BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033042
(128 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9ZS51|PMP22_ARATH Peroxisomal membrane protein PMP22 OS=Arabidopsis thaliana GN=PMP22
PE=1 SV=1
Length = 190
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 58/126 (46%), Positives = 84/126 (66%), Gaps = 1/126 (0%)
Query: 1 MLFDFGYGVPFGHFLNKFLDAIFKGR-DNKSVAKKVLLEQLIFSPWINFLFMTYFGLVVE 59
++F G+ P GHF + +LD FKG+ D ++VAKKV+LEQL SP + LFM Y+G+V+E
Sbjct: 59 VIFAGGFLGPAGHFFHTYLDKFFKGKKDTQTVAKKVILEQLTLSPLNHLLFMIYYGVVIE 118
Query: 60 GKPWGSVMKKVRKDYPAVQFTSWKVWPTVTWVNFQYAPQQFRELFFSLVASCWAIFINLK 119
PW V ++++K YP VQ T+W +P V W+N++Y P FR + SLVA W IF+ L+
Sbjct: 119 RTPWTLVRERIKKTYPTVQLTAWTFFPVVGWINYKYVPLHFRVILHSLVAFFWGIFLTLR 178
Query: 120 AESAAI 125
A S +
Sbjct: 179 ARSMTL 184
>sp|Q54GD8|PX24C_DICDI PXMP2/4 family protein 3 OS=Dictyostelium discoideum
GN=DDB_G0290223 PE=3 SV=1
Length = 184
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 65/113 (57%), Gaps = 3/113 (2%)
Query: 10 PFGHFLNKFLDAIFKG-RDNKSVAKKVLLEQLIFSPWINFLFMTYFGLVVEGKPWGSVMK 68
P H+ + LD +FK +D K++++QL+F+P+IN F + +++GKP + K
Sbjct: 70 PLVHYWHIILDRLFKNIKDKYQSWGKLIVDQLVFAPFINIAFYSVLA-ILDGKPKSILFK 128
Query: 69 KVRKDYPAVQFTSWKVWPTVTWVNFQYAPQQFRELFFSLVASCWAIFINLKAE 121
+P ++ SWKVWP +NF++ P R LF +LV CW I++++ A
Sbjct: 129 LYFDLFPTLK-ASWKVWPLAQLINFRFVPSHLRVLFGNLVGFCWGIYLSILAT 180
>sp|Q54FR4|PX24D_DICDI PXMP2/4 family protein 4 OS=Dictyostelium discoideum
GN=DDB_G0290631 PE=3 SV=1
Length = 185
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 60/114 (52%), Gaps = 3/114 (2%)
Query: 5 FGYGV--PFGHFLNKFLDAIFKGRDNKSVAKKVLLEQLIFSPWINFLFMTYFGLVVEGKP 62
FG+ V P H+ K+LD F + + K+ ++Q++ SP NFLF + G ++EGK
Sbjct: 66 FGFAVTGPLFHYWFKYLDKHFPKKSYRHAFIKLTIDQVVCSPVFNFLFFSGMG-ILEGKS 124
Query: 63 WGSVMKKVRKDYPAVQFTSWKVWPTVTWVNFQYAPQQFRELFFSLVASCWAIFI 116
+++K++KD+ + VWP + +VNF Y R F ++ W F+
Sbjct: 125 KDDIVEKLKKDWLTTYVSDCVVWPFINFVNFAYISSIHRVTFMNVCNIGWGAFL 178
>sp|Q6DGV7|M17L2_DANRE Mpv17-like protein 2 OS=Danio rerio GN=mpv17l2 PE=2 SV=1
Length = 199
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 56/108 (51%), Gaps = 1/108 (0%)
Query: 10 PFGHFLNKFLDAIFKGRDNKSVAKKVLLEQLIFSPWINFLFMTYFGLVVEGKPWGSVMKK 69
PF H+ ++LD F G +V KKVL++QL+ SP + + G++ EG + ++
Sbjct: 75 PFMHYWYQWLDKYFIGNGINNVCKKVLVDQLVASPTLGAWYFLGMGMM-EGHTFIEAQQE 133
Query: 70 VRKDYPAVQFTSWKVWPTVTWVNFQYAPQQFRELFFSLVASCWAIFIN 117
R + W VWP +NF + P +FR L+ ++V W +++
Sbjct: 134 FRDKFWEFYKADWCVWPAAQMINFYFLPPKFRVLYVNIVTLGWDTYLS 181
>sp|Q54XX9|PX24B_DICDI PXMP2/4 family protein 2 OS=Dictyostelium discoideum
GN=DDB_G0278529 PE=3 SV=1
Length = 193
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 56/111 (50%), Gaps = 1/111 (0%)
Query: 7 YGVPFGHFLNKFLDAIFKGRDNKSVAKKVLLEQLIFSPWINFLFMTYFGLVVEGKPWGSV 66
Y P H+ + LD + KG + KK+L++QL+F+P FMT + ++
Sbjct: 66 YSGPMLHYWYRSLDIMVKGEGRSVIIKKMLIDQLLFAPVAIGGFMTVTNFINNKGELKNL 125
Query: 67 MKKVRKDYPAVQFTSWKVWPTVTWVNFQYAPQQFRELFFSLVASCWAIFIN 117
++ + AV+ +W +WP +NF P R L+ S+++ W +F++
Sbjct: 126 ENFTKELFYAVKI-NWLIWPAAQIINFSLVPPNLRVLYSSIISIFWGMFLS 175
>sp|Q2KIY1|PXMP2_BOVIN Peroxisomal membrane protein 2 OS=Bos taurus GN=PXMP2 PE=2 SV=3
Length = 196
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 65/119 (54%), Gaps = 9/119 (7%)
Query: 2 LFDFGYGVPFGHFLNKFLDAIFKGRDNKSVAKKVLLEQLIFSPWINFLFMTYFGLV---V 58
++ F + P GHF ++ + K++LL++L+F+P F++ F LV +
Sbjct: 78 IYGFFFTGPLGHFFYLLMERWIPSEVPLAGIKRLLLDRLLFAP----AFLSLFFLVMNFL 133
Query: 59 EGKPWGSVMKKVRKDY-PAVQFTSWKVWPTVTWVNFQYAPQQFRELFFSLVASCWAIFI 116
EG+ + K++ + PA++ +W+VW V ++N Y P QFR LF +LVA W ++
Sbjct: 134 EGQDTAAFAAKMKSGFWPALRM-NWRVWTPVQFININYIPVQFRVLFANLVALFWYAYL 191
>sp|Q08743|YO292_YEAST Vacuolar membrane protein YOR292C OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=YOR292C PE=1 SV=1
Length = 309
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 52/92 (56%)
Query: 31 VAKKVLLEQLIFSPWINFLFMTYFGLVVEGKPWGSVMKKVRKDYPAVQFTSWKVWPTVTW 90
V ++VL +QL++SP + F + V+EG ++ KK+++ Y + ++ VWP V +
Sbjct: 217 VFERVLSDQLLYSPISLYCFFMFSNYVMEGGDKDTLGKKIQRLYISTLGCNYLVWPMVQF 276
Query: 91 VNFQYAPQQFRELFFSLVASCWAIFINLKAES 122
+NF P+ F+ F S V W F++++ S
Sbjct: 277 INFLIMPRDFQAPFSSSVGVVWNCFLSMRNAS 308
>sp|Q567V2|M17L2_HUMAN Mpv17-like protein 2 OS=Homo sapiens GN=MPV17L2 PE=1 SV=2
Length = 206
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 56/111 (50%), Gaps = 4/111 (3%)
Query: 10 PFGHFLNKFLDAIFKG---RDNKSVAKKVLLEQLIFSPWINFLFMTYFGLVVEGKPWGSV 66
PF H+ LD +F R +V KKVL++QL+ SP + + G +EG+ G
Sbjct: 74 PFLHYWYLSLDRLFPASGLRGFPNVLKKVLVDQLVASPLLGVWYFLGLG-CLEGQTVGES 132
Query: 67 MKKVRKDYPAVQFTSWKVWPTVTWVNFQYAPQQFRELFFSLVASCWAIFIN 117
+++R+ + W VWP +VNF + P QFR + + + W +++
Sbjct: 133 CQELREKFWEFYKADWCVWPAAQFVNFLFVPPQFRVTYINGLTLGWDTYLS 183
>sp|P42925|PXMP2_MOUSE Peroxisomal membrane protein 2 OS=Mus musculus GN=Pxmp2 PE=2 SV=2
Length = 194
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 61/109 (55%), Gaps = 5/109 (4%)
Query: 10 PFGHFLNKFLDAIFKGRDNKSVAKKVLLEQLIFSPWINFLFMTYFGL-VVEGKPWGSVMK 68
P H+L F++ + K++LL++L F+P FL + +F + ++EGK +
Sbjct: 84 PLSHYLYLFMEYSVPPEVPWASVKRLLLDRLFFAP--TFLLLFFFVMNLLEGKNVSVFVA 141
Query: 69 KVRKDY-PAVQFTSWKVWPTVTWVNFQYAPQQFRELFFSLVASCWAIFI 116
K+R + PA+Q +W++W + ++N Y P QFR LF ++ A W ++
Sbjct: 142 KMRSGFWPALQM-NWRMWTPLQFININYVPLQFRVLFANMAALFWYAYL 189
>sp|Q07066|PXMP2_RAT Peroxisomal membrane protein 2 OS=Rattus norvegicus GN=Pxmp2 PE=1
SV=2
Length = 194
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 61/109 (55%), Gaps = 5/109 (4%)
Query: 10 PFGHFLNKFLDAIFKGRDNKSVAKKVLLEQLIFSPWINFLFMTYFGL-VVEGKPWGSVMK 68
P H+L F++ + K++LL++L F+P FL + +F + ++EGK +
Sbjct: 84 PLSHYLYLFMEYWVPPEVPWARVKRLLLDRLFFAP--TFLLLFFFVMNLLEGKNISVFVA 141
Query: 69 KVRKDY-PAVQFTSWKVWPTVTWVNFQYAPQQFRELFFSLVASCWAIFI 116
K+R + PA+Q +W++W + ++N Y P QFR LF ++ A W ++
Sbjct: 142 KMRSGFWPALQ-MNWRMWTPLQFININYVPLQFRVLFANMAALFWYAYL 189
>sp|Q5BK62|MPV17_RAT Protein Mpv17 OS=Rattus norvegicus GN=Mpv17 PE=2 SV=1
Length = 176
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 49/106 (46%), Gaps = 1/106 (0%)
Query: 17 KFLDAIFKGRDNKSVAKKVLLEQLIFSPWINFLFMTYFGLVVEGKPWGSVMKKVRKDYPA 76
+ LD + G + KK+LL+Q F+P F+ G V+ G K+++DYP
Sbjct: 71 RVLDHLIPGTTKVNALKKMLLDQGGFAPCFLGCFLPLVG-VLNGMSAQDNWAKLKRDYPD 129
Query: 77 VQFTSWKVWPTVTWVNFQYAPQQFRELFFSLVASCWAIFINLKAES 122
T++ +WP V NF P +R VA W +++ KA
Sbjct: 130 ALITNYYLWPAVQLANFYLVPLHYRLAVVQCVAVVWNSYLSWKAHQ 175
>sp|P19258|MPV17_MOUSE Protein Mpv17 OS=Mus musculus GN=Mpv17 PE=2 SV=1
Length = 176
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 48/106 (45%), Gaps = 1/106 (0%)
Query: 17 KFLDAIFKGRDNKSVAKKVLLEQLIFSPWINFLFMTYFGLVVEGKPWGSVMKKVRKDYPA 76
K LD + G KK+LL+Q F+P F+ G ++ G K+++DYP
Sbjct: 71 KVLDHLIPGTTKVHALKKMLLDQGGFAPCFLGCFLPLVG-ILNGMSAQDNWAKLKRDYPD 129
Query: 77 VQFTSWKVWPTVTWVNFQYAPQQFRELFFSLVASCWAIFINLKAES 122
T++ +WP V NF P +R VA W +++ KA
Sbjct: 130 ALITNYYLWPAVQLANFYLVPLHYRLAVVQCVAIVWNSYLSWKAHQ 175
>sp|Q6DIY8|M17L2_XENTR Mpv17-like protein 2 OS=Xenopus tropicalis GN=mpv17l2 PE=2 SV=1
Length = 222
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 53/108 (49%), Gaps = 1/108 (0%)
Query: 10 PFGHFLNKFLDAIFKGRDNKSVAKKVLLEQLIFSPWINFLFMTYFGLVVEGKPWGSVMKK 69
P HF +LD F GR V +KVL++QL+ SP + + G +EG+ ++
Sbjct: 74 PLMHFWYSWLDRSFPGRGITVVMRKVLIDQLVASPVLGLWYFLGMG-SMEGQKLEKSWQE 132
Query: 70 VRKDYPAVQFTSWKVWPTVTWVNFQYAPQQFRELFFSLVASCWAIFIN 117
R+ + W VWP +NF + ++R ++ +++ W +++
Sbjct: 133 FREKFWEFYKADWTVWPAAQMINFYFLSPKYRVIYINVITVGWDTYLS 180
>sp|Q60SZ2|MPV17_CAEBR Mpv17-like protein (Fragment) OS=Caenorhabditis briggsae
GN=CBG20693 PE=3 SV=2
Length = 181
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 59/110 (53%), Gaps = 1/110 (0%)
Query: 17 KFLDAIFKGRDNKSVAKKVLLEQLIFSPWINFLFMTYFGLVVEGKPWGSVMKKVRKDYPA 76
+ L+ + + V ++ ++Q +FSP+ N + + L+ EG + + K++ D+
Sbjct: 68 RVLERVRHSNRHAQVFSRMSIDQFMFSPFFNAIILVNLRLL-EGFSFSKSVDKMKNDWYD 126
Query: 77 VQFTSWKVWPTVTWVNFQYAPQQFRELFFSLVASCWAIFINLKAESAAIK 126
V +S ++WP V +NF + P +R + +VA W +++ K ++ A++
Sbjct: 127 VYTSSLRLWPAVQLINFYFVPLNYRVILIQVVAFFWNSWLSFKTQTPALE 176
>sp|Q7SCY7|SYM1_NEUCR Protein sym-1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A
/ CBS 708.71 / DSM 1257 / FGSC 987) GN=sym-1 PE=3 SV=2
Length = 172
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 55/105 (52%), Gaps = 6/105 (5%)
Query: 13 HFLNKFLDAIFKGRDNKSVAKKVLLEQLIFSPWINFLFMTYFGLVVEGKPWGSVMKKVRK 72
FL K + G NK++ +V +Q +F+P +F+ V+EG V +K++K
Sbjct: 69 RFLQK--RVVVPGSTNKTILARVAADQGLFAPTFIGIFLGSMA-VLEGT---DVKEKLQK 122
Query: 73 DYPAVQFTSWKVWPTVTWVNFQYAPQQFRELFFSLVASCWAIFIN 117
+Y T+W VWP V VNF+ P R LF ++++ W +++
Sbjct: 123 NYWEALSTNWMVWPFVQMVNFKVVPLDHRVLFVNVISIGWNCYLS 167
>sp|Q4WDZ0|SYM1_ASPFU Protein sym1 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293
/ CBS 101355 / FGSC A1100) GN=sym1 PE=3 SV=1
Length = 196
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 55/93 (59%), Gaps = 6/93 (6%)
Query: 28 NKSVAKKVLLEQLIFSPWINFLFMTYFGLVVEGKPWGSVMKKVRKDY-PAVQFTSWKVWP 86
++V +V +QL+F+P + +F++ V+EG GS+ +K+ + Y PA++ +W VWP
Sbjct: 97 QRTVVGRVAADQLLFAPTMIGVFLSSMS-VLEG---GSLSEKLERSYWPALK-ANWTVWP 151
Query: 87 TVTWVNFQYAPQQFRELFFSLVASCWAIFINLK 119
+ VNF P QFR L +++ W F++L
Sbjct: 152 FLQLVNFALVPLQFRVLTVNVLNIGWNCFLSLS 184
>sp|P39210|MPV17_HUMAN Protein Mpv17 OS=Homo sapiens GN=MPV17 PE=1 SV=1
Length = 176
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 46/105 (43%), Gaps = 1/105 (0%)
Query: 17 KFLDAIFKGRDNKSVAKKVLLEQLIFSPWINFLFMTYFGLVVEGKPWGSVMKKVRKDYPA 76
K LD G KK+LL+Q F+P F+ G + G K+++DYP
Sbjct: 71 KVLDRFIPGTTKVDALKKMLLDQGGFAPCFLGCFLPLVG-ALNGLSAQDNWAKLQRDYPD 129
Query: 77 VQFTSWKVWPTVTWVNFQYAPQQFRELFFSLVASCWAIFINLKAE 121
T++ +WP V NF P +R VA W +++ KA
Sbjct: 130 ALITNYYLWPAVQLANFYLVPLHYRLAVVQCVAVIWNSYLSWKAH 174
>sp|Q66GV0|MPV17_XENLA Protein Mpv17 OS=Xenopus laevis GN=mpv17 PE=2 SV=2
Length = 177
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 49/107 (45%), Gaps = 1/107 (0%)
Query: 17 KFLDAIFKGRDNKSVAKKVLLEQLIFSPWINFLFMTYFGLVVEGKPWGSVMKKVRKDYPA 76
K LD I G KK+LL+Q+ F+P F++ + G + K+++DY
Sbjct: 72 KILDRIIPGSGKPVALKKMLLDQVAFAPCFLGCFLS-IASALNGLSGEQIWGKLKRDYKD 130
Query: 77 VQFTSWKVWPTVTWVNFQYAPQQFRELFFSLVASCWAIFINLKAESA 123
T++ +WP V NF + P R VA W +++ KA +
Sbjct: 131 ALITNYYIWPAVQVANFYFIPLYHRLAVVQFVAIIWNSYLSWKANKS 177
>sp|A5D787|M17L2_BOVIN Mpv17-like protein 2 OS=Bos taurus GN=MPV17L2 PE=2 SV=1
Length = 218
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 53/111 (47%), Gaps = 4/111 (3%)
Query: 10 PFGHFLNKFLDAIFKGRD---NKSVAKKVLLEQLIFSPWINFLFMTYFGLVVEGKPWGSV 66
PF H+ +LD +F +V KKVL++QL+ SP + + G +EG+
Sbjct: 74 PFLHYWYLWLDRLFPASGFPGLPNVLKKVLIDQLVASPMLGVWYFLGLG-CLEGQTLDKS 132
Query: 67 MKKVRKDYPAVQFTSWKVWPTVTWVNFQYAPQQFRELFFSLVASCWAIFIN 117
+++R + W VWP VNF + P QFR + + + W +++
Sbjct: 133 CQELRDKFWEFYKADWCVWPAAQLVNFLFVPPQFRVTYINGLTLGWDTYLS 183
>sp|Q2KIN6|MPV17_BOVIN Protein Mpv17 OS=Bos taurus GN=MPV17 PE=2 SV=1
Length = 176
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 47/105 (44%), Gaps = 1/105 (0%)
Query: 17 KFLDAIFKGRDNKSVAKKVLLEQLIFSPWINFLFMTYFGLVVEGKPWGSVMKKVRKDYPA 76
+ LD + G KK+LL+Q F+P F+ G + G K+++D+P
Sbjct: 71 RVLDRLIPGTTKVDALKKMLLDQGGFAPCFLGCFLPLVG-TLNGLSAQDNWAKLQRDFPD 129
Query: 77 VQFTSWKVWPTVTWVNFQYAPQQFRELFFSLVASCWAIFINLKAE 121
T++ +WP V NF P +R VA W +++ KA
Sbjct: 130 ALITNYYLWPAVQLANFYLVPLHYRLAVVQCVAVIWNSYLSWKAH 174
>sp|Q5TZ51|MPV17_DANRE Protein Mpv17 OS=Danio rerio GN=mpv17 PE=2 SV=1
Length = 177
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 52/109 (47%), Gaps = 9/109 (8%)
Query: 17 KFLDAIFKGRDNKSVAKKVLLEQLIFSPWINFLFM----TYFGLVVEGKPWGSVMKKVRK 72
K LD + G + KK+L++Q+ F+P F+ T GL VE + K+++
Sbjct: 72 KVLDKLVTGGTKSAALKKMLVDQVGFAPCFLGAFLGITGTLNGLTVEEN-----VAKLQR 126
Query: 73 DYPAVQFTSWKVWPTVTWVNFQYAPQQFRELFFSLVASCWAIFINLKAE 121
DY +++ +WP V NF + P R +VA W +++ KA
Sbjct: 127 DYTDALISNYYLWPPVQIANFYFIPLHHRLAVVQIVAVVWNSYLSWKAN 175
>sp|Q54ZX5|PX24A_DICDI PXMP2/4 family protein 1 OS=Dictyostelium discoideum
GN=DDB_G0277335 PE=3 SV=1
Length = 202
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 57/120 (47%), Gaps = 2/120 (1%)
Query: 9 VPFGHFLNKFLDAIFKGRDNKSVAKKVLLEQLIFSPWINFLFMTYFGLVVEGKPWGSVM- 67
VP HF KFLD F KV+++QL F P++ MT L +G + +
Sbjct: 65 VPQIHFWFKFLDKTFTKPGWAGAIPKVVVDQLTFGPYLFVCNMTSVQLFHQGFNFDTHQW 124
Query: 68 -KKVRKDYPAVQFTSWKVWPTVTWVNFQYAPQQFRELFFSLVASCWAIFINLKAESAAIK 126
K++KD+ V +W +WP + F++ +R L +LV+ W ++ + + +K
Sbjct: 125 KDKMKKDFFPVLQKAWMIWPLTNCILFRFVHPDYRILISNLVSVGWNCILSTVSNKSFLK 184
>sp|O14142|SYM1_SCHPO Protein sym1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=sym1 PE=3 SV=1
Length = 206
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 62/123 (50%), Gaps = 7/123 (5%)
Query: 5 FGYGV-PFGHFLNKFLDAIF---KGRDNKSVAKKVLLEQLIFSPWINFLFMTYFGLVVEG 60
FG+ + PF + L A F KG N V K+VLL+Q +F+P+ F ++ L EG
Sbjct: 75 FGFAISPFQFRWLRLLSAKFPIEKGAIN--VVKRVLLDQAVFAPFGTAFFFSWMTLA-EG 131
Query: 61 KPWGSVMKKVRKDYPAVQFTSWKVWPTVTWVNFQYAPQQFRELFFSLVASCWAIFINLKA 120
K + K++ + ++ VWP VNF P Q++ F VA W IF++LK
Sbjct: 132 KGFRGAYDKLQAVFWPTLKANYMVWPFFQTVNFWLMPLQYQMPFACTVAIFWNIFLSLKN 191
Query: 121 ESA 123
S+
Sbjct: 192 ASS 194
>sp|Q8VIK2|M17L2_MOUSE Mpv17-like protein 2 OS=Mus musculus GN=Mpv17l2 PE=1 SV=1
Length = 200
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 51/111 (45%), Gaps = 4/111 (3%)
Query: 10 PFGHFLNKFLDAIFKG---RDNKSVAKKVLLEQLIFSPWINFLFMTYFGLVVEGKPWGSV 66
PF HF +LD + R SV KKVL++Q + SP + + G +EG+
Sbjct: 74 PFLHFWYLWLDRLLPASGLRSLPSVMKKVLVDQTVASPILGVWYFLGLG-SLEGQTLEES 132
Query: 67 MKKVRKDYPAVQFTSWKVWPTVTWVNFQYAPQQFRELFFSLVASCWAIFIN 117
+++R + W VWP VNF + P FR + + + W +++
Sbjct: 133 CQELRAKFWDFYKADWCVWPAAQLVNFLFIPSHFRVTYINGLTLGWDTYLS 183
>sp|Q4IPX8|SYM1_GIBZE Protein SYM1 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC
9075 / NRRL 31084) GN=SYM1 PE=3 SV=1
Length = 175
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 57/103 (55%), Gaps = 8/103 (7%)
Query: 18 FLDAIFKGRDNK--SVAKKVLLEQLIFSPWINFLFMTYFGLVVEGKPWGSVMKKVRKDY- 74
FL R+NK V +V +QL F+P + +F++ +EGK SV +++ K +
Sbjct: 73 FLARRVNVRNNKKAEVLARVACDQLGFAPVMIGVFLSSMA-TMEGK---SVKERIDKTWW 128
Query: 75 PAVQFTSWKVWPTVTWVNFQYAPQQFRELFFSLVASCWAIFIN 117
PA++ +W VWP V +NF P Q+R F +++A W +++
Sbjct: 129 PALK-ANWMVWPAVQVINFSLIPLQYRLFFANIIAIGWNSYLS 170
>sp|Q06563|SYM1_YEAST Protein SYM1 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=SYM1 PE=1 SV=1
Length = 197
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
Query: 34 KVLLEQLIFSPWINFLFMTYFGLVVEGKPWGSVMKKVRKDYPAVQFTSWKVWPTVTWVNF 93
+V ++QL F+P + T ++EG+ + K+++ + T+W VWP +NF
Sbjct: 94 RVAVDQLAFAPLGLPFYFTCMS-IMEGRSFDVAKLKIKEQWWPTLLTNWAVWPLFQAINF 152
Query: 94 QYAPQQFRELFFSLVASCWAIFINLKAESAAIKKD 128
P Q R L ++VA W +++ K S ++KD
Sbjct: 153 SVVPLQHRLLAVNVVAIFWNTYLSYK-NSKVMEKD 186
>sp|Q4P9K6|SYM1_USTMA Protein SYM1 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=SYM1
PE=3 SV=1
Length = 199
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 50/95 (52%), Gaps = 1/95 (1%)
Query: 30 SVAKKVLLEQLIFSPWINFLFMTYFGLVVEGKPWGSVMKKVRKDYPAVQFTSWKVWPTVT 89
++A KV L+Q I SP LF ++ G P + K + +P ++ T+W +W V
Sbjct: 83 NIATKVALDQAIASPAFVALFFGATTIMEGGSPDQAKNKIIHNWWPTLK-TAWGLWIPVQ 141
Query: 90 WVNFQYAPQQFRELFFSLVASCWAIFINLKAESAA 124
+N P R LF ++V+ W F+++K+ +A+
Sbjct: 142 TLNMALVPPSQRLLFVNVVSIFWNTFLSIKSAAAS 176
>sp|Q6CIY7|SYM1_KLULA Protein SYM1 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 /
DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=SYM1 PE=3
SV=1
Length = 195
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 5/97 (5%)
Query: 25 GRDNKSVAKKVLLEQLIFSPWINFLFMTYFGL--VVEGKPWGSVMKKVRKDYPAVQFTSW 82
G+ + A +V +QL+F+P Y+G+ ++EGK KK+ ++ T+W
Sbjct: 83 GKHWTNTAARVGCDQLLFAP---VGIPMYYGVMSILEGKSLVDAKKKIEDNWWPTLVTNW 139
Query: 83 KVWPTVTWVNFQYAPQQFRELFFSLVASCWAIFINLK 119
VWP +NF P R ++++ W F++ K
Sbjct: 140 YVWPAFQLINFSLVPVHHRLFSVNIISIFWNAFLSFK 176
>sp|Q9V492|MPV17_DROME Mpv17-like protein OS=Drosophila melanogaster GN=CG11077 PE=2 SV=1
Length = 168
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 18/89 (20%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Query: 34 KVLLEQLIFSPWINFLFMTYFGLVVEGKPWGSVMKKVRKDYPAVQFTSWKVWPTVTWVNF 93
K+L++Q +F+P + M++ + G+P + +++ Y ++ ++ +WP +NF
Sbjct: 81 KMLVDQTLFAPPFT-MAMSFLVPLSNGEPIDRIRQRILDSYLSILVRNYMLWPAAQMLNF 139
Query: 94 QYAPQQFRELFFSLVASCWAIFINLKAES 122
++ P ++ L+ +A W ++++ S
Sbjct: 140 RFVPLGYQVLYAQFIALVWNCYLSMILNS 168
>sp|Q10244|YD1E_SCHPO Uncharacterized protein C4G9.14 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC4G9.14 PE=3 SV=1
Length = 221
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 45/93 (48%), Gaps = 1/93 (1%)
Query: 30 SVAKKVLLEQLIFSPWINFLFMTYFGLVVEGKPWGSVMKKVRKDYPAVQFTSWKVWPTVT 89
++ +V L+Q IF+P F + G + E K + + RK Y ++ +WP V
Sbjct: 125 AIVLRVALDQFIFAPLGIVFFFLFMG-ITECKSYERLKSYFRKHYWPTLKANYILWPAVQ 183
Query: 90 WVNFQYAPQQFRELFFSLVASCWAIFINLKAES 122
NF + P + +F + V+ W +++LK S
Sbjct: 184 LFNFTFVPLVLQVIFANAVSMVWTAYLSLKNSS 216
>sp|Q6FXJ3|SYM1_CANGA Protein SYM1 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM
3761 / NBRC 0622 / NRRL Y-65) GN=SYM1 PE=3 SV=1
Length = 210
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Query: 34 KVLLEQLIFSPWINFLFMTYFGL--VVEGKPWGSVMKKVRKDYPAVQFTSWKVWPTVTWV 91
+V ++QL F+P + F YFG ++EG G+ +K++ + T+W VWP V
Sbjct: 106 RVCVDQLGFAP-LGLPF--YFGCMSLLEGHGLGAAREKIKLQWWDTLKTNWCVWPLFQMV 162
Query: 92 NFQYAPQQFRELFFSLVASCWAIFIN 117
NF P Q R L ++VA W F++
Sbjct: 163 NFSLVPLQHRLLAANVVAIFWNTFLS 188
>sp|Q754F0|SYM1_ASHGO Protein SYM1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 /
FGSC 9923 / NRRL Y-1056) GN=SYM1 PE=3 SV=1
Length = 182
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 53/112 (47%), Gaps = 5/112 (4%)
Query: 17 KFLDAIFKGRDNKS----VAKKVLLEQLIFSPWINFLFMTYFGLVVEGKPWGSVMKKVRK 72
+FL + GR ++ V +V +QLIF+P L+ T L+ EG V ++ +
Sbjct: 71 RFLSTVRLGRLPQAHWANVLARVACDQLIFAPIGVPLYYTAMALM-EGGSLEDVRIRLSE 129
Query: 73 DYPAVQFTSWKVWPTVTWVNFQYAPQQFRELFFSLVASCWAIFINLKAESAA 124
+ + +W VWP NF P Q R L ++++ W +++ +A+
Sbjct: 130 KWWSTLLANWIVWPAFQLCNFSLVPVQHRLLTVNVLSIFWNTYLSYSNSTAS 181
>sp|Q6CAW5|SYM1_YARLI Protein SYM1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150)
GN=SYM1 PE=3 SV=1
Length = 202
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 41/94 (43%), Gaps = 1/94 (1%)
Query: 23 FKGRDNKSVAKKVLLEQLIFSPWINFLFMTYFGLVVEGKPWGSVMKKVRKDYPAVQFTSW 82
F G+ V KV ++Q +F+P + + GL+ EGK ++ + ++ Y W
Sbjct: 65 FLGQQQLPVIAKVAIDQAVFAPSSIGYYFSVMGLL-EGKSPDTIWQSLKNQYWDTLKCGW 123
Query: 83 KVWPTVTWVNFQYAPQQFRELFFSLVASCWAIFI 116
+WP NF P FR L + W F+
Sbjct: 124 MIWPAFQLFNFGIVPPNFRVLASNCCGLVWNTFL 157
>sp|Q9NR77|PXMP2_HUMAN Peroxisomal membrane protein 2 OS=Homo sapiens GN=PXMP2 PE=1 SV=3
Length = 195
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 60/116 (51%), Gaps = 3/116 (2%)
Query: 2 LFDFGYGVPFGHFLNKFLDAIFKGRDNKSVAKKVLLEQLIFSPWINFLFMTYFGLVVEGK 61
++ F + P HF F++ + +++LL++L+F+P LF + EGK
Sbjct: 77 VYGFFFTGPLSHFFYFFMEHWIPPEVPLAGLRRLLLDRLVFAPAFLMLFFLIMNFL-EGK 135
Query: 62 PWGSVMKKVRKDY-PAVQFTSWKVWPTVTWVNFQYAPQQFRELFFSLVASCWAIFI 116
+ K+R + PA++ +W+VW + ++N Y P +FR LF +L A W ++
Sbjct: 136 DASAFAAKMRGGFWPALR-MNWRVWTPLQFININYVPLKFRVLFANLAALFWYAYL 190
>sp|Q7YWV6|MPV17_CAEEL Mpv17-like protein OS=Caenorhabditis elegans GN=T18D3.9 PE=3 SV=1
Length = 181
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Query: 27 DNKSV--AKKVLLEQLIFSPWINFLFMTYFGLVVEGKPWGSVMKKVRKDYPAVQFTSWKV 84
+NKS+ KK+ ++QL FSP N + L+ S +++D+ + TS KV
Sbjct: 76 NNKSLLLVKKLCIDQLCFSPCFNAAILFNLRLLQHQSAEKS-WDLLKEDWFNIYATSLKV 134
Query: 85 WPTVTWVNFQYAPQQFRELFFSLVASCWAIFIN 117
WP V VN + P +R + +VA W +++
Sbjct: 135 WPFVQVVNLCFVPLNYRVILNQVVAFFWNCYLS 167
>sp|Q59Q43|SYM1_CANAL Protein SYM1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876)
GN=SYM1 PE=3 SV=1
Length = 195
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 50/95 (52%), Gaps = 2/95 (2%)
Query: 30 SVAKKVLLEQLIFSPWINF-LFMTYFGLVVEGKPW-GSVMKKVRKDYPAVQFTSWKVWPT 87
S +V+++QL+F+P+I L+ + ++ +P+ +++ K + ++W VWP
Sbjct: 99 STLLRVMVDQLVFAPFIGIPLYYSSMTILENRQPFLDNIIDKFNTSWWITLKSNWLVWPL 158
Query: 88 VTWVNFQYAPQQFRELFFSLVASCWAIFINLKAES 122
+ NF P QFR L ++++ W +++ S
Sbjct: 159 FQFFNFYLLPVQFRLLAVNIISIGWNTYLSYVMHS 193
>sp|Q2TXA2|SYM1_ASPOR Protein sym1 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40)
GN=sym1 PE=3 SV=1
Length = 173
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
Query: 30 SVAKKVLLEQLIFSPWINFLFMTYFGLVVEGKPWGSVMKKVRKDYPAVQFTSWKVWPTVT 89
++ +V +Q +F+P F+T ++ P ++K R + + +WP V
Sbjct: 83 TIVARVAADQCLFTPTHLTCFLTSMAIMEGSDP----IEKWRNSFLPSYKANLTIWPLVQ 138
Query: 90 WVNFQYAPQQFRELFFSLVASCWAIFINL 118
VNF P ++R L +LV+ W +++
Sbjct: 139 GVNFSIVPLEYRVLVVNLVSLGWNCLLSM 167
>sp|Q6BMY0|SYM1_DEBHA Protein SYM1 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767
/ JCM 1990 / NBRC 0083 / IGC 2968) GN=SYM1 PE=3 SV=1
Length = 206
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
Query: 34 KVLLEQLIFSPWINFLFMTYFGLVVE--GKPWGSVMKKVRKDYPAVQFTSWKVWPTVTWV 91
KV ++QL+F+P+I V+E P +K+ + T+W VWPT
Sbjct: 97 KVGVDQLVFAPFIGIPLYYSVMSVLEFHDNPLQVAREKLHAHWFNTLKTNWVVWPTFQLF 156
Query: 92 NFQYAPQQFRELFFSLVASCWAIFIN 117
NF P QFR L ++ + W +++
Sbjct: 157 NFALIPVQFRLLVVNIFSIGWNCYLS 182
>sp|Q99MS3|MP17L_MOUSE Mpv17-like protein OS=Mus musculus GN=Mpv17l PE=1 SV=2
Length = 194
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 47/108 (43%), Gaps = 5/108 (4%)
Query: 17 KFLDAIFKGRDNKSVAKKVLLEQLIFSPWINFLFMTYFGL-VVEGKPWGSVMKKVRKDYP 75
+ L+ GR ++V KVL +Q + P F Y G+ V++GK + +++ +
Sbjct: 68 RLLERALPGRAPRTVLAKVLCDQTVGGPIALSAF--YVGMSVLQGK--DDIFLDLKQKFW 123
Query: 76 AVQFTSWKVWPTVTWVNFQYAPQQFRELFFSLVASCWAIFINLKAESA 123
+ WP V NF P +R + L A WA F+ +S
Sbjct: 124 NTYKSGLMYWPFVQLTNFSLVPVHWRTAYTGLCAFLWATFLCFSQQSG 171
>sp|Q2QL34|MP17L_HUMAN Mpv17-like protein OS=Homo sapiens GN=MPV17L PE=1 SV=1
Length = 196
Score = 36.6 bits (83), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 48/108 (44%), Gaps = 5/108 (4%)
Query: 17 KFLDAIFKGRDNKSVAKKVLLEQLIFSPWINFLFMTYFGL-VVEGKPWGSVMKKVRKDYP 75
+ L+ GR ++ K+L +Q++ +P F Y G+ +++GK + +++ +
Sbjct: 68 RLLERALPGRAPHALLAKLLCDQVVGAPIAVSAF--YVGMSILQGKD--DIFLDLKQKFW 123
Query: 76 AVQFTSWKVWPTVTWVNFQYAPQQFRELFFSLVASCWAIFINLKAESA 123
+ WP V NF P Q+R + + WA FI +S
Sbjct: 124 NTYLSGLMYWPFVQLTNFSLVPVQWRTAYAGVCGFLWATFICFSQQSG 171
>sp|Q2KIK2|MP17L_BOVIN Mpv17-like protein OS=Bos taurus GN=MPV17L PE=2 SV=1
Length = 196
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 47/108 (43%), Gaps = 5/108 (4%)
Query: 17 KFLDAIFKGRDNKSVAKKVLLEQLIFSPWINFLFMTYFGL-VVEGKPWGSVMKKVRKDYP 75
L+ GR +++ KVL +Q + P ++ Y G+ +++GK + +R+ +
Sbjct: 68 NLLERALPGRAPRTILAKVLCDQALGGP--VYVSTFYAGMSILQGKD--DIFLDMRQKFW 123
Query: 76 AVQFTSWKVWPTVTWVNFQYAPQQFRELFFSLVASCWAIFINLKAESA 123
+ WP V +NF P ++R + L WA F+ +
Sbjct: 124 NTYKSGLMYWPFVQLINFSLIPIRWRTAYTGLCGFLWATFLCFSQQEG 171
>sp|Q68F62|MP17L_XENLA Mpv17-like protein OS=Xenopus laevis GN=mpv17l PE=2 SV=1
Length = 203
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 48/115 (41%), Gaps = 3/115 (2%)
Query: 2 LFDFGYGVPFGHFLNKFLDAIFKGRDNKSVAKKVLLEQLIFSPWINFLFMTYFGLVVEGK 61
L F + F F +F++ F G +V +KV +QL+ +P F T L ++G+
Sbjct: 52 LVGFCFHANFNFFWLRFIERTFPGSAPLNVIRKVACDQLMAAPITISAFYTGLSL-LDGE 110
Query: 62 PWGSVMKKVRKDYPAVQFTSWKVWPTVTWVNFQYAPQQFRELFFSLVASCWAIFI 116
V K +++ + T W +NF P R + + A W F+
Sbjct: 111 --RDVFKNLKEKFWPTYKTGVMCWTVFQTINFSVIPPFVRTAYIGVCAFLWTTFL 163
>sp|C5DD45|AIM6_LACTC Altered inheritance of mitochondria protein 6 OS=Lachancea
thermotolerans (strain ATCC 56472 / CBS 6340 / NRRL
Y-8284) GN=AIM6 PE=3 SV=1
Length = 429
Score = 32.3 bits (72), Expect = 0.82, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 33/75 (44%), Gaps = 7/75 (9%)
Query: 4 DFGYGVPFGH---FLNKFLDAIFKGRDNKSVAKKVLLEQLIFSPWINFLFMTYFGLVVEG 60
D YGV + LN ++D FK D S LL L P I+ ++TYF + E
Sbjct: 227 DHKYGVFYSSPETTLNLYID--FKSPD--STQTYALLMDLYLKPLIDMGYLTYFDMDEEK 282
Query: 61 KPWGSVMKKVRKDYP 75
W V + DYP
Sbjct: 283 VVWNPVTVILTGDYP 297
>sp|P87515|POLN_BFV Non-structural polyprotein OS=Barmah forest virus PE=2 SV=2
Length = 2410
Score = 31.2 bits (69), Expect = 2.0, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 4/47 (8%)
Query: 3 FDFGYGVPFGHFLNKFLDAIFKGRDNKSVAKKVLLEQLIFSPWINFL 49
F FG + G FL F++ I N +A +VL +QL SPW F+
Sbjct: 2221 FKFGAMMKSGMFLTLFVNTIL----NVVIACRVLEDQLAQSPWPAFI 2263
>sp|P28595|PYRG_AZOBR CTP synthase OS=Azospirillum brasilense GN=pyrG PE=3 SV=1
Length = 544
Score = 31.2 bits (69), Expect = 2.2, Method: Composition-based stats.
Identities = 13/26 (50%), Positives = 18/26 (69%), Gaps = 4/26 (15%)
Query: 51 MTYFGLVVEGKP----WGSVMKKVRK 72
+ YFGL EGKP W S++++VRK
Sbjct: 260 LAYFGLPTEGKPDLSRWTSIVERVRK 285
>sp|Q87I05|GCSP_VIBPA Glycine dehydrogenase [decarboxylating] OS=Vibrio parahaemolyticus
serotype O3:K6 (strain RIMD 2210633) GN=gcvP PE=3 SV=1
Length = 954
Score = 30.0 bits (66), Expect = 4.0, Method: Composition-based stats.
Identities = 26/102 (25%), Positives = 45/102 (44%), Gaps = 15/102 (14%)
Query: 15 LNKFLDAIFKGRDNKSVAK--KVLLEQLIFSPWINFLFMTYFGLVVEGKPWGSVMKKVRK 72
LN+F DA+ R+ + K + LE +P +N + + + + W +
Sbjct: 861 LNRFCDAMISIREEMTKVKNGEWPLEN---NPLVN---APHTQVDLSAEEWDRPYSRELG 914
Query: 73 DYPAVQFTSWKVWPTVTWVNFQYAPQQFRELFFSLVASCWAI 114
+P+ SWK WPTV V+ Y + +L+ SC +I
Sbjct: 915 CFPSKATKSWKYWPTVNRVDNVYGDR-------NLICSCPSI 949
>sp|Q54TM2|LMD2B_DICDI LMBR1 domain-containing protein 2 homolog B OS=Dictyostelium
discoideum GN=DDB_G0281669 PE=3 SV=1
Length = 790
Score = 30.0 bits (66), Expect = 4.7, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 22/37 (59%)
Query: 88 VTWVNFQYAPQQFRELFFSLVASCWAIFINLKAESAA 124
VT++ + QQ+R L+F + CW IF L++ S A
Sbjct: 114 VTYLPYGMITQQWRFLYFGSLILCWVIFPVLQSFSTA 150
>sp|Q1LPW1|NUOC_RALME NADH-quinone oxidoreductase subunit C OS=Ralstonia metallidurans
(strain CH34 / ATCC 43123 / DSM 2839) GN=nuoC PE=3 SV=1
Length = 199
Score = 29.6 bits (65), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Query: 45 WINFLFMTYFGLVVEGKPWGSVMKKVRKDYPAVQFTSWKVWPTVTWVNFQYAPQQFRELF 104
W ++G+V EG P ++++ DY V K +P +V +Y P+Q R ++
Sbjct: 118 WFEREAFDFYGIVFEGHP---DLRRILTDYGFVGHPFRKDFPVSGYVEMRYDPEQKRVIY 174
>sp|Q8DLB8|GLGB_THEEB 1,4-alpha-glucan branching enzyme GlgB OS=Thermosynechococcus
elongatus (strain BP-1) GN=glgB PE=3 SV=1
Length = 766
Score = 29.6 bits (65), Expect = 6.2, Method: Composition-based stats.
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 78 QFTSWKVWPTVTWVNFQYAPQQFRELFF 105
Q++ W VW + W QY P Q + FF
Sbjct: 600 QWSEWNVWSDLEWHLLQYEPHQQIKRFF 627
>sp|Q473U1|NUOC_CUPPJ NADH-quinone oxidoreductase subunit C OS=Cupriavidus pinatubonensis
(strain JMP134 / LMG 1197) GN=nuoC PE=3 SV=1
Length = 199
Score = 29.3 bits (64), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Query: 45 WINFLFMTYFGLVVEGKPWGSVMKKVRKDYPAVQFTSWKVWPTVTWVNFQYAPQQFRELF 104
W ++G+V EG P ++++ DY V K +P +V +Y P+Q R ++
Sbjct: 118 WFEREAFDFYGIVFEGHP---DLRRLLTDYGFVGHPFRKDFPVSGYVEMRYDPEQKRVIY 174
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.328 0.141 0.472
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,342,590
Number of Sequences: 539616
Number of extensions: 1759413
Number of successful extensions: 4222
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 4153
Number of HSP's gapped (non-prelim): 56
length of query: 128
length of database: 191,569,459
effective HSP length: 94
effective length of query: 34
effective length of database: 140,845,555
effective search space: 4788748870
effective search space used: 4788748870
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 55 (25.8 bits)