNMTEKQKRPYEEIAK 85
Query: 112 KRKLDYEKLMTAY 124
K K Y + M AY
Sbjct: 86 KNKEKYTQEMEAY 98
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPNKPK+P S+F +F +E RK EHP + + S + KWK L EK + KAA
Sbjct: 154 DPNKPKKPASSFLLFSKETRKSLVHEHPGINS-STLTAMISVKWKELIQEEKQIWNCKAA 212
Query: 112 KRKLDYEKLMTAYNK 126
+ Y+K + Y+K
Sbjct: 213 EAMEAYKKELEEYHK 227
>gi|392878832|gb|AFM88248.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 58 RPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKLDY 117
RPPSAFF+F + R + E+P + ++ V K GE W LT +K P+E + A+ K Y
Sbjct: 96 RPPSAFFIFCSDHRPRIRGENPGI-SIGDVAKKMGELWSGLTAKDKKPYEERGAQLKEKY 154
Query: 118 EKLMTAY 124
EK + AY
Sbjct: 155 EKEVAAY 161
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K+DP +P+ S++ F++ R+ +K++HP+ S K E+WK++T +K FE
Sbjct: 2 GKRDPRQPRGKTSSYAFFVQNSREEHKKKHPDSSVDFSEFSKQCSERWKAMTPKDKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K+ Y++ M Y
Sbjct: 62 GLAKNDKVRYDREMRNY 78
>gi|290998589|ref|XP_002681863.1| hypothetical protein NAEGRDRAFT_82958 [Naegleria gruberi]
gi|284095488|gb|EFC49119.1| hypothetical protein NAEGRDRAFT_82958 [Naegleria gruberi]
Length = 219
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 42/77 (54%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
KKDPN PK+P + +F+F +E R+ K + K+ S V K GE W SL+D +K P+ K
Sbjct: 9 KKDPNAPKKPKTGYFLFCDEHREAAKAKTGEKKSASEVSKVLGEMWNSLSDEQKKPYNDK 68
Query: 110 AAKRKLDYEKLMTAYNK 126
K Y M Y K
Sbjct: 69 YKKSLDGYNAQMEEYKK 85
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 55 KPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRK 114
PKRP +++ +F +E RK +E +K V+ V K G WK ++D +K P+ A+A K K
Sbjct: 118 APKRPLTSYMIFSQEMRKKLLEEDSTLK-VTEVAKKVGALWKKMSDEQKKPYIAQAEKLK 176
Query: 115 LDY 117
Y
Sbjct: 177 AAY 179
>gi|392884250|gb|AFM90957.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 58 RPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKLDY 117
RPPSAFF+F + R + E+P + ++ V K GE W LT +K P+E + A+ K Y
Sbjct: 96 RPPSAFFIFCSDHRPRIRGENPGI-SIGDVAKKMGELWSGLTAKDKKPYEERGAQLKEKY 154
Query: 118 EKLMTAY 124
EK + AY
Sbjct: 155 EKEVAAY 161
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K+DP +P+ S++ F++ R+ +K++HP+ S K E+WK++T +K FE
Sbjct: 2 GKRDPRQPRGKMSSYAFFVQNSREEHKKKHPDSSVDFSEFSKQCSERWKAMTPKDKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K+ Y++ M Y
Sbjct: 62 DLAKNDKVRYDREMRNY 78
>gi|392878084|gb|AFM87874.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 58 RPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKLDY 117
RPPSAFF+F + R + E+P + ++ V K GE W LT +K P+E + A+ K Y
Sbjct: 96 RPPSAFFIFCSDHRPRIRGENPGI-SIGDVAKKMGELWSGLTAKDKKPYEERGAQLKEKY 154
Query: 118 EKLMTAY 124
EK + AY
Sbjct: 155 EKEVAAY 161
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K+DP +P+ S++ F++ R+ +K++HP+ S K E+WK++T +K FE
Sbjct: 2 GKRDPRQPRGKMSSYAFFVQNSREEHKKKHPDSSVDFSEFSKQCSERWKAMTPKDKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K+ Y++ M Y
Sbjct: 62 DLAKNDKVRYDREMRNY 78
>gi|392877754|gb|AFM87709.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 58 RPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKLDY 117
RPPSAFF+F + R + E+P + ++ V K GE W LT +K P+E + A+ K Y
Sbjct: 96 RPPSAFFIFCSDHRPRIRGENPGI-SIGDVAKKMGELWSGLTAKDKKPYEERGAQLKEKY 154
Query: 118 EKLMTAY 124
EK + AY
Sbjct: 155 EKEVAAY 161
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K+DP +P+ S++ F++ R+ +K++HP+ S K E+WK++T +K FE
Sbjct: 2 GKRDPRQPRGKMSSYAFFVQNSREEHKKKHPDSSVDFSEFSKQCSERWKAMTPKDKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K+ Y++ M Y
Sbjct: 62 DLAKNDKVRYDREMRNY 78
>gi|392876068|gb|AFM86866.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 58 RPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKLDY 117
RPPSAFF+F + R + E+P + ++ V K GE W LT +K P+E + A+ K Y
Sbjct: 96 RPPSAFFIFCSDHRPRIRGENPGI-SIGDVAKKMGELWSGLTAKDKKPYEERGAQLKEKY 154
Query: 118 EKLMTAY 124
EK + AY
Sbjct: 155 EKEVAAY 161
Score = 42.7 bits (99), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K+DP +P+ S++ F++ R+ +K++HP+ S K E+WK++T +K FE
Sbjct: 2 GKRDPRQPRGKMSSYAFFVQNSREEHKKKHPDSSVDFSEFSKQCSERWKAMTPKDKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K+ Y + M Y
Sbjct: 62 DLAKNDKVRYGREMRNY 78
>gi|392873666|gb|AFM85665.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 58 RPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKLDY 117
RPPSAFF+F + R + E+P + ++ V K GE W LT +K P+E + A+ K Y
Sbjct: 96 RPPSAFFIFCSDHRPRIRGENPGI-SIGDVAKKMGELWSGLTAKDKKPYEERGAQLKEKY 154
Query: 118 EKLMTAY 124
EK + AY
Sbjct: 155 EKEVAAY 161
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K+DP +P+ S++ F++ R+ +K++HP+ S K E+WK++T +K FE
Sbjct: 2 GKRDPRQPRGKMSSYAFFVQNSREEHKKKHPDSSVDFSEFSKQCSERWKAMTPKDKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K+ Y++ M Y
Sbjct: 62 DLAKNDKVRYDREMRNY 78
>gi|387913840|gb|AFK10529.1| high mobility group protein B1-like protein [Callorhinchus milii]
gi|392873522|gb|AFM85593.1| high mobility group protein [Callorhinchus milii]
gi|392873780|gb|AFM85722.1| high mobility group protein [Callorhinchus milii]
gi|392873902|gb|AFM85783.1| high mobility group protein [Callorhinchus milii]
gi|392873908|gb|AFM85786.1| high mobility group protein [Callorhinchus milii]
gi|392873950|gb|AFM85807.1| high mobility group protein [Callorhinchus milii]
gi|392873998|gb|AFM85831.1| high mobility group protein [Callorhinchus milii]
gi|392874244|gb|AFM85954.1| high mobility group protein [Callorhinchus milii]
gi|392874940|gb|AFM86302.1| high mobility group protein [Callorhinchus milii]
gi|392876248|gb|AFM86956.1| high mobility group protein [Callorhinchus milii]
gi|392876254|gb|AFM86959.1| high mobility group protein [Callorhinchus milii]
gi|392876362|gb|AFM87013.1| high mobility group protein [Callorhinchus milii]
gi|392876946|gb|AFM87305.1| high mobility group protein [Callorhinchus milii]
gi|392877468|gb|AFM87566.1| high mobility group protein [Callorhinchus milii]
gi|392877522|gb|AFM87593.1| high mobility group protein [Callorhinchus milii]
gi|392877744|gb|AFM87704.1| high mobility group protein [Callorhinchus milii]
gi|392879776|gb|AFM88720.1| high mobility group protein [Callorhinchus milii]
gi|392880382|gb|AFM89023.1| high mobility group protein [Callorhinchus milii]
gi|392880776|gb|AFM89220.1| high mobility group protein [Callorhinchus milii]
gi|392881032|gb|AFM89348.1| high mobility group protein [Callorhinchus milii]
gi|392881292|gb|AFM89478.1| high mobility group protein [Callorhinchus milii]
gi|392881318|gb|AFM89491.1| high mobility group protein [Callorhinchus milii]
gi|392883640|gb|AFM90652.1| high mobility group protein [Callorhinchus milii]
gi|392883646|gb|AFM90655.1| high mobility group protein [Callorhinchus milii]
gi|392883680|gb|AFM90672.1| high mobility group protein [Callorhinchus milii]
gi|392883988|gb|AFM90826.1| high mobility group protein [Callorhinchus milii]
gi|392884098|gb|AFM90881.1| high mobility group protein [Callorhinchus milii]
gi|392884156|gb|AFM90910.1| high mobility group protein [Callorhinchus milii]
gi|392884178|gb|AFM90921.1| high mobility group protein [Callorhinchus milii]
gi|392884306|gb|AFM90985.1| high mobility group protein [Callorhinchus milii]
gi|392884308|gb|AFM90986.1| high mobility group protein [Callorhinchus milii]
gi|392884314|gb|AFM90989.1| high mobility group protein [Callorhinchus milii]
gi|392884420|gb|AFM91042.1| high mobility group protein [Callorhinchus milii]
gi|392884450|gb|AFM91057.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 58 RPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKLDY 117
RPPSAFF+F + R + E+P + ++ V K GE W LT +K P+E + A+ K Y
Sbjct: 96 RPPSAFFIFCSDHRPRIRGENPGI-SIGDVAKKMGELWSGLTAKDKKPYEERGAQLKEKY 154
Query: 118 EKLMTAY 124
EK + AY
Sbjct: 155 EKEVAAY 161
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K+DP +P+ S++ F++ R+ +K++HP+ S K E+WK++T +K FE
Sbjct: 2 GKRDPRQPRGKMSSYAFFVQNSREEHKKKHPDSSVDFSEFSKQCSERWKAMTPKDKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K+ Y++ M Y
Sbjct: 62 DLAKNDKVRYDREMRNY 78
>gi|71019847|ref|XP_760154.1| hypothetical protein UM04007.1 [Ustilago maydis 521]
gi|46099871|gb|EAK85104.1| hypothetical protein UM04007.1 [Ustilago maydis 521]
Length = 286
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 45/75 (60%), Gaps = 4/75 (5%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
+DP KPKRP SAFF FL + R + PN+ S K GGE+WK ++ +KAP+E +A
Sbjct: 209 RDPAKPKRPNSAFFEFLNDLR-ASEAVIPNITEFS---KRGGERWKQMSAEQKAPYEQRA 264
Query: 111 AKRKLDYEKLMTAYN 125
+ Y++ + YN
Sbjct: 265 LQALEQYKRDLELYN 279
>gi|392876202|gb|AFM86933.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 58 RPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKLDY 117
RPPSAFF+F + R + E+P + ++ V K GE W LT +K P+E + A+ K Y
Sbjct: 96 RPPSAFFIFCSDHRPRIRGENPGI-SIGDVAKKMGELWSGLTAKDKKPYEERGAQLKEKY 154
Query: 118 EKLMTAY 124
EK + AY
Sbjct: 155 EKEVAAY 161
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K+DP +P+ S++ F++ R+ +K++HP+ S K E+WK++T +K FE
Sbjct: 2 GKRDPRQPRGKMSSYAFFVQNSREEHKKKHPDSSVDFSEFSKQRSERWKAMTPKDKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K+ Y++ M Y
Sbjct: 62 DLAKNDKVRYDREMRNY 78
>gi|47497872|dbj|BAD20056.1| putative embryogenic callus protein 98b [Oryza sativa Japonica
Group]
gi|50252043|dbj|BAD27975.1| putative embryogenic callus protein 98b [Oryza sativa Japonica
Group]
gi|125581537|gb|EAZ22468.1| hypothetical protein OsJ_06136 [Oryza sativa Japonica Group]
Length = 504
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 46/70 (65%), Gaps = 3/70 (4%)
Query: 58 RPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKLDY 117
+P SA+FV+ ++ R E NV +G+ GE+WK++++AEKAPFEA A K++ +Y
Sbjct: 287 QPMSAYFVYTQQRRAALVAEKKNV---PEIGRITGEEWKAMSEAEKAPFEAAARKQREEY 343
Query: 118 EKLMTAYNKK 127
+ M AY ++
Sbjct: 344 QVEMAAYRQR 353
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN+PK+P S+F +F +E R+ +E P V A S + KWK L +AEK + KAA
Sbjct: 410 DPNRPKKPASSFLLFSKEARRQLAEERPGV-ASSTLTALVSVKWKELGEAEKQAWNGKAA 468
Query: 112 KRKLDYEKLMTAYNK 126
+ Y++ M Y K
Sbjct: 469 EAMAAYKRDMEEYTK 483
>gi|125538867|gb|EAY85262.1| hypothetical protein OsI_06634 [Oryza sativa Indica Group]
Length = 504
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 46/70 (65%), Gaps = 3/70 (4%)
Query: 58 RPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKLDY 117
+P SA+FV+ ++ R E NV +G+ GE+WK++++AEKAPFEA A K++ +Y
Sbjct: 287 QPMSAYFVYTQQRRAALVAEKKNV---PEIGRITGEEWKAMSEAEKAPFEAAARKQREEY 343
Query: 118 EKLMTAYNKK 127
+ M AY ++
Sbjct: 344 QVEMAAYRQR 353
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN+PK+P S+F +F +E R+ +E P V A S + KWK L +AEK + KAA
Sbjct: 410 DPNRPKKPASSFLLFSKEARRQLAEERPGV-ASSTLTALVSVKWKELGEAEKQAWNGKAA 468
Query: 112 KRKLDYEKLMTAYNK 126
+ Y++ M Y K
Sbjct: 469 EAMAAYKRDMEEYTK 483
>gi|410351023|gb|JAA42115.1| structure specific recognition protein 1 [Pan troglodytes]
Length = 712
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 51/88 (57%), Gaps = 2/88 (2%)
Query: 37 RSSNKRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWK 96
R S K+ VK K DPN PKRP SA+ ++L R+ K +HP + +++ + K GE WK
Sbjct: 532 RKSRKKPVEVKKGK-DPNAPKRPMSAYMLWLNASREKIKSDHPGI-SITDLSKKAGEIWK 589
Query: 97 SLTDAEKAPFEAKAAKRKLDYEKLMTAY 124
++ +K ++ KA + DYEK M Y
Sbjct: 590 GMSKEKKEEWDRKAEDARRDYEKAMKEY 617
>gi|392881066|gb|AFM89365.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 58 RPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKLDY 117
RPPSAFF+F + R + E+P + ++ V K GE W LT +K P+E + A+ K Y
Sbjct: 96 RPPSAFFIFCSDHRPRIRGENPGI-SIGDVAKKMGELWSGLTAKDKKPYEERGAQLKEKY 154
Query: 118 EKLMTAY 124
EK + AY
Sbjct: 155 EKEVAAY 161
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K+DP +P+ S++ F++ R+ +K++HP+ S K E+WK++T +K FE
Sbjct: 2 GKRDPRQPRGKMSSYAFFVQNSREEHKKKHPDSSVDFSEFSKQCSERWKAMTPKDKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K+ Y++ M Y
Sbjct: 62 DLAKNDKVRYDREMRNY 78
>gi|392883584|gb|AFM90624.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 58 RPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKLDY 117
RPPSAFF+F + R + E+P + ++ V K GE W LT +K P+E + A+ K Y
Sbjct: 96 RPPSAFFIFCSDHRPRIRGENPGI-SIGDVAKKMGELWSGLTAKDKKPYEERGAQLKEKY 154
Query: 118 EKLMTAY 124
EK + AY
Sbjct: 155 EKEVAAY 161
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K+DP +P+ S++ F++ R+ +K++HP+ S K E+WK++T +K FE
Sbjct: 2 GKRDPRQPRGKMSSYAFFVQNSREEHKKKHPDSSVDFSEFSKQCPERWKAMTPKDKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K+ Y++ M Y
Sbjct: 62 DLAKNDKVRYDREMRNY 78
>gi|410057780|ref|XP_003954279.1| PREDICTED: LOW QUALITY PROTEIN: FACT complex subunit SSRP1 [Pan
troglodytes]
Length = 709
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 51/88 (57%), Gaps = 2/88 (2%)
Query: 37 RSSNKRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWK 96
R S K+ VK K DPN PKRP SA+ ++L R+ K +HP + +++ + K GE WK
Sbjct: 529 RKSRKKPVEVKKGK-DPNAPKRPMSAYMLWLNASREKIKSDHPGI-SITDLSKKAGEIWK 586
Query: 97 SLTDAEKAPFEAKAAKRKLDYEKLMTAY 124
++ +K ++ KA + DYEK M Y
Sbjct: 587 GMSKEKKEEWDRKAEDARRDYEKAMKEY 614
>gi|195154370|ref|XP_002018095.1| GL16947 [Drosophila persimilis]
gi|194113891|gb|EDW35934.1| GL16947 [Drosophila persimilis]
Length = 111
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 46/66 (69%), Gaps = 3/66 (4%)
Query: 54 NKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKR 113
+KPKRP SA+ ++L R+ K+E P +K V+ V K GGE W+++ D K+ +EAKAAK
Sbjct: 3 DKPKRPLSAYMLWLNSAREGIKRESPGIK-VTEVAKRGGELWRAMKD--KSEWEAKAAKA 59
Query: 114 KLDYEK 119
K DY++
Sbjct: 60 KDDYDR 65
>gi|392883682|gb|AFM90673.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 58 RPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKLDY 117
RPPSAFF+F + R + E+P + ++ V K GE W LT +K P+E + A+ K Y
Sbjct: 96 RPPSAFFIFCSDHRPRIRGENPGI-SIGDVAKKMGELWSGLTAKDKKPYEERGAQLKEKY 154
Query: 118 EKLMTAY 124
EK + AY
Sbjct: 155 EKEVAAY 161
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K+DP +P+ S++ F++ R+ +K++HP+ S K E+WK++T +K FE
Sbjct: 2 GKRDPRQPRGKMSSYAFFVQNSREEHKKKHPDSSVDFSEFSKQCSERWKAMTPKDKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K+ Y++ M Y
Sbjct: 62 DLAKNDKVRYDREMRNY 78
>gi|351712970|gb|EHB15889.1| FACT complex subunit SSRP1 [Heterocephalus glaber]
Length = 677
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/98 (32%), Positives = 56/98 (57%), Gaps = 2/98 (2%)
Query: 29 RKAVLKASRSSNKRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVG 88
+KA + +K+T VK K DP+ P++P SA+ ++L R++ K EHP + +++ +
Sbjct: 520 KKAKMAKDPKGHKKTVEVKKGK-DPSVPEQPLSAYVLWLNASREMIKSEHPGI-SIANLS 577
Query: 89 KAGGEKWKSLTDAEKAPFEAKAAKRKLDYEKLMTAYNK 126
K GE WK ++ K + KA +L+YEK + Y +
Sbjct: 578 KKAGEIWKGMSKTMKEEWGHKAEDVRLEYEKAVKEYER 615
>gi|449501868|ref|XP_004174468.1| PREDICTED: LOW QUALITY PROTEIN: FACT complex subunit SSRP1
[Taeniopygia guttata]
Length = 705
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRP SA+ ++L R+ K +HP + +++ + K GE WK+++ +K ++ KA
Sbjct: 540 KDPNAPKRPMSAYMLWLNANREKIKSDHPGI-SITDLSKKAGELWKAMSKEKKEEWDRKA 598
Query: 111 AKRKLDYEKLMTAYN 125
+ DYEK M Y+
Sbjct: 599 EDARRDYEKAMKEYS 613
>gi|224058355|ref|XP_002299486.1| high mobility group family [Populus trichocarpa]
gi|222846744|gb|EEE84291.1| high mobility group family [Populus trichocarpa]
Length = 498
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DP KPK P SAFF+F E R E+ NV V K GE+WK++T+ +K P+E A
Sbjct: 295 DPLKPKHPLSAFFLFSNERRAALLAENKNV---LEVAKIAGEEWKNMTEKQKRPYEEIAK 351
Query: 112 KRKLDYEKLMTAY 124
K K Y + M AY
Sbjct: 352 KNKEKYTQEMEAY 364
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPNKPK+P S+F +F +E RK EHP + + S + KWK L EK + KAA
Sbjct: 420 DPNKPKKPASSFLLFSKETRKSLVHEHPGINS-STLTAMISVKWKELIQEEKQIWNCKAA 478
Query: 112 KRKLDYEKLMTAYNK 126
+ Y+K + Y+K
Sbjct: 479 EAMEAYKKELEEYHK 493
Score = 35.4 bits (80), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 54 NKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKR 113
N+ KRP + ++ ++ K+E+P+ + + G KWK++T EK P+E K
Sbjct: 178 NEIKRPCPPYSLWCKDQWNEVKKENPDAE-FKDISHILGAKWKTITAEEKKPYEEKYQVE 236
Query: 114 KLDYEKLMT 122
K Y KLMT
Sbjct: 237 KEAYLKLMT 245
>gi|19114226|ref|NP_593314.1| High-mobility group non-histone chromatin protein (predicted)
[Schizosaccharomyces pombe 972h-]
gi|74627097|sp|P87057.1|NHP6_SCHPO RecName: Full=Non-histone chromosomal protein 6
gi|2058376|emb|CAB08172.1| High-mobility group non-histone chromatin protein (predicted)
[Schizosaccharomyces pombe]
Length = 108
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 48 SAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFE 107
S KKDPN PKR SAF F E R+ K ++P+ +G G++WK LT E+ P+E
Sbjct: 8 SRKKDPNTPKRNMSAFMFFSIENREKMKTDNPDA-TFGQLGSLLGKRWKELTSTEREPYE 66
Query: 108 AKAAKRKLDYEKLMTAYNKK 127
KA + K YE+ Y+ K
Sbjct: 67 EKARQDKERYERERKEYDTK 86
>gi|339715208|ref|NP_001092721.2| high-mobility group box 1b [Danio rerio]
Length = 197
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F ++R K E+P + ++ + K GE W S + K P+E KA
Sbjct: 89 KDPNAPKRPPSAFFIFCGDYRPKIKGENPGL-SIGDIAKKLGEMWNSSSAEVKQPYEKKA 147
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K Y+K + Y K
Sbjct: 148 AKLKEKYDKDIALYRTK 164
Score = 45.1 bits (105), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFEAK 109
KDP KP+ S++ F++ R+ +K++HP S K E+WK+++ EK FE
Sbjct: 3 KDPRKPRGKMSSYAYFVQTCREEHKKKHPEASVNFSEFSKKCSERWKTMSAKEKGKFEDM 62
Query: 110 AAKRKLDYEKLMTAY 124
A + K+ YE+ M Y
Sbjct: 63 AKQDKVRYEREMKNY 77
>gi|241954210|ref|XP_002419826.1| high-mobility group non-histone chromosomal protein, putative
[Candida dubliniensis CD36]
gi|223643167|emb|CAX42041.1| high-mobility group non-histone chromosomal protein, putative
[Candida dubliniensis CD36]
Length = 92
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DP+ PKR SA+ F E R + + E+P + + VGK GEKWK+L +K P+E KA
Sbjct: 15 DPDAPKRSLSAYMFFANENRDIVRAENPGI-SFGQVGKLLGEKWKALNSEDKLPYENKAE 73
Query: 112 KRKLDYEKLMTAYNKKQ 128
K YEK Y KK
Sbjct: 74 ADKKRYEKEKAEYAKKN 90
>gi|60552474|gb|AAH91486.1| SSRP1 protein, partial [Homo sapiens]
Length = 633
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 51/88 (57%), Gaps = 2/88 (2%)
Query: 37 RSSNKRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWK 96
R S K+ VK K DPN PKRP SA+ ++L R+ K +HP + +++ + K GE WK
Sbjct: 529 RKSRKKPVEVKKGK-DPNAPKRPMSAYMLWLNASREKIKSDHPGI-SITDLSKKAGEIWK 586
Query: 97 SLTDAEKAPFEAKAAKRKLDYEKLMTAY 124
++ +K ++ KA + DYEK M Y
Sbjct: 587 GMSKEKKEEWDRKAEDARRDYEKAMKEY 614
>gi|395830755|ref|XP_003788484.1| PREDICTED: high mobility group protein B1-like [Otolemur garnettii]
Length = 135
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN P RPPSAFF+F E+ K EHP + ++ V K GE W +K P+E KA
Sbjct: 16 KDPNAPNRPPSAFFLFCSEYHPEIKGEHPGL-SIGDVAKKLGEMWNYTAVDDKQPYEKKA 74
Query: 111 AKRKLDYEKLMTA 123
AK K YEK + A
Sbjct: 75 AKLKEKYEKDIAA 87
>gi|297688746|ref|XP_002821837.1| PREDICTED: FACT complex subunit SSRP1 isoform 2 [Pongo abelii]
Length = 709
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRP SA+ ++L R+ K +HP + +++ + K GE WK ++ +K ++ KA
Sbjct: 542 KDPNAPKRPMSAYMLWLNASREKIKSDHPGI-SITDLSKKAGEIWKGMSKEKKEEWDRKA 600
Query: 111 AKRKLDYEKLMTAY 124
+ DYEK M Y
Sbjct: 601 EDARRDYEKAMKEY 614
>gi|4507241|ref|NP_003137.1| FACT complex subunit SSRP1 [Homo sapiens]
gi|397512296|ref|XP_003826485.1| PREDICTED: FACT complex subunit SSRP1 [Pan paniscus]
gi|426368405|ref|XP_004051198.1| PREDICTED: FACT complex subunit SSRP1 [Gorilla gorilla gorilla]
gi|730840|sp|Q08945.1|SSRP1_HUMAN RecName: Full=FACT complex subunit SSRP1; AltName:
Full=Chromatin-specific transcription elongation factor
80 kDa subunit; AltName: Full=Facilitates chromatin
transcription complex 80 kDa subunit; Short=FACT 80 kDa
subunit; Short=FACTp80; AltName: Full=Facilitates
chromatin transcription complex subunit SSRP1; AltName:
Full=Recombination signal sequence recognition protein
1; AltName: Full=Structure-specific recognition protein
1; Short=hSSRP1; AltName: Full=T160
gi|184242|gb|AAA58660.1| high mobility group box [Homo sapiens]
gi|13477285|gb|AAH05116.1| Structure specific recognition protein 1 [Homo sapiens]
gi|119594140|gb|EAW73734.1| structure specific recognition protein 1, isoform CRA_a [Homo
sapiens]
gi|119594141|gb|EAW73735.1| structure specific recognition protein 1, isoform CRA_a [Homo
sapiens]
gi|123993967|gb|ABM84585.1| structure specific recognition protein 1 [synthetic construct]
gi|123998313|gb|ABM86758.1| structure specific recognition protein 1 [synthetic construct]
gi|410226712|gb|JAA10575.1| structure specific recognition protein 1 [Pan troglodytes]
gi|410226714|gb|JAA10576.1| structure specific recognition protein 1 [Pan troglodytes]
gi|410262712|gb|JAA19322.1| structure specific recognition protein 1 [Pan troglodytes]
gi|410262714|gb|JAA19323.1| structure specific recognition protein 1 [Pan troglodytes]
gi|410305268|gb|JAA31234.1| structure specific recognition protein 1 [Pan troglodytes]
gi|410305270|gb|JAA31235.1| structure specific recognition protein 1 [Pan troglodytes]
gi|410351021|gb|JAA42114.1| structure specific recognition protein 1 [Pan troglodytes]
gi|410351025|gb|JAA42116.1| structure specific recognition protein 1 [Pan troglodytes]
Length = 709
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 51/88 (57%), Gaps = 2/88 (2%)
Query: 37 RSSNKRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWK 96
R S K+ VK K DPN PKRP SA+ ++L R+ K +HP + +++ + K GE WK
Sbjct: 529 RKSRKKPVEVKKGK-DPNAPKRPMSAYMLWLNASREKIKSDHPGI-SITDLSKKAGEIWK 586
Query: 97 SLTDAEKAPFEAKAAKRKLDYEKLMTAY 124
++ +K ++ KA + DYEK M Y
Sbjct: 587 GMSKEKKEEWDRKAEDARRDYEKAMKEY 614
>gi|343425092|emb|CBQ68629.1| conserved hypothetical protein [Sporisorium reilianum SRZ2]
Length = 290
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 45/75 (60%), Gaps = 4/75 (5%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
+DP KPKRP SAFF FL + R + PN+ S K GGE+WK ++ +KAP+E +A
Sbjct: 213 RDPAKPKRPNSAFFEFLNDLR-ASEAVIPNITEFS---KRGGERWKQMSAEQKAPYEQRA 268
Query: 111 AKRKLDYEKLMTAYN 125
+ Y++ + YN
Sbjct: 269 LQALEQYKRDLEIYN 283
>gi|186701221|gb|ACC91248.1| high mobility group HMG1/2 family protein [Arabidopsis halleri]
Length = 456
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DP KPK P SAF V+ E R +++ K+V V K GE+WK+L+D +KAP+E A
Sbjct: 251 DPLKPKHPVSAFLVYANERRAALREDS---KSVVEVAKITGEEWKNLSDKKKAPYEEVAK 307
Query: 112 KRKLDYEKLMTAY 124
K K Y + M Y
Sbjct: 308 KNKETYLQAMEEY 320
Score = 52.4 bits (124), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPNKPK+P S++F+F ++ RK +E P S V KWK L + EK + KAA
Sbjct: 375 DPNKPKKPASSYFLFSKDERKRLIEERPGTNN-STVTALISVKWKELGEEEKQVYNKKAA 433
Query: 112 KRKLDYEKLMTAYNKK 127
K Y+K + AYNKK
Sbjct: 434 KLMEAYKKEVEAYNKK 449
>gi|242389922|dbj|BAH80451.1| putative HMG1 protein [Lentinula edodes]
Length = 560
Score = 57.0 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 41/106 (38%), Positives = 60/106 (56%), Gaps = 13/106 (12%)
Query: 28 KRKAVLKASRSSNKRTKNVKSAKKDPNKPKRPPSAFFVFLEEFR-------KVYKQEHPN 80
KR+ V +A++ K K+ KS KDPN PK+P SA+F+FL+ R KV+ E
Sbjct: 418 KRENVFRAAQ--RKAGKSRKSNIKDPNAPKKPLSAYFMFLQRIRANPQLVQKVFGDETET 475
Query: 81 VKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKLDYEKLMTAYNK 126
K S + A KW+S+TD E+ PF A+A + K++YE Y +
Sbjct: 476 TKQ-SVLAAA---KWRSMTDDERKPFLAQAEQEKMEYEAARRLYEE 517
>gi|195123163|ref|XP_002006078.1| GI18750 [Drosophila mojavensis]
gi|193911146|gb|EDW10013.1| GI18750 [Drosophila mojavensis]
Length = 734
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 46/73 (63%), Gaps = 3/73 (4%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
D NKPKRP +AF ++L E R+ K+++P +K V+ + K GGE WK L D K+ +E A+
Sbjct: 557 DSNKPKRPTTAFMLWLSETREQIKRDNPGIK-VTEIAKKGGEMWKELKD--KSKWEELAS 613
Query: 112 KRKLDYEKLMTAY 124
K K Y+ M Y
Sbjct: 614 KDKQRYQDAMRNY 626
>gi|389585513|dbj|GAB68243.1| high mobility group protein [Plasmodium cynomolgi strain B]
Length = 107
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 49/87 (56%), Gaps = 5/87 (5%)
Query: 41 KRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNV-KAVSAVGKAGGEKWKSLT 99
KR KN KKDP+ PKR SA+ F +E R P++ K V+ VGK GE W L
Sbjct: 20 KRRKN----KKDPHAPKRSLSAYMFFAKEKRAEIISRDPDLSKDVATVGKMIGEAWNKLD 75
Query: 100 DAEKAPFEAKAAKRKLDYEKLMTAYNK 126
+ EKAP+E KA + K+ YE+ Y K
Sbjct: 76 ELEKAPYEKKAQEDKVRYEREKVEYAK 102
>gi|332252411|ref|XP_003275348.1| PREDICTED: FACT complex subunit SSRP1 [Nomascus leucogenys]
Length = 709
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 51/88 (57%), Gaps = 2/88 (2%)
Query: 37 RSSNKRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWK 96
R S K+ VK K DPN PKRP SA+ ++L R+ K +HP + +++ + K GE WK
Sbjct: 529 RKSRKKPVEVKKGK-DPNAPKRPMSAYMLWLNASREKIKSDHPGI-SITDLSKKAGEIWK 586
Query: 97 SLTDAEKAPFEAKAAKRKLDYEKLMTAY 124
++ +K ++ KA + DYEK M Y
Sbjct: 587 GMSKEKKEEWDRKAEDARRDYEKAMKEY 614
>gi|74638955|sp|Q9UVL1.1|NHP6_CANAL RecName: Full=Non-histone chromosomal protein 6
gi|6273391|gb|AAF06350.1|AF196333_1 nonhistone protein 6 [Candida albicans]
gi|238881668|gb|EEQ45306.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 92
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DP+ PKR SA+ F E R + + E+P + + VGK GEKWK+L +K P+E KA
Sbjct: 15 DPDAPKRSLSAYMFFANENRDIVRAENPGI-SFGQVGKLLGEKWKALNSEDKLPYENKAE 73
Query: 112 KRKLDYEKLMTAYNKKQ 128
K YEK Y KK
Sbjct: 74 ADKKRYEKEKAEYAKKN 90
>gi|148703464|gb|EDL35411.1| mCG50005 [Mus musculus]
Length = 206
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPF 106
DPN PKRPPSAFF+F E+R K EHP + ++ V K GE W + +K P+
Sbjct: 91 DPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAAKDKQPY 144
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DP KP+ S++ +F++ + +K++HP+ S K E+W +++ EK FE
Sbjct: 2 GKGDPKKPRGKMSSYALFVKTCWEEHKKKHPDASVNFSGFSKKCSERWNTMSAKEKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K YE+ M Y
Sbjct: 62 GMAKADKARYEREMKTY 78
>gi|392883678|gb|AFM90671.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 58 RPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKLDY 117
RPPSAFF+F + R + E+P + ++ V K GE W LT +K P+E + A+ K Y
Sbjct: 96 RPPSAFFIFCSDHRPRIRGENPGI-SIGDVAKKMGELWSGLTAKDKKPYEERGAQLKEKY 154
Query: 118 EKLMTAY 124
EK + AY
Sbjct: 155 EKEVAAY 161
Score = 41.6 bits (96), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K+DP +P+ ++ F++ R+ +K++HP+ S K E+WK++T +K FE
Sbjct: 2 GKRDPRQPRGKMFSYAFFVQNSREEHKKKHPDSSVDFSEFSKQCSERWKAMTPKDKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K+ Y++ M Y
Sbjct: 62 DLAKNDKVRYDREMRNY 78
>gi|302755040|ref|XP_002960944.1| hypothetical protein SELMODRAFT_73858 [Selaginella moellendorffii]
gi|300171883|gb|EFJ38483.1| hypothetical protein SELMODRAFT_73858 [Selaginella moellendorffii]
Length = 457
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 45/78 (57%), Gaps = 3/78 (3%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
+KDP KPKRP + + + EE R E N+K V +GK GE+W+S+ + +AP+E
Sbjct: 244 EKDPEKPKRPTTGYMAYSEERRPALMNE--NLK-VPQIGKILGEEWRSMDEKARAPYEKI 300
Query: 110 AAKRKLDYEKLMTAYNKK 127
A K Y M AYNKK
Sbjct: 301 ATDAKATYLTEMEAYNKK 318
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 48/79 (60%), Gaps = 5/79 (6%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPN--VKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
DP + K+P S++F++ + R+ + ++PN +K +S++ GE WKS+++ EK P+E
Sbjct: 126 DPERIKKPLSSYFLWCNDQREKVRAQNPNAGIKELSSIF---GELWKSVSEEEKKPYEEI 182
Query: 110 AAKRKLDYEKLMTAYNKKQ 128
K K +Y K + K++
Sbjct: 183 YQKNKEEYLKQLVGKEKRE 201
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
+P KPK+ +A+ +F E+RK + E P K KW + EK P+ +A
Sbjct: 370 EPGKPKKAATAYILFGMEYRKKLQAEMPTAKFAELTALVAS-KWNEMGAEEKQPYVNQAG 428
Query: 112 KRKLDYEKLMTAY 124
KL Y++ M +
Sbjct: 429 VEKLKYQEAMEEF 441
>gi|47551063|ref|NP_999708.1| high mobility group protein 1 homolog [Strongylocentrotus
purpuratus]
gi|729735|sp|P40644.1|HMGH_STRPU RecName: Full=High mobility group protein 1 homolog
gi|161521|gb|AAA91277.1| high mobility group 1 protein [Strongylocentrotus purpuratus]
Length = 200
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DP+ PKR SAFF+F E R K HPN +V + K +W+++T EK PF+ AA
Sbjct: 96 DPDAPKRNLSAFFIFSGENRAAIKSVHPNW-SVGDIAKELAVRWRAMTAGEKIPFDKGAA 154
Query: 112 KRKLDYEKLMTAYNKK 127
K K Y K M Y K
Sbjct: 155 KDKERYIKAMAEYKAK 170
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFEAK 109
+D +KP+ SA+ F+++ R + + HPN + K +WK+L + K F K
Sbjct: 6 RDSSKPRGRMSAYAYFVQDSRAEHGKNHPNSPVRFAEFSKDCSARWKALEEKGKGVFHEK 65
Query: 110 AAKRKLDYEKLMTAY 124
+ + K+ Y++ M +Y
Sbjct: 66 SMRDKVRYDREMQSY 80
>gi|299748049|ref|XP_001837422.2| hypothetical protein CC1G_01334 [Coprinopsis cinerea okayama7#130]
gi|298407795|gb|EAU84338.2| hypothetical protein CC1G_01334 [Coprinopsis cinerea okayama7#130]
Length = 558
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Query: 51 KDPNKPKRPPSAFFVFLEEFR---KVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFE 107
KDPN PK+P SA+F+FL+ R K+ K+ + + KW+S+TDAE+ PF
Sbjct: 436 KDPNAPKKPLSAYFMFLQRIRADPKLVKEIFGDETETTKQSVLAAAKWRSMTDAERQPFL 495
Query: 108 AKAAKRKLDYE 118
A+A + K++YE
Sbjct: 496 AQAEQEKMEYE 506
>gi|392881260|gb|AFM89462.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 58 RPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKLDY 117
RPPSAFF+F + R + E+P + ++ V K GE W LT +K P+E + A+ K Y
Sbjct: 96 RPPSAFFIFCSDHRPRIRGENPGI-SIGDVTKKMGELWSGLTAKDKKPYEERGAQLKEKY 154
Query: 118 EKLMTAY 124
EK + AY
Sbjct: 155 EKEVAAY 161
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K+DP +P+ S++ F++ R+ +K++HP+ S K E+WK++T +K FE
Sbjct: 2 GKRDPRQPRGKMSSYAFFVQNSREEHKKKHPDSSVDFSEFSKQCSERWKAMTPKDKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K+ Y++ M Y
Sbjct: 62 DLAKNDKVRYDREMRNY 78
>gi|222619008|gb|EEE55140.1| hypothetical protein OsJ_02931 [Oryza sativa Japonica Group]
Length = 157
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 43/60 (71%)
Query: 68 EEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKLDYEKLMTAYNKK 127
E+FRK YK+E+P+VK++ VGKA GEKW ++T E+ + A +++ +YEK + ++KK
Sbjct: 85 EDFRKTYKEENPSVKSMQEVGKACGEKWNTMTFEERVKYYDIATEKRAEYEKAVAEFDKK 144
>gi|195025405|ref|XP_001986052.1| GH21151 [Drosophila grimshawi]
gi|193902052|gb|EDW00919.1| GH21151 [Drosophila grimshawi]
Length = 744
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 48/75 (64%), Gaps = 3/75 (4%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
KKD NKPKRP +AF ++L + R+ K+++P +K V+ + K GGE WK L D K+ ++
Sbjct: 554 KKDSNKPKRPTTAFMLWLNDTREQIKRDNPGIK-VTEIAKKGGEMWKELKD--KSKWDEA 610
Query: 110 AAKRKLDYEKLMTAY 124
A+K K Y+ M Y
Sbjct: 611 ASKDKQRYQDEMRNY 625
>gi|345320167|ref|XP_001521836.2| PREDICTED: FACT complex subunit SSRP1-like, partial
[Ornithorhynchus anatinus]
Length = 295
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRP SA+ ++L R+ K +HP + +++ + K GE WK +T +K ++ KA
Sbjct: 122 KDPNAPKRPMSAYMLWLNASREKIKADHPGI-SITDLSKKAGEIWKGMTKEKKEEWDRKA 180
Query: 111 AKRKLDYEKLMTAYNK 126
+ K +YEK M Y++
Sbjct: 181 EEAKREYEKAMKEYSE 196
>gi|115445389|ref|NP_001046474.1| Os02g0258200 [Oryza sativa Japonica Group]
gi|113536005|dbj|BAF08388.1| Os02g0258200, partial [Oryza sativa Japonica Group]
Length = 269
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 46/70 (65%), Gaps = 3/70 (4%)
Query: 58 RPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKLDY 117
+P SA+FV+ ++ R E NV +G+ GE+WK++++AEKAPFEA A K++ +Y
Sbjct: 52 QPMSAYFVYTQQRRAALVAEKKNV---PEIGRITGEEWKAMSEAEKAPFEAAARKQREEY 108
Query: 118 EKLMTAYNKK 127
+ M AY ++
Sbjct: 109 QVEMAAYRQR 118
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN+PK+P S+F +F +E R+ +E P V A S + KWK L +AEK + KAA
Sbjct: 175 DPNRPKKPASSFLLFSKEARRQLAEERPGV-ASSTLTALVSVKWKELGEAEKQAWNGKAA 233
Query: 112 KRKLDYEKLMTAYNK 126
+ Y++ M Y K
Sbjct: 234 EAMAAYKRDMEEYTK 248
>gi|221059780|ref|XP_002260535.1| High mobility group protein [Plasmodium knowlesi strain H]
gi|193810609|emb|CAQ42507.1| High mobility group protein, putative [Plasmodium knowlesi strain
H]
Length = 104
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 49/87 (56%), Gaps = 5/87 (5%)
Query: 41 KRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNV-KAVSAVGKAGGEKWKSLT 99
KR KN KKDP+ PKR SA+ F +E R P++ K V+ VGK GE W L
Sbjct: 17 KRRKN----KKDPHAPKRSLSAYMFFAKEKRAEIISRDPDLSKDVATVGKMIGEAWNKLD 72
Query: 100 DAEKAPFEAKAAKRKLDYEKLMTAYNK 126
+ EKAP+E KA + K+ YE+ Y K
Sbjct: 73 EREKAPYEKKAQEDKVRYEREKVEYAK 99
>gi|149236976|ref|XP_001524365.1| hypothetical protein LELG_04337 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146451900|gb|EDK46156.1| hypothetical protein LELG_04337 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 93
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DP+ PKR SA+ F E R + + E+P + VGK GEKWK+L +K P+E KA
Sbjct: 16 DPDAPKRSLSAYMFFANENRDIVRAENPGI-TFGQVGKLLGEKWKALGSEDKVPYENKAE 74
Query: 112 KRKLDYEKLMTAYNKKQ 128
K YEK Y KK
Sbjct: 75 ADKKRYEKEKAEYAKKN 91
>gi|444729306|gb|ELW69730.1| High mobility group protein B1 [Tupaia chinensis]
Length = 160
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPP AFF+F E+ + EHP + + V K GE W + + P+E KA
Sbjct: 39 KDPNAPKRPPLAFFLFCSEYHPKIRGEHPGL-YIGDVAKKLGEMWTNTAADDTQPYEKKA 97
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + AY K
Sbjct: 98 AKLKEKYEKDIAAYRAK 114
>gi|345807806|ref|XP_003435667.1| PREDICTED: high mobility group protein B1-like [Canis lupus
familiaris]
Length = 135
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN KRPPS FF+F E+R K E+P + ++ V K GE W + EK P+E KA
Sbjct: 16 KDPNALKRPPSFFFLFCSEYRPKIKGEYPGL-SIGDVAKNLGEMWNNTAADEKQPYEKKA 74
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K YEK + AY K
Sbjct: 75 AKLKEKYEKDIAAYRAK 91
>gi|183014156|dbj|BAG24407.1| hypothetical protein [Coprinopsis cinerea]
Length = 558
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Query: 51 KDPNKPKRPPSAFFVFLEEFR---KVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFE 107
KDPN PK+P SA+F+FL+ R K+ K+ + + KW+S+TDAE+ PF
Sbjct: 436 KDPNAPKKPLSAYFMFLQRIRADPKLVKEIFGDETETTKQSVLAAAKWRSMTDAERQPFL 495
Query: 108 AKAAKRKLDYE 118
A+A + K++YE
Sbjct: 496 AQAEQEKMEYE 506
>gi|255087726|ref|XP_002505786.1| histone chaperone [Micromonas sp. RCC299]
gi|226521056|gb|ACO67044.1| histone chaperone [Micromonas sp. RCC299]
Length = 643
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN+PKRP SAF +F +E R +++P+ A+ VGK G +W+ + K FEAKAA
Sbjct: 547 DPNEPKRPLSAFMIFSKETRGDVLEKNPDF-ALGDVGKELGRRWREIDPELKKEFEAKAA 605
Query: 112 KRKLDYEKLMTAY 124
K+ YE M Y
Sbjct: 606 DAKVAYEAAMKEY 618
>gi|327260386|ref|XP_003215015.1| PREDICTED: FACT complex subunit SSRP1-like [Anolis carolinensis]
Length = 705
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRP SA+ ++L R + E P + +V+ V K GE WK+++ +K ++ KA
Sbjct: 540 KDPNAPKRPLSAYMLWLNANRDKIRSESPGM-SVTDVSKKAGELWKAMSKEKKEEWDRKA 598
Query: 111 AKRKLDYEKLMTAYNK 126
K DYEK M YN+
Sbjct: 599 EDAKRDYEKAMKEYNE 614
>gi|403419540|emb|CCM06240.1| predicted protein [Fibroporia radiculosa]
Length = 763
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 55/92 (59%), Gaps = 12/92 (13%)
Query: 35 ASRSSNKRT-KNVKSAKKDPNKPKRPPSAFFVFLEEFR-------KVYKQEHPNVKAVSA 86
A R++ +R K+ K KDPN PK+P SA+F+FL+ R +V+ E K +
Sbjct: 612 AFRTAQRRAGKSRKGNIKDPNAPKKPLSAYFMFLQRIRSDPELVKEVFGDESETTK--QS 669
Query: 87 VGKAGGEKWKSLTDAEKAPFEAKAAKRKLDYE 118
V AG KW+S+TD E+ PF A+A + KL+YE
Sbjct: 670 VLAAG--KWRSMTDEERKPFLAQAEQEKLEYE 699
>gi|346468357|gb|AEO34023.1| hypothetical protein [Amblyomma maculatum]
Length = 734
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 50/75 (66%), Gaps = 3/75 (4%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
++D NKPKRPPSA+F++L E R K+++P+ +++ V K GE WK +TD K+ +E +
Sbjct: 555 ERDANKPKRPPSAYFLWLAENRDKIKKDNPSF-SITDVTKRAGELWKEVTD--KSKWEQQ 611
Query: 110 AAKRKLDYEKLMTAY 124
A + Y++ M AY
Sbjct: 612 AVEAAAKYKEAMAAY 626
>gi|213407940|ref|XP_002174741.1| predicted protein [Schizosaccharomyces japonicus yFS275]
gi|212002788|gb|EEB08448.1| predicted protein [Schizosaccharomyces japonicus yFS275]
Length = 134
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 47 KSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPF 106
K+ +KDPN PKR SAF F R+ K+E+P +G G+KWK+LT EK P+
Sbjct: 7 KTRRKDPNAPKRNMSAFMFFSMSNREKIKEENPEA-TFGQIGSLLGKKWKTLTAVEKEPY 65
Query: 107 EAKAAKRKLDYEK 119
E KA K K YE+
Sbjct: 66 EEKARKDKERYER 78
>gi|307568341|pdb|3NM9|A Chain A, Hmgd(M13a)-Dna Complex
gi|307568342|pdb|3NM9|D Chain D, Hmgd(M13a)-Dna Complex
gi|307568343|pdb|3NM9|G Chain G, Hmgd(M13a)-Dna Complex
gi|307568344|pdb|3NM9|J Chain J, Hmgd(M13a)-Dna Complex
gi|307568345|pdb|3NM9|M Chain M, Hmgd(M13a)-Dna Complex
gi|307568346|pdb|3NM9|P Chain P, Hmgd(M13a)-Dna Complex
Length = 73
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 49/71 (69%), Gaps = 3/71 (4%)
Query: 54 NKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKR 113
+KPKRP SA+ ++L R+ K+E+P +K V+ V K GGE W+++ D K+ +EAKAAK
Sbjct: 2 DKPKRPLSAYALWLNSARESIKRENPGIK-VTEVAKRGGELWRAMKD--KSEWEAKAAKA 58
Query: 114 KLDYEKLMTAY 124
K DY++ + +
Sbjct: 59 KDDYDRAVKEF 69
>gi|444513275|gb|ELV10301.1| High mobility group protein B1 [Tupaia chinensis]
Length = 161
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRP AFF+F E+R K EHP + ++ V K GE W + K P+E KA
Sbjct: 89 KDPNAPKRPLLAFFLFCSEYRPQIKGEHPGL-SIGDVAKKLGEMWNNTAADGKQPYEKKA 147
Query: 111 AKRKLDYEKLMTAY 124
AK K YEK + AY
Sbjct: 148 AKLKEKYEKDIAAY 161
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K +P KP+ S+ F++ F++ +K+ HP+ S K E+WK+++ EK FE
Sbjct: 2 GKGNPEKPRGKMSSNAFFVQTFQEEHKK-HPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60
Query: 108 AKAAKRKLDYEKLMTAY 124
A K YE+ M Y
Sbjct: 61 DMAKADKARYEREMKTY 77
>gi|242064692|ref|XP_002453635.1| hypothetical protein SORBIDRAFT_04g009610 [Sorghum bicolor]
gi|241933466|gb|EES06611.1| hypothetical protein SORBIDRAFT_04g009610 [Sorghum bicolor]
Length = 488
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 45/70 (64%), Gaps = 3/70 (4%)
Query: 58 RPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKLDY 117
+P SA+FV+ +E R E NV +GK GE+WK++T+A+KAP+E A K+K +Y
Sbjct: 290 QPMSAYFVYSQERRAALVAEKKNV---PEIGKITGEEWKNMTEAQKAPYEKVARKQKEEY 346
Query: 118 EKLMTAYNKK 127
+K M Y +K
Sbjct: 347 QKQMEVYKQK 356
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN+PKRP S+F +F +E RK +E P + S++ KWK L+ E+ + AKAA
Sbjct: 409 DPNRPKRPASSFLLFSKEARKQLLEERPGINN-SSLNALISVKWKELSGEERQAWNAKAA 467
Query: 112 KRKLDYEKLMTAYNKKQ 128
Y+K M Y K Q
Sbjct: 468 PAMAAYKKEMEEYTKAQ 484
>gi|392351997|ref|XP_003751090.1| PREDICTED: high mobility group protein B2-like, partial [Rattus
norvegicus]
Length = 154
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 54 NKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKR 113
N PKRPPSAFF+F E R K EHP + ++ K GE W + +K P+E KAAK
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGL-SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKL 151
Query: 114 K 114
K
Sbjct: 152 K 152
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DPNKP+ S++ F++ R+ +K++HP+ + K E+WK+++ EK+ FE
Sbjct: 2 GKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K Y++ M Y
Sbjct: 62 DLAKSDKARYDREMKNY 78
>gi|428163656|gb|EKX32716.1| FACT complex subunit ssrp1 [Guillardia theta CCMP2712]
Length = 746
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
KKDPN PKRP SA+ +F + R+ +E+P++K GK E WK+L+ EK PFE +
Sbjct: 546 KKDPNAPKRPKSAWLLFCDAKREDIVKENPDIKFTEVNGKI-SEIWKNLSSDEKKPFEEE 604
Query: 110 AAKRKLDYEKLMTAYNKK 127
AAK Y++ Y+K+
Sbjct: 605 AAKLASKYKEDKAKYDKE 622
>gi|145536343|ref|XP_001453899.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124421632|emb|CAK86502.1| unnamed protein product [Paramecium tetraurelia]
Length = 236
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 54/87 (62%), Gaps = 5/87 (5%)
Query: 43 TKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAE 102
T K ++DPN PK+P +AFF+F +++R+ + +P +K ++ + + G KW S+++ E
Sbjct: 39 TTTEKKKERDPNAPKKPLTAFFLFNQKYRQKVVERNPEIK-LTQISQMAGNKWTSMSEQE 97
Query: 103 KAPF--EAKAAKRKLDYEKLMTAYNKK 127
K P+ + AAK K D E + YN+K
Sbjct: 98 KKPYLDQYNAAKEKYDQE--LKDYNEK 122
>gi|340052816|emb|CCC47102.1| putative high mobility group protein [Trypanosoma vivax Y486]
Length = 271
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 50/84 (59%), Gaps = 5/84 (5%)
Query: 43 TKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAE 102
+++ K+ KD N PKR SAF F +EFR +HPN+ +++ KA G W+ L+D +
Sbjct: 193 SRSAKAKNKDENAPKRAVSAFMFFSKEFR----SKHPNL-SMTEGSKAAGAAWRELSDEK 247
Query: 103 KAPFEAKAAKRKLDYEKLMTAYNK 126
K P+EA A K K YEK T +K
Sbjct: 248 KKPYEAMAQKDKERYEKEKTTGSK 271
>gi|324526583|gb|ADY48692.1| High mobility group protein 1.2, partial [Ascaris suum]
Length = 248
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 47 KSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPF 106
K KKDPN PKR SAFF F + R +Q+HP K V V + G WK+L+D E+ +
Sbjct: 128 KRVKKDPNAPKRALSAFFFFSHDKRPEVQQQHPEWK-VGQVAQELGRYWKALSDEERMVY 186
Query: 107 EAKAAKRKLDYEKLMTAY 124
E KA + K Y + M Y
Sbjct: 187 ERKALEDKERYAEEMRNY 204
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 46 VKSAKKDPNKPKRPPSAFFV--FLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEK 103
++ + K P + K P FFV EE +K Y E NV+ V+ + K EKWK+++D EK
Sbjct: 41 MRESAKPPVRGKTSPYGFFVKMCYEEHKKKYPNE--NVQ-VTEISKKCSEKWKTMSDDEK 97
Query: 104 APFEAKAAKRKLDYEKLMTAYN 125
F A K Y+ + AY
Sbjct: 98 RRFFELAQKDAERYQAEVAAYG 119
>gi|413943061|gb|AFW75710.1| hypothetical protein ZEAMMB73_996127 [Zea mays]
Length = 95
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 41/53 (77%), Gaps = 1/53 (1%)
Query: 36 SRSSNKRTKNVKS-AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAV 87
S+ + K TK K+ A KDPNKPKR P+AFFV + EFRK +K+++P +K+V+AV
Sbjct: 25 SKGAEKPTKGRKAKAGKDPNKPKRAPNAFFVLMGEFRKEFKEKNPKIKSVAAV 77
>gi|156083745|ref|XP_001609356.1| high mobility group protein-like protein NHP1 [Babesia bovis T2Bo]
gi|730136|sp|P40632.1|NHP1_BABBO RecName: Full=High mobility group protein homolog NHP1
gi|344189439|pdb|2LHJ|A Chain A, Nmr Structure Of The High Mobility Group Protein-Like
Protein Nhp1 From Babesia Bovis T2bo (Baboa.00841.A)
gi|155890|gb|AAA27799.1| non-histone protein [Babesia bovis]
gi|154796607|gb|EDO05788.1| high mobility group protein-like protein NHP1 [Babesia bovis]
Length = 97
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNV-KAVSAVGKAGGEKWKSLTDAEKAPFE 107
AKKDPN PKR S++ F +E R E+P + K V+A+GK G W +L+D EK P+E
Sbjct: 16 AKKDPNAPKRALSSYMFFAKEKRVEIIAENPEIAKDVAAIGKMIGAAWNALSDEEKKPYE 75
Query: 108 AKAAKRKLDYEKLMTAYNKKQ 128
+ + ++ YE+ Y +++
Sbjct: 76 RMSDEDRVRYEREKAEYAQRK 96
>gi|405977513|gb|EKC41956.1| High mobility group protein B3 [Crassostrea gigas]
Length = 202
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 46/79 (58%), Gaps = 6/79 (7%)
Query: 51 KDPN---KPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFE 107
KDPN KPKRP SA+F FL +FR K + + K + K GE W++L D EK PFE
Sbjct: 91 KDPNDAGKPKRPQSAYFCFLADFRLKMKGKDIDHKEII---KMAGEAWRNLDDNEKKPFE 147
Query: 108 AKAAKRKLDYEKLMTAYNK 126
A K + YE+ ++ + K
Sbjct: 148 KLAQKEQEKYEQALSDWRK 166
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 38/74 (51%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN+PKR SA+F FL + R+ K+ + ++ K KW + + +K PF KA
Sbjct: 15 KDPNRPKRATSAYFFFLSKMREDSKKAGKPITKIAEFTKECSAKWAKMNEKDKEPFAKKA 74
Query: 111 AKRKLDYEKLMTAY 124
K Y+ M Y
Sbjct: 75 LTDKNRYDAEMAIY 88
>gi|3600053|gb|AAC35540.1| contains similarity to HMG (high mobility group) box (Pfam:
HMG_box.hmm, scores: 70.67, 53.09 and 80.15)
[Arabidopsis thaliana]
Length = 401
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 64/127 (50%), Gaps = 23/127 (18%)
Query: 22 EDRAA--GKRKAVLKASRSSNKRTKNVKSAKK--------------------DPNKPKRP 59
E RAA G+ K+V++ ++ + + KN+ KK DPNKPK+P
Sbjct: 271 ERRAALKGENKSVIEVAKMAGEEWKNLSEEKKAPYDQKTKETAKNKKKNENVDPNKPKKP 330
Query: 60 PSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKLDYEK 119
S++F+F ++ RK +EHP + S V KW L + EK + +KAA+ Y+K
Sbjct: 331 TSSYFLFCKDARKSVLEEHPGINN-STVTAHISLKWMELGEEEKQVYNSKAAELMEAYKK 389
Query: 120 LMTAYNK 126
+ YNK
Sbjct: 390 EVEEYNK 396
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 38/59 (64%), Gaps = 3/59 (5%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
DP KPK+P SA+ ++ E R K E+ K+V V K GE+WK+L++ +KAP++ K
Sbjct: 254 DPLKPKQPISAYLIYANERRAALKGEN---KSVIEVAKMAGEEWKNLSEEKKAPYDQKT 309
>gi|183212221|gb|ACC54773.1| high-mobility group box 1 beta [Xenopus borealis]
Length = 95
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
KDPN PKRPPSAFF+F +FR K E+P + + K GE W + +K P+E K
Sbjct: 38 KDPNAPKRPPSAFFLFCSDFRPKIKGEYPG-STIGDIAKKLGEMWNNTATDDKLPYERK 95
>gi|194752689|ref|XP_001958652.1| GF12460 [Drosophila ananassae]
gi|190619950|gb|EDV35474.1| GF12460 [Drosophila ananassae]
Length = 728
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 50/77 (64%), Gaps = 3/77 (3%)
Query: 48 SAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFE 107
S KK+ +KPKR +AF ++L + R+ K+E+P +K V+ + K GGE WK L D K+ +E
Sbjct: 547 SKKKESDKPKRATTAFMLWLNDTREKIKKENPGIK-VTEIAKKGGEMWKELKD--KSKWE 603
Query: 108 AKAAKRKLDYEKLMTAY 124
AAK KL Y++ M Y
Sbjct: 604 EAAAKDKLRYQEEMRNY 620
>gi|384251656|gb|EIE25133.1| hypothetical protein COCSUDRAFT_40465 [Coccomyxa subellipsoidea
C-169]
Length = 253
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 42/63 (66%), Gaps = 6/63 (9%)
Query: 57 KRPPSAFFVFLEEFRKVYK-----QEHPNVK-AVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KR P+AFF+F EE R+ + Q P VK +V AV KA GEKW++LTD EKA ++ K
Sbjct: 4 KRAPTAFFIFSEEQREATRAECQAQAEPRVKVSVGAVAKAIGEKWRALTDEEKASYKEKV 63
Query: 111 AKR 113
A+R
Sbjct: 64 AER 66
>gi|126333240|ref|XP_001376238.1| PREDICTED: FACT complex subunit SSRP1 [Monodelphis domestica]
Length = 712
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRP SA+ ++L R+ K +HP + +++ + K GE WK ++ +K ++ KA
Sbjct: 542 KDPNAPKRPMSAYMLWLNASREKIKSDHPGI-SITDLSKKAGEIWKGMSKEKKEEWDRKA 600
Query: 111 AKRKLDYEKLMTAYNK 126
+ K +YEK M Y++
Sbjct: 601 EEAKREYEKAMKEYSE 616
>gi|357608070|gb|EHJ65807.1| mobility group protein 1B [Danaus plexippus]
Length = 180
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 47/75 (62%), Gaps = 3/75 (4%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
K +KPKRP SA+ ++L R+ K E+P +K V+ + K GGE W+S+ D K +E KA
Sbjct: 60 KMTDKPKRPMSAYMLWLNSAREQIKSENPGLK-VTEIAKKGGEIWRSMKD--KTVWEEKA 116
Query: 111 AKRKLDYEKLMTAYN 125
AK K Y K + +YN
Sbjct: 117 AKAKEQYTKDLESYN 131
>gi|27502780|gb|AAH42502.1| Ssrp1 protein [Mus musculus]
Length = 711
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 60/105 (57%), Gaps = 4/105 (3%)
Query: 23 DRAAGKRKAVLKASRSSNKRTKNVKSA---KKDPNKPKRPPSAFFVFLEEFRKVYKQEHP 79
DR KR+ + +A + +++++ S KDPN PKRP SA+ ++L R+ K +HP
Sbjct: 511 DREEKKREQLKRAKMAKDRKSRRKSSEAKKGKDPNAPKRPMSAYMLWLNASREKIKSDHP 570
Query: 80 NVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKLDYEKLMTAY 124
+ +++ + K GE WK ++ +K ++ KA + +YEK M Y
Sbjct: 571 GI-SITDLSKKAGEIWKGMSKEKKEEWDRKAEDARREYEKAMKEY 614
>gi|389744542|gb|EIM85725.1| hypothetical protein STEHIDRAFT_81292 [Stereum hirsutum FP-91666
SS1]
Length = 581
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 58/99 (58%), Gaps = 15/99 (15%)
Query: 28 KRKAVLKASRSSNKRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRK-------VYKQEHPN 80
KR+ V ++++ K K+ K KDPN PK+P SA+F+FL+ R V+ +E
Sbjct: 403 KRENVFRSAQ--RKAGKSRKGNIKDPNAPKKPLSAYFMFLQRIRSDPALVQDVFGEETET 460
Query: 81 VK-AVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKLDYE 118
K +V A GK W+S+TD EK PF A+A + KL+YE
Sbjct: 461 TKQSVLAAGK-----WRSMTDDEKRPFLAQAEQEKLEYE 494
>gi|444720594|gb|ELW61376.1| High mobility group protein B3 [Tupaia chinensis]
Length = 124
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
KKD N PKRPPS FF+F EF K + + ++ V K GE W +L+D++K + K
Sbjct: 13 KKDSNAPKRPPSGFFLFFSEFHPKIKSSNHGI-SIRDVAKTLGEMWNNLSDSKKQSYITK 71
Query: 110 AAKRKLDYEKLMTAYNKK 127
AK K EK +T + K
Sbjct: 72 PAKLKERDEKDVTDFKSK 89
>gi|82594869|ref|XP_725606.1| high mobility group protein [Plasmodium yoelii yoelii 17XNL]
gi|23480678|gb|EAA17171.1| high mobility group protein [Plasmodium yoelii yoelii]
Length = 105
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 49/95 (51%), Gaps = 1/95 (1%)
Query: 33 LKASRSSNKRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNV-KAVSAVGKAG 91
K + K K + KDP+ PKR SA+ F +E R P++ K V+ VGK
Sbjct: 7 FKDMKMGGKEVKXRRKNXKDPHAPKRSLSAYMFFAKEKRAEIITRDPSLSKDVATVGKMI 66
Query: 92 GEKWKSLTDAEKAPFEAKAAKRKLDYEKLMTAYNK 126
GE W L + EKAP+E KA + K+ YEK Y K
Sbjct: 67 GEAWNKLDEREKAPYEKKAQEDKIRYEKEKMEYAK 101
>gi|449681405|ref|XP_002159252.2| PREDICTED: FACT complex subunit SSRP1-like [Hydra magnipapillata]
Length = 774
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
D N PKRP SAF +++ E R+ K ++P + A + + K GGE+WK+LTD K AK A
Sbjct: 543 DENAPKRPMSAFMLYMNEVREKIKADNPGI-AFTDIAKKGGEQWKTLTDKTKWENMAKEA 601
Query: 112 KRKLDYEKLMTAYNK 126
K K Y AY+K
Sbjct: 602 KNK--YTIDFAAYSK 614
>gi|111154063|ref|NP_892035.2| FACT complex subunit SSRP1 [Mus musculus]
gi|209862973|ref|NP_001129553.1| FACT complex subunit SSRP1 [Mus musculus]
gi|110283006|sp|Q08943.2|SSRP1_MOUSE RecName: Full=FACT complex subunit SSRP1; AltName: Full=Facilitates
chromatin transcription complex subunit SSRP1; AltName:
Full=Recombination signal sequence recognition protein
1; AltName: Full=Structure-specific recognition protein
1; AltName: Full=T160
gi|74138726|dbj|BAE27178.1| unnamed protein product [Mus musculus]
gi|74144584|dbj|BAE27280.1| unnamed protein product [Mus musculus]
gi|74144625|dbj|BAE27299.1| unnamed protein product [Mus musculus]
gi|74177273|dbj|BAE34555.1| unnamed protein product [Mus musculus]
Length = 708
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 60/105 (57%), Gaps = 4/105 (3%)
Query: 23 DRAAGKRKAVLKASRSSNKRTKNVKSA---KKDPNKPKRPPSAFFVFLEEFRKVYKQEHP 79
DR KR+ + +A + +++++ S KDPN PKRP SA+ ++L R+ K +HP
Sbjct: 511 DREEKKREQLKRAKMAKDRKSRRKSSEAKKGKDPNAPKRPMSAYMLWLNASREKIKSDHP 570
Query: 80 NVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKLDYEKLMTAY 124
+ +++ + K GE WK ++ +K ++ KA + +YEK M Y
Sbjct: 571 GI-SITDLSKKAGEIWKGMSKEKKEEWDRKAEDARREYEKAMKEY 614
>gi|395544035|ref|XP_003773918.1| PREDICTED: FACT complex subunit SSRP1 [Sarcophilus harrisii]
Length = 712
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRP SA+ ++L R+ K +HP + +++ + K GE WK ++ +K ++ KA
Sbjct: 542 KDPNAPKRPMSAYMLWLNASREKIKSDHPGI-SITDLSKKAGEIWKGMSKDKKEEWDRKA 600
Query: 111 AKRKLDYEKLMTAYNK 126
+ K +YEK M Y++
Sbjct: 601 EEAKREYEKAMKEYSE 616
>gi|62362190|gb|AAX81532.1| amphiHMG1/2-like protein [Adineta ricciae]
Length = 142
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 47 KSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPF 106
K A KDPN PKRP SAFF+F ++ R K++ P++ +V + K G +WK ++D + +
Sbjct: 9 KKASKDPNAPKRPLSAFFLFSQDERPDIKKKSPSL-SVGDISKEIGSRWKKVSDDVRKRY 67
Query: 107 EAKAAKRKLDYEKLMTAYNK 126
E KAA K YE + Y K
Sbjct: 68 EQKAADEKKKYEVRVAEYKK 87
>gi|322699087|gb|EFY90852.1| nucleosome binding protein [Metarhizium acridum CQMa 102]
gi|322708956|gb|EFZ00533.1| nucleosome binding protein [Metarhizium anisopliae ARSEF 23]
Length = 92
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Query: 56 PKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKL 115
PKR SA+ F E R+ + E+PN+ VGK GE+WK+L D ++AP+EAKAA K
Sbjct: 18 PKRGLSAYMFFANEQRENVRAENPNI-TFGQVGKVLGERWKALNDKQRAPYEAKAAADKK 76
Query: 116 DYEKLMTAY 124
YE A+
Sbjct: 77 RYEDEKAAF 85
>gi|422294533|gb|EKU21833.1| nucleosome binding protein, partial [Nannochloropsis gaditana
CCMP526]
Length = 195
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PK+ SA+ +F + R+ K E P +K V+ + K GE+W++L+ EK FE +AA
Sbjct: 33 DPNAPKQALSAYMLFTQASREAVKAEQPGLK-VTEISKVMGERWRALSAEEKKVFEDQAA 91
Query: 112 KRKLDYEKLMTAY 124
K+ Y + + AY
Sbjct: 92 SAKVRYGEELRAY 104
>gi|790198|gb|AAC41606.1| high mobility group protein [Plasmodium falciparum]
Length = 97
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Query: 37 RSSNKRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNV-KAVSAVGKAGGEKW 95
+++ K + + KKDP+ PKR SA+ F +E R + P + K V+ VGK GE W
Sbjct: 2 KNTGKEVRKRRKKKKDPHAPKRSLSAYMFFAKEKRAEIISKQPELSKDVATVGKMIGEAW 61
Query: 96 KSLTDAEKAPFEAKAAKRKLDYEK 119
L + EKAPFE KA + KL YEK
Sbjct: 62 NKLGEKEKAPFEKKAQEDKLRYEK 85
>gi|449706835|gb|EMD46595.1| high mobility group (HMG) box domain containing protein, partial
[Entamoeba histolytica KU27]
Length = 76
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 53 PNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEK 103
PN+PKRPP+ +F++L E R K+EHP+++ + + K E+WK+L + EK
Sbjct: 26 PNRPKRPPTPYFIYLNEHRASIKEEHPDIR-FTEISKVASEQWKALGEEEK 75
>gi|395329999|gb|EJF62384.1| hypothetical protein DICSQDRAFT_161203 [Dichomitus squalens
LYAD-421 SS1]
Length = 662
Score = 55.8 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 39/123 (31%), Positives = 62/123 (50%), Gaps = 6/123 (4%)
Query: 7 KGAVKKDKNEVVKPVEDRAAGKRKAVLKASRSSNKRTKNVKSAKKDPNKPKRPPSAFFVF 66
K A ++D N ++ + + A A R K K+ K KDPN PK+P SA+F+F
Sbjct: 481 KEARERDLNAYMRTLTPDDIKRENAYRTAQR---KAGKSRKGNIKDPNAPKKPLSAYFMF 537
Query: 67 LEEFR---KVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKLDYEKLMTA 123
L+ R ++ K+ + + KW+S+TD E+ PF A+A + KL+YE
Sbjct: 538 LQRIRSDPELVKEVFGDETETTKQSVLAAGKWRSMTDEERKPFLAQAEQEKLEYESARKM 597
Query: 124 YNK 126
Y +
Sbjct: 598 YEE 600
>gi|8170740|gb|AAB19500.2| HMG1-related DNA-binding protein [Mus sp.]
Length = 708
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 60/105 (57%), Gaps = 4/105 (3%)
Query: 23 DRAAGKRKAVLKASRSSNKRTKNVKSAKK---DPNKPKRPPSAFFVFLEEFRKVYKQEHP 79
DR KR+ + +A + +++++ S K DPN PKRP SA+ ++L R+ K +HP
Sbjct: 511 DREEKKREQLKRAKMAKDRKSRRKSSEAKKGKDPNAPKRPMSAYMLWLNASREKIKSDHP 570
Query: 80 NVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKLDYEKLMTAY 124
+ +++ + K GE WK ++ +K ++ KA + +YEK M Y
Sbjct: 571 GI-SITDLSKKAGEIWKGMSKEKKEEWDRKAEDARREYEKAMKEY 614
>gi|148277100|ref|NP_081312.2| high mobility group protein B4 [Mus musculus]
gi|81892334|sp|Q6P8W9.1|HMGB4_MOUSE RecName: Full=High mobility group protein B4
gi|38174595|gb|AAH61030.1| High-mobility group box 4 [Mus musculus]
gi|148698295|gb|EDL30242.1| high-mobility group box 4 [Mus musculus]
Length = 181
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DP P++PPS+F +F + + KQE+P+ V V KA G+ W + +AEK P+E KAA
Sbjct: 89 DPKAPRKPPSSFLLFSRDHYAMLKQENPDWTVVQ-VAKAAGKMWSTTDEAEKKPYEQKAA 147
Query: 112 KRKLDYEKLMTAY 124
+ Y + AY
Sbjct: 148 LMRAKYFEEQEAY 160
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVK-AVSAVGKAGGEKWKSLTDAEKAPFE 107
+KD +PK S++ F+ FR +K++ PN + EKW+S++ EKA +E
Sbjct: 2 GEKDQLRPKVNVSSYIHFMLNFRNKFKEQQPNTYLGFKEFSRKCSEKWRSISKHEKAKYE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A A K Y++ M Y
Sbjct: 62 ALAELDKARYQQEMMNY 78
>gi|1806648|gb|AAB41544.1| structure-specific recognition protein 1 [Bos taurus]
Length = 460
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRP SA+ ++L R+ K +HP + +V+ + K GE WK ++ +K ++ KA
Sbjct: 293 KDPNAPKRPMSAYMLWLNASREKIKSDHPGI-SVTDLSKKAGEIWKGMSKEKKEEWDRKA 351
Query: 111 AKRKLDYEKLMTAY 124
+ +YEK M Y
Sbjct: 352 EDARREYEKAMKEY 365
>gi|392876742|gb|AFM87203.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 58 RPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKLDY 117
RPPSAFF+F + R + E+P + ++ V K GE W LT +K P+E A+ K Y
Sbjct: 96 RPPSAFFIFCSDHRPRIRGENPGI-SIGDVAKKMGELWSGLTAKDKKPYEEGGAQLKEKY 154
Query: 118 EKLMTAY 124
EK + AY
Sbjct: 155 EKEVAAY 161
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K+DP +P+ S++ F++ R+ +K++HP+ S K E+WK++T +K FE
Sbjct: 2 GKRDPRQPRGKMSSYAFFVQNSREEHKKKHPDSSVDFSEFSKQCSERWKAMTPKDKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K+ Y++ M Y
Sbjct: 62 DLAKNDKVRYDREMRNY 78
>gi|12838247|dbj|BAB24141.1| unnamed protein product [Mus musculus]
Length = 181
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DP P++PPS+F +F + + KQE+P+ V V KA G+ W + +AEK P+E KAA
Sbjct: 89 DPKAPRKPPSSFLLFSRDHYAMLKQENPDWTVVQ-VAKAAGKMWSTTDEAEKKPYEQKAA 147
Query: 112 KRKLDYEKLMTAY 124
+ Y + AY
Sbjct: 148 LMRAKYFEEQEAY 160
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVK-AVSAVGKAGGEKWKSLTDAEKAPFE 107
+KD +PK S++ F+ FR +K++ PN + EKW+S++ EKA +E
Sbjct: 2 GEKDQLRPKVNVSSYIHFMLNFRNKFKEQQPNTYLGFKEFSRKCSEKWRSISKHEKAKYE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A A K Y++ M Y
Sbjct: 62 ALAEHDKARYQQEMMNY 78
>gi|157831385|pdb|1HSM|A Chain A, The Structure Of The Hmg Box And Its Interaction With Dna
gi|157831386|pdb|1HSN|A Chain A, The Structure Of The Hmg Box And Its Interaction With Dna
Length = 79
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 56 PKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKL 115
PKRPPSAFF+F E+R K EHP + ++ V K GE W + +K P+E KAAK K
Sbjct: 3 PKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKE 61
Query: 116 DYEKLMTAYNKK 127
YEK + AY K
Sbjct: 62 KYEKDIAAYRAK 73
>gi|116283314|gb|AAH04848.1| Ssrp1 protein [Mus musculus]
Length = 633
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 60/105 (57%), Gaps = 4/105 (3%)
Query: 23 DRAAGKRKAVLKASRSSNKRTKNVKSA---KKDPNKPKRPPSAFFVFLEEFRKVYKQEHP 79
DR KR+ + +A + +++++ S KDPN PKRP SA+ ++L R+ K +HP
Sbjct: 511 DREEKKREQLKRAKMAKDRKSRRKSSEAKKGKDPNAPKRPMSAYMLWLNASREKIKSDHP 570
Query: 80 NVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKLDYEKLMTAY 124
+ +++ + K GE WK ++ +K ++ KA + +YEK M Y
Sbjct: 571 GI-SITDLSKKAGEIWKGMSKEKKEEWDRKAEDARREYEKAMKEY 614
>gi|343427561|emb|CBQ71088.1| probable NHP6B-nonhistone chromosomal protein [Sporisorium
reilianum SRZ2]
Length = 99
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 53/95 (55%), Gaps = 4/95 (4%)
Query: 34 KASRSSNKRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGE 93
K+S S+ KRT +KKDP PKRP SA+ F ++ R+ K +P S VG+ G
Sbjct: 9 KSSTSTQKRTTK---SKKDPAAPKRPLSAYMFFSQDHRERVKTANPEA-GFSDVGRLLGA 64
Query: 94 KWKSLTDAEKAPFEAKAAKRKLDYEKLMTAYNKKQ 128
KW ++DAEK P+ A + K E AYNK++
Sbjct: 65 KWNEMSDAEKKPYNDMANRDKARAEAEKAAYNKRR 99
>gi|432113411|gb|ELK35821.1| FACT complex subunit SSRP1 [Myotis davidii]
Length = 709
Score = 55.5 bits (132), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 52/88 (59%), Gaps = 2/88 (2%)
Query: 37 RSSNKRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWK 96
R S K+ VK K DPN PKRP SA+ ++L R+ K +HP + +++ + K GE WK
Sbjct: 529 RKSRKKPMEVKKGK-DPNAPKRPMSAYMLWLNASREKIKSDHPGI-SITDLSKKAGEIWK 586
Query: 97 SLTDAEKAPFEAKAAKRKLDYEKLMTAY 124
+++ +K ++ KA + +YEK M Y
Sbjct: 587 AMSKEKKEEWDRKAEDARREYEKAMKEY 614
>gi|335281869|ref|XP_003353912.1| PREDICTED: FACT complex subunit SSRP1 [Sus scrofa]
Length = 709
Score = 55.5 bits (132), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 51/88 (57%), Gaps = 2/88 (2%)
Query: 37 RSSNKRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWK 96
R S K+ VK K DPN PKRP SA+ ++L R+ K +HP + +++ + K GE WK
Sbjct: 529 RKSRKKPTEVKKGK-DPNAPKRPMSAYMLWLNASREKIKSDHPGI-SITDLSKKAGEIWK 586
Query: 97 SLTDAEKAPFEAKAAKRKLDYEKLMTAY 124
++ +K ++ KA + +YEK M Y
Sbjct: 587 GMSKEKKEEWDRKAEDARREYEKAMKEY 614
>gi|156057705|ref|XP_001594776.1| hypothetical protein SS1G_04584 [Sclerotinia sclerotiorum 1980]
gi|154702369|gb|EDO02108.1| hypothetical protein SS1G_04584 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 554
Score = 55.5 bits (132), Expect = 6e-06, Method: Composition-based stats.
Identities = 35/107 (32%), Positives = 52/107 (48%), Gaps = 3/107 (2%)
Query: 22 EDRAAGKRKAVLKASRSSNKRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNV 81
E + G R A S + K + K D N P+RPPSA+ +F + R+ K +
Sbjct: 83 EPKVGGGRDAKDGGSGPHGAKRKYRRHPKTDENAPERPPSAYVIFSNKMREDLKGRN--- 139
Query: 82 KAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKLDYEKLMTAYNKKQ 128
+ + + K GE W++L+ AEK P+E A K K Y + Y K Q
Sbjct: 140 LSFTEIAKLVGENWQNLSPAEKEPYEQSAYKAKERYNNELAEYKKTQ 186
>gi|388857490|emb|CCF48846.1| uncharacterized protein [Ustilago hordei]
Length = 292
Score = 55.5 bits (132), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
+DP KPKRP SAFF FL + R + PN+ S K GGE+WK + +KAP+E +A
Sbjct: 215 RDPAKPKRPNSAFFEFLNDLR-ARETVIPNITEFS---KRGGERWKQMAPEQKAPYEQRA 270
Query: 111 AKRKLDYEKLMTAYN 125
Y++ + YN
Sbjct: 271 LHALEQYKRDLEIYN 285
>gi|384491850|gb|EIE83046.1| hypothetical protein RO3G_07751 [Rhizopus delemar RA 99-880]
Length = 101
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 43 TKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAE 102
TK + +KKDP+ PKR SA+ F ++ R K+E+P + +GK GE+WK+L++ E
Sbjct: 20 TKKARRSKKDPSAPKRGLSAYMFFSQDQRPTVKEENPKA-SFGEIGKILGERWKALSEEE 78
Query: 103 KAPFEAKAAKRKLDYE 118
K P+ KA K YE
Sbjct: 79 KKPYLKKAEDDKKRYE 94
>gi|355784552|gb|EHH65403.1| hypothetical protein EGM_02155, partial [Macaca fascicularis]
Length = 116
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 40/76 (52%), Gaps = 7/76 (9%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PKRP S FF+F EF K +P + ++ V K GE W +L D+EK P+ K
Sbjct: 26 DPNAPKRPLSGFFLFCSEFHPKMKSTNPGI-SIGDVAKKLGEMWNNLNDSEKQPYITKK- 83
Query: 112 KRKLDYEKLMTAYNKK 127
YEK + Y K
Sbjct: 84 -----YEKDVADYKSK 94
>gi|302828472|ref|XP_002945803.1| hypothetical protein VOLCADRAFT_72419 [Volvox carteri f.
nagariensis]
gi|300268618|gb|EFJ52798.1| hypothetical protein VOLCADRAFT_72419 [Volvox carteri f.
nagariensis]
Length = 199
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PK+ +AF F R K ++P V + VGK GEKWKSL EK+ +E KA
Sbjct: 76 KDPNAPKKNLTAFMYFSNAQRDKVKTDNPGV-SFGEVGKLLGEKWKSLGANEKSEYEEKA 134
Query: 111 AKRKLDYEKLMTAY 124
K K Y K M AY
Sbjct: 135 KKDKERYAKEMEAY 148
>gi|242215849|ref|XP_002473736.1| predicted protein [Postia placenta Mad-698-R]
gi|220727131|gb|EED81060.1| predicted protein [Postia placenta Mad-698-R]
Length = 578
Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 25/90 (27%), Positives = 48/90 (53%)
Query: 38 SSNKRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKS 97
++ R + ++ ++DP RPP+AF +F E+ + + N + K GE WK
Sbjct: 92 NATSRWRAQRNRERDPTWVPRPPNAFIIFRSEYSRKHAHGGTNKAEEKTLSKRAGETWKL 151
Query: 98 LTDAEKAPFEAKAAKRKLDYEKLMTAYNKK 127
L+DAEK P++ +A + + D+++ Y +
Sbjct: 152 LSDAEKKPYKLRAEQERADHQRRNPGYKYR 181
>gi|392876906|gb|AFM87285.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 58 RPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKLDY 117
RPPSAFF+F + R + E+P + ++ V K GE W LT +K P+E + A+ K Y
Sbjct: 96 RPPSAFFIFCFDHRLRIRGENPGI-SIGDVAKKMGELWSGLTAKDKKPYEERGAQLKEKY 154
Query: 118 EKLMTAY 124
EK + AY
Sbjct: 155 EKEVAAY 161
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K+DP +P+ S++ F++ R+ +K++HP+ S K E+WK++T +K FE
Sbjct: 2 GKRDPRQPRGKMSSYAFFVQNSREEHKKKHPDSSVDFSEFSKQCSERWKAMTPKDKGKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K+ Y++ M Y
Sbjct: 62 DLAKNDKVRYDREMRNY 78
>gi|440804471|gb|ELR25348.1| HMG (high mobility group) box domain containing protein
[Acanthamoeba castellanii str. Neff]
Length = 205
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
+KDPN PKR +A+ +F +E R K +HP V VGK GE W +L D +K +
Sbjct: 6 RKDPNAPKRAMTAYMLFSQEKRTQIKTDHPTV-GFGQVGKLLGEAWAALPDGDKRKYNEL 64
Query: 110 AAKRKLDYEKLMTAY 124
AAK K+ Y+K Y
Sbjct: 65 AAKDKIRYQKEAAQY 79
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
KKDPN PK+P SAFF F ++ R K E+P+ + +GK GE+W L E+ FE
Sbjct: 99 KKDPNAPKKPCSAFFHFSKKMRPRIKDENPDA-SFGQLGKIIGEQWSKLGADERKEFETL 157
Query: 110 AAKRKLDYEKLMTAYNKK 127
AA K Y K M Y K
Sbjct: 158 AAADKERYAKEMKDYQAK 175
>gi|54020668|ref|NP_112383.1| FACT complex subunit SSRP1 [Rattus norvegicus]
gi|83305804|sp|Q04931.2|SSRP1_RAT RecName: Full=FACT complex subunit SSRP1; AltName: Full=Facilitates
chromatin transcription complex subunit SSRP1; AltName:
Full=Recombination signal sequence recognition protein
1; AltName: Full=Structure-specific recognition protein
1; AltName: Full=T160
gi|53734496|gb|AAH83588.1| Structure specific recognition protein 1 [Rattus norvegicus]
gi|149022436|gb|EDL79330.1| structure specific recognition protein 1, isoform CRA_a [Rattus
norvegicus]
gi|149022437|gb|EDL79331.1| structure specific recognition protein 1, isoform CRA_a [Rattus
norvegicus]
Length = 709
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 60/105 (57%), Gaps = 4/105 (3%)
Query: 23 DRAAGKRKAVLKASRSSNKRTKNVKSAKK---DPNKPKRPPSAFFVFLEEFRKVYKQEHP 79
DR KRK + +A + +++++ S K DPN PKRP SA+ ++L R+ K +HP
Sbjct: 511 DREEKKRKQLKRAKMAKDRKSRKKSSEGKKGKDPNAPKRPMSAYMLWLNASREKIKSDHP 570
Query: 80 NVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKLDYEKLMTAY 124
+ +++ + K GE WK ++ +K ++ KA + +YEK M Y
Sbjct: 571 GI-SITDLSKKAGEIWKGMSKEKKEEWDRKAEDARREYEKAMKEY 614
>gi|426245460|ref|XP_004023562.1| PREDICTED: LOW QUALITY PROTEIN: FACT complex subunit SSRP1 [Ovis
aries]
Length = 703
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 52/88 (59%), Gaps = 2/88 (2%)
Query: 37 RSSNKRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWK 96
R S K+ VK K DPN PKRP SA+ ++L R+ K +HP + +V+ + K GE WK
Sbjct: 523 RKSRKKPLEVKKGK-DPNAPKRPMSAYMLWLNASREKIKSDHPGI-SVTDLSKKAGEIWK 580
Query: 97 SLTDAEKAPFEAKAAKRKLDYEKLMTAY 124
++ +K ++ KA + + +YEK M Y
Sbjct: 581 GMSKEKKEEWDRKAEEARREYEKAMKEY 608
>gi|444721192|gb|ELW61941.1| High mobility group protein B1 [Tupaia chinensis]
Length = 300
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 35/55 (63%), Gaps = 2/55 (3%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKW-KSLTDAEKA 104
KDPN PKRPPSAFF+F E+R K EHP + ++ V K GE W + DA +A
Sbjct: 90 KDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGDVAKKLGEMWNNTAADANRA 143
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DP KP+ S++ F++ + +K++HP+ S K E+WK+++ EK F+
Sbjct: 2 GKGDPKKPRGKMSSYAFFVQTCWEEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFK 61
Query: 108 AKAAKRKLDYEKLMTAY 124
A K YE+ M Y
Sbjct: 62 DMAKVNKARYEREMKTY 78
>gi|151301198|ref|NP_001093087.1| mobility group protein 1B [Bombyx mori]
gi|95102634|gb|ABF51255.1| mobility group protein 1B [Bombyx mori]
Length = 119
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 45/71 (63%), Gaps = 3/71 (4%)
Query: 54 NKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKR 113
+KPKRP SA+ ++L R+ K E+P ++ V+ + K GGE WKS+ D K +E KAAK
Sbjct: 3 DKPKRPMSAYMLWLNSAREQIKSENPGLR-VTEIAKKGGEIWKSMKD--KTEWEQKAAKA 59
Query: 114 KLDYEKLMTAY 124
K Y K + +Y
Sbjct: 60 KEQYAKDLESY 70
>gi|110287688|sp|Q4PBZ9.2|NHP6_USTMA RecName: Full=Non-histone chromosomal protein 6
Length = 99
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 54/95 (56%), Gaps = 4/95 (4%)
Query: 34 KASRSSNKRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGE 93
K+S S+ KRT AKKDP+ PKRP SA+ F ++ R+ K +P VG+ G
Sbjct: 9 KSSTSTQKRTT---KAKKDPDAPKRPLSAYMFFSQDQRERVKNANPEA-GFGEVGRLLGA 64
Query: 94 KWKSLTDAEKAPFEAKAAKRKLDYEKLMTAYNKKQ 128
KWK +++AEK P+ A + K E AYNK++
Sbjct: 65 KWKEMSEAEKKPYNDMANRDKARAEAEKAAYNKRR 99
>gi|444727550|gb|ELW68036.1| High mobility group protein B1 [Tupaia chinensis]
Length = 149
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
K+P+ PKRPPSAFF+F E+R K EHP + ++ K GE W + +K P+E K
Sbjct: 89 KNPSAPKRPPSAFFLFCSEYRPKIKGEHPGL-SIDDAAKKLGEMWNNTAADDKQPYEKKT 147
Query: 111 A 111
A
Sbjct: 148 A 148
>gi|167536391|ref|XP_001749867.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771582|gb|EDQ85246.1| predicted protein [Monosiga brevicollis MX1]
Length = 197
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Query: 47 KSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPF 106
K AKKDPNKPK SA+ F ++ R + +++P+ K ++ V K G W+ ++DA K P+
Sbjct: 29 KRAKKDPNKPKNAQSAYMFFSQKVRPQFSKDNPD-KKMTDVSKLIGAAWREMSDAAKKPY 87
Query: 107 EAKAAKRKLDYEKLMTAY 124
E A + K Y+ M Y
Sbjct: 88 EEMARRDKQRYQHQMATY 105
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
+KDP+ PK+P +A+F++ + R + ++ N V+ + K G +WK L+DA K P++ +
Sbjct: 120 RKDPDAPKKPLTAYFLYAADRRAALRAQNRNA-TVADIAKIIGAEWKDLSDAVKKPYQDR 178
Query: 110 AAKRKLDYEKLMTAY 124
A + K Y+K + Y
Sbjct: 179 ADRLKSQYQKEVELY 193
>gi|417404085|gb|JAA48818.1| Putative nucleosome-binding factor spn pob3 subunit [Desmodus
rotundus]
Length = 709
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 51/88 (57%), Gaps = 2/88 (2%)
Query: 37 RSSNKRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWK 96
R S K+ VK K DPN PKRP SA+ ++L R+ K +HP + +++ + K GE WK
Sbjct: 529 RKSRKKPMEVKKGK-DPNAPKRPMSAYMLWLNASREKIKSDHPGI-SITDLSKKAGEIWK 586
Query: 97 SLTDAEKAPFEAKAAKRKLDYEKLMTAY 124
++ +K ++ KA + +YEK M Y
Sbjct: 587 GMSKEKKEEWDRKAEDARREYEKAMKEY 614
>gi|118344004|ref|NP_001071827.1| FACT complex subunit SSRP1 [Ciona intestinalis]
gi|110287972|sp|Q4H2R2.1|SSRP1_CIOIN RecName: Full=FACT complex subunit SSRP1; AltName: Full=Facilitates
chromatin transcription complex subunit SSRP1; AltName:
Full=Structure-specific recognition protein 1
gi|70571284|dbj|BAE06715.1| transcription factor protein [Ciona intestinalis]
Length = 704
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 46 VKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAP 105
VK KKDPN PKRP SA+F++L E R +K E+ + +V+ + K G++WK + EK
Sbjct: 544 VKRKKKDPNAPKRPQSAYFLWLNENRGRFKAENKGI-SVTELTKLAGKEWKKIDPDEKQK 602
Query: 106 FEAKAAKRKLDYEKLMTAY 124
FE K K+ ++ M Y
Sbjct: 603 FERMYQKSKVKFDAAMKEY 621
>gi|308238179|ref|NP_001184126.1| structure specific recognition protein 1 [Xenopus (Silurana)
tropicalis]
Length = 695
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DP+ PKRP SA+ ++L R+ K E+P + +++ + K GE WKS++ +K ++ +A
Sbjct: 537 DPSAPKRPMSAYMLWLNASREKIKSENPGI-SITDLSKKAGEIWKSMSKDKKEEWDRRAE 595
Query: 112 KRKLDYEKLMTAYN 125
+ K DYEK M YN
Sbjct: 596 EAKRDYEKAMKEYN 609
>gi|296479522|tpg|DAA21637.1| TPA: structure specific recognition protein 1 [Bos taurus]
Length = 709
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 51/88 (57%), Gaps = 2/88 (2%)
Query: 37 RSSNKRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWK 96
R S K+ VK K DPN PKRP SA+ ++L R+ K +HP + +V+ + K GE WK
Sbjct: 529 RKSRKKPLEVKKGK-DPNAPKRPMSAYMLWLNASREKIKSDHPGI-SVTDLSKKAGEIWK 586
Query: 97 SLTDAEKAPFEAKAAKRKLDYEKLMTAY 124
++ +K ++ KA + +YEK M Y
Sbjct: 587 GMSKEKKEEWDRKAEDARREYEKAMKEY 614
>gi|195977121|gb|ACG63669.1| high-mobility group box 1 (predicted) [Otolemur garnettii]
Length = 227
Score = 55.1 bits (131), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F E+R K EH + V K GE W + +K P E KA
Sbjct: 91 KDPNAPKRPPSAFFLFCSEYRPKIKGEH--HLSTGDVAKKLGEMWSNPAAGDKQPEEKKA 148
Query: 111 AKRKLDYEKLMTAYNKK 127
AK + +K + AY K
Sbjct: 149 AKLEEKDKKDIAAYRAK 165
>gi|145480005|ref|XP_001426025.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124393097|emb|CAK58627.1| unnamed protein product [Paramecium tetraurelia]
Length = 223
Score = 55.1 bits (131), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA--------VSAVGKAGGEKWKSLTDA 101
++DPN PKRP +AFF+F +++R+ + +P + + + + G+KW+S+++
Sbjct: 27 ERDPNAPKRPLTAFFLFSQKYREKVLERNPGIDLSDYQLEVKLIQISQMAGQKWQSMSEQ 86
Query: 102 EKAPFEAKAAKRKLDYEKLMTAYNKKQ 128
EK P+ + + K Y + YN+KQ
Sbjct: 87 EKQPYVDQYNQAKSKYNDDVKEYNEKQ 113
>gi|155371817|ref|NP_001094511.1| FACT complex subunit SSRP1 [Bos taurus]
gi|151554654|gb|AAI49986.1| SSRP1 protein [Bos taurus]
gi|440894802|gb|ELR47155.1| FACT complex subunit SSRP1 [Bos grunniens mutus]
Length = 709
Score = 55.1 bits (131), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 51/88 (57%), Gaps = 2/88 (2%)
Query: 37 RSSNKRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWK 96
R S K+ VK K DPN PKRP SA+ ++L R+ K +HP + +V+ + K GE WK
Sbjct: 529 RKSRKKPLEVKKGK-DPNAPKRPMSAYMLWLNASREKIKSDHPGI-SVTDLSKKAGEIWK 586
Query: 97 SLTDAEKAPFEAKAAKRKLDYEKLMTAY 124
++ +K ++ KA + +YEK M Y
Sbjct: 587 GMSKEKKEEWDRKAEDARREYEKAMKEY 614
>gi|27466905|gb|AAO12859.1| high mobility group protein [Branchiostoma belcheri tsingtauense]
Length = 164
Score = 55.1 bits (131), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAK 109
KKDPN PKR SAFF++ + R + HP+ + V + K G++WK ++D++KA +E K
Sbjct: 92 KKDPNAPKRAMSAFFMYCADARPKVRAAHPDFQ-VGDIAKILGKQWKEISDSDKAKYEKK 150
Query: 110 AAKRKLDYEKLMT 122
A + Y+K +
Sbjct: 151 AQTERARYQKELA 163
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAV-SAVGKAGGEKWKSLTDAEKAPFEAK 109
KD NKPK SA+ F++E R+ +++++PN + V + + +WK++ D EK F+
Sbjct: 3 KDKNKPKGKMSAYACFVQECRREHEKKYPNKQVVFTEFSQKCASRWKTMNDDEKKRFQVL 62
Query: 110 AAKRKLDYEKLMTAY 124
A K YE+ M Y
Sbjct: 63 AEADKRRYEQNMAKY 77
>gi|71012570|ref|XP_758511.1| hypothetical protein UM02364.1 [Ustilago maydis 521]
gi|46098169|gb|EAK83402.1| hypothetical protein UM02364.1 [Ustilago maydis 521]
Length = 125
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 54/95 (56%), Gaps = 4/95 (4%)
Query: 34 KASRSSNKRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGE 93
K+S S+ KRT AKKDP+ PKRP SA+ F ++ R+ K +P VG+ G
Sbjct: 35 KSSTSTQKRTTK---AKKDPDAPKRPLSAYMFFSQDQRERVKNANPEA-GFGEVGRLLGA 90
Query: 94 KWKSLTDAEKAPFEAKAAKRKLDYEKLMTAYNKKQ 128
KWK +++AEK P+ A + K E AYNK++
Sbjct: 91 KWKEMSEAEKKPYNDMANRDKARAEAEKAAYNKRR 125
>gi|440799045|gb|ELR20106.1| HMG (high mobility group) box domain containing protein
[Acanthamoeba castellanii str. Neff]
Length = 143
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKR +A+ +F E R K ++P + + K +KWK+L+D EKAP+ KA
Sbjct: 48 KDPNAPKRAKTAYIIFATEERPRAKADNPEL-GFGDLTKCVSDKWKALSDDEKAPYLEKA 106
Query: 111 AKRKLDYEKLMTAYNK 126
A+ K Y ++ YNK
Sbjct: 107 AQDKERYADEVSKYNK 122
>gi|444706303|gb|ELW47646.1| Glycine/arginine-rich protein 1 [Tupaia chinensis]
Length = 485
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPSAFF+F E+R K EHP + ++ + K GE W S T A+ KA
Sbjct: 35 KDPNAPKRPPSAFFLFCSEYRPKIK-EHPGL-SIGDIAKKLGELWTS-TAADGTQPRKKA 91
Query: 111 AKRKLDYEKLMTAY 124
AK + + K + AY
Sbjct: 92 AKLEEKHGKAIAAY 105
>gi|351698366|gb|EHB01285.1| High mobility group protein B2 [Heterocephalus glaber]
Length = 211
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 54 NKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKR 113
N PKRP SAFF+F E R K EHP + ++ K G+ W + +K P+E K AK
Sbjct: 94 NAPKRPSSAFFLFCCEHRPKIKSEHPGL-SIGDTAKELGKMWSEQSAKDKQPYEQKVAKL 152
Query: 114 KLDYEKLMTAY 124
K YEK + Y
Sbjct: 153 KEKYEKDIAPY 163
Score = 43.1 bits (100), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 49 AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFE 107
K DPNKP+ S++ F++ R+ +K++HP+ + K E+WK+++ EK+ FE
Sbjct: 2 GKGDPNKPRGKMSSYAFFVQNCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFE 61
Query: 108 AKAAKRKLDYEKLMTAY 124
K Y++ M Y
Sbjct: 62 DMPKSYKTRYDREMKNY 78
>gi|255073265|ref|XP_002500307.1| set domain protein [Micromonas sp. RCC299]
gi|226515569|gb|ACO61565.1| set domain protein [Micromonas sp. RCC299]
Length = 1496
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 57 KRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKL 115
KRP +AFF+F +E R + ++ P ++ +SAVGK GE+W+ L+D EK P+ KA + +
Sbjct: 674 KRPMTAFFIFSQEQRALLIEQRPELRTNISAVGKLMGERWRKLSDEEKFPYAIKAEEARH 733
Query: 116 DY 117
+Y
Sbjct: 734 EY 735
>gi|444713636|gb|ELW54532.1| High mobility group protein B1 [Tupaia chinensis]
Length = 148
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 44/77 (57%), Gaps = 2/77 (2%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRPPS FF+F E+R + EHP + + V K GE W + K P+E KA
Sbjct: 28 KDPNGPKRPPSVFFLFCSEYRPKIR-EHPGL-LIGDVAKKLGEMWNNTAAGTKQPYEKKA 85
Query: 111 AKRKLDYEKLMTAYNKK 127
AK K EK + AY K
Sbjct: 86 AKLKEKCEKDIAAYRSK 102
>gi|148226156|ref|NP_001084164.1| FACT complex subunit SSRP1 [Xenopus laevis]
gi|82175412|sp|Q9W602.1|SSRP1_XENLA RecName: Full=FACT complex subunit SSRP1; AltName: Full=DNA
unwinding factor 87 kDa subunit; Short=DUF87; AltName:
Full=Facilitates chromatin transcription complex subunit
ssrp1; AltName: Full=Structure-specific recognition
protein 1
gi|4586285|dbj|BAA76333.1| DUF87 [Xenopus laevis]
Length = 693
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDP PKRP SA+ ++L R+ K E+P + +++ + K GE WK+++ +K ++ +A
Sbjct: 536 KDPGAPKRPMSAYMLWLNASREKIKSENPGI-SITDLSKKAGEIWKNMSRDKKEEWDRRA 594
Query: 111 AKRKLDYEKLMTAYN 125
+ K DYEK M YN
Sbjct: 595 EEAKRDYEKAMKEYN 609
>gi|351707228|gb|EHB10147.1| FACT complex subunit SSRP1 [Heterocephalus glaber]
Length = 709
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 54/96 (56%), Gaps = 2/96 (2%)
Query: 29 RKAVLKASRSSNKRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVG 88
++A + R S K+T K K DPN PKRP SA+ ++L R+ K +HP + +++ +
Sbjct: 521 KRAKVAKDRKSRKKTVEAKKGK-DPNAPKRPMSAYMLWLNASREKIKSDHPGI-SITDLS 578
Query: 89 KAGGEKWKSLTDAEKAPFEAKAAKRKLDYEKLMTAY 124
K GE WK + +K ++ KA + +YEK M Y
Sbjct: 579 KKAGEIWKGMPKEKKEEWDHKAEDARREYEKAMKEY 614
>gi|395526464|ref|XP_003765383.1| PREDICTED: high mobility group protein B4 [Sarcophilus harrisii]
Length = 207
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DP PKRPPS+FF+F E K ++P+ V V K GE W ++ +K P+E KAA
Sbjct: 92 DPKAPKRPPSSFFLFSREHYTKIKSDNPHWSVVQ-VAKLLGEMWSKKSEQDKQPYEEKAA 150
Query: 112 KRKLDYEKLMTAY 124
+ + Y + + Y
Sbjct: 151 RLRAKYHQELMTY 163
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Query: 55 KPKRPPSAFFVFLEEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFEAKAAKR 113
KPK S++ FL R +K++ PN K EKWK+++ EK+ +EA A
Sbjct: 7 KPKVNLSSYVHFLLNCRNKHKEQQPNAYINFKEFSKRCSEKWKTISKHEKSKYEAIARLD 66
Query: 114 KLDYEKLMTAY 124
K Y+K M Y
Sbjct: 67 KARYQKEMKNY 77
>gi|444705434|gb|ELW46861.1| FACT complex subunit SSRP1 [Tupaia chinensis]
Length = 704
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 51/88 (57%), Gaps = 2/88 (2%)
Query: 37 RSSNKRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWK 96
R S K+ VK K DPN PKRP SA+ ++L R+ K +HP + +++ + K GE WK
Sbjct: 524 RKSRKKPVEVKKGK-DPNAPKRPMSAYMLWLNASREKIKSDHPGI-SITDLSKKAGEIWK 581
Query: 97 SLTDAEKAPFEAKAAKRKLDYEKLMTAY 124
++ +K ++ KA + +YEK M Y
Sbjct: 582 GMSKEKKEEWDRKAEDARREYEKAMKEY 609
>gi|394337181|gb|AFN27605.1| high mobility group protein 1 [Azumapecten farreri]
Length = 215
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 40/59 (67%), Gaps = 3/59 (5%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
DP KPKRP +A+F+FL +FRK K ++ N+ + +AG E W+ LTD +K P+E ++
Sbjct: 96 DPTKPKRPQTAYFLFLGDFRK--KMKNSNIGHKDIIKQAGAE-WRQLTDQDKKPYEDQS 151
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 40/74 (54%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KD N+PKR SA+F FL R K NV ++ K +W+S+T ++K F+ +A
Sbjct: 17 KDANRPKRATSAYFFFLAHCRAEAKTTGRNVSKIADFTKEASAQWRSMTSSDKKQFDDRA 76
Query: 111 AKRKLDYEKLMTAY 124
AK K Y+ M +
Sbjct: 77 AKDKARYDAEMAVF 90
>gi|729730|sp|P40623.1|HMG1B_CHITE RecName: Full=Mobility group protein 1B
gi|156589|gb|AAA21713.1| high mobility group protein 1b [Chironomus tentans]
Length = 110
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 47/73 (64%), Gaps = 3/73 (4%)
Query: 54 NKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKR 113
+KPKRP SA+ ++L R+ K+E+P+ K V+ V K GGE W+ L D K+ +EAKAA
Sbjct: 3 DKPKRPLSAYMLWLNSARESIKRENPDFK-VTEVAKKGGELWRGLKD--KSEWEAKAATA 59
Query: 114 KLDYEKLMTAYNK 126
K +Y + + Y +
Sbjct: 60 KQNYIRALQEYER 72
>gi|398398886|ref|XP_003852900.1| hypothetical protein MYCGRDRAFT_31129, partial [Zymoseptoria
tritici IPO323]
gi|339472782|gb|EGP87876.1| hypothetical protein MYCGRDRAFT_31129 [Zymoseptoria tritici IPO323]
Length = 90
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 50 KKDPNKPKRPPSAFFVFLEEFRKVYKQE---HPNVKAVSA--VGKAGGEKWKSLTDAEKA 104
++D N PKRP +A+F +L E R + +E +P+ + A + K E+WK+LTDAE+
Sbjct: 7 QRDMNAPKRPLTAYFRYLREQRPILTREMAENPDTEGTKAGDISKLATERWKALTDAERE 66
Query: 105 PFEAKAAKRKLDYEKLMTAY 124
P++ K L YE AY
Sbjct: 67 PYKQAYQKELLKYETDTKAY 86
>gi|312385331|gb|EFR29858.1| hypothetical protein AND_00899 [Anopheles darlingi]
Length = 174
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 61/101 (60%), Gaps = 5/101 (4%)
Query: 28 KRKAVLKASRSSN--KRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVS 85
+R+ K +R S+ +R+++ + +KPKRP SA+ ++L R+ K+E+P +K V+
Sbjct: 37 RRRPRAKQARPSDAIRRSRHSPNPMPGSSKPKRPLSAYMLWLNSAREQIKKENPGIK-VT 95
Query: 86 AVGKAGGEKWKSLTDAEKAPFEAKAAKRKLDYEKLMTAYNK 126
+ K GGE W+ + D K+ +E KAAK K +Y K M + +
Sbjct: 96 EIAKKGGELWRGMKD--KSEWEFKAAKMKDEYNKQMQDFER 134
>gi|15237042|ref|NP_192846.1| HMG (high mobility group) box protein [Arabidopsis thaliana]
gi|75266789|sp|Q9T012.1|HMG13_ARATH RecName: Full=High mobility group B protein 13; AltName:
Full=Nucleosome/chromatin assembly factor group D 13
gi|4850287|emb|CAB43043.1| 98b like protein [Arabidopsis thaliana]
gi|7267807|emb|CAB81209.1| 98b like protein [Arabidopsis thaliana]
gi|22136604|gb|AAM91621.1| putative 98b protein [Arabidopsis thaliana]
gi|332657570|gb|AEE82970.1| HMG (high mobility group) box protein [Arabidopsis thaliana]
Length = 446
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPNKPK+P S++F+F ++ RK +EHP + S V KW L + EK + +KAA
Sbjct: 368 DPNKPKKPTSSYFLFCKDARKSVLEEHPGINN-STVTAHISLKWMELGEEEKQVYNSKAA 426
Query: 112 KRKLDYEKLMTAYNK 126
+ Y+K + YNK
Sbjct: 427 ELMEAYKKEVEEYNK 441
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DP KPK+P SA+ ++ E R K E+ K+V V K GE+WK+L++ +KAP++ A
Sbjct: 242 DPLKPKQPISAYLIYANERRAALKGEN---KSVIEVAKMAGEEWKNLSEEKKAPYDQMAK 298
Query: 112 KRKLDYEKLMTAY 124
K K Y + M Y
Sbjct: 299 KNKEIYLQEMEGY 311
>gi|68061725|ref|XP_672863.1| high mobility group protein [Plasmodium berghei strain ANKA]
gi|68076125|ref|XP_679982.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56490279|emb|CAI01706.1| high mobility group protein, putative [Plasmodium berghei]
gi|56500842|emb|CAH99000.1| hypothetical protein PB001601.02.0 [Plasmodium berghei]
Length = 98
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNV-KAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
DP PKR SA+ ++++ R QE P + K V+ VGK GE W LT A+KAP+E KA
Sbjct: 20 DPLAPKRALSAYMFYVKDKRLEIIQERPELAKEVAQVGKLIGEAWGQLTPAQKAPYEKKA 79
Query: 111 AKRKLDYEKLMTAYNK 126
K+ Y K + Y K
Sbjct: 80 ELDKVRYSKEIEEYRK 95
>gi|281343903|gb|EFB19487.1| hypothetical protein PANDA_011742 [Ailuropoda melanoleuca]
Length = 607
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 51/88 (57%), Gaps = 2/88 (2%)
Query: 37 RSSNKRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWK 96
R S K+ VK K DPN PKRP SA+ ++L R+ K +HP + +++ + K GE WK
Sbjct: 512 RKSRKKPVEVKKGK-DPNAPKRPMSAYMLWLNASREKIKSDHPGI-SITDLSKKAGEIWK 569
Query: 97 SLTDAEKAPFEAKAAKRKLDYEKLMTAY 124
++ +K ++ KA + +YEK M Y
Sbjct: 570 GMSKEKKEEWDRKAEDARREYEKAMKEY 597
>gi|195381983|ref|XP_002049712.1| GJ20604 [Drosophila virilis]
gi|194144509|gb|EDW60905.1| GJ20604 [Drosophila virilis]
Length = 111
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Query: 54 NKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKR 113
++PKRP SA+ ++L E R+ K+E+P K V+ + K GGE W+ L D K +E KA K
Sbjct: 4 DRPKRPLSAYMLWLNENREQIKKENPGSK-VTDIAKRGGELWRGLKD--KTEWEQKAIKM 60
Query: 114 KLDYEKLMTAY 124
K DY K + Y
Sbjct: 61 KEDYNKAVKEY 71
>gi|49250826|gb|AAH74541.1| Ssrp1 protein, partial [Xenopus (Silurana) tropicalis]
Length = 629
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DP+ PKRP SA+ ++L R+ K E+P + +++ + K GE WKS++ +K ++ +A
Sbjct: 537 DPSAPKRPMSAYMLWLNASREKIKSENPGI-SITDLSKKAGEIWKSMSKDKKEEWDRRAE 595
Query: 112 KRKLDYEKLMTAYN 125
+ K DYEK M YN
Sbjct: 596 EAKRDYEKAMKEYN 609
>gi|395821450|ref|XP_003784053.1| PREDICTED: high mobility group protein B1-like [Otolemur garnettii]
Length = 221
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKW 95
KDPN PKRPPSAFF+F E+R K EHP + ++ V K GE W
Sbjct: 90 KDPNVPKRPPSAFFLFCSEYRPKIKGEHPGL-SIGEVAKKLGEMW 133
>gi|255074117|ref|XP_002500733.1| hypothetical protein MICPUN_57400 [Micromonas sp. RCC299]
gi|226515996|gb|ACO61991.1| hypothetical protein MICPUN_57400 [Micromonas sp. RCC299]
Length = 646
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DPN PK+P SA+ +F +E R E+P + +++ V K G +WK++ EK+ FEAKA
Sbjct: 567 DPNAPKKPLSAYIIFTKERRSAVVAENPGL-SLTEVTKELGARWKAIGAEEKSVFEAKAK 625
Query: 112 KRKLDYEKLMTAYNKKQ 128
K K Y M AY Q
Sbjct: 626 KDKERYAVEMEAYEATQ 642
>gi|358255365|dbj|GAA57072.1| high mobility group protein B1, partial [Clonorchis sinensis]
Length = 778
Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 38/105 (36%), Positives = 57/105 (54%), Gaps = 5/105 (4%)
Query: 19 KPVEDRAAGKRKAVLKASRSSNKRTKNVKSAK--KDPNKPKRPPSAFFVFLEEFRKVYKQ 76
K ED AA ++ K +S KS K KDPN PK+ SAFF+F + R K
Sbjct: 597 KKFEDLAAKDKERYRKEMQSYEPPADEGKSRKRKKDPNAPKKALSAFFLFCNDERPKVKA 656
Query: 77 EHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKLDYEKLM 121
+HP+ K VS + K G++W++ + K+ +E++A K YEK +
Sbjct: 657 DHPDWK-VSEIAKELGKRWETCKN--KSKYESQAQVEKQRYEKAL 698
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 39/118 (33%), Positives = 58/118 (49%), Gaps = 3/118 (2%)
Query: 8 GAVKKDKNEVVKPVEDRAAGKRKAVLKASRSSNKRTKNVKSAKKDPNKPKRPPSAFFVFL 67
G + K K + + V R+ + AV R S +R + + KD +KPK + + +FL
Sbjct: 502 GRINKLKKIIAQSVTTRSCNRFVAVSALIRISVRRL--LHTMAKDKSKPKGALTPYALFL 559
Query: 68 EEFRKVYKQEHPNVKA-VSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKLDYEKLMTAY 124
+ K++HP+V K E+WK+LT EK FE AAK K Y K M +Y
Sbjct: 560 QSMHADQKKKHPSVTLDFKTFSKECSEQWKNLTAKEKKKFEDLAAKDKERYRKEMQSY 617
>gi|168021929|ref|XP_001763493.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685286|gb|EDQ71682.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 483
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 52 DPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAA 111
DP +PK P SAFF F + R +E+ K V+ + K GE+WKS++ +++APFE AA
Sbjct: 259 DPLRPKHPISAFFAFSQSRRPALLEEN---KPVTEIAKILGEEWKSMSPSKRAPFEEIAA 315
Query: 112 KRKLDYEKLMTAYNK 126
K K Y + Y K
Sbjct: 316 KEKERYSVELETYKK 330
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 55 KPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRK 114
+ K+P +AF ++ +++R+ +E+PN + + G+KWK++ + E+ P+E + K
Sbjct: 143 RLKKPKTAFLLWCKDYRQKVCEENPNA-TFAEISTILGDKWKNVPEEERKPYEDRYKVEK 201
Query: 115 LDYEKLM 121
Y KL+
Sbjct: 202 NVYLKLV 208
>gi|344299407|ref|XP_003421377.1| PREDICTED: FACT complex subunit SSRP1 [Loxodonta africana]
Length = 709
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 51/88 (57%), Gaps = 2/88 (2%)
Query: 37 RSSNKRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWK 96
R S K+ VK K DPN PKRP SA+ ++L R+ K +HP + +++ + K GE WK
Sbjct: 529 RKSRKKPVEVKKGK-DPNAPKRPMSAYMLWLNASREKIKSDHPGI-SITDLSKKAGEIWK 586
Query: 97 SLTDAEKAPFEAKAAKRKLDYEKLMTAY 124
++ +K ++ KA + +YEK M Y
Sbjct: 587 GMSKEKKEEWDRKAEDARREYEKAMKEY 614
>gi|219116576|ref|XP_002179083.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217409850|gb|EEC49781.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 75
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PK+ ++FF FL E R KQE+P++ + +GK GE +++L+ +K +E A
Sbjct: 1 KDPNAPKKAMTSFFYFLNEMRPKIKQENPDM-SFGELGKKAGELFRALSTNQKEKYEKMA 59
Query: 111 AKRKLDYEKLMTAYN 125
KL +++ M+ YN
Sbjct: 60 KSDKLRFKEEMSKYN 74
>gi|170591488|ref|XP_001900502.1| High mobility group protein 1.2 [Brugia malayi]
gi|158592114|gb|EDP30716.1| High mobility group protein 1.2, putative [Brugia malayi]
Length = 235
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 47 KSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPF 106
K KKDPN PKR SAFF F + R +Q+HP K V V + G WK+L + E+A +
Sbjct: 106 KRVKKDPNAPKRALSAFFFFSHDKRPEVQQQHPEWK-VGQVAQELGRFWKALGEEERAVY 164
Query: 107 EAKAAKRKLDYEKLMTAY 124
E KA + K Y + M Y
Sbjct: 165 ERKALEDKERYAEEMRNY 182
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Query: 44 KNVKSAKKDPNKPKRPPSAFFV--FLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDA 101
+ ++ + K P + K P FFV EE +K Y E NV+ V+ + K EKWK+++D
Sbjct: 17 RRMRESAKPPVRGKTSPYGFFVKMCYEEHKKKYPNE--NVQ-VTEISKKCSEKWKTMSDD 73
Query: 102 EKAPFEAKAAKRKLDYEKLMTAYN 125
EK F A K Y+ + AY
Sbjct: 74 EKRRFFELAQKDAERYQAEVAAYG 97
>gi|296218242|ref|XP_002755324.1| PREDICTED: FACT complex subunit SSRP1 [Callithrix jacchus]
Length = 709
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 51 KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKA 110
KDPN PKRP SA+ ++L R+ K +HP + +++ + K GE WK ++ +K ++ KA
Sbjct: 542 KDPNAPKRPMSAYMLWLNASREKIKSDHPGI-SITDLSKKAGEIWKGMSKEKKEEWDRKA 600
Query: 111 AKRKLDYEKLMTAY 124
+ +YEK M Y
Sbjct: 601 EDARREYEKAMKEY 614
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.309 0.125 0.342
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,852,342,700
Number of Sequences: 23463169
Number of extensions: 64440012
Number of successful extensions: 358781
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1898
Number of HSP's successfully gapped in prelim test: 4459
Number of HSP's that attempted gapping in prelim test: 349780
Number of HSP's gapped (non-prelim): 8646
length of query: 129
length of database: 8,064,228,071
effective HSP length: 95
effective length of query: 34
effective length of database: 10,130,194,312
effective search space: 344426606608
effective search space used: 344426606608
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 71 (32.0 bits)