Query 033037
Match_columns 129
No_of_seqs 149 out of 673
Neff 5.6
Searched_HMMs 29240
Date Mon Mar 25 14:41:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033037.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/033037hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3lac_A Pyrrolidone-carboxylate 100.0 2.4E-30 8.2E-35 202.6 9.5 125 2-127 37-202 (215)
2 4hps_A Pyrrolidone-carboxylate 100.0 2.3E-30 7.9E-35 204.5 9.4 126 2-128 59-225 (228)
3 3ro0_A Pyrrolidone-carboxylate 100.0 2.7E-30 9.4E-35 203.4 9.2 126 2-128 38-203 (223)
4 3giu_A Pyrrolidone-carboxylate 100.0 2.2E-30 7.5E-35 202.9 8.0 124 2-126 38-202 (215)
5 4gxh_A Pyrrolidone-carboxylate 100.0 1.2E-29 4.2E-34 198.7 9.5 125 2-127 38-203 (216)
6 1a2z_A Pyrrolidone carboxyl pe 100.0 1.2E-29 4.2E-34 199.3 9.4 125 2-127 37-207 (220)
7 1iu8_A Pyrrolidone-carboxylate 100.0 1.3E-29 4.3E-34 197.3 8.9 125 2-127 33-198 (206)
8 2ebj_A Pyrrolidone carboxyl pe 100.0 9E-30 3.1E-34 196.3 6.5 120 2-124 34-191 (192)
9 1x10_A Pyrrolidone-carboxylate 100.0 4.3E-29 1.5E-33 194.4 9.8 126 2-128 36-206 (208)
10 3tva_A Xylose isomerase domain 40.8 1E+02 0.0036 22.5 7.4 73 54-127 52-146 (290)
11 3qc0_A Sugar isomerase; TIM ba 39.1 76 0.0026 22.8 6.0 75 52-127 44-130 (275)
12 2eo1_A OBSCN protein, cDNA FLJ 38.9 11 0.00036 23.2 1.1 27 72-106 75-101 (102)
13 4a4j_A Pacszia, cation-transpo 37.8 45 0.0015 18.8 3.8 21 51-71 48-68 (69)
14 2fi0_A Conserved domain protei 34.7 33 0.0011 21.7 2.9 30 31-70 49-78 (81)
15 2e7b_A Obscurin; IG-like domai 34.3 13 0.00046 22.8 1.0 27 73-107 73-99 (103)
16 2y9j_Y Lipoprotein PRGK, prote 29.6 1.3E+02 0.0044 21.7 5.8 80 49-128 3-96 (170)
17 1dd5_A Ribosome recycling fact 28.9 1.7E+02 0.0057 21.7 6.4 50 46-119 63-115 (185)
18 1wqg_A Ribosome recycling fact 27.6 1.1E+02 0.0038 22.7 5.2 48 48-119 65-115 (185)
19 3abf_A 4-oxalocrotonate tautom 27.5 61 0.0021 18.5 3.1 29 100-128 3-31 (64)
20 3kgk_A Arsenical resistance op 27.4 1.2E+02 0.0042 20.7 5.0 49 53-101 27-78 (110)
21 1ise_A Ribosome recycling fact 27.2 1.2E+02 0.0041 22.5 5.4 48 48-119 65-115 (185)
22 3iwl_A Copper transport protei 27.0 82 0.0028 17.9 3.7 28 44-71 37-64 (68)
23 3ktb_A Arsenical resistance op 26.7 1.1E+02 0.0038 20.8 4.7 50 53-102 30-82 (106)
24 3ngf_A AP endonuclease, family 26.5 1.8E+02 0.0063 21.0 8.0 74 53-127 48-138 (269)
25 1eh1_A Ribosome recycling fact 24.9 1.6E+02 0.0054 21.8 5.7 50 44-117 62-114 (185)
26 3m20_A 4-oxalocrotonate tautom 24.9 78 0.0027 18.3 3.3 27 101-128 3-29 (62)
27 1is1_A Ribosome recycling fact 24.9 1.2E+02 0.0041 22.5 5.0 47 49-119 66-115 (185)
28 3cjk_B Copper-transporting ATP 24.6 45 0.0015 18.8 2.1 26 52-77 50-75 (75)
29 1otf_A 4-oxalocrotonate tautom 24.4 53 0.0018 18.5 2.4 29 100-128 2-30 (62)
30 3m21_A Probable tautomerase HP 24.3 59 0.002 19.1 2.7 29 100-128 2-33 (67)
31 1jhl_L IGG1-kappa D11.15 FV (l 24.2 16 0.00054 22.9 -0.1 11 73-83 81-91 (108)
32 1taf_B TFIID TBP associated fa 23.3 54 0.0019 20.7 2.4 43 49-92 3-45 (70)
33 2k1m_A Myosin-binding protein 23.3 17 0.00057 22.1 -0.1 10 73-82 73-82 (95)
34 1qfw_M FV, antibody (anti beta 23.2 17 0.00058 22.9 -0.1 11 73-83 81-91 (108)
35 4gjt_B Poliovirus receptor-rel 22.8 17 0.00058 23.6 -0.1 10 73-82 90-99 (123)
36 2or8_A Hepatitis A virus cellu 22.6 12 0.0004 23.6 -1.0 10 73-82 83-92 (116)
37 2opa_A Probable tautomerase YW 22.5 61 0.0021 18.3 2.4 29 100-128 2-30 (61)
38 2dku_A KIAA1556 protein; beta- 22.0 18 0.00062 22.1 -0.1 10 72-81 72-81 (103)
39 1tzy_D Histone H4-VI; histone- 22.0 1.2E+02 0.0042 20.0 4.1 39 53-92 30-68 (103)
40 2dm7_A KIAA1556 protein; beta- 21.9 18 0.00063 22.3 -0.1 26 73-106 72-97 (108)
41 2edj_A Roundabout homolog 2; K 21.7 18 0.00063 21.9 -0.1 11 72-82 71-81 (100)
42 2yfw_B Histone H4, H4; cell cy 21.6 1.2E+02 0.0042 20.0 4.1 39 53-92 30-68 (103)
43 4ham_A LMO2241 protein; struct 21.5 30 0.001 23.5 0.9 30 51-81 51-80 (134)
44 2bkr_A Sentrin-specific protea 21.5 22 0.00074 26.1 0.2 20 72-91 160-179 (212)
45 2f8n_G Core histone macro-H2A. 21.3 80 0.0027 21.8 3.2 42 51-92 21-62 (120)
46 2oyp_A Hepatitis A virus cellu 21.1 13 0.00044 22.9 -1.0 10 73-82 82-91 (109)
47 2eny_A Obscurin; beta-sandwich 21.1 20 0.00069 22.5 -0.0 28 72-107 74-101 (104)
48 1eaj_A Coxsackie virus and ade 21.0 13 0.00044 23.0 -1.0 10 73-82 99-108 (126)
49 1k8r_B Protein kinase BYR2; si 20.9 88 0.003 21.4 3.2 34 46-80 12-52 (110)
50 2q87_A CMRF35-H antigen; all-b 20.9 13 0.00045 23.4 -1.0 31 73-105 78-108 (110)
51 3ry0_A Putative tautomerase; o 20.8 68 0.0023 18.7 2.4 29 100-128 2-30 (65)
52 3udw_C Poliovirus receptor; PV 20.8 13 0.00045 22.9 -1.0 10 73-82 89-98 (118)
53 4ety_A LAIR-1, mlair1, leukocy 20.6 8.6 0.00029 26.1 -2.0 11 72-82 72-82 (118)
54 1neu_A Myelin P0 protein; stru 20.4 14 0.00047 23.4 -1.0 12 73-84 91-102 (124)
55 1u3h_A T-cell receptor alpha-c 25.8 21 0.00073 22.5 0.0 13 73-85 81-93 (110)
56 2yr3_A Myosin light chain kina 20.4 21 0.00071 21.6 -0.1 10 73-82 74-83 (99)
57 2yuv_A Myosin-binding protein 20.3 20 0.0007 21.9 -0.1 11 72-82 72-82 (100)
58 2edf_A Obscurin; beta-sandwich 20.3 21 0.00071 21.8 -0.1 12 73-84 73-84 (103)
No 1
>3lac_A Pyrrolidone-carboxylate peptidase; alpha beta class, three layer sandwich, hydrolase, protease, thiol protease, structural genomics; 2.00A {Bacillus anthracis}
Probab=99.96 E-value=2.4e-30 Score=202.57 Aligned_cols=125 Identities=22% Similarity=0.378 Sum_probs=105.6
Q ss_pred cccCCCCCccccchHHHHHHh-----------hCCCCchhHHHHhh-hhcC----C-------------CCCCcceEEec
Q 033037 2 LKEEGLPAGVTLGSCTVLEAA-----------GDGALPTLLKTLES-SISQ----T-------------NTNNEQVIWTS 52 (129)
Q Consensus 2 ~~k~~lP~~~~l~s~~vl~~~-----------G~a~~r~~~~t~E~-~i~~----~-------------~~~~~~~~~T~ 52 (129)
+.++.||+.+......+.+.+ ||+++|.. +++|+ |+|. . ..+|+.+|||+
T Consensus 37 i~~~~lPv~y~~~~~~l~~~~~~~~Pd~VihvG~aggr~~-i~lEr~A~N~~d~~~pDn~G~~P~~~~i~~~Gp~~~~s~ 115 (215)
T 3lac_A 37 IISKQVPTVFHKSISVLKEYIEELAPEFIICIGQAGGRPD-ITIERVAINIDDARIADNEGNQPVDVPVVEEGPAAYWST 115 (215)
T ss_dssp EEEEEECSSTTHHHHHHHHHHHHHCCSEEEEEEECTTCSS-EEEECEEESCBCCSSCCTTSCCCSSBCSSTTSCSEEECC
T ss_pred EEEEEEeeEhHHHHHHHHHHHHhhCCCeEEEeccCCCCce-EEEEEEEeccCCCcCCCcCCCCCCCCcCcCCCCceeecC
Confidence 456789999888665554444 99999998 99999 6763 1 12788999999
Q ss_pred CcHHHHHHHHHhcCCceEecCCCChhhhhHHHHHHHHHhhhc--CCceEEEEeCCCC----------CCChHHHHHHHHH
Q 033037 53 LSTEAILKFLKKKGFDVVISDDAGRFVCNYVYYHSLRFAEQK--GHKSLFVHVPLFS----------TIDEDTQMQFVAT 120 (129)
Q Consensus 53 lp~~~l~~~l~~~g~~~~~S~dAG~ylCN~iyY~sL~~~~~~--~~~~~FVHVP~~~----------~~~~e~~~~~v~~ 120 (129)
+|+++|+++|+++|+|+++|+|||+|||||+||+||++.+++ +.+++|||||+++ .++.+++.+.+..
T Consensus 116 Lpv~~~v~~l~~~gipa~vS~dAG~yvCN~i~Y~sL~~~~~~~~~~~~gFIHVP~~~~q~~~~~~~p~m~~~~~~~al~~ 195 (215)
T 3lac_A 116 LPMKAIVKKLQEEGIPASVSQTAGTFVCNHLFYGLMHELEKHDTKMKGGFIHIPFLPEQASNYPGQPSMSLSTIRKGIEL 195 (215)
T ss_dssp SCHHHHHHHHHHTTCCEEEESCCCSSHHHHHHHHHHHHHGGGTTSSEEEEEEECCCHHHHTTSTTCCCCCHHHHHHHHHH
T ss_pred CCHHHHHHHHHhCCCcEEEcCCCCccccHHHHHHHHHHHHhcCCCceEEEEEeCCChHHhccCCCCCCCCHHHHHHHHHH
Confidence 999999999999999999999999999999999999998755 5789999999986 4577888888888
Q ss_pred HHHHHHh
Q 033037 121 LFEAVAS 127 (129)
Q Consensus 121 li~~la~ 127 (129)
.|+++.+
T Consensus 196 ~i~~~~~ 202 (215)
T 3lac_A 196 AVEVTTT 202 (215)
T ss_dssp HHHHHTT
T ss_pred HHHHHHh
Confidence 8887764
No 2
>4hps_A Pyrrolidone-carboxylate peptidase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, hydrolase; 1.55A {Xenorhabdus bovienii} PDB: 4gxh_A
Probab=99.96 E-value=2.3e-30 Score=204.49 Aligned_cols=126 Identities=21% Similarity=0.298 Sum_probs=106.6
Q ss_pred cccCCCCCccccchHHHHHHh-----------hCCCCchhHHHHhh-hhcC----C-------------CCCCcceEEec
Q 033037 2 LKEEGLPAGVTLGSCTVLEAA-----------GDGALPTLLKTLES-SISQ----T-------------NTNNEQVIWTS 52 (129)
Q Consensus 2 ~~k~~lP~~~~l~s~~vl~~~-----------G~a~~r~~~~t~E~-~i~~----~-------------~~~~~~~~~T~ 52 (129)
+.++.||+.+......+.+.+ ||+++|+. +++|+ |+|. . ..+|+.+|+|+
T Consensus 59 i~~~~lPv~y~~~~~~l~~~i~~~~Pd~VihvG~aggr~~-i~lEr~A~N~~d~~~pDn~G~~P~~~~i~~~Gp~a~~st 137 (228)
T 4hps_A 59 IEICQIPCIFDTSLEHLYAAVDKYQPELVISVGQAGGRTN-ITVERVAININDARIPDNAGNQPIDTPVIVDGPAAYFSR 137 (228)
T ss_dssp EEEEEECSSTTHHHHHHHHHHHHHCCSEEEEEEECTTCSS-EEEECEEESCEECSSCCTTSCCCEEECSSTTCCSEEECC
T ss_pred EEEEEcceEeHHHHHHHHHHHHhhCCCEEEEeccCCCCce-EEEEEEEeccCCCCCCCcCCCCCCCCcCcCCCCceeeeC
Confidence 356789999988666554444 99999999 99999 6773 1 12788999999
Q ss_pred CcHHHHHHHHHhcCCceEecCCCChhhhhHHHHHHHHHhhhc--CCceEEEEeCCCCC----------CChHHHHHHHHH
Q 033037 53 LSTEAILKFLKKKGFDVVISDDAGRFVCNYVYYHSLRFAEQK--GHKSLFVHVPLFST----------IDEDTQMQFVAT 120 (129)
Q Consensus 53 lp~~~l~~~l~~~g~~~~~S~dAG~ylCN~iyY~sL~~~~~~--~~~~~FVHVP~~~~----------~~~e~~~~~v~~ 120 (129)
+|+++|+++|+++|+|+++|+|||+|||||+||+||++..++ +.+++|||||++++ ++.+++.+.+..
T Consensus 138 Lpvk~~v~~l~~~Gipa~vS~dAGtYvCN~iyY~sL~~~~~~~~~~~~gFIHVP~l~eq~~~~~~~psmsl~~~~~al~~ 217 (228)
T 4hps_A 138 LPIKTMVNALNTAGIPASVSQTAGTFVCNHVMYGLLHYLAQNTPSVRGGFIHVPYLPEQAVKDGNQSSMTLMLMTLALKI 217 (228)
T ss_dssp SCHHHHHHHHHHTTCCEEEESCCCSSHHHHHHHHHHHHHHHHCTTSEEEEEEECCCGGGGCSSSCCCCCCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHcCCcEEEeCCCCcchhHHHHHHHHHHHHhcCCCceEEEEEcCCchHhhccCCCCCCCCHHHHHHHHHH
Confidence 999999999999999999999999999999999999998654 57999999999985 666788888888
Q ss_pred HHHHHHhh
Q 033037 121 LFEAVAST 128 (129)
Q Consensus 121 li~~la~~ 128 (129)
.|+++.+.
T Consensus 218 ~i~~~~~~ 225 (228)
T 4hps_A 218 AIETAWKN 225 (228)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHhc
Confidence 88887653
No 3
>3ro0_A Pyrrolidone-carboxylate peptidase; hydrolase-hydrolase inhibitor complex; HET: TPT; 1.50A {Bacillus amyloliquefaciens} SCOP: c.56.4.1 PDB: 3rnz_A* 1aug_A
Probab=99.96 E-value=2.7e-30 Score=203.44 Aligned_cols=126 Identities=22% Similarity=0.339 Sum_probs=105.7
Q ss_pred cccCCCCCccccchHHHHHHh-----------hCCCCchhHHHHhh-hhcC----CC-------------CCCcceEEec
Q 033037 2 LKEEGLPAGVTLGSCTVLEAA-----------GDGALPTLLKTLES-SISQ----TN-------------TNNEQVIWTS 52 (129)
Q Consensus 2 ~~k~~lP~~~~l~s~~vl~~~-----------G~a~~r~~~~t~E~-~i~~----~~-------------~~~~~~~~T~ 52 (129)
+.++.||+.+......+.+.+ ||+++|+. +++|+ |+|. .+ .+|+.+|||+
T Consensus 38 i~~~~lPv~y~~~~~~l~~~i~~~~Pd~VihvG~aggr~~-i~lEr~A~N~~d~ripDn~G~~P~d~~i~~~Gp~a~~st 116 (223)
T 3ro0_A 38 IVSEQVPTVFYKSLAVLREAMKKHQPDIIICVGQAGGRMQ-ITPERVAINLNEARIPDNEGNQPVGEDISQGGPAAYWTG 116 (223)
T ss_dssp EEEEEECSCTTHHHHHHHHHHHHHCCSEEEEEEECTTCCS-BEEBSEEESCBCCSSCCTTSCCCCSBCSSTTSCSEEECC
T ss_pred EEEEEeeeEehhHHHHHHHHHHHhCCCEEEEeccCCCCce-EEEEEEEecCCCCCCCCCCCCCCCCCCCcCCCCceeecC
Confidence 456789999988665555444 99999999 99999 6763 11 2788999999
Q ss_pred CcHHHHHHHHHhcCCceEecCCCChhhhhHHHHHHHHHhhhc--CCceEEEEeCCCCC---------CChHHHHHHHHHH
Q 033037 53 LSTEAILKFLKKKGFDVVISDDAGRFVCNYVYYHSLRFAEQK--GHKSLFVHVPLFST---------IDEDTQMQFVATL 121 (129)
Q Consensus 53 lp~~~l~~~l~~~g~~~~~S~dAG~ylCN~iyY~sL~~~~~~--~~~~~FVHVP~~~~---------~~~e~~~~~v~~l 121 (129)
+|+++|+++|+++|+|+++|+|||+|||||+||+||++.+++ +.+++|||||++++ ++.+++.+.+...
T Consensus 117 Lpv~~~v~~l~~~gipa~vS~dAG~yvCN~iyY~sL~~~~~~~~~~~~gFIHVP~l~eq~~~~~~psm~~~~~~~al~~~ 196 (223)
T 3ro0_A 117 LPIKRIVEEIKKEGIPAAVSYTAGTFVCNHLFYGLMDEISRHHPHIRGGFIHIPYIPEQTLQKSAPSLSLDHITKALKIA 196 (223)
T ss_dssp SCHHHHHHHHHHTTCCBCCBSCCCSSHHHHHHHHHHHHHHHHCTTCEEEEEEECBCGGGCSSSCCCBCCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHCCCCEEEeCCCCcccchHHHHHHHHHHHhcCCCceEEEEEeCCChHHhccCCCCCCCHHHHHHHHHHH
Confidence 999999999999999999999999999999999999998754 57899999999953 5667788888888
Q ss_pred HHHHHhh
Q 033037 122 FEAVAST 128 (129)
Q Consensus 122 i~~la~~ 128 (129)
|+++.+.
T Consensus 197 i~~~~~~ 203 (223)
T 3ro0_A 197 AVTAAAH 203 (223)
T ss_dssp HHHHHHC
T ss_pred HHHHHhh
Confidence 8877653
No 4
>3giu_A Pyrrolidone-carboxylate peptidase; IDP00836, hydrolase, PROT thiol protease, structural genomics; HET: MSE PG4; 1.25A {Staphylococcus aureus subsp} SCOP: c.56.4.0
Probab=99.96 E-value=2.2e-30 Score=202.89 Aligned_cols=124 Identities=19% Similarity=0.322 Sum_probs=103.5
Q ss_pred cccCCCCCccccchHHHHHHh-----------hCCCCchhHHHHhh-hhcC----C-------------CCCCcceEEec
Q 033037 2 LKEEGLPAGVTLGSCTVLEAA-----------GDGALPTLLKTLES-SISQ----T-------------NTNNEQVIWTS 52 (129)
Q Consensus 2 ~~k~~lP~~~~l~s~~vl~~~-----------G~a~~r~~~~t~E~-~i~~----~-------------~~~~~~~~~T~ 52 (129)
+.++.||+.+......+.+.+ ||+++|.. +++|+ |+|. . ..+|+.+|||+
T Consensus 38 i~~~~lPv~~~~~~~~l~~~i~~~~Pd~Vi~vG~a~gr~~-i~lEr~A~N~~~~~~pDn~G~~p~~~~i~~~gp~~~~st 116 (215)
T 3giu_A 38 IDKLKLPTSFKKVDNIINKTLASNHYDVVLAIGQAGGRNA-ITPERVAINIDDARIPDNDDFQPIDQAIHLDGAPAYFSN 116 (215)
T ss_dssp EEEEEECSCHHHHHHHHHHHHHHSCCSEEEEEEECTTCCS-BEEBCEEESCEECSSCCTTSCCCEEECSCTTSCSEEECC
T ss_pred EEEEEeceehHhHHHHHHHHHHHhCCCEEEEeccCCCCce-EEEEEEEeccCCCCCCCCCCCCCCCCcccCCCccccccC
Confidence 356789999888655555444 99999998 99999 6763 1 12788999999
Q ss_pred CcHHHHHHHHHhcCCceEecCCCChhhhhHHHHHHHHHhhhc--CCceEEEEeCCCCC----------CChHHHHHHHHH
Q 033037 53 LSTEAILKFLKKKGFDVVISDDAGRFVCNYVYYHSLRFAEQK--GHKSLFVHVPLFST----------IDEDTQMQFVAT 120 (129)
Q Consensus 53 lp~~~l~~~l~~~g~~~~~S~dAG~ylCN~iyY~sL~~~~~~--~~~~~FVHVP~~~~----------~~~e~~~~~v~~ 120 (129)
+|+++|+++|+++|+|+++|+|||+|||||+||+||++.+++ +.+++|||||++++ ++.+++.+.+..
T Consensus 117 Lpv~~iv~~l~~~gipa~vS~dAG~yvCN~i~Y~sL~~~~~~~~~~~~gFIHVP~~~eq~~~~~~~psm~~~~~~~al~~ 196 (215)
T 3giu_A 117 LPVKAMTQSIINQGLPGALSNSAGTFVCNHTLYHLGYLQDKHYPHLRFGFIHVPYIPEQVIGKPDTPSMPLEKIVAGLTA 196 (215)
T ss_dssp SCHHHHHHHHHHTTCCBCCBSCCCSSHHHHHHHHHHHHHHHTCTTCEEEEEEECCCGGGGTTCTTCCCCCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHcCCCEEEeCCCCccccHHHHHHHHHHHHhcCCCceEEEEEeCCCHHHhccCCCCCCCCHHHHHHHHHH
Confidence 999999999999999999999999999999999999998764 57899999999954 566777777777
Q ss_pred HHHHHH
Q 033037 121 LFEAVA 126 (129)
Q Consensus 121 li~~la 126 (129)
.|+++.
T Consensus 197 ~i~~~~ 202 (215)
T 3giu_A 197 AIEAIS 202 (215)
T ss_dssp HHHTCC
T ss_pred HHHHHh
Confidence 777653
No 5
>4gxh_A Pyrrolidone-carboxylate peptidase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, hydrolase; 2.70A {Xenorhabdus bovienii}
Probab=99.96 E-value=1.2e-29 Score=198.68 Aligned_cols=125 Identities=21% Similarity=0.299 Sum_probs=102.4
Q ss_pred cccCCCCCccccchHHHHHHh-----------hCCCCchhHHHHhh-hhcC----C-------------CCCCcceEEec
Q 033037 2 LKEEGLPAGVTLGSCTVLEAA-----------GDGALPTLLKTLES-SISQ----T-------------NTNNEQVIWTS 52 (129)
Q Consensus 2 ~~k~~lP~~~~l~s~~vl~~~-----------G~a~~r~~~~t~E~-~i~~----~-------------~~~~~~~~~T~ 52 (129)
+.++.||+.+......+.+.+ |++++|+. +++|+ |+|. . ..+|+..|||+
T Consensus 38 i~~~~lPv~~~~~~~~l~~~i~~~~Pd~vi~~G~a~gr~~-i~~Er~A~N~~~~r~pDn~G~~p~~~~i~~~gp~~~~t~ 116 (216)
T 4gxh_A 38 IEICQIPCIFDTSLEHLYAAVDKYQPELVISVGQAGGRTN-ITVERVAININDARIPDNAGNQPIDTPVIVDGPAAYFSR 116 (216)
T ss_dssp EEEEEECSSTTHHHHHHHHHHHHHCCSEEEEEEECTTCSS-EEEECEEESCBCCSSCCTTSCCCCSBCSSTTCCSEEECC
T ss_pred EEEEecCccHHHHHHHHHHHHHhhCCCEEEEeccCCCCCc-ceeEEEEcccCcccCCccCCCCCCCCcccCCCchheecC
Confidence 356678998877666555544 99999999 99999 6764 1 12789999999
Q ss_pred CcHHHHHHHHHhcCCceEecCCCChhhhhHHHHHHHHHhhhc--CCceEEEEeCCCCC----------CChHHHHHHHHH
Q 033037 53 LSTEAILKFLKKKGFDVVISDDAGRFVCNYVYYHSLRFAEQK--GHKSLFVHVPLFST----------IDEDTQMQFVAT 120 (129)
Q Consensus 53 lp~~~l~~~l~~~g~~~~~S~dAG~ylCN~iyY~sL~~~~~~--~~~~~FVHVP~~~~----------~~~e~~~~~v~~ 120 (129)
+|+++|+++|+++|+|+++|+|||+|||||+||++|++.+++ +.+++|||||++++ ++.+++.+.+..
T Consensus 117 Lpv~~iv~~l~~~gipa~vS~dAG~ylCN~i~Y~sL~~~~~~~~~~~~gFIHVP~lpeq~~~~~~~psm~l~~~~~al~~ 196 (216)
T 4gxh_A 117 LPIKTMVNALNTAGIPASVSQTAGTFVCNHVMYGLLHYLAQNTPSVRGGFIHVPYLPEQAVKDGNQSSMTLMLMTLALKI 196 (216)
T ss_dssp SCHHHHHHHHHHTTCCEEEESCCCSSHHHHHHHHHHHHHHHHCTTSEEEEEEECBCHHHHHHHSSCCBCCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHCCCCEEEeCCCcccHHHHHHHHHHHHHHHcCCCCeEEEEEcCCChHhhccCCCCCCCCHHHHHHHHHH
Confidence 999999999999999999999999999999999999998755 57899999998854 344566677777
Q ss_pred HHHHHHh
Q 033037 121 LFEAVAS 127 (129)
Q Consensus 121 li~~la~ 127 (129)
.|++.++
T Consensus 197 ~i~~~~~ 203 (216)
T 4gxh_A 197 AIETAWK 203 (216)
T ss_dssp HHHHHHH
T ss_pred HHHHHHc
Confidence 7776554
No 6
>1a2z_A Pyrrolidone carboxyl peptidase; N-pyroglutamate hydrolysis; 1.73A {Thermococcus litoralis} SCOP: c.56.4.1
Probab=99.96 E-value=1.2e-29 Score=199.25 Aligned_cols=125 Identities=22% Similarity=0.353 Sum_probs=103.8
Q ss_pred cccCCCCCccccchHHHHHHh-----------hCCCCchhHHHHhh-hhcC-C----------------CCCCcceEEec
Q 033037 2 LKEEGLPAGVTLGSCTVLEAA-----------GDGALPTLLKTLES-SISQ-T----------------NTNNEQVIWTS 52 (129)
Q Consensus 2 ~~k~~lP~~~~l~s~~vl~~~-----------G~a~~r~~~~t~E~-~i~~-~----------------~~~~~~~~~T~ 52 (129)
+.++.||+.+......+.+.+ ||+++|+. +++|+ |+|. . ..+|+.+|||+
T Consensus 37 i~~~~lPv~~~~~~~~l~~~i~~~~Pd~Vi~vG~aggr~~-i~lEr~A~N~~~~~~pDn~G~~p~~~~i~~~gp~~~~tt 115 (220)
T 1a2z_A 37 VYGRVLPVSVKRATIELKRYLEEIKPEIVINLGLAPTYSN-ITVERIAVNIIDARIPDNDGYQPIDEKIEEDAPLAYMAT 115 (220)
T ss_dssp EEEEEECSCHHHHHHHHHHHHHHHCCSEEEEEEECTTCSS-EEEECEEESCBCCSSCCTTSCCCSSBCSCTTSCSEEECC
T ss_pred EEEEEEEeEHHHHHHHHHHHHHHhCCCEEEEecCCCCCce-EEEEEEEccCCCCCcCCCCCCCCCCCCccCCCCceeEcC
Confidence 346678998887555444433 99999999 99999 6764 1 12788899999
Q ss_pred CcHHHHHHHHHhcCCceEecCCCChhhhhHHHHHHHHHhhhc--CCceEEEEeCCCCC---------------CChHHHH
Q 033037 53 LSTEAILKFLKKKGFDVVISDDAGRFVCNYVYYHSLRFAEQK--GHKSLFVHVPLFST---------------IDEDTQM 115 (129)
Q Consensus 53 lp~~~l~~~l~~~g~~~~~S~dAG~ylCN~iyY~sL~~~~~~--~~~~~FVHVP~~~~---------------~~~e~~~ 115 (129)
+|+++|+++|+++|+|+++|+|||+|||||+||+||++.+++ +.+++|||||++++ ++.+++.
T Consensus 116 Lpi~~iv~~l~~~gip~~vS~~AG~ylCN~i~Y~sL~~~~~~~~~~~~gFIHVP~l~~~~~~~~~~~~~~~p~ms~e~~~ 195 (220)
T 1a2z_A 116 LPVRAITKTLRDNGIPATISYSAGTYLCNYVMFKTLHFSKIEGYPLKAGFIHVPYTPDQVVNKFFLLGKNTPSMCLEAEI 195 (220)
T ss_dssp SCHHHHHHHHHHTTCCEEEESCCCSSHHHHHHHHHHHHHHHHCCCSEEEEEEECCCGGGGTTCEEETTEECCCCCHHHHH
T ss_pred CCHHHHHHHHHHCCCCEEEeCCCCcchhhHHHHHHHHHHHhccCCceeEEEEeCCChhhhhhhccccCCCCCCCCHHHHH
Confidence 999999999999999999999999999999999999999765 78999999999883 5567777
Q ss_pred HHHHHHHHHHHh
Q 033037 116 QFVATLFEAVAS 127 (129)
Q Consensus 116 ~~v~~li~~la~ 127 (129)
+.+...|+++.+
T Consensus 196 ~al~~~i~~~~~ 207 (220)
T 1a2z_A 196 KAIELAVKVSLD 207 (220)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 777777777654
No 7
>1iu8_A Pyrrolidone-carboxylate peptidase; hydrolase, thiol protease, complete proteome; 1.60A {Pyrococcus horikoshii} SCOP: c.56.4.1
Probab=99.96 E-value=1.3e-29 Score=197.27 Aligned_cols=125 Identities=22% Similarity=0.356 Sum_probs=102.9
Q ss_pred cccCCCCCccccchHHHHHHh-----------hCCCCchhHHHHhh-hhcC----C-------------CCCCcceEEec
Q 033037 2 LKEEGLPAGVTLGSCTVLEAA-----------GDGALPTLLKTLES-SISQ----T-------------NTNNEQVIWTS 52 (129)
Q Consensus 2 ~~k~~lP~~~~l~s~~vl~~~-----------G~a~~r~~~~t~E~-~i~~----~-------------~~~~~~~~~T~ 52 (129)
+.++.||+.+......+-+.+ ||+++|+. +++|+ |+|. . ..+|+.+|||+
T Consensus 33 i~~~~lPv~~~~~~~~l~~~~~~~~Pd~vi~vG~a~gr~~-i~~Er~A~N~~~~~~pDn~G~~p~~~~i~~~gp~~~~t~ 111 (206)
T 1iu8_A 33 VVGEILPVSFKRAREKLLKVLDDVRPDITINLGLAPGRTH-ISVERVAVNMIDARIPDNDGEQPKDEPIVEGGPAAYFAT 111 (206)
T ss_dssp EEEEEECSCHHHHHHHHHHHHHHHCCSEEEEEEECTTCSS-EEEECEEESCEECSSCCTTSCCCEEECSSTTCCSEEECC
T ss_pred EEEEEEEeEHHHHHHHHHHHHHHhCCCEEEEcccCCCCce-EEEEEEEecCCCCccCCCCCCCCCCCceeCCCCceeEcC
Confidence 456788999888544443333 99999999 99999 6774 1 12788999999
Q ss_pred CcHHHHHHHHHhcCCceEecCCCChhhhhHHHHHHHHHhhhc--CCceEEEEeCCCC----------CCChHHHHHHHHH
Q 033037 53 LSTEAILKFLKKKGFDVVISDDAGRFVCNYVYYHSLRFAEQK--GHKSLFVHVPLFS----------TIDEDTQMQFVAT 120 (129)
Q Consensus 53 lp~~~l~~~l~~~g~~~~~S~dAG~ylCN~iyY~sL~~~~~~--~~~~~FVHVP~~~----------~~~~e~~~~~v~~ 120 (129)
+|+++|+++|+++|+|+++|+|||+|||||+||++|++.+++ +.+++|||||+++ .++.|++.+.+..
T Consensus 112 Lpi~~iv~~l~~~gip~~vS~~AG~ylCN~i~Y~sL~~~~~~~~~~~~gFIHVP~~~~~~~~~~~~p~~~~~~~~~al~~ 191 (206)
T 1iu8_A 112 IPTREIVEEMKKNGIPAVLSYTAGTYLCNFAMYLTLHTSATKGYPKIAGFIHVPYTPDQVLEKKNTPSMSLDLEIKGVEI 191 (206)
T ss_dssp SCHHHHHHHHHHTTCCEEEESCCCSSHHHHHHHHHHHHHHHHCCSSEEEEEEECBCGGGCTTCTTCCBCCHHHHHHHHHH
T ss_pred CCHHHHHHHHHhCCCCEEEeCCCCccHhhHHHHHHHHHHHhccCCCceEEEEcCCChhhhcccCCCCCCCHHHHHHHHHH
Confidence 999999999999999999999999999999999999999753 3399999999988 3566777777777
Q ss_pred HHHHHHh
Q 033037 121 LFEAVAS 127 (129)
Q Consensus 121 li~~la~ 127 (129)
.|+++.+
T Consensus 192 ~i~~~~~ 198 (206)
T 1iu8_A 192 AIRVAQS 198 (206)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7777654
No 8
>2ebj_A Pyrrolidone carboxyl peptidase; TTHA08 degradation of proteins and peptides, structural genomics; 1.90A {Thermus thermophilus}
Probab=99.96 E-value=9e-30 Score=196.29 Aligned_cols=120 Identities=22% Similarity=0.256 Sum_probs=97.8
Q ss_pred cccCCCCCccccchHHHHHHh-----------hCCCCchhHHHHhh-hhcC----C-------------CCCCcceEEec
Q 033037 2 LKEEGLPAGVTLGSCTVLEAA-----------GDGALPTLLKTLES-SISQ----T-------------NTNNEQVIWTS 52 (129)
Q Consensus 2 ~~k~~lP~~~~l~s~~vl~~~-----------G~a~~r~~~~t~E~-~i~~----~-------------~~~~~~~~~T~ 52 (129)
+.++.||+. ......+-+.+ ||+++|+. +++|+ |+|. . ..+|+.+|||+
T Consensus 34 i~~~~lPv~-~~~~~~l~~~~~~~~pd~vi~~G~a~~r~~-i~~Er~A~N~~~~~~pDn~G~~p~~~~i~~~gp~~~~t~ 111 (192)
T 2ebj_A 34 LRKAVLPVD-AEALGEALEDLHREGPKAVLHLGLAEDRPV-LTLERLAVNLLDFPRPDNRGRVLEDLPIVPGGPLALPAR 111 (192)
T ss_dssp EEEEEECSC-HHHHHHHHHHHHTTCCSEEEEEEECTTCSS-EEEECEEESCBCCSSCCTTCCCCCSBCSSTTSCSEEECB
T ss_pred EEEEEeccc-ccHHHHHHHHHHHhCCCEEEEeccCCCCce-EEeEEEEEcCCCccCCCCCCCCCCCCceeCCCCceeEcC
Confidence 346678888 65444443333 99999998 99999 6773 1 12788999999
Q ss_pred CcHHHHHHHHHhcCCceEecCCCChhhhhHHHHHHHHHhhhcCCceEEEEeCCCCC---------CChHHHHHHHHHHHH
Q 033037 53 LSTEAILKFLKKKGFDVVISDDAGRFVCNYVYYHSLRFAEQKGHKSLFVHVPLFST---------IDEDTQMQFVATLFE 123 (129)
Q Consensus 53 lp~~~l~~~l~~~g~~~~~S~dAG~ylCN~iyY~sL~~~~~~~~~~~FVHVP~~~~---------~~~e~~~~~v~~li~ 123 (129)
+|+++|+++++++|+|+++|+|||+|||||+||++|++.+ .+.+++|||||++++ ++.|++.+.+...|+
T Consensus 112 lp~~~iv~~l~~~g~p~~vS~~AG~ylCN~i~Y~sL~~~~-~~~~~gFIHVP~~~~~~~~~~~p~~~~e~~~~al~~~i~ 190 (192)
T 2ebj_A 112 FPVKPVLARWREAGIPGRPSLSAGSYLCNQAFYLSLYRLP-EEVPVGFLHLPPDETLALKRPRPYVPLEVQARAVRLALE 190 (192)
T ss_dssp SCHHHHHHHHHHTTCCEEEESCCCSSHHHHHHHHHHHHSC-TTSCEEEEEECCCHHHHHHSCCCCCCHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHCCCCEEEeCCCCccHHHHHHHHHHHhcc-CCCceEEEEeCCChhhhcccCCCCCCHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999986 568999999999875 566666666666665
Q ss_pred H
Q 033037 124 A 124 (129)
Q Consensus 124 ~ 124 (129)
+
T Consensus 191 ~ 191 (192)
T 2ebj_A 191 H 191 (192)
T ss_dssp T
T ss_pred h
Confidence 4
No 9
>1x10_A Pyrrolidone-carboxylate peptidase; stability of protein, hydrolase; 2.00A {Pyrococcus furiosus} PDB: 1z8t_A 1z8x_A 1ioi_A 1x12_A 1z8w_A 2eo8_A 1iof_A 2df5_A
Probab=99.96 E-value=4.3e-29 Score=194.41 Aligned_cols=126 Identities=21% Similarity=0.332 Sum_probs=103.6
Q ss_pred cccCCCCCccccchHHHHHHh-----------hCCCCchhHHHHhh-hhcC-C---C-------------CCCcceEEec
Q 033037 2 LKEEGLPAGVTLGSCTVLEAA-----------GDGALPTLLKTLES-SISQ-T---N-------------TNNEQVIWTS 52 (129)
Q Consensus 2 ~~k~~lP~~~~l~s~~vl~~~-----------G~a~~r~~~~t~E~-~i~~-~---~-------------~~~~~~~~T~ 52 (129)
+.++.||+.+......+.+.+ ||+++|+. +++|+ |+|. . + .+|+.+|||+
T Consensus 36 i~~~~lPv~~~~~~~~l~~~~~~~~pd~vi~vG~a~gr~~-i~iEr~A~N~~~~~~pDn~G~~p~~~~i~~~gp~~~~tt 114 (208)
T 1x10_A 36 VFGRVLPVVFGKAKEVLEKTLEEIKPDIAIHVGLAPGRSA-ISIERIAVNAIDARIPDNEGKKIEDEPIVPGAPTAYFST 114 (208)
T ss_dssp EEEEEECSSTTHHHHHHHHHHHHHCCSEEEEEEECTTCCS-EEEECEEESCBCCSSCCTTSCCCCSBCSSTTSCSEEECC
T ss_pred EEEEEEeeEHHHHHHHHHHHHHHhCCCEEEEecCCCCCce-EEeEEEEEcCCCcccCCCCCCCCCCCceeCCCCceeEcC
Confidence 356779999888666554444 99999998 99999 6774 1 1 2778899999
Q ss_pred CcHHHHHHHHHhcCCceEecCCCChhhhhHHHHHHHHHhhhc--CCceEEEEeCCCCC--------------CChHHHHH
Q 033037 53 LSTEAILKFLKKKGFDVVISDDAGRFVCNYVYYHSLRFAEQK--GHKSLFVHVPLFST--------------IDEDTQMQ 116 (129)
Q Consensus 53 lp~~~l~~~l~~~g~~~~~S~dAG~ylCN~iyY~sL~~~~~~--~~~~~FVHVP~~~~--------------~~~e~~~~ 116 (129)
+|+++|+++|+++|+|+++|+|||+|||||+||++|++.+++ +.+++|||||++++ ++.++..+
T Consensus 115 lpi~~iv~~l~~~gi~~~vS~~AG~ylCN~i~Y~sL~~~~~~~~~~~~gFIHVP~~~~~~~~~~~~~~~~p~~~~~~~~~ 194 (208)
T 1x10_A 115 LPIKKIMKKLHERGIPAYISNSAGLYLSNYVMYLSLHHSATKGYPKMSGFIHVPYIPEQIIDKIGKGQVPPSMSYEMALE 194 (208)
T ss_dssp SCHHHHHHHHHHTTCCEEEESCCCSSHHHHHHHHHHHHHHHHSCCSEEEEEEECBCGGGTHHHHTTSCCCCBCCHHHHHH
T ss_pred CCHHHHHHHHHhCCCCEEEecCCCcchhhHHHHHHHHHHHhccCCCceEEEEcCCCchhhhcccCcCCCCCCCCHHHHHH
Confidence 999999999999999999999999999999999999999753 33999999998874 34566677
Q ss_pred HHHHHHHHHHhh
Q 033037 117 FVATLFEAVAST 128 (129)
Q Consensus 117 ~v~~li~~la~~ 128 (129)
.+..+|+++.+.
T Consensus 195 ~l~~~i~~~~~~ 206 (208)
T 1x10_A 195 AVKVAIEVALEE 206 (208)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 778788877654
No 10
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=40.82 E-value=1e+02 Score=22.49 Aligned_cols=73 Identities=11% Similarity=0.114 Sum_probs=40.0
Q ss_pred cHHHHHHHHHhcCCceEecCC--CChhhhhH--------------------HHHHHHHHhhhcCCceEEEEeCCCCCCCh
Q 033037 54 STEAILKFLKKKGFDVVISDD--AGRFVCNY--------------------VYYHSLRFAEQKGHKSLFVHVPLFSTIDE 111 (129)
Q Consensus 54 p~~~l~~~l~~~g~~~~~S~d--AG~ylCN~--------------------iyY~sL~~~~~~~~~~~FVHVP~~~~~~~ 111 (129)
.++++.+.+++.|+.+..-.. .|...+|. .+=..+..+..-+.+.+-+|....+.. .
T Consensus 52 ~~~~~~~~l~~~gl~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~i~~a~~lG~~~v~~~~G~~~~~-~ 130 (290)
T 3tva_A 52 HAQAFRAKCDAAGIQVTVIFGGFDGESYADIPTTARTVGLVPLETRASRVAEMKEISDFASWVGCPAIGLHIGFVPES-S 130 (290)
T ss_dssp HHHHHHHHHHHTTCEEEEEECCCTTCCCSSHHHHHHHSSSCSTTTHHHHHHHHHHHHHHHHHHTCSEEEECCCCCCCT-T
T ss_pred HHHHHHHHHHHcCCEEEEEeeccCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCccc-c
Confidence 378899999999998654321 24434442 223344444444788888886544433 2
Q ss_pred HHHHHHHHHHHHHHHh
Q 033037 112 DTQMQFVATLFEAVAS 127 (129)
Q Consensus 112 e~~~~~v~~li~~la~ 127 (129)
+...+.+.+.++.+++
T Consensus 131 ~~~~~~~~~~l~~l~~ 146 (290)
T 3tva_A 131 SPDYSELVRVTQDLLT 146 (290)
T ss_dssp SHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHH
Confidence 2333334444444443
No 11
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=39.06 E-value=76 Score=22.83 Aligned_cols=75 Identities=13% Similarity=0.113 Sum_probs=42.4
Q ss_pred cCcHHHHHHHHHhcCCceEecCCCChhhhh----------HHHHHHHHHhhhcCCceEEEEeCCCC--CCChHHHHHHHH
Q 033037 52 SLSTEAILKFLKKKGFDVVISDDAGRFVCN----------YVYYHSLRFAEQKGHKSLFVHVPLFS--TIDEDTQMQFVA 119 (129)
Q Consensus 52 ~lp~~~l~~~l~~~g~~~~~S~dAG~ylCN----------~iyY~sL~~~~~~~~~~~FVHVP~~~--~~~~e~~~~~v~ 119 (129)
...++++.+.+++.|+.+..- .++.+++. ..+-..+..+..-+.+.+-+|.-..+ ..+.+...+.+.
T Consensus 44 ~~~~~~~~~~l~~~gl~~~~~-~~~~~~~~~d~~~r~~~~~~~~~~i~~a~~lG~~~v~~~~g~~~~~~~~~~~~~~~~~ 122 (275)
T 3qc0_A 44 AIGLGEAGRIVRANGLKLTGL-CRGGFFPAPDASGREKAIDDNRRAVDEAAELGADCLVLVAGGLPGGSKNIDAARRMVV 122 (275)
T ss_dssp HHCHHHHHHHHHHHTCEESCE-EEEECCCCSSHHHHHHHHHHHHHHHHHHHHTTCSCEEEECBCCCTTCCCHHHHHHHHH
T ss_pred ccCHHHHHHHHHHcCCceEEe-ecCCCcCCCCHHHHHHHHHHHHHHHHHHHHhCCCEEEEeeCCCCCCCcCHHHHHHHHH
Confidence 346788999999999975421 12222321 23334555555557888888853232 234455555555
Q ss_pred HHHHHHHh
Q 033037 120 TLFEAVAS 127 (129)
Q Consensus 120 ~li~~la~ 127 (129)
+.++.+++
T Consensus 123 ~~l~~l~~ 130 (275)
T 3qc0_A 123 EGIAAVLP 130 (275)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 66666554
No 12
>2eo1_A OBSCN protein, cDNA FLJ14124 FIS, clone mamma1002498; beta-sandwich, IG-fold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=38.91 E-value=11 Score=23.23 Aligned_cols=27 Identities=26% Similarity=0.302 Sum_probs=18.2
Q ss_pred cCCCChhhhhHHHHHHHHHhhhcCCceEEEEeCCC
Q 033037 72 SDDAGRFVCNYVYYHSLRFAEQKGHKSLFVHVPLF 106 (129)
Q Consensus 72 S~dAG~ylCN~iyY~sL~~~~~~~~~~~FVHVP~~ 106 (129)
..|+|.|.|..- .....-.+.|..|++
T Consensus 75 ~~D~G~Y~C~a~--------~~~~~~~l~V~~p~~ 101 (102)
T 2eo1_A 75 QAEAGEYSCEAG--------GQQLSFRLQVAGQCF 101 (102)
T ss_dssp TTTCSCEEEEET--------TEECCEEEEEESCCC
T ss_pred cccCEEEEEEcC--------CCcEEEEEEEeCCCC
Confidence 479999999551 112345678888876
No 13
>4a4j_A Pacszia, cation-transporting ATPase PACS; hydrolase, copper homeostasis, zinc homeostasis, ATX1, metal-transporting atpases; 1.25A {Synechocystis} PDB: 4a48_A 2gcf_A 2xmw_A
Probab=37.75 E-value=45 Score=18.80 Aligned_cols=21 Identities=5% Similarity=0.297 Sum_probs=18.1
Q ss_pred ecCcHHHHHHHHHhcCCceEe
Q 033037 51 TSLSTEAILKFLKKKGFDVVI 71 (129)
Q Consensus 51 T~lp~~~l~~~l~~~g~~~~~ 71 (129)
+.++.+++.+.+++.|+++.+
T Consensus 48 ~~~~~~~i~~~i~~~Gy~~~~ 68 (69)
T 4a4j_A 48 GETTPQILTDAVERAGYHARV 68 (69)
T ss_dssp TTCCHHHHHHHHHHTTCEEEE
T ss_pred CCCCHHHHHHHHHHcCCceEe
Confidence 678899999999999998754
No 14
>2fi0_A Conserved domain protein; structural genomics,streptococcus pneumoniae, PSI, protein S initiative; 2.10A {Streptococcus pneumoniae} SCOP: a.248.1.1
Probab=34.70 E-value=33 Score=21.73 Aligned_cols=30 Identities=17% Similarity=0.398 Sum_probs=23.6
Q ss_pred HHHHhhhhcCCCCCCcceEEecCcHHHHHHHHHhcCCceE
Q 033037 31 LKTLESSISQTNTNNEQVIWTSLSTEAILKFLKKKGFDVV 70 (129)
Q Consensus 31 ~~t~E~~i~~~~~~~~~~~~T~lp~~~l~~~l~~~g~~~~ 70 (129)
..|||.++. .-.+|++++++.|++.|+.+.
T Consensus 49 ~~TL~~aa~----------~~gid~d~l~~~L~~~g~~~~ 78 (81)
T 2fi0_A 49 KVSLKQGSK----------LAGTPMDKIVRTLEANGYEVI 78 (81)
T ss_dssp HCBHHHHHH----------HHTCCHHHHHHHHHHTTCEEE
T ss_pred cCcHHHHHH----------HcCCCHHHHHHHHHHcCCEee
Confidence 377777533 156999999999999999875
No 15
>2e7b_A Obscurin; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yz8_A
Probab=34.34 E-value=13 Score=22.78 Aligned_cols=27 Identities=30% Similarity=0.560 Sum_probs=17.4
Q ss_pred CCCChhhhhHHHHHHHHHhhhcCCceEEEEeCCCC
Q 033037 73 DDAGRFVCNYVYYHSLRFAEQKGHKSLFVHVPLFS 107 (129)
Q Consensus 73 ~dAG~ylCN~iyY~sL~~~~~~~~~~~FVHVP~~~ 107 (129)
.|+|.|.|. .-.....-.+.|+.|+..
T Consensus 73 ~D~G~Y~C~--------~g~~~~~~~l~V~~~p~~ 99 (103)
T 2e7b_A 73 QDSGRYSCS--------FGDQTTSATLTVTALPSG 99 (103)
T ss_dssp TTCCCEEEE--------CSSCBCCBCEEEECCCCC
T ss_pred ccCEEEEEE--------ECCcEEEEEEEEEecccc
Confidence 699999996 111123445778877753
No 16
>2y9j_Y Lipoprotein PRGK, protein PRGK; protein transport, type III secretion, IR1, inner membrane R C24-fold; 6.40A {Salmonella enterica subsp}
Probab=29.62 E-value=1.3e+02 Score=21.72 Aligned_cols=80 Identities=8% Similarity=0.158 Sum_probs=52.5
Q ss_pred EEecCcH---HHHHHHHHhcCCceEecCCC--C--hhhhhHHHHHHHHHhhhcCC----ceEE-EEeCC--CCCCChHHH
Q 033037 49 IWTSLST---EAILKFLKKKGFDVVISDDA--G--RFVCNYVYYHSLRFAEQKGH----KSLF-VHVPL--FSTIDEDTQ 114 (129)
Q Consensus 49 ~~T~lp~---~~l~~~l~~~g~~~~~S~dA--G--~ylCN~iyY~sL~~~~~~~~----~~~F-VHVP~--~~~~~~e~~ 114 (129)
++++++- .+++..|.++||+.+++.+- | -+|-.--+|.+.-.+...+. ..+| --.+. +..-+.+.+
T Consensus 3 Ly~~L~~~da~~i~~~L~~~~I~y~~~~~~~~g~~I~Vp~~~~~~ar~~La~~GLP~~~~~g~~elf~~~~~g~T~~~e~ 82 (170)
T 2y9j_Y 3 LLKGLDQEQANEVIAVLQMHNIEANKIDSGKLGYSITVAEPDFTAAVYWIKTYQLPPRPRVEIAQMFPADSLVSSPRAEK 82 (170)
T ss_dssp EEEEECHHHHHHHHHHHHHTTCCEEEEECTTSCEEEEECGGGHHHHHHHHHHTTCSCCCCCCTTCCTTTCSCCCSHHHHH
T ss_pred cccCCCHHHHHHHHHHHHHcCCCEEEecCCCCCeEEEECHHHHHHHHHHHHHcCCCCCCCCCHHHHhCCCCCCCCHHHHH
Confidence 4455554 46999999999999999773 4 37777778888777665542 3455 44442 222234556
Q ss_pred HHHHHHHHHHHHhh
Q 033037 115 MQFVATLFEAVAST 128 (129)
Q Consensus 115 ~~~v~~li~~la~~ 128 (129)
.+....+-.+|+.+
T Consensus 83 ~~~~rale~ELart 96 (170)
T 2y9j_Y 83 ARLYSAIEQRLEQS 96 (170)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 67777777777753
No 17
>1dd5_A Ribosome recycling factor; three-helix bundle, beta-alpha-beta sandwich; 2.55A {Thermotoga maritima} SCOP: d.67.3.1 PDB: 1t1m_C
Probab=28.89 E-value=1.7e+02 Score=21.68 Aligned_cols=50 Identities=12% Similarity=0.205 Sum_probs=35.3
Q ss_pred cceEEecCc---HHHHHHHHHhcCCceEecCCCChhhhhHHHHHHHHHhhhcCCceEEEEeCCCCCCChHHHHHHHH
Q 033037 46 EQVIWTSLS---TEAILKFLKKKGFDVVISDDAGRFVCNYVYYHSLRFAEQKGHKSLFVHVPLFSTIDEDTQMQFVA 119 (129)
Q Consensus 46 ~~~~~T~lp---~~~l~~~l~~~g~~~~~S~dAG~ylCN~iyY~sL~~~~~~~~~~~FVHVP~~~~~~~e~~~~~v~ 119 (129)
....-+.++ +..+.++++..++-..+++| | .++.|.+|+++ +|...+++.
T Consensus 63 r~l~I~p~D~~~i~~IekAI~~SdLglnP~~d-G--------------------~~Iri~iP~lT---eErRkelvK 115 (185)
T 1dd5_A 63 RTLVIKPWDKSVLSLIEKAINASDLGLNPIND-G--------------------NVIRLVFPSPT---TEQREKWVK 115 (185)
T ss_dssp TEEEEEESSTTHHHHHHHHHHHSSSCCCCEEC-S--------------------SCEEEECCCCC---HHHHHHHHH
T ss_pred CEEEEEecCHhHHHHHHHHHHHcCCCCCcccC-C--------------------CEEEEeCCCCC---HHHHHHHHH
Confidence 333456666 77888888887776666654 4 68999999999 666555543
No 18
>1wqg_A Ribosome recycling factor; translation factor, triple-helix bundle, protein synthesis, translation; 2.15A {Mycobacterium tuberculosis} SCOP: d.67.3.1 PDB: 1wqf_A 1wqh_A
Probab=27.60 E-value=1.1e+02 Score=22.65 Aligned_cols=48 Identities=23% Similarity=0.371 Sum_probs=34.3
Q ss_pred eEEecCc---HHHHHHHHHhcCCceEecCCCChhhhhHHHHHHHHHhhhcCCceEEEEeCCCCCCChHHHHHHHH
Q 033037 48 VIWTSLS---TEAILKFLKKKGFDVVISDDAGRFVCNYVYYHSLRFAEQKGHKSLFVHVPLFSTIDEDTQMQFVA 119 (129)
Q Consensus 48 ~~~T~lp---~~~l~~~l~~~g~~~~~S~dAG~ylCN~iyY~sL~~~~~~~~~~~FVHVP~~~~~~~e~~~~~v~ 119 (129)
..-+.++ +..+.++++..++-..+++| | ..+.|.+|+++ +|...+++.
T Consensus 65 l~I~p~D~~~i~~IekAI~~SdLglnP~~d-G--------------------~~Iri~iP~lT---eErRkelvK 115 (185)
T 1wqg_A 65 VVIKPYEANQLRAIETAIRNSDLGVNPTND-G--------------------ALIRVAVPQLT---EERRRELVK 115 (185)
T ss_dssp EEEEESSGGGHHHHHHHHHHSTTCCCCEEC-S--------------------SCEEEECCCCC---HHHHHHHHH
T ss_pred EEEEeCCHhHHHHHHHHHHHcCCCCCcccC-C--------------------CEEEEeCCCCC---HHHHHHHHH
Confidence 3346665 77888888887776666654 4 68999999999 666555543
No 19
>3abf_A 4-oxalocrotonate tautomerase; isomerase; 1.94A {Thermus thermophilus}
Probab=27.49 E-value=61 Score=18.46 Aligned_cols=29 Identities=17% Similarity=0.241 Sum_probs=19.0
Q ss_pred EEEeCCCCCCChHHHHHHHHHHHHHHHhh
Q 033037 100 FVHVPLFSTIDEDTQMQFVATLFEAVAST 128 (129)
Q Consensus 100 FVHVP~~~~~~~e~~~~~v~~li~~la~~ 128 (129)
||||=.....+.++..+++.++-+.+++.
T Consensus 3 ~i~i~~~~g~s~eqk~~l~~~lt~~l~~~ 31 (64)
T 3abf_A 3 VLKVTLLEGRPPEKKRELVRRLTEMASRL 31 (64)
T ss_dssp EEEEEEETTCCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEECCCCCHHHHHHHHHHHHHHHHHH
Confidence 34443333456777778888888888764
No 20
>3kgk_A Arsenical resistance operon trans-acting represso; alpha+beta, chaperone, DNA-binding, RE transcription, transcription regulation; 1.40A {Escherichia coli} PDB: 3mwh_A
Probab=27.42 E-value=1.2e+02 Score=20.73 Aligned_cols=49 Identities=16% Similarity=0.250 Sum_probs=37.5
Q ss_pred CcHHHHHHHHHhcCCceE---ecCCCChhhhhHHHHHHHHHhhhcCCceEEE
Q 033037 53 LSTEAILKFLKKKGFDVV---ISDDAGRFVCNYVYYHSLRFAEQKGHKSLFV 101 (129)
Q Consensus 53 lp~~~l~~~l~~~g~~~~---~S~dAG~ylCN~iyY~sL~~~~~~~~~~~FV 101 (129)
+.+...++.|+++|+.+. ++.+|..|+=|-.=-.-|...-....|.++|
T Consensus 27 ~~~~~~~~~lk~~Gi~V~RyNL~~~P~aF~~N~~V~~~L~~~G~~~LP~~~V 78 (110)
T 3kgk_A 27 VDFSTDVQWLKQSGVQIERFNLAQQPMSFVQNEKVKAFIEASGAEGLPLLLL 78 (110)
T ss_dssp HHHHHHHHHHHHHTCCEEEEETTTCTTHHHHSHHHHHHHHHHCGGGCCEEEE
T ss_pred HHHHHHHHHHHHCCCeEEEEccccChHHHhcCHHHHHHHHHcCcccCCEEEE
Confidence 455678999999999864 8899999999998888877653233566665
No 21
>1ise_A Ribosome recycling factor; translation; 2.20A {Escherichia coli} SCOP: d.67.3.1 PDB: 1ek8_A* 1zn0_A 1zn1_A 2rdo_8
Probab=27.21 E-value=1.2e+02 Score=22.46 Aligned_cols=48 Identities=13% Similarity=0.240 Sum_probs=34.2
Q ss_pred eEEecCc---HHHHHHHHHhcCCceEecCCCChhhhhHHHHHHHHHhhhcCCceEEEEeCCCCCCChHHHHHHHH
Q 033037 48 VIWTSLS---TEAILKFLKKKGFDVVISDDAGRFVCNYVYYHSLRFAEQKGHKSLFVHVPLFSTIDEDTQMQFVA 119 (129)
Q Consensus 48 ~~~T~lp---~~~l~~~l~~~g~~~~~S~dAG~ylCN~iyY~sL~~~~~~~~~~~FVHVP~~~~~~~e~~~~~v~ 119 (129)
..-+.++ +..+.++++..++-..+++| | .++.|.+|+++ +|...+++.
T Consensus 65 l~I~p~D~~~i~~IekAI~~SdLglnP~~d-G--------------------~~Iri~iP~lT---eErRkelvK 115 (185)
T 1ise_A 65 LKINVFDRSMSPAVEKAIMASDLGLNPNSA-G--------------------SDIRVPLPPLT---EERRKDLTK 115 (185)
T ss_dssp EEEEESSGGGHHHHHHHHHTTCTTCCCEES-S--------------------SEEEEECCCCC---HHHHHHHHH
T ss_pred EEEeccCHhHHHHHHHHHHHcCCCCCcccC-C--------------------CEEEEeCCCCC---HHHHHHHHH
Confidence 3446665 77888888887776666654 3 68999999999 666555543
No 22
>3iwl_A Copper transport protein ATOX1; beta-alpha-beta-BETA-alpha-beta, cisplatin, platinum, chaperone, ION transport, metal-binding, metal transport; HET: TCE; 1.60A {Homo sapiens} SCOP: d.58.17.1 PDB: 1fe4_A* 1fee_A* 1tl4_A 1tl5_A 2k1r_B 1fe0_A* 3iwx_A 3cjk_A
Probab=27.03 E-value=82 Score=17.93 Aligned_cols=28 Identities=32% Similarity=0.340 Sum_probs=21.9
Q ss_pred CCcceEEecCcHHHHHHHHHhcCCceEe
Q 033037 44 NNEQVIWTSLSTEAILKFLKKKGFDVVI 71 (129)
Q Consensus 44 ~~~~~~~T~lp~~~l~~~l~~~g~~~~~ 71 (129)
.+...+...++.+++.+.+++.|+++.+
T Consensus 37 ~~~~~v~~~~~~~~i~~~i~~~Gy~~~~ 64 (68)
T 3iwl_A 37 NKKVCIESEHSMDTLLATLKKTGKTVSY 64 (68)
T ss_dssp TTEEEEEESSCHHHHHHHHHTTCSCEEE
T ss_pred CCEEEEEecCCHHHHHHHHHHcCCceEe
Confidence 3444455678999999999999998764
No 23
>3ktb_A Arsenical resistance operon trans-acting represso; alpha-beta-alpha sandwich, helix-turn-helix, structural GENO PSI-2; 2.10A {Bacteroides vulgatus}
Probab=26.71 E-value=1.1e+02 Score=20.76 Aligned_cols=50 Identities=20% Similarity=0.267 Sum_probs=37.5
Q ss_pred CcHHHHHHHHHhcCCceE---ecCCCChhhhhHHHHHHHHHhhhcCCceEEEE
Q 033037 53 LSTEAILKFLKKKGFDVV---ISDDAGRFVCNYVYYHSLRFAEQKGHKSLFVH 102 (129)
Q Consensus 53 lp~~~l~~~l~~~g~~~~---~S~dAG~ylCN~iyY~sL~~~~~~~~~~~FVH 102 (129)
+-+...+..|+++|+.+. ++.+|..|+=|-.=-.-|...-....|.++|.
T Consensus 30 ~~~~~~~~~lk~~Gi~V~RyNL~~~P~~F~~N~~V~~~L~~~G~~~LP~~~VD 82 (106)
T 3ktb_A 30 MRIAVVIESLKKQGIIVTRHNLRDEPQVYVSNKTVNDFLQKHGADALPITLVD 82 (106)
T ss_dssp HHHHHHHHHHHHTTCCCEEEETTTCTTHHHHSHHHHHHHHTTCGGGCSEEEET
T ss_pred HHHHHHHHHHHHCCCEEEEEccccChHHHhcCHHHHHHHHHcCcccCCEEEEC
Confidence 445678999999999854 89999999999987777765422235666663
No 24
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=26.49 E-value=1.8e+02 Score=20.98 Aligned_cols=74 Identities=15% Similarity=0.192 Sum_probs=41.3
Q ss_pred CcHHHHHHHHHhcCCceEe-cCCCChhhh---------------hHHHHHHHHHhhhcCCceEEEEeCCCC-CCChHHHH
Q 033037 53 LSTEAILKFLKKKGFDVVI-SDDAGRFVC---------------NYVYYHSLRFAEQKGHKSLFVHVPLFS-TIDEDTQM 115 (129)
Q Consensus 53 lp~~~l~~~l~~~g~~~~~-S~dAG~ylC---------------N~iyY~sL~~~~~~~~~~~FVHVP~~~-~~~~e~~~ 115 (129)
.+.+++.+.+++.|+.+.. ....+.+.. --.+-..+..+..-+.+.+-+|.. .+ ..+.+...
T Consensus 48 ~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~i~~A~~lGa~~v~~~~g-~~~~~~~~~~~ 126 (269)
T 3ngf_A 48 FDADVIARELKQHNLTQVLFNMPPGDWAAGERGMAAISGREQEFRDNVDIALHYALALDCRTLHAMSG-ITEGLDRKACE 126 (269)
T ss_dssp SCHHHHHHHHHHTTCEEEEEECCCSCTTTTCCBCTTCTTCHHHHHHHHHHHHHHHHHTTCCEEECCBC-BCTTSCHHHHH
T ss_pred CCHHHHHHHHHHcCCcEEEEecCCCccccCCCCcCCCccHHHHHHHHHHHHHHHHHHcCCCEEEEccC-CCCCCCHHHHH
Confidence 4688999999999998653 222221111 012334555555557777777755 32 23444455
Q ss_pred HHHHHHHHHHHh
Q 033037 116 QFVATLFEAVAS 127 (129)
Q Consensus 116 ~~v~~li~~la~ 127 (129)
+.+.+.++.|++
T Consensus 127 ~~~~~~l~~l~~ 138 (269)
T 3ngf_A 127 ETFIENFRYAAD 138 (269)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 555555555554
No 25
>1eh1_A Ribosome recycling factor; translation, hinge variability; 2.60A {Thermus thermophilus} SCOP: d.67.3.1 PDB: 2qbe_6 2qbg_6 2qbi_6* 2qbk_6* 2v46_Y* 2v48_Y* 2z4l_6* 2z4n_6* 3j0d_J 3j0e_G
Probab=24.95 E-value=1.6e+02 Score=21.80 Aligned_cols=50 Identities=18% Similarity=0.422 Sum_probs=34.1
Q ss_pred CCcceEEecCc---HHHHHHHHHhcCCceEecCCCChhhhhHHHHHHHHHhhhcCCceEEEEeCCCCCCChHHHHHH
Q 033037 44 NNEQVIWTSLS---TEAILKFLKKKGFDVVISDDAGRFVCNYVYYHSLRFAEQKGHKSLFVHVPLFSTIDEDTQMQF 117 (129)
Q Consensus 44 ~~~~~~~T~lp---~~~l~~~l~~~g~~~~~S~dAG~ylCN~iyY~sL~~~~~~~~~~~FVHVP~~~~~~~e~~~~~ 117 (129)
++....-+.++ +..+.++++..++-..+++| | .++.|.+|+++ +|...++
T Consensus 62 ~~r~l~I~p~D~~~i~~IekAI~~SdLglnP~~d-G--------------------~~Iri~iP~lT---eErRkel 114 (185)
T 1eh1_A 62 DPRTLVVQSWDQNALKAIEKAIRDSDLGLNPSNK-G--------------------DALYINIPPLT---EERRKDL 114 (185)
T ss_dssp STTEEEEECSSHHHHHHHHHHHSSSTTCCCEEEE-T--------------------TEEEEECCCCC---TTHHHHH
T ss_pred CCCEEEEecCCHhHHHHHHHHHHHcCCCCCcccC-C--------------------CEEEEeCCCCC---HHHHHHH
Confidence 33344457777 66778888877776666654 4 68999999999 5544443
No 26
>3m20_A 4-oxalocrotonate tautomerase, putative; DMPI, thermophIle, beta-alpha-beta, catalytic proline, isomerase; 2.37A {Archaeoglobus fulgidus}
Probab=24.88 E-value=78 Score=18.35 Aligned_cols=27 Identities=22% Similarity=0.220 Sum_probs=18.3
Q ss_pred EEeCCCCCCChHHHHHHHHHHHHHHHhh
Q 033037 101 VHVPLFSTIDEDTQMQFVATLFEAVAST 128 (129)
Q Consensus 101 VHVP~~~~~~~e~~~~~v~~li~~la~~ 128 (129)
|||=. ...+.|+..+++..+-+.+++.
T Consensus 3 I~I~~-~grt~eqK~~L~~~it~~~~~~ 29 (62)
T 3m20_A 3 LIVYG-PKLDVGKKREFVERLTSVAAEI 29 (62)
T ss_dssp EEEEC-SCCCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEE-CCCCHHHHHHHHHHHHHHHHHH
Confidence 34433 4456888888888888887763
No 27
>1is1_A Ribosome recycling factor; translation; 2.20A {Vibrio parahaemolyticus} SCOP: d.67.3.1 PDB: 3r8n_Y
Probab=24.87 E-value=1.2e+02 Score=22.46 Aligned_cols=47 Identities=17% Similarity=0.243 Sum_probs=33.4
Q ss_pred EEecCc---HHHHHHHHHhcCCceEecCCCChhhhhHHHHHHHHHhhhcCCceEEEEeCCCCCCChHHHHHHHH
Q 033037 49 IWTSLS---TEAILKFLKKKGFDVVISDDAGRFVCNYVYYHSLRFAEQKGHKSLFVHVPLFSTIDEDTQMQFVA 119 (129)
Q Consensus 49 ~~T~lp---~~~l~~~l~~~g~~~~~S~dAG~ylCN~iyY~sL~~~~~~~~~~~FVHVP~~~~~~~e~~~~~v~ 119 (129)
.-+.++ +..+.++++..++-..+++| | .++.|.+|+++ +|...+++.
T Consensus 66 ~I~p~D~~~i~~IekAI~~SdLglnP~~d-G--------------------~~Iri~iP~lT---eErRkelvK 115 (185)
T 1is1_A 66 AITVFDKELTQKVEKAIMMSDLGLNPMSA-G--------------------TIIRVPLPPLT---EERRKDLVK 115 (185)
T ss_dssp EEEESSTTTHHHHHHHHHHTTSSCCCEEE-T--------------------TEEEEECCCCC---HHHHHHHHH
T ss_pred EEEecCHhHHHHHHHHHHHcCCCCCcccC-C--------------------CEEEEeCCCCC---HHHHHHHHH
Confidence 345555 77888888887776666644 3 68999999999 666555543
No 28
>3cjk_B Copper-transporting ATPase 1; HAH1, ATP7B, menkes disease, metal homeostasis, chaperone, ION transport, metal- binding, alternative splicing; 1.80A {Homo sapiens} PDB: 2k1r_A
Probab=24.58 E-value=45 Score=18.83 Aligned_cols=26 Identities=27% Similarity=0.482 Sum_probs=21.0
Q ss_pred cCcHHHHHHHHHhcCCceEecCCCCh
Q 033037 52 SLSTEAILKFLKKKGFDVVISDDAGR 77 (129)
Q Consensus 52 ~lp~~~l~~~l~~~g~~~~~S~dAG~ 77 (129)
.++.+++.+.+...|+++.+....|+
T Consensus 50 ~~~~~~i~~~i~~~Gy~~~~~~~~~~ 75 (75)
T 3cjk_B 50 LQTPKTLQEAIDDMGFDAVIHNIEGR 75 (75)
T ss_dssp TCCHHHHHHHHHHTTCCEEEEEEECC
T ss_pred CCCHHHHHHHHHHcCCceEeecCcCC
Confidence 35778899999999999887776664
No 29
>1otf_A 4-oxalocrotonate tautomerase; isomerase; 1.90A {Pseudomonas SP} SCOP: d.80.1.1 PDB: 4otc_A 4ota_A 4otb_A 1bjp_A 2fm7_A
Probab=24.40 E-value=53 Score=18.54 Aligned_cols=29 Identities=10% Similarity=0.258 Sum_probs=18.5
Q ss_pred EEEeCCCCCCChHHHHHHHHHHHHHHHhh
Q 033037 100 FVHVPLFSTIDEDTQMQFVATLFEAVAST 128 (129)
Q Consensus 100 FVHVP~~~~~~~e~~~~~v~~li~~la~~ 128 (129)
||||=.....+.|...++...+-+.+++.
T Consensus 2 ~i~I~~~~grs~e~k~~l~~~i~~~l~~~ 30 (62)
T 1otf_A 2 IAQLYIIEGRTDEQKETLIRQVSEAMANS 30 (62)
T ss_dssp EEEEEEESCCCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEcCCCCHHHHHHHHHHHHHHHHHH
Confidence 45553334456777778888887777653
No 30
>3m21_A Probable tautomerase HP_0924; 4-oxalocrotonate tautomerase, catalytic proline, hexamer, BE beta, isomerase; 1.90A {Helicobacter pylori} PDB: 2orm_A
Probab=24.34 E-value=59 Score=19.14 Aligned_cols=29 Identities=10% Similarity=0.320 Sum_probs=19.8
Q ss_pred EEEeCCCC---CCChHHHHHHHHHHHHHHHhh
Q 033037 100 FVHVPLFS---TIDEDTQMQFVATLFEAVAST 128 (129)
Q Consensus 100 FVHVP~~~---~~~~e~~~~~v~~li~~la~~ 128 (129)
||||=.+. ..+.|+..+++..+-+.+++.
T Consensus 2 ~i~I~~~~~~~grs~eqK~~l~~~lt~~l~~~ 33 (67)
T 3m21_A 2 FINIKLVPENGGPTNEQKQQLIEGVSDLMVKV 33 (67)
T ss_dssp EEEEEECCBTTBSCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEecCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 45554454 466788888888888887753
No 31
>1jhl_L IGG1-kappa D11.15 FV (light chain); complex(antibody-antigen); 2.40A {Mus musculus} SCOP: b.1.1.1
Probab=24.20 E-value=16 Score=22.93 Aligned_cols=11 Identities=18% Similarity=0.625 Sum_probs=9.3
Q ss_pred CCCChhhhhHH
Q 033037 73 DDAGRFVCNYV 83 (129)
Q Consensus 73 ~dAG~ylCN~i 83 (129)
.|+|.|.|...
T Consensus 81 ~DsG~Y~C~~~ 91 (108)
T 1jhl_L 81 EDFAMYICQQH 91 (108)
T ss_dssp TCCSEEEEEEC
T ss_pred HHCEEEEEEEc
Confidence 79999999753
No 32
>1taf_B TFIID TBP associated factor 62; transcription initiation, histone fold, complex (TWO transcr factors); 2.00A {Drosophila melanogaster} SCOP: a.22.1.3
Probab=23.34 E-value=54 Score=20.67 Aligned_cols=43 Identities=23% Similarity=0.239 Sum_probs=37.4
Q ss_pred EEecCcHHHHHHHHHhcCCceEecCCCChhhhhHHHHHHHHHhh
Q 033037 49 IWTSLSTEAILKFLKKKGFDVVISDDAGRFVCNYVYYHSLRFAE 92 (129)
Q Consensus 49 ~~T~lp~~~l~~~l~~~g~~~~~S~dAG~ylCN~iyY~sL~~~~ 92 (129)
+-+.+|.+.+-.-.+..|+ -.+|+||-.-+.+.+=|+....++
T Consensus 3 ~~s~lp~~~v~~iaes~Gi-~~lsddaa~~LA~dvEyr~~eI~q 45 (70)
T 1taf_B 3 YGSSISAESMKVIAESIGV-GSLSDDAAKELAEDVSIKLKRIVQ 45 (70)
T ss_dssp CSCCCCHHHHHHHHHHTTC-CCBCHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCHHHHHHHHHHCCC-CCCCHHHHHHHHHHHHHHHHHHHH
Confidence 3477999999999999999 489999999999999999887664
No 33
>2k1m_A Myosin-binding protein C, cardiac-type; IG-I domain, cardiac muscle, hypertrophic cardiomyopathy, actin-binding, cell adhesion, disease mutation; NMR {Homo sapiens}
Probab=23.28 E-value=17 Score=22.15 Aligned_cols=10 Identities=20% Similarity=0.361 Sum_probs=9.0
Q ss_pred CCCChhhhhH
Q 033037 73 DDAGRFVCNY 82 (129)
Q Consensus 73 ~dAG~ylCN~ 82 (129)
.|+|.|.|..
T Consensus 73 ~D~G~Y~C~a 82 (95)
T 2k1m_A 73 ADQGSYAVIA 82 (95)
T ss_dssp TCCSEEEEEE
T ss_pred ccCEEEEEEE
Confidence 7999999976
No 34
>1qfw_M FV, antibody (anti beta subunit) (light chain); glycoprotein hormone; HET: NAG; 3.50A {Mus musculus} SCOP: b.1.1.1
Probab=23.23 E-value=17 Score=22.91 Aligned_cols=11 Identities=18% Similarity=0.564 Sum_probs=9.3
Q ss_pred CCCChhhhhHH
Q 033037 73 DDAGRFVCNYV 83 (129)
Q Consensus 73 ~dAG~ylCN~i 83 (129)
.|+|.|.|...
T Consensus 81 ~DsG~Y~C~~~ 91 (108)
T 1qfw_M 81 EDFADYHCGQT 91 (108)
T ss_dssp TCCSEEEEEEC
T ss_pred hhCEEEEEEEc
Confidence 69999999764
No 35
>4gjt_B Poliovirus receptor-related protein 4; six-bladed -propeller, IGV-like fold, viral entry, MV-H, NEC BETA4/BETA5 groove; HET: NAG; 3.10A {Homo sapiens}
Probab=22.85 E-value=17 Score=23.59 Aligned_cols=10 Identities=30% Similarity=0.843 Sum_probs=8.6
Q ss_pred CCCChhhhhH
Q 033037 73 DDAGRFVCNY 82 (129)
Q Consensus 73 ~dAG~ylCN~ 82 (129)
.|+|.|.|..
T Consensus 90 ~DsG~Y~C~v 99 (123)
T 4gjt_B 90 ADEGEYECRV 99 (123)
T ss_dssp SSCSEEEEEE
T ss_pred HHCEEEEEEE
Confidence 6999999964
No 36
>2or8_A Hepatitis A virus cellular receptor 1 homolog; beta barrel, immunoglobulin fold, IGV domain, TIM, immune system; 2.50A {Mus musculus}
Probab=22.57 E-value=12 Score=23.57 Aligned_cols=10 Identities=30% Similarity=0.883 Sum_probs=8.9
Q ss_pred CCCChhhhhH
Q 033037 73 DDAGRFVCNY 82 (129)
Q Consensus 73 ~dAG~ylCN~ 82 (129)
.|+|.|.|..
T Consensus 83 ~DsG~Y~C~v 92 (116)
T 2or8_A 83 SDSGLYCCRV 92 (116)
T ss_dssp GGCEEEEEEE
T ss_pred ccCEEEEEEE
Confidence 6999999976
No 37
>2opa_A Probable tautomerase YWHB; homohexamer, 4-oxalocrotonate tautomerase, inhibitor, 2-FLUO hydroxycinnamate, isomerase; HET: FHC; 2.40A {Bacillus subtilis} PDB: 2op8_A*
Probab=22.53 E-value=61 Score=18.26 Aligned_cols=29 Identities=24% Similarity=0.406 Sum_probs=18.3
Q ss_pred EEEeCCCCCCChHHHHHHHHHHHHHHHhh
Q 033037 100 FVHVPLFSTIDEDTQMQFVATLFEAVAST 128 (129)
Q Consensus 100 FVHVP~~~~~~~e~~~~~v~~li~~la~~ 128 (129)
||||=.+...+.|..+++...+-+.+++.
T Consensus 2 ~i~i~~~~grs~eqk~~l~~~i~~~l~~~ 30 (61)
T 2opa_A 2 YVTVKMLEGRTDEQKRNLVEKVTEAVKET 30 (61)
T ss_dssp EEEEEEESCCCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEcCCCCHHHHHHHHHHHHHHHHHH
Confidence 44443333446777778888887777653
No 38
>2dku_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.97 E-value=18 Score=22.13 Aligned_cols=10 Identities=20% Similarity=0.810 Sum_probs=8.8
Q ss_pred cCCCChhhhh
Q 033037 72 SDDAGRFVCN 81 (129)
Q Consensus 72 S~dAG~ylCN 81 (129)
..|+|.|.|.
T Consensus 72 ~~D~G~Y~C~ 81 (103)
T 2dku_A 72 KADSDTYTCD 81 (103)
T ss_dssp TTTCSEEEEE
T ss_pred cccCEEEEEE
Confidence 4799999996
No 39
>1tzy_D Histone H4-VI; histone-fold, tetramer-dimer-dimer, DNA binding protein; 1.90A {Gallus gallus} SCOP: a.22.1.1 PDB: 1f66_B 1eqz_D 1hq3_D 1u35_B 2aro_D 2cv5_B* 2f8n_B 3nqu_B 3r45_B 3azg_B 3a6n_B 3an2_B 3av1_B 3av2_B 3ayw_B 3aze_B 3azf_B 3afa_B 3azh_B 3azk_B ...
Probab=21.95 E-value=1.2e+02 Score=19.97 Aligned_cols=39 Identities=13% Similarity=0.033 Sum_probs=33.5
Q ss_pred CcHHHHHHHHHhcCCceEecCCCChhhhhHHHHHHHHHhh
Q 033037 53 LSTEAILKFLKKKGFDVVISDDAGRFVCNYVYYHSLRFAE 92 (129)
Q Consensus 53 lp~~~l~~~l~~~g~~~~~S~dAG~ylCN~iyY~sL~~~~ 92 (129)
+|...+-+-++..|+ ..+|.+|=.++.+.+-|..-..++
T Consensus 30 ip~~~I~Rlar~~G~-~rIs~~a~~~l~~vle~~~~~V~~ 68 (103)
T 1tzy_D 30 ITKPAIRRLARRGGV-KRISGLIYEETRGVLKVFLENVIR 68 (103)
T ss_dssp SCHHHHHHHHHHTTC-CEECTTHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHcCc-cccCHHHHHHHHHHHHHHHHHHHH
Confidence 899998888888898 699999999999998887766553
No 40
>2dm7_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2edl_A 2edw_A 2gqh_A 2edt_A 2edq_A 2edr_A
Probab=21.85 E-value=18 Score=22.32 Aligned_cols=26 Identities=23% Similarity=0.413 Sum_probs=16.2
Q ss_pred CCCChhhhhHHHHHHHHHhhhcCCceEEEEeCCC
Q 033037 73 DDAGRFVCNYVYYHSLRFAEQKGHKSLFVHVPLF 106 (129)
Q Consensus 73 ~dAG~ylCN~iyY~sL~~~~~~~~~~~FVHVP~~ 106 (129)
.|+|.|.|.. ......-.+.|..|+.
T Consensus 72 ~D~G~Y~C~a--------~n~~~~~~l~V~~~p~ 97 (108)
T 2dm7_A 72 ADAGEYSCMC--------GQERTSATLTVRALPA 97 (108)
T ss_dssp TTCSEEEEEE--------TTEEEEEECEEECCCS
T ss_pred ccCEEEEEEE--------cCCEEEEEEEEecCCH
Confidence 6999999986 1111233466777554
No 41
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.74 E-value=18 Score=21.91 Aligned_cols=11 Identities=27% Similarity=0.685 Sum_probs=9.1
Q ss_pred cCCCChhhhhH
Q 033037 72 SDDAGRFVCNY 82 (129)
Q Consensus 72 S~dAG~ylCN~ 82 (129)
..|+|.|.|..
T Consensus 71 ~~d~G~Y~C~a 81 (100)
T 2edj_A 71 ISDTGTYTCVA 81 (100)
T ss_dssp TTTCCEEEEEE
T ss_pred cccCEEEEEEE
Confidence 37999999964
No 42
>2yfw_B Histone H4, H4; cell cycle, kinetochore, centromere, histone chaperone, BUDD; 2.60A {Kluyveromyces lactis nrrl y-1140}
Probab=21.64 E-value=1.2e+02 Score=19.98 Aligned_cols=39 Identities=18% Similarity=0.080 Sum_probs=33.2
Q ss_pred CcHHHHHHHHHhcCCceEecCCCChhhhhHHHHHHHHHhh
Q 033037 53 LSTEAILKFLKKKGFDVVISDDAGRFVCNYVYYHSLRFAE 92 (129)
Q Consensus 53 lp~~~l~~~l~~~g~~~~~S~dAG~ylCN~iyY~sL~~~~ 92 (129)
+|...+-+-++..|+ ..+|.+|=.++.+.+-|..-..++
T Consensus 30 ip~~~I~Rlar~~G~-~rIs~~a~~~l~~vle~~~~~V~~ 68 (103)
T 2yfw_B 30 ITKPAIRRLARRGGV-KRISGLIYEEVRNVLKTFLESVIR 68 (103)
T ss_dssp CCHHHHHHHHHHTTC-CEECTTHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHcCc-cccCHHHHHHHHHHHHHHHHHHHH
Confidence 899998888888898 699999999999999887665543
No 43
>4ham_A LMO2241 protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, winged helix-turn-helix, four helix bundle; 1.91A {Listeria monocytogenes}
Probab=21.51 E-value=30 Score=23.46 Aligned_cols=30 Identities=13% Similarity=0.338 Sum_probs=25.5
Q ss_pred ecCcHHHHHHHHHhcCCceEecCCCChhhhh
Q 033037 51 TSLSTEAILKFLKKKGFDVVISDDAGRFVCN 81 (129)
Q Consensus 51 T~lp~~~l~~~l~~~g~~~~~S~dAG~ylCN 81 (129)
+.-|+.+.++.|...|+ +.....-|.||+.
T Consensus 51 Sr~tVReAl~~L~~eGl-v~~~~g~G~~V~~ 80 (134)
T 4ham_A 51 NPNTVSKAYQELERQEV-IITVKGKGTFIAN 80 (134)
T ss_dssp CHHHHHHHHHHHHHTTS-EEEETTTEEEECC
T ss_pred CHHHHHHHHHHHHHCCc-EEEEcCcEEEEeC
Confidence 67788999999999999 7777888999874
No 44
>2bkr_A Sentrin-specific protease 8; protein-binding-hydrolase complex, ubiquitin, hydrolase, Pro thiol protease, UBL conjugation pathway, ubiquitin/hydrolas complex; 1.90A {Homo sapiens} SCOP: d.3.1.7 PDB: 2bkq_A 1xt9_A
Probab=21.50 E-value=22 Score=26.10 Aligned_cols=20 Identities=25% Similarity=0.175 Sum_probs=17.8
Q ss_pred cCCCChhhhhHHHHHHHHHh
Q 033037 72 SDDAGRFVCNYVYYHSLRFA 91 (129)
Q Consensus 72 S~dAG~ylCN~iyY~sL~~~ 91 (129)
+.|.|-|+|-|+-|-+....
T Consensus 160 ~~DCGvfvl~~~~~l~~~~~ 179 (212)
T 2bkr_A 160 SYDCGMYVICNTEALCQNFF 179 (212)
T ss_dssp SSTHHHHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHHHhh
Confidence 68999999999999888775
No 45
>2f8n_G Core histone macro-H2A.1; nucleosome, NCP, macroh2A, histone variant, chromatin, X- RAY structure, crystallography, structural protein/DNA complex; 2.90A {Homo sapiens} SCOP: a.22.1.1 PDB: 1u35_C
Probab=21.27 E-value=80 Score=21.78 Aligned_cols=42 Identities=17% Similarity=0.233 Sum_probs=35.7
Q ss_pred ecCcHHHHHHHHHhcCCceEecCCCChhhhhHHHHHHHHHhh
Q 033037 51 TSLSTEAILKFLKKKGFDVVISDDAGRFVCNYVYYHSLRFAE 92 (129)
Q Consensus 51 T~lp~~~l~~~l~~~g~~~~~S~dAG~ylCN~iyY~sL~~~~ 92 (129)
..+|+..+-+.|++.++--++|.+|--|+.-.+=|.+-..++
T Consensus 21 LqfPV~ri~R~Lk~~~~a~RV~~~A~VyLaAvLEyL~aEIle 62 (120)
T 2f8n_G 21 VIFPVGRMLRYIKKGHPKYRIGVGAPVYMAAVLEYLTAEILE 62 (120)
T ss_dssp CSSCHHHHHHHHHHHSSSCEECTHHHHHHHHHHHHHHHHHHH
T ss_pred ccCChHHHHHHHHcCccccccccchHHHHHHHHHHHHHHHHH
Confidence 569999999999998877799999999998888887765543
No 46
>2oyp_A Hepatitis A virus cellular receptor 2; TIM-3, T-cell immunoglobulin mucin, signaling protein; 1.95A {Mus musculus} PDB: 3kaa_A*
Probab=21.12 E-value=13 Score=22.85 Aligned_cols=10 Identities=40% Similarity=1.039 Sum_probs=8.6
Q ss_pred CCCChhhhhH
Q 033037 73 DDAGRFVCNY 82 (129)
Q Consensus 73 ~dAG~ylCN~ 82 (129)
.|+|.|.|..
T Consensus 82 ~D~G~Y~C~v 91 (109)
T 2oyp_A 82 DDHGTYCCRI 91 (109)
T ss_dssp GGCEEEEEEE
T ss_pred hhCeEEEEEE
Confidence 6999999965
No 47
>2eny_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.08 E-value=20 Score=22.54 Aligned_cols=28 Identities=25% Similarity=0.201 Sum_probs=16.5
Q ss_pred cCCCChhhhhHHHHHHHHHhhhcCCceEEEEeCCCC
Q 033037 72 SDDAGRFVCNYVYYHSLRFAEQKGHKSLFVHVPLFS 107 (129)
Q Consensus 72 S~dAG~ylCN~iyY~sL~~~~~~~~~~~FVHVP~~~ 107 (129)
..|+|.|.|.. -.....-.+.|..|+..
T Consensus 74 ~~D~G~Y~C~a--------~~~~~~a~L~V~~~p~~ 101 (104)
T 2eny_A 74 PSDAGEVVFSV--------RGLTSKASLIVRERSGP 101 (104)
T ss_dssp TTTCSCEEEEE--------TTEEEEECEEEECCCSS
T ss_pred HHHCEEEEEEE--------CCeeEEEEEEEeCCCcC
Confidence 37999999942 00112334777777653
No 48
>1eaj_A Coxsackie virus and adenovirus receptor; virus/viral protein receptor, immunoglobulin V domain fold, symmetric dimer; 1.35A {Homo sapiens} SCOP: b.1.1.1 PDB: 1f5w_A 2j12_B 2j1k_A 2wbw_B* 2w9l_A* 1rsf_A 1jew_R 1kac_B 1p69_B 1p6a_B
Probab=21.01 E-value=13 Score=23.03 Aligned_cols=10 Identities=30% Similarity=0.853 Sum_probs=8.8
Q ss_pred CCCChhhhhH
Q 033037 73 DDAGRFVCNY 82 (129)
Q Consensus 73 ~dAG~ylCN~ 82 (129)
.|+|.|.|..
T Consensus 99 ~D~G~Y~C~v 108 (126)
T 1eaj_A 99 SDIGTYQCKV 108 (126)
T ss_dssp GGCEEEEEEE
T ss_pred HHCeEEEEEE
Confidence 6999999976
No 49
>1k8r_B Protein kinase BYR2; signal transduction, cancer, GTPase, ubiquitin fold, signaling protein; HET: GNP; 3.00A {Schizosaccharomyces pombe} SCOP: d.15.1.5 PDB: 1i35_A
Probab=20.92 E-value=88 Score=21.41 Aligned_cols=34 Identities=18% Similarity=0.218 Sum_probs=26.1
Q ss_pred cceEEecCcHH-HHHHHHHhcCCc------eEecCCCChhhh
Q 033037 46 EQVIWTSLSTE-AILKFLKKKGFD------VVISDDAGRFVC 80 (129)
Q Consensus 46 ~~~~~T~lp~~-~l~~~l~~~g~~------~~~S~dAG~ylC 80 (129)
-++..++.+.- .+.++|++-|+. |.++++ |++.|
T Consensus 12 TRaVq~~~~y~~~L~~ALkKF~ledpskw~Vcvtqs-sr~~~ 52 (110)
T 1k8r_B 12 TRAVQSRGDYQKTLAIALKKFSLEDASKFIVCVSQS-SRIKL 52 (110)
T ss_dssp EEEEECCSCHHHHHHHHHHHHTCCCTTSEEEEEECS-SSEEE
T ss_pred eEEeeehhhHHHHHHHHHHHcCCCChhHeEEEEecC-ceEEE
Confidence 35667888875 477888887763 788888 99988
No 50
>2q87_A CMRF35-H antigen; all-beta, immunoglobulin, IG-superfamily, IG-V, NKP44-like, natural killer cell IG-like receptor, inhibitory receptor; 1.70A {Homo sapiens}
Probab=20.92 E-value=13 Score=23.41 Aligned_cols=31 Identities=19% Similarity=0.092 Sum_probs=16.2
Q ss_pred CCCChhhhhHHHHHHHHHhhhcCCceEEEEeCC
Q 033037 73 DDAGRFVCNYVYYHSLRFAEQKGHKSLFVHVPL 105 (129)
Q Consensus 73 ~dAG~ylCN~iyY~sL~~~~~~~~~~~FVHVP~ 105 (129)
.|+|.|.|....-.. ... .....-+-|+|||
T Consensus 78 ~DsG~Y~C~~~~~~~-g~~-~~~~~~v~v~V~p 108 (110)
T 2q87_A 78 EDAGTYWCGVDTPWL-QDF-HDPVVEVEVSVFP 108 (110)
T ss_dssp GGCEEEEEEEECTTS-CCB-CCCSEEEEEEEC-
T ss_pred HHCEEEEEEEecCcc-Ccc-CCccEEEEEEEec
Confidence 699999997542110 000 1123456777776
No 51
>3ry0_A Putative tautomerase; oxalocrotonate tautomerase family, isomerase; 1.40A {Streptomyces achromogenes}
Probab=20.81 E-value=68 Score=18.68 Aligned_cols=29 Identities=17% Similarity=0.184 Sum_probs=19.1
Q ss_pred EEEeCCCCCCChHHHHHHHHHHHHHHHhh
Q 033037 100 FVHVPLFSTIDEDTQMQFVATLFEAVAST 128 (129)
Q Consensus 100 FVHVP~~~~~~~e~~~~~v~~li~~la~~ 128 (129)
||+|=.+...+.|...+++..+-+.+.+.
T Consensus 2 ~i~I~~~~Grs~eqk~~L~~~it~~~~~~ 30 (65)
T 3ry0_A 2 LIRVTLLEGRSPQEVAALGEALTAAAHET 30 (65)
T ss_dssp EEEEEEESCCCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEcCCCCHHHHHHHHHHHHHHHHHH
Confidence 34444444566788788888888877753
No 52
>3udw_C Poliovirus receptor; PVR tigit IGSF signal transduction immunology, IGSF, cell SU receptor signalling, glycosylation, membrane protein; HET: NAG; 2.90A {Homo sapiens}
Probab=20.77 E-value=13 Score=22.93 Aligned_cols=10 Identities=30% Similarity=1.099 Sum_probs=8.8
Q ss_pred CCCChhhhhH
Q 033037 73 DDAGRFVCNY 82 (129)
Q Consensus 73 ~dAG~ylCN~ 82 (129)
.|+|.|.|..
T Consensus 89 ~D~G~Y~C~v 98 (118)
T 3udw_C 89 EDEGNYTCLF 98 (118)
T ss_dssp GGCEEEEEEE
T ss_pred HHCeEEEEEE
Confidence 6999999975
No 53
>4ety_A LAIR-1, mlair1, leukocyte-associated immunoglobulin-like receptor; IG-like domain, extra celluar domain, domain swappin nysgrc, structural genomics; 1.90A {Mus musculus}
Probab=20.63 E-value=8.6 Score=26.11 Aligned_cols=11 Identities=27% Similarity=0.752 Sum_probs=9.2
Q ss_pred cCCCChhhhhH
Q 033037 72 SDDAGRFVCNY 82 (129)
Q Consensus 72 S~dAG~ylCN~ 82 (129)
.+|||+|-|.|
T Consensus 72 ~~daG~Y~C~y 82 (118)
T 4ety_A 72 ETITGHYSCIY 82 (118)
T ss_dssp GGGCEEEEEEE
T ss_pred ccCCeEEEEEe
Confidence 47999999964
No 54
>1neu_A Myelin P0 protein; structural protein, glycoprotein, transmembrane, phosphorylation, immunoglobulin fold, signal; 1.90A {Rattus norvegicus} SCOP: b.1.1.1
Probab=20.44 E-value=14 Score=23.38 Aligned_cols=12 Identities=33% Similarity=0.772 Sum_probs=9.8
Q ss_pred CCCChhhhhHHH
Q 033037 73 DDAGRFVCNYVY 84 (129)
Q Consensus 73 ~dAG~ylCN~iy 84 (129)
.|+|.|.|....
T Consensus 91 ~D~G~Y~C~v~~ 102 (124)
T 1neu_A 91 SDNGTFTCDVKN 102 (124)
T ss_dssp GGCEEEEEEEEC
T ss_pred hhCEEEEEEEEc
Confidence 689999997653
No 55
>1u3h_A T-cell receptor alpha-chain; complex, immune system; 2.42A {Mus musculus} SCOP: b.1.1.1 PDB: 1b88_A 1kj2_A* 1kb5_A 1d9k_A*
Probab=25.85 E-value=21 Score=22.55 Aligned_cols=13 Identities=15% Similarity=0.406 Sum_probs=11.2
Q ss_pred CCCChhhhhHHHH
Q 033037 73 DDAGRFVCNYVYY 85 (129)
Q Consensus 73 ~dAG~ylCN~iyY 85 (129)
.|+|.|.|.....
T Consensus 81 ~DsG~Y~C~~~~~ 93 (110)
T 1u3h_A 81 GDSATYFCAASAN 93 (110)
Confidence 6999999998765
No 56
>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.36 E-value=21 Score=21.62 Aligned_cols=10 Identities=30% Similarity=0.813 Sum_probs=8.5
Q ss_pred CCCChhhhhH
Q 033037 73 DDAGRFVCNY 82 (129)
Q Consensus 73 ~dAG~ylCN~ 82 (129)
.|+|.|.|..
T Consensus 74 ~D~G~Y~C~a 83 (99)
T 2yr3_A 74 EDHGTYTCLA 83 (99)
T ss_dssp TCCBCEEEEE
T ss_pred hhCEEEEEEE
Confidence 7899999963
No 57
>2yuv_A Myosin-binding protein C, SLOW-type; SLOW-type myosin-binding protein C, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yxm_A
Probab=20.35 E-value=20 Score=21.89 Aligned_cols=11 Identities=9% Similarity=0.187 Sum_probs=9.7
Q ss_pred cCCCChhhhhH
Q 033037 72 SDDAGRFVCNY 82 (129)
Q Consensus 72 S~dAG~ylCN~ 82 (129)
..|+|.|.|..
T Consensus 72 ~~D~G~Y~C~a 82 (100)
T 2yuv_A 72 MTDDSEYYVTA 82 (100)
T ss_dssp TTTCCEEEEEE
T ss_pred cCcCEEEEEEE
Confidence 48999999987
No 58
>2edf_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.27 E-value=21 Score=21.85 Aligned_cols=12 Identities=33% Similarity=0.747 Sum_probs=9.7
Q ss_pred CCCChhhhhHHH
Q 033037 73 DDAGRFVCNYVY 84 (129)
Q Consensus 73 ~dAG~ylCN~iy 84 (129)
.|+|.|.|...-
T Consensus 73 ~D~G~Y~C~a~n 84 (103)
T 2edf_A 73 KDAGEYTCEVEA 84 (103)
T ss_dssp TTCSEEEEECSS
T ss_pred ccCEEEEEEEcc
Confidence 699999997643
Done!