BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033041
(129 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8L9T5|ATL2_ARATH RING-H2 finger protein ATL2 OS=Arabidopsis thaliana GN=ATL2 PE=2
SV=2
Length = 304
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 93/188 (49%), Gaps = 60/188 (31%)
Query: 1 MDCAVCLSEFEENESGRVLPGCNHSFHIGCIDMWFHSHSTCPLCRTPVE----------- 49
++CAVCLSEFEE+E+GRVLP C H+FH+ CIDMWFHSHSTCPLCR+ VE
Sbjct: 117 IECAVCLSEFEESETGRVLPNCQHTFHVDCIDMWFHSHSTCPLCRSLVESLAGIESTAAA 176
Query: 50 ----LVTAQPEDPV---QPDNPVPVRVSVHEPGSSSI----------------------- 79
+V A DPV +P + + H GSS +
Sbjct: 177 REREVVIAVDSDPVLVIEPSSSSGLTDEPHGSGSSQMLREDSGRKPAAIEVPRRTFSEFE 236
Query: 80 DEPTGCDSSAGQG----SSFVSSFRRMLSREKKGNST----AP-----------GNDVDI 120
DE T DS A Q S + SF RMLSR+++ S+ AP + DI
Sbjct: 237 DELTRRDSPASQSFRSPMSRMLSFTRMLSRDRRSASSPIAGAPPLSPTLSCRIQMTESDI 296
Query: 121 ERGRDETQ 128
ERG +E++
Sbjct: 297 ERGGEESR 304
>sp|Q8LF65|ATL17_ARATH RING-H2 finger protein ATL17 OS=Arabidopsis thaliana GN=ATL17 PE=2
SV=2
Length = 235
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 35/49 (71%), Positives = 45/49 (91%)
Query: 1 MDCAVCLSEFEENESGRVLPGCNHSFHIGCIDMWFHSHSTCPLCRTPVE 49
M+C+VCLSEF++NESGRV+P C H+FH+ CIDMWFHSHS+CPLCR+ +E
Sbjct: 74 MECSVCLSEFKDNESGRVMPNCKHTFHVHCIDMWFHSHSSCPLCRSQIE 122
>sp|Q9LX93|ATL55_ARATH E3 ubiquitin-protein ligase RING1 OS=Arabidopsis thaliana GN=ATL55
PE=1 SV=1
Length = 301
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 52/83 (62%), Gaps = 9/83 (10%)
Query: 2 DCAVCLSEFEENESGRVLPGCNHSFHIGCIDMWFHSHSTCPLCRTPVELVTAQPEDPVQP 61
+C+VCL+EFEE+ES R+LP C+H+FH+ CID W SH CPLCR PV L+T P +
Sbjct: 134 ECSVCLNEFEEDESLRLLPKCSHAFHLNCIDTWLLSHKNCPLCRAPVLLITEPPHQETET 193
Query: 62 DNPVPVRVSVHEPGSSSIDEPTG 84
+ H+P S S ++ G
Sbjct: 194 N---------HQPDSESSNDLRG 207
>sp|Q9LZJ6|ATL5_ARATH RING-H2 finger protein ATL5 OS=Arabidopsis thaliana GN=ATL5 PE=2
SV=1
Length = 257
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 38/64 (59%), Positives = 44/64 (68%), Gaps = 5/64 (7%)
Query: 2 DCAVCLSEFEENESGRVLPGCNHSFHIGCIDMWFHSHSTCPLCRTPVELVTAQPEDPVQP 61
+C+VCLSEFEE++ GRVLP C H FH+ CID WF S S+CPLCR PV QP PV
Sbjct: 112 ECSVCLSEFEEDDEGRVLPKCGHVFHVDCIDTWFRSRSSCPLCRAPV-----QPAQPVTE 166
Query: 62 DNPV 65
PV
Sbjct: 167 PEPV 170
>sp|Q9SL78|ATL12_ARATH Putative RING-H2 finger protein ATL12 OS=Arabidopsis thaliana
GN=ATL12 PE=3 SV=1
Length = 390
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 67/117 (57%), Gaps = 10/117 (8%)
Query: 1 MDCAVCLSEFEENESGRVLPGCNHSFHIGCIDMWFHSHSTCPLCRTPVELVTAQPEDPVQ 60
++C+VCLS+FE+ E R+LP C H+FHIGCID W H+TCPLCR V + + + V
Sbjct: 122 LECSVCLSKFEDVEILRLLPKCRHAFHIGCIDQWLEQHATCPLCRNRVNI---EDDLSVL 178
Query: 61 PDNPVPVRV---SVHEPGSSSIDEPTGCDSSAGQGSSFVSSFRRMLSR----EKKGN 110
++ +R+ S S ++ + GSS SSFR++L + E++GN
Sbjct: 179 GNSSTSLRILNQSETREEDSRLEIYIEREEGTNDGSSRFSSFRKILKKSLLLEREGN 235
>sp|Q9SRQ8|ATL51_ARATH RING-H2 finger protein ATL51 OS=Arabidopsis thaliana GN=ATL51 PE=2
SV=2
Length = 356
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 47/70 (67%), Gaps = 6/70 (8%)
Query: 2 DCAVCLSEFEENESGRVLPGCNHSFHIGCIDMWFHSHSTCPLCR------TPVELVTAQP 55
DC+VCLSEF+ENES R+LP CNH+FH+ CID W SHS CPLCR + VE+V
Sbjct: 158 DCSVCLSEFQENESLRLLPKCNHAFHVPCIDTWLKSHSNCPLCRAFIVTSSAVEIVDLTN 217
Query: 56 EDPVQPDNPV 65
+ V +N +
Sbjct: 218 QQIVTENNSI 227
>sp|Q9LF64|ATL52_ARATH RING-H2 finger protein ATL52 OS=Arabidopsis thaliana GN=ATL52 PE=2
SV=1
Length = 362
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 44/80 (55%), Positives = 50/80 (62%), Gaps = 4/80 (5%)
Query: 2 DCAVCLSEFEENESGRVLPGCNHSFHIGCIDMWFHSHSTCPLCRTPVELVTAQPEDPVQP 61
DC+VCLSEFEENES R+LP CNH+FH+ CID W SHS CPLCR V V P V
Sbjct: 141 DCSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLKSHSNCPLCRAFVTGVN-NPTASVGQ 199
Query: 62 DNPVPV---RVSVHEPGSSS 78
+ V V S H+ GS S
Sbjct: 200 NVSVVVANQSNSAHQTGSVS 219
>sp|Q8LFY8|ATL54_ARATH RING-H2 finger protein ATL54 OS=Arabidopsis thaliana GN=ATL54 PE=2
SV=2
Length = 413
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 48/76 (63%), Gaps = 8/76 (10%)
Query: 2 DCAVCLSEFEENESGRVLPGCNHSFHIGCIDMWFHSHSTCPLCRTPVELVTAQPEDPVQP 61
DC VCL+EFEE+ES R+LP CNH+FHI CID W SH+ CPLCR + +++ P
Sbjct: 176 DCPVCLNEFEEDESLRLLPKCNHAFHISCIDTWLSSHTNCPLCRAGIAMISV-----TTP 230
Query: 62 DNPVPVRVSVHEPGSS 77
PV V+ PG S
Sbjct: 231 RYSGPVEVT---PGGS 243
>sp|O22255|ATL64_ARATH RING-H2 finger protein ATL64 OS=Arabidopsis thaliana GN=ATL64 PE=2
SV=1
Length = 227
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 33/47 (70%), Positives = 38/47 (80%)
Query: 3 CAVCLSEFEENESGRVLPGCNHSFHIGCIDMWFHSHSTCPLCRTPVE 49
C+VCLSEFEE + GR+LP C HSFH+ CID WF S STCPLCR PV+
Sbjct: 108 CSVCLSEFEEEDEGRLLPKCGHSFHVDCIDTWFRSRSTCPLCRAPVQ 154
>sp|Q9SLC4|ATL40_ARATH RING-H2 finger protein ATL40 OS=Arabidopsis thaliana GN=ATL40 PE=2
SV=1
Length = 217
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 65/128 (50%), Gaps = 17/128 (13%)
Query: 2 DCAVCLSEFEENESGRVLPGCNHSFHIGCIDMWFHSHSTCPLCRTPVELVTAQPEDPVQP 61
+CAVCLS EE ++ R+LP C H FH+ C+D W + STCP+CRT A+P P
Sbjct: 99 ECAVCLSLLEEKDNARMLPNCKHVFHVSCVDTWLTTQSTCPVCRT-----EAEPSHPRLE 153
Query: 62 DNPVPVRVSVHEP--GSSSIDEPTGCDSSAGQGSSFVSSFRRMLSREKKGN-----STAP 114
P V P + +D TG G S + SFRR+L+RE+ N
Sbjct: 154 PEPREGPVGDFAPPLDFAGVDNKTG-----GSSVSRLDSFRRILTRERSSNRRDHSRVDQ 208
Query: 115 GNDVDIER 122
++DIER
Sbjct: 209 DRELDIER 216
>sp|Q8W571|ATL32_ARATH RING-H2 finger protein ATL32 OS=Arabidopsis thaliana GN=ATL32 PE=2
SV=3
Length = 323
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 49/67 (73%), Gaps = 3/67 (4%)
Query: 1 MDCAVCLSEFEENESGRVLPGCNHSFHIGCIDMWFHSHSTCPLCRTPVELVTAQPEDPVQ 60
++CA+CL+E E++E+ R+LP CNH FHI CID W +SH+TCP+CR+ +TA+ P
Sbjct: 122 LECAICLNELEDHETVRLLPICNHLFHIDCIDTWLYSHATCPVCRSN---LTAKSNKPGD 178
Query: 61 PDNPVPV 67
D+ VP+
Sbjct: 179 EDDGVPL 185
>sp|P0C035|ATL60_ARATH RING-H2 finger protein ATL60 OS=Arabidopsis thaliana GN=ATL60 PE=2
SV=1
Length = 310
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 31/48 (64%), Positives = 37/48 (77%)
Query: 1 MDCAVCLSEFEENESGRVLPGCNHSFHIGCIDMWFHSHSTCPLCRTPV 48
++CAVCLS+ + + RVLP CNH FH+ CIDMWF SHSTCPLCR V
Sbjct: 118 LECAVCLSDLVDGDKARVLPRCNHGFHVDCIDMWFQSHSTCPLCRNTV 165
>sp|Q9XF63|ATL3_ARATH RING-H2 finger protein ATL3 OS=Arabidopsis thaliana GN=ATL3 PE=2
SV=1
Length = 324
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 38/48 (79%)
Query: 1 MDCAVCLSEFEENESGRVLPGCNHSFHIGCIDMWFHSHSTCPLCRTPV 48
++C++CLSE + + R+LP CNHSFH+ CIDMWF SHSTCP+CR V
Sbjct: 125 LECSICLSELVKGDKARLLPKCNHSFHVECIDMWFQSHSTCPICRNTV 172
>sp|P0C041|ATL53_ARATH Putative RING-H2 finger protein ATL53 OS=Arabidopsis thaliana
GN=ATL53 PE=3 SV=2
Length = 310
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 42/59 (71%), Gaps = 1/59 (1%)
Query: 2 DCAVCLSEFEENESGRVLPGCNHSFHIGCIDMWFHSHSTCPLCRTPVEL-VTAQPEDPV 59
DC++CL EF E+ES R+LP CNH+FH+ CID W SHS CPLCR + + T QPE V
Sbjct: 154 DCSICLGEFNEDESLRLLPKCNHTFHVVCIDRWLKSHSNCPLCRAKIIVPTTQQPEHHV 212
>sp|Q5XF85|ATL42_ARATH E3 ubiquitin-protein ligase ATL42 OS=Arabidopsis thaliana GN=ATL42
PE=1 SV=2
Length = 432
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 37/50 (74%)
Query: 1 MDCAVCLSEFEENESGRVLPGCNHSFHIGCIDMWFHSHSTCPLCRTPVEL 50
+DC+VCLS+FE E R+LP C H+FHIGCID W H+TCPLCR V +
Sbjct: 121 LDCSVCLSKFESVEILRLLPKCRHAFHIGCIDQWLEQHATCPLCRDRVSM 170
>sp|Q9LSW9|ATL16_ARATH RING-H2 finger protein ATL16 OS=Arabidopsis thaliana GN=ATL16 PE=2
SV=1
Length = 375
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 53/85 (62%), Gaps = 9/85 (10%)
Query: 2 DCAVCLSEFEENESGRVLPGCNHSFHIGCIDMWFHSHSTCPLCRTPVELVTAQPEDPV-- 59
+C+VCLSEF++ E R++P C+H FHI CID+W +++ CPLCRT V T+ P D V
Sbjct: 137 ECSVCLSEFQDEEKLRIIPNCSHLFHIDCIDVWLQNNANCPLCRTRVSCDTSFPPDRVSA 196
Query: 60 ---QPDNPVPVR----VSVHEPGSS 77
P+N V +R V E GSS
Sbjct: 197 PSTSPENLVMLRGENEYVVIELGSS 221
>sp|Q940Q4|ATL13_ARATH RING-H2 finger protein ATL13 OS=Arabidopsis thaliana GN=ATL13 PE=2
SV=2
Length = 472
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 40/58 (68%)
Query: 1 MDCAVCLSEFEENESGRVLPGCNHSFHIGCIDMWFHSHSTCPLCRTPVELVTAQPEDP 58
DCAVCL EFE + R+LP C+H+FH+ CID W SHSTCPLCR+ + + +DP
Sbjct: 132 FDCAVCLCEFETEDKLRLLPKCSHAFHMDCIDTWLLSHSTCPLCRSSLLSDLSSHQDP 189
>sp|Q7XLY8|ATL41_ORYSJ E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp.
japonica GN=Os04g0590900 PE=2 SV=2
Length = 383
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 2 DCAVCLSEFEENESGRVLPGCNHSFHIGCIDMWFHSHSTCPLCRTPVELVTAQPEDPVQP 61
DC+VCL EF + ES R+LP C+H+FH CID W SHS CPLCR + VT P +P
Sbjct: 156 DCSVCLGEFSDGESLRLLPRCSHAFHQQCIDTWLKSHSNCPLCRANITFVTVGLASP-EP 214
Query: 62 DNPVP 66
+ P
Sbjct: 215 EGCAP 219
>sp|Q9SLC3|ATL41_ARATH E3 ubiquitin-protein ligase ATL41 OS=Arabidopsis thaliana GN=ATL41
PE=1 SV=1
Length = 236
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/134 (38%), Positives = 71/134 (52%), Gaps = 18/134 (13%)
Query: 2 DCAVCLSEFEENESGRVLPGCNHSFHIGCIDMWFHSHSTCPLCRTPVE----LVTAQPED 57
+CAVCLS +E + R LP C H FH+ C+D W + STCP+CRT VE L E
Sbjct: 107 ECAVCLSVLKEQDKARELPNCKHIFHVDCVDTWLTTCSTCPVCRTEVEPRPRLEPEPREG 166
Query: 58 PV--QPDNPVPVR--VSVHEPGSSSIDEPTGCDSSAGQGSSFVSSFRRMLSREK---KGN 110
PV P V R ++V SSS D T +S ++SFR++L+RE+ + N
Sbjct: 167 PVGTAPQLLVETRLNLTVEAASSSSSDNKT-----VVSPASRLNSFRKILTRERSSNRIN 221
Query: 111 STAPGND--VDIER 122
+ P D D+ER
Sbjct: 222 HSCPDQDRVADLER 235
>sp|Q8GW38|ATL47_ARATH RING-H2 finger protein ATL47 OS=Arabidopsis thaliana GN=ATL47 PE=2
SV=1
Length = 369
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 40/58 (68%)
Query: 1 MDCAVCLSEFEENESGRVLPGCNHSFHIGCIDMWFHSHSTCPLCRTPVELVTAQPEDP 58
DCAVCL EF E++ R+LP C+H+FHI CID W S+STCPLCR + + Q E P
Sbjct: 142 FDCAVCLCEFSEDDKLRLLPNCSHAFHIDCIDTWLLSNSTCPLCRGTLFSLGHQFEYP 199
>sp|Q8LGA5|ATL31_ARATH E3 ubiquitin-protein ligase ATL31 OS=Arabidopsis thaliana GN=ATL31
PE=1 SV=2
Length = 368
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 43/62 (69%)
Query: 1 MDCAVCLSEFEENESGRVLPGCNHSFHIGCIDMWFHSHSTCPLCRTPVELVTAQPEDPVQ 60
++CA+CL+EFE++E+ R+LP C+H FH CI W H TCP+CRT + T +PE V+
Sbjct: 122 LECAICLNEFEDDETLRLLPKCDHVFHPHCIGAWLQGHVTCPVCRTNLAEQTPEPEVVVE 181
Query: 61 PD 62
D
Sbjct: 182 TD 183
>sp|Q67YI6|ATL65_ARATH RING-H2 finger protein ATL65 OS=Arabidopsis thaliana GN=ATL65 PE=2
SV=2
Length = 411
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 2 DCAVCLSEFEENESGRVLPGCNHSFHIGCIDMWFHSHSTCPLCRTPVELVTAQPEDPVQP 61
DCAVCL EFEE + R LP C H+FH+ CID W SH CPLCRT + L +A P+ P
Sbjct: 155 DCAVCLLEFEEGDYVRTLPLCFHAFHLECIDEWLRSHPNCPLCRTAI-LGSAGVLTPMSP 213
Query: 62 DNPV 65
P+
Sbjct: 214 FVPL 217
>sp|Q9LRB7|EL5_ORYSJ E3 ubiquitin-protein ligase EL5 OS=Oryza sativa subsp. japonica
GN=EL5.1 PE=1 SV=1
Length = 325
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 33/45 (73%)
Query: 1 MDCAVCLSEFEENESGRVLPGCNHSFHIGCIDMWFHSHSTCPLCR 45
++CAVCL+E E+ E R LP C H FH C+DMW SHSTCPLCR
Sbjct: 132 VECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGSHSTCPLCR 176
>sp|Q5EAE9|ATL43_ARATH RING-H2 finger protein ATL43 OS=Arabidopsis thaliana GN=ATL43 PE=2
SV=2
Length = 407
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 39/57 (68%), Gaps = 5/57 (8%)
Query: 1 MDCAVCLSEFEENESGRVLPGCNHSFHIGCIDMWFHSHSTCPLCRTPVELVTAQPED 57
++CAVCL+ FE E R+LP C H+FH+ C+D W +HSTCPLCR V+ PED
Sbjct: 144 LECAVCLARFEPTEVLRLLPKCKHAFHVECVDTWLDAHSTCPLCRYRVD-----PED 195
>sp|Q9FL07|ATL46_ARATH RING-H2 finger protein ATL46 OS=Arabidopsis thaliana GN=ATL46 PE=2
SV=1
Length = 376
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 34/45 (75%)
Query: 1 MDCAVCLSEFEENESGRVLPGCNHSFHIGCIDMWFHSHSTCPLCR 45
DCAVCL EF E + R+LP C+H+FH+ CID W S+STCPLCR
Sbjct: 141 FDCAVCLCEFSEKDKLRLLPMCSHAFHLNCIDTWLQSNSTCPLCR 185
>sp|Q84W40|ATL11_ARATH RING-H2 finger protein ATL11 OS=Arabidopsis thaliana GN=ATL11 PE=2
SV=2
Length = 404
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 61/105 (58%), Gaps = 18/105 (17%)
Query: 1 MDCAVCLSEFEENESGRVLPGCNHSFHIGCIDMWFHSHSTCPLCRTPVELVTAQPEDPVQ 60
++C+VCL+EFE++E+ R++P C H FH GCID W SH+TCPLCR +L+
Sbjct: 142 LECSVCLNEFEDDETLRLIPKCCHVFHPGCIDAWLRSHTTCPLCR--ADLI--------- 190
Query: 61 PDNPVPVR--VSVHEPGSSSIDEPTGCDSSAGQGSSFVSSFRRML 103
PVP VS+ PG +++P G D + + S S R++
Sbjct: 191 ---PVPGESIVSIQIPG--LVNDPPGSDPNGDRIRSLGSPDARLI 230
>sp|Q9ZV53|ATL49_ARATH Putative RING-H2 finger protein ATL49 OS=Arabidopsis thaliana
GN=ATL49 PE=3 SV=1
Length = 423
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 35/48 (72%)
Query: 1 MDCAVCLSEFEENESGRVLPGCNHSFHIGCIDMWFHSHSTCPLCRTPV 48
DC VCL EFE + R+LP C+H+FH+ CID W SHSTCPLCR+ +
Sbjct: 124 FDCPVCLCEFETEDKLRLLPKCSHAFHVECIDTWLLSHSTCPLCRSNL 171
>sp|Q9LUZ9|ATL63_ARATH RING-H2 finger protein ATL63 OS=Arabidopsis thaliana GN=ATL63 PE=2
SV=1
Length = 308
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 37/63 (58%)
Query: 3 CAVCLSEFEENESGRVLPGCNHSFHIGCIDMWFHSHSTCPLCRTPVELVTAQPEDPVQPD 62
C +CL +E + GR L C H FH+ CIDMW SHSTCPLCR+PV + E+
Sbjct: 138 CVICLGLWEAGDFGRKLRNCGHGFHVECIDMWLSSHSTCPLCRSPVLAAVSDEENLKLAV 197
Query: 63 NPV 65
N V
Sbjct: 198 NAV 200
>sp|P93823|ATL1_ARATH RING-H2 finger protein ATL1 OS=Arabidopsis thaliana GN=ATL1 PE=2
SV=1
Length = 381
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 36/47 (76%)
Query: 2 DCAVCLSEFEENESGRVLPGCNHSFHIGCIDMWFHSHSTCPLCRTPV 48
+C+VCL+EF+E+E R++P C H FHI CID+W ++ CPLCRT V
Sbjct: 133 ECSVCLNEFQEDEKLRIIPNCCHVFHIDCIDIWLQGNANCPLCRTSV 179
>sp|Q7X843|ATL48_ARATH RING-H2 finger protein ATL48 OS=Arabidopsis thaliana GN=ATL48 PE=2
SV=2
Length = 349
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 35/45 (77%)
Query: 1 MDCAVCLSEFEENESGRVLPGCNHSFHIGCIDMWFHSHSTCPLCR 45
DCAVCL+EF + + R+LP C+H+FH+ CID W S+STCPLCR
Sbjct: 205 FDCAVCLNEFSDTDKLRLLPVCSHAFHLHCIDTWLLSNSTCPLCR 249
>sp|Q8RXX9|ATL6_ARATH E3 ubiquitin-protein ligase ATL6 OS=Arabidopsis thaliana GN=ATL6
PE=1 SV=2
Length = 398
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 1 MDCAVCLSEFEENESGRVLPGCNHSFHIGCIDMWFHSHSTCPLCRTPVELVTAQPEDPVQ 60
++CA+CL+EFE++E+ R+LP C+H FH CID W +H TCP+CR + A+ E V+
Sbjct: 126 LECAICLNEFEDDETLRLLPKCDHVFHPHCIDAWLEAHVTCPVCRANLAEQVAEGES-VE 184
Query: 61 PDNPVP 66
P P
Sbjct: 185 PGGTEP 190
>sp|Q9M0R5|ATL36_ARATH Putative RING-H2 finger protein ATL36 OS=Arabidopsis thaliana
GN=ATL36 PE=3 SV=1
Length = 345
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 38/50 (76%)
Query: 1 MDCAVCLSEFEENESGRVLPGCNHSFHIGCIDMWFHSHSTCPLCRTPVEL 50
++CA+CLSEFE+ E+ R +P C+H+FH CID+W S STCP+CR + L
Sbjct: 121 VECAICLSEFEDQETLRWMPPCSHTFHANCIDVWLSSWSTCPVCRANLSL 170
>sp|Q9SJJ7|ATL57_ARATH RING-H2 finger protein ATL57 OS=Arabidopsis thaliana GN=ATL57 PE=2
SV=1
Length = 237
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 34/45 (75%)
Query: 2 DCAVCLSEFEENESGRVLPGCNHSFHIGCIDMWFHSHSTCPLCRT 46
DC +CLS+FEE E+ +V+P C H FH+ C+D W S+ TCPLCR+
Sbjct: 139 DCVICLSDFEEGETVKVIPHCGHVFHVDCVDTWLSSYVTCPLCRS 183
>sp|Q9FLC6|ATL73_ARATH RING-H2 finger protein ATL73 OS=Arabidopsis thaliana GN=ATL73 PE=2
SV=1
Length = 176
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 32/44 (72%)
Query: 2 DCAVCLSEFEENESGRVLPGCNHSFHIGCIDMWFHSHSTCPLCR 45
+C +CL +F E E+ RVLP CNH FH+ CID W SHS+CP CR
Sbjct: 112 ECLICLGDFVEGETVRVLPKCNHGFHVKCIDTWLLSHSSCPTCR 155
>sp|Q9LY41|ATL4_ARATH E3 ubiquitin-protein ligase ATL4 OS=Arabidopsis thaliana GN=ATL4
PE=1 SV=1
Length = 334
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 36/47 (76%)
Query: 2 DCAVCLSEFEENESGRVLPGCNHSFHIGCIDMWFHSHSTCPLCRTPV 48
DCAVCLS+FE + R+LP C H+FH CID+W S+ TCPLCR+P+
Sbjct: 116 DCAVCLSKFEPEDQLRLLPLCCHAFHADCIDIWLVSNQTCPLCRSPL 162
>sp|O64763|ATL9_ARATH E3 ubiquitin-protein ligase ATL9 OS=Arabidopsis thaliana GN=ATL9
PE=1 SV=1
Length = 378
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 40/57 (70%), Gaps = 2/57 (3%)
Query: 1 MDCAVCLSEFEENESGRVLPGCNHSFHIGCIDMWFHSHSTCPLCRTPVELVTAQPED 57
++CAVCL EFE++E+ R++P C H FH C+D+W HSTCPLCR +LV Q D
Sbjct: 133 VECAVCLCEFEDDETLRLMPPCCHVFHADCVDVWLSEHSTCPLCR--ADLVLNQQGD 187
>sp|Q9SK92|ATL15_ARATH E3 ubiquitin-protein ligase ATL15 OS=Arabidopsis thaliana GN=ATL15
PE=1 SV=1
Length = 381
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 47/93 (50%), Gaps = 22/93 (23%)
Query: 1 MDCAVCLSEFEENESGRVLPGCNHSFHIGCIDMWFHSHSTCPLCRTPVELVTAQPEDPVQ 60
++C VCL+EFE++E+ R++P C H FH GCID W S +TCPLCR
Sbjct: 116 LECPVCLNEFEDDETLRLIPQCCHVFHPGCIDAWLRSQTTCPLCRA-------------- 161
Query: 61 PDNPVPVRVSVHEPGSSSIDEPTGCDSSAGQGS 93
N VPV PG S E G GQ S
Sbjct: 162 --NLVPV------PGESVSSEIPGLARETGQNS 186
>sp|Q9C7I1|ATL34_ARATH RING-H2 finger protein ATL34 OS=Arabidopsis thaliana GN=ATL34 PE=2
SV=1
Length = 327
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 38/48 (79%)
Query: 1 MDCAVCLSEFEENESGRVLPGCNHSFHIGCIDMWFHSHSTCPLCRTPV 48
++CA+CL+EFE+ E+ R++P C+H+FH CID+W S STCP+CR +
Sbjct: 126 VECAICLNEFEDEETLRLMPPCSHAFHASCIDVWLSSRSTCPVCRASL 173
>sp|Q9M0R6|ATL35_ARATH Putative RING-H2 finger protein ATL35 OS=Arabidopsis thaliana
GN=ATL35 PE=3 SV=1
Length = 302
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 46/81 (56%), Gaps = 9/81 (11%)
Query: 1 MDCAVCLSEFEENESGRVLPGCNHSFHIGCIDMWFHSHSTCPLCRTPVELVTAQPEDPVQ 60
++CA+CLSEF + E+ R +P C+H+FH CID+W S STCP CR + L +
Sbjct: 121 VECAICLSEFVDKETLRWMPPCSHTFHANCIDVWLSSQSTCPACRANLSL---------K 171
Query: 61 PDNPVPVRVSVHEPGSSSIDE 81
P P ++ E G+ DE
Sbjct: 172 PGESYPYPITDLETGNEQRDE 192
>sp|Q9LZV8|ATL74_ARATH RING-H2 finger protein ATL74 OS=Arabidopsis thaliana GN=ATL74 PE=2
SV=1
Length = 159
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 2 DCAVCLSEFEENESGRVLPGCNHSFHIGCIDMWFHSHSTCPLCR-TPVELVTAQPE 56
+CA+CL EF + E RVLP CNHSFH+ CID W SHS+CP CR + +E+ A E
Sbjct: 104 ECAICLGEFADGERVRVLPPCNHSFHMSCIDTWLVSHSSCPNCRHSLIEVHVAGSE 159
>sp|Q9FHG8|ATL50_ARATH Putative RING-H2 finger protein ATL50 OS=Arabidopsis thaliana
GN=ATL50 PE=3 SV=1
Length = 210
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 33/44 (75%)
Query: 2 DCAVCLSEFEENESGRVLPGCNHSFHIGCIDMWFHSHSTCPLCR 45
DCAVCL EF + R+LP C+H+FH+ CID W ++STCPLCR
Sbjct: 121 DCAVCLREFTAEDELRLLPKCSHAFHVECIDTWLLTNSTCPLCR 164
>sp|Q9SG96|ATL72_ARATH RING-H2 finger protein ATL72 OS=Arabidopsis thaliana GN=ATL72 PE=2
SV=1
Length = 181
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 33/49 (67%)
Query: 2 DCAVCLSEFEENESGRVLPGCNHSFHIGCIDMWFHSHSTCPLCRTPVEL 50
+C +CL +FE+ E RVLP CNH FH+ CID W S S+CP CR + L
Sbjct: 113 ECLICLGDFEDGEKVRVLPKCNHGFHVRCIDTWLLSRSSCPTCRQSLLL 161
>sp|Q9LUL6|ATL61_ARATH Putative RING-H2 finger protein ATL61 OS=Arabidopsis thaliana
GN=ATL61 PE=3 SV=1
Length = 204
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 35/50 (70%)
Query: 1 MDCAVCLSEFEENESGRVLPGCNHSFHIGCIDMWFHSHSTCPLCRTPVEL 50
++C VCLSE + + RVLP C+H FH+ CID W S+STCP+CR V L
Sbjct: 86 LECVVCLSELADGDKARVLPSCDHWFHVECIDSWLQSNSTCPICRKRVCL 135
>sp|Q8H7N9|ATL31_ORYSJ E3 ubiquitin-protein ligase Os03g0188200 OS=Oryza sativa subsp.
japonica GN=Os03g0188200 PE=2 SV=1
Length = 353
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 39/66 (59%), Gaps = 5/66 (7%)
Query: 1 MDCAVCLSEFEENESGRVLPGCNHSFHIGCIDMWFHSHSTCPLCRT-----PVELVTAQP 55
++CAVCL+EF +++ RVLP C H FH CID W + TCPLCR PV L A+
Sbjct: 131 LECAVCLAEFADSDELRVLPACCHVFHPDCIDPWLAAAVTCPLCRANLTAPPVSLAAAES 190
Query: 56 EDPVQP 61
D P
Sbjct: 191 SDLTAP 196
>sp|Q9LQM2|ATL81_ARATH RING-H2 finger protein ATL81 OS=Arabidopsis thaliana GN=ATL81 PE=2
SV=1
Length = 332
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 43/65 (66%), Gaps = 5/65 (7%)
Query: 3 CAVCLSEFEENESGRVLPGCNHSFHIGCIDMWFHSHSTCPLCRTPVELVTAQPEDPVQPD 62
C++CL+EF ++++ R++ CNHSFH CID+WF H TCP+CR +++ ED +
Sbjct: 154 CSICLTEFMDDDTIRLISTCNHSFHTICIDLWFEGHKTCPVCRRELDV-----EDRTSLE 208
Query: 63 NPVPV 67
P+ V
Sbjct: 209 KPLEV 213
>sp|Q570X5|ATL58_ARATH RING-H2 finger protein ATL58 OS=Arabidopsis thaliana GN=ATL58 PE=2
SV=1
Length = 261
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 48/75 (64%), Gaps = 4/75 (5%)
Query: 3 CAVCLSEFEENESGRVLPGCNHSFHIGCIDMWFHSHSTCPLCRTPVELVTAQPEDPVQPD 62
C+VCL +++ N+ + +P C H+FH+ CID+W SH+TCPLCR + L+ ++ D
Sbjct: 100 CSVCLGDYQPNDKLQQIPVCKHTFHMDCIDLWLTSHTTCPLCR--LALIPSRSRQ--SQD 155
Query: 63 NPVPVRVSVHEPGSS 77
+PVP VS E SS
Sbjct: 156 DPVPSLVSPDEEVSS 170
>sp|Q9LM69|ATL80_ARATH RING-H2 finger protein ATL80 OS=Arabidopsis thaliana GN=ATL80 PE=1
SV=1
Length = 197
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 31/44 (70%)
Query: 2 DCAVCLSEFEENESGRVLPGCNHSFHIGCIDMWFHSHSTCPLCR 45
+CA+CL+EF + RVLP C H FH+ CID W SHS+CP CR
Sbjct: 110 ECAICLAEFSAGDELRVLPQCGHGFHVACIDTWLGSHSSCPSCR 153
>sp|Q8LC69|ATL8_ARATH RING-H2 finger protein ATL8 OS=Arabidopsis thaliana GN=ATL8 PE=2
SV=2
Length = 185
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 32/45 (71%)
Query: 1 MDCAVCLSEFEENESGRVLPGCNHSFHIGCIDMWFHSHSTCPLCR 45
++CA+CL+EF + RVLP C H FH+ CID W SHS+CP CR
Sbjct: 102 VECAICLTEFAAGDELRVLPQCGHGFHVSCIDTWLGSHSSCPSCR 146
>sp|Q9ZT49|ATL45_ARATH RING-H2 finger protein ATL45 OS=Arabidopsis thaliana GN=ATL45 PE=2
SV=1
Length = 200
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 33/44 (75%)
Query: 2 DCAVCLSEFEENESGRVLPGCNHSFHIGCIDMWFHSHSTCPLCR 45
+CA+C++EF E E R+LP C+H+FH+ CID W S S+CP CR
Sbjct: 112 ECAICITEFSEGEEIRILPLCSHAFHVACIDKWLTSRSSCPSCR 155
>sp|P0C034|ATL10_ARATH RING-H2 finger protein ATL10 OS=Arabidopsis thaliana GN=ATL10 PE=2
SV=1
Length = 251
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 48/99 (48%), Gaps = 21/99 (21%)
Query: 2 DCAVCLSEFEENESGRVLPGCNHSFHIGCIDMWFHSHSTCPLCR--------------TP 47
+C +CLS+F E R+LP CNH FH+ CID W H TCP CR +
Sbjct: 134 ECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQQHLTCPKCRNCLVETCQKILGDFSQ 193
Query: 48 VELVTAQPED-------PVQPDNPVPVRVSVHEPGSSSI 79
+ VTA+P + P++P V V ++ EP I
Sbjct: 194 ADSVTAEPTEIVIVTIVPLEPTEIVIVTIAPLEPTEIVI 232
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.132 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,050,190
Number of Sequences: 539616
Number of extensions: 2133175
Number of successful extensions: 7293
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 343
Number of HSP's successfully gapped in prelim test: 209
Number of HSP's that attempted gapping in prelim test: 6798
Number of HSP's gapped (non-prelim): 581
length of query: 129
length of database: 191,569,459
effective HSP length: 95
effective length of query: 34
effective length of database: 140,305,939
effective search space: 4770401926
effective search space used: 4770401926
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)