Query 033042
Match_columns 128
No_of_seqs 122 out of 922
Neff 7.7
Searched_HMMs 13730
Date Mon Mar 25 14:48:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033042.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/033042hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1khda1 a.46.2.1 (A:12-80) Ant 36.4 28 0.0021 18.4 5.0 52 16-69 3-57 (69)
2 d2elca1 a.46.2.1 (A:1-52) Anth 19.0 58 0.0043 16.2 4.5 47 18-66 3-52 (52)
3 d1h2vc1 a.118.1.14 (C:29-290) 18.1 1.3E+02 0.0093 20.0 5.6 71 28-99 36-115 (262)
4 d1ppjg_ f.23.13.1 (G:) Ubiquin 14.9 97 0.0071 17.0 4.0 35 20-54 23-60 (75)
5 d3ct6a1 c.54.1.2 (A:1-123) PTS 13.9 92 0.0067 18.5 3.5 32 41-73 88-119 (123)
6 d1fs1b1 a.157.1.1 (B:86-140) C 10.2 1.2E+02 0.0087 15.3 5.1 13 57-69 41-53 (55)
7 d1jqra_ d.218.1.2 (A:) DNA pol 10.0 35 0.0026 21.7 0.5 16 87-102 159-174 (174)
8 d1fpza_ c.45.1.1 (A:) Kinase a 9.6 1.4E+02 0.01 18.2 3.5 28 43-73 123-150 (176)
9 d2fnaa1 a.4.5.11 (A:284-356) H 9.3 1.5E+02 0.011 16.1 3.0 24 50-73 8-31 (73)
10 d1o17a1 a.46.2.1 (A:1-70) Anth 8.3 1.5E+02 0.011 15.1 5.7 51 17-69 5-58 (70)
No 1
>d1khda1 a.46.2.1 (A:12-80) Anthranilate phosphoribosyltransferase (TrpD) {Pectobacterium carotovorum [TaxId: 554]}
Probab=36.36 E-value=28 Score=18.44 Aligned_cols=52 Identities=10% Similarity=0.146 Sum_probs=35.9
Q ss_pred HHHHhhhcCCCChHHHHHHHHHHHHh---hhHHHHHHHHHHHHHHhcCCChhhHHHH
Q 033042 16 NKFLDAIFKGRDNKSVAKKVLLEQLI---FSPWINFLFMTYFGLVVEGKPWGSVMKK 69 (128)
Q Consensus 16 y~~L~~~~~~~~~~~~~~Kv~~Dq~v---~~P~~~~~f~~~~~~~l~g~s~~~~~~~ 69 (128)
-..++++..+.++..-=.+-++|++. .++.-.+.|+..+. .+|.|.+|+..-
T Consensus 3 ~~il~kl~~g~~Ls~ee~~~~~~~i~~g~~~d~qiaafL~al~--~kg~t~dEi~g~ 57 (69)
T d1khda1 3 QPILEKLFKSQSMTQEESHQLFAAIVRGELEDSQLAAALISMK--MRGERPEEIAGA 57 (69)
T ss_dssp HHHHHHHHTTCCCCHHHHHHHHHHHTTTCSCHHHHHHHHHHHH--HHCCCHHHHHHH
T ss_pred HHHHHHHHcCCCCCHHHHHHHHHHHHcCCCCHHHHHHHHHHHH--HhCCCHHHHHHH
Confidence 34677777776655555566666664 36677888887774 799998877653
No 2
>d2elca1 a.46.2.1 (A:1-52) Anthranilate phosphoribosyltransferase (TrpD) {Thermus thermophilus [TaxId: 274]}
Probab=18.99 E-value=58 Score=16.24 Aligned_cols=47 Identities=11% Similarity=0.102 Sum_probs=28.4
Q ss_pred HHhhhcCCCChHHHHHHHHHHHHh---hhHHHHHHHHHHHHHHhcCCChhhH
Q 033042 18 FLDAIFKGRDNKSVAKKVLLEQLI---FSPWINFLFMTYFGLVVEGKPWGSV 66 (128)
Q Consensus 18 ~L~~~~~~~~~~~~~~Kv~~Dq~v---~~P~~~~~f~~~~~~~l~g~s~~~~ 66 (128)
.|+++..+.++..-=.+-++++.. .+|.-++.|++.+. .+|.|.+++
T Consensus 3 ~l~kl~~g~~Lt~~ea~~~~~~im~G~~~~~qiaafL~al~--~KGeT~~Ei 52 (52)
T d2elca1 3 AVKKAILGEVLEEEEAYEVMRALMAGEVSPVRAAGLLVALS--LRGERPHEI 52 (52)
T ss_dssp HHHHHHTTCCCCHHHHHHHHHHHHTTCSCHHHHHHHHHHHH--HHCCCHHHH
T ss_pred HHHHHHcCCCCCHHHHHHHHHHHHcCCCCHHHHHHHHHHHH--HcCCCcccC
Confidence 355555555443333444444443 36778888887774 788887664
No 3
>d1h2vc1 a.118.1.14 (C:29-290) CBP80, 80KDa nuclear cap-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=18.07 E-value=1.3e+02 Score=19.98 Aligned_cols=71 Identities=14% Similarity=0.163 Sum_probs=47.3
Q ss_pred hHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCh---hhHHHHHHhhChHHHHhc-c-----eechHHHhhhheeecC
Q 033042 28 NKSVAKKVLLEQLIFSPWINFLFMTYFGLVVEGKPW---GSVMKKVRKDYPAVQFTS-W-----KVWPTVTWVNFQYAPQ 98 (128)
Q Consensus 28 ~~~~~~Kv~~Dq~v~~P~~~~~f~~~~~~~l~g~s~---~~~~~~~~~~~~~~~~~~-~-----~~Wp~~~~inf~~vP~ 98 (128)
.++.+.+.+++.....|..+..|-+..+ ++.-+.. +++.+++.+++-..+.++ | .+-=.+++.|+..++.
T Consensus 36 ~~~~il~~l~~~~~~~P~k~~~yA~Lv~-llN~~~~e~g~~~l~~~~~~f~~~l~~~~~~~~~~llrFla~L~n~~Vv~~ 114 (262)
T d1h2vc1 36 YKSKILRLLCTVARLLPEKLTIYTTLVG-LLNARNYNFGGEFVEAMIRQLKESLKANNYNEAVYLVRFLSDLVNCHVIAA 114 (262)
T ss_dssp HHHHHHHHHHHHHHHCGGGHHHHHHHHH-HHHTTCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTSBCH
T ss_pred HHHHHHHHHHHHHHhCcchHHHHHHHHH-HHccCcHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHccCCCCcH
Confidence 5777888889999889988888777777 7766653 255555556666555543 2 2235666777766665
Q ss_pred C
Q 033042 99 Q 99 (128)
Q Consensus 99 ~ 99 (128)
.
T Consensus 115 ~ 115 (262)
T d1h2vc1 115 P 115 (262)
T ss_dssp H
T ss_pred h
Confidence 3
No 4
>d1ppjg_ f.23.13.1 (G:) Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) {Cow (Bos taurus) [TaxId: 9913]}
Probab=14.93 E-value=97 Score=16.98 Aligned_cols=35 Identities=14% Similarity=0.206 Sum_probs=24.1
Q ss_pred hhhcCC---CChHHHHHHHHHHHHhhhHHHHHHHHHHH
Q 033042 20 DAIFKG---RDNKSVAKKVLLEQLIFSPWINFLFMTYF 54 (128)
Q Consensus 20 ~~~~~~---~~~~~~~~Kv~~Dq~v~~P~~~~~f~~~~ 54 (128)
+|-+++ ++..++++++--+-+...|.++..|+++.
T Consensus 23 Qrafag~~~~gi~N~~RR~~~~~l~v~PPfi~~Y~iy~ 60 (75)
T d1ppjg_ 23 QRAFPHYFSKGIPNVLRRTRACILRVAPPFVAFYLVYT 60 (75)
T ss_dssp BCSSTTTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhcchHHhcccHHHHHhHHhceEEcCHHHHHHHHHH
Confidence 345555 56788888888666667787777776554
No 5
>d3ct6a1 c.54.1.2 (A:1-123) PTS-dependent dihydroxyacetone kinase, phosphotransferase subunit DhaM {Lactococcus lactis [TaxId: 1358]}
Probab=13.94 E-value=92 Score=18.46 Aligned_cols=32 Identities=13% Similarity=0.165 Sum_probs=25.5
Q ss_pred hhhHHHHHHHHHHHHHHhcCCChhhHHHHHHhh
Q 033042 41 IFSPWINFLFMTYFGLVVEGKPWGSVMKKVRKD 73 (128)
Q Consensus 41 v~~P~~~~~f~~~~~~~l~g~s~~~~~~~~~~~ 73 (128)
+-.|+.-..+-.... ...|.+.+++.+++++-
T Consensus 88 i~~p~tegal~Aa~~-a~~g~~leeI~~~~~~~ 119 (123)
T d3ct6a1 88 FNVPLIEGAYTASAL-LEAGATFEAIKEQLEKM 119 (123)
T ss_dssp CCSCHHHHHHHHHHH-HHTTCCHHHHHHHHGGG
T ss_pred EcCchHHHHHHHHHH-HhCCCCHHHHHHHHHHh
Confidence 446776677777777 88999999999998764
No 6
>d1fs1b1 a.157.1.1 (B:86-140) Cyclin A/CDK2-associated p45, Skp1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=10.24 E-value=1.2e+02 Score=15.32 Aligned_cols=13 Identities=23% Similarity=0.383 Sum_probs=10.3
Q ss_pred HhcCCChhhHHHH
Q 033042 57 VVEGKPWGSVMKK 69 (128)
Q Consensus 57 ~l~g~s~~~~~~~ 69 (128)
.++|+|++|+++.
T Consensus 41 ~ikgKt~eeiR~~ 53 (55)
T d1fs1b1 41 MIKGKTPEEIRKT 53 (55)
T ss_dssp HHTTCCHHHHHHH
T ss_pred HHcCCCHHHHHHH
Confidence 6789998888764
No 7
>d1jqra_ d.218.1.2 (A:) DNA polymerase X {African swine fever virus [TaxId: 10497]}
Probab=10.03 E-value=35 Score=21.68 Aligned_cols=16 Identities=19% Similarity=0.237 Sum_probs=13.0
Q ss_pred HHHhhhheeecCCchh
Q 033042 87 TVTWVNFQYAPQQFRE 102 (128)
Q Consensus 87 ~~~~inf~~vP~~~Rv 102 (128)
..+.++.-|+||+.|+
T Consensus 159 If~~LGl~yipPe~R~ 174 (174)
T d1jqra_ 159 LIKELGFTYRIPKKRL 174 (174)
T ss_dssp HHHHHTCCCCCGGGCC
T ss_pred HHHHcCCCCCChHhcC
Confidence 4677888899999885
No 8
>d1fpza_ c.45.1.1 (A:) Kinase associated phosphatase (kap) {Human (Homo sapiens) [TaxId: 9606]}
Probab=9.64 E-value=1.4e+02 Score=18.23 Aligned_cols=28 Identities=11% Similarity=0.121 Sum_probs=18.0
Q ss_pred hHHHHHHHHHHHHHHhcCCChhhHHHHHHhh
Q 033042 43 SPWINFLFMTYFGLVVEGKPWGSVMKKVRKD 73 (128)
Q Consensus 43 ~P~~~~~f~~~~~~~l~g~s~~~~~~~~~~~ 73 (128)
++.+.++++.. ...|.+.+++.+.+|+.
T Consensus 123 tg~v~~~~Li~---~~~~~~~~~Ai~~vr~~ 150 (176)
T d1fpza_ 123 SCLVAACLLLY---LSDTISPEQAIDSLRDL 150 (176)
T ss_dssp HHHHHHHHHHH---HCSSCCHHHHHHHHHHH
T ss_pred hHHHHHHHHHH---HhcCCCHHHHHHHHHHh
Confidence 34455555432 23688999999888764
No 9
>d2fnaa1 a.4.5.11 (A:284-356) Hypothetical protein SSO1545, C-terminal domain {Sulfolobus solfataricus [TaxId: 2287]}
Probab=9.32 E-value=1.5e+02 Score=16.07 Aligned_cols=24 Identities=8% Similarity=0.383 Sum_probs=15.2
Q ss_pred HHHHHHHHhcCCChhhHHHHHHhh
Q 033042 50 FMTYFGLVVEGKPWGSVMKKVRKD 73 (128)
Q Consensus 50 f~~~~~~~l~g~s~~~~~~~~~~~ 73 (128)
|...+..+.+|.+|+++++-++.+
T Consensus 8 Y~~ILkaia~G~rWs~IK~yle~~ 31 (73)
T d2fnaa1 8 YLNIMRTLSKCGKWSDVKRALELE 31 (73)
T ss_dssp HHHHHHHHTTCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHccCcHHHHHHHHHHH
Confidence 334443377888888888766543
No 10
>d1o17a1 a.46.2.1 (A:1-70) Anthranilate phosphoribosyltransferase (TrpD) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=8.26 E-value=1.5e+02 Score=15.10 Aligned_cols=51 Identities=10% Similarity=0.158 Sum_probs=33.5
Q ss_pred HHHhhhcCCCChHHHHHHHHHHHHh---hhHHHHHHHHHHHHHHhcCCChhhHHHH
Q 033042 17 KFLDAIFKGRDNKSVAKKVLLEQLI---FSPWINFLFMTYFGLVVEGKPWGSVMKK 69 (128)
Q Consensus 17 ~~L~~~~~~~~~~~~~~Kv~~Dq~v---~~P~~~~~f~~~~~~~l~g~s~~~~~~~ 69 (128)
..++++..+..+..-=.+-++|+.. .+|.-.+.|++.+. .+|.|.+|+..-
T Consensus 5 ~il~~l~~g~~Ls~~e~~~~~~~i~~g~~s~~qiaafL~al~--~kGet~~Ei~g~ 58 (70)
T d1o17a1 5 EILKKLINKSDLEINEAEELAKAIIRGEVPEILVSAILVALR--MKGESKNEIVGF 58 (70)
T ss_dssp HHHHHHHTTCCCCHHHHHHHHHHHHTTCSCHHHHHHHHHHHH--HHCCCHHHHHHH
T ss_pred HHHHHHHcCCCCCHHHHHHHHHHHHcCCCCHHHHHHHHHHHH--HcCCCHHHHHHH
Confidence 4566776665544444444445442 47888899997774 799998877653
Done!