BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>033046
MAASAEEERGEFVYRISTASEWEELQKNGSTFGGELDKSSGCFHLSKLDQVQPTLQNFFL
NSKEDLYLLQIGAKKLGDGLIYELVDGLNSFPHFYGPSRSFTPLPLDVVTKADKLSLSDG
RFSCSLLN

High Scoring Gene Products

Symbol, full name Information P value
AT4G01897 protein from Arabidopsis thaliana 5.3e-40
SPO2905
Uncharacterized protein
protein from Ruegeria pomeroyi DSS-3 2.0e-08
SPO_2905
conserved hypothetical protein
protein from Ruegeria pomeroyi DSS-3 2.0e-08
HNE_3489
Putative uncharacterized protein
protein from Hyphomonas neptunium ATCC 15444 2.1e-06

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  033046
        (128 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:1005716189 - symbol:AT4G01897 "AT4G01897" spec...   426  5.3e-40   1
UNIPROTKB|Q5LPE3 - symbol:SPO2905 "Uncharacterized protei...   128  2.0e-08   1
TIGR_CMR|SPO_2905 - symbol:SPO_2905 "conserved hypothetic...   128  2.0e-08   1
UNIPROTKB|Q0BWI3 - symbol:HNE_3489 "Putative uncharacteri...   109  2.1e-06   1


>TAIR|locus:1005716189 [details] [associations]
            symbol:AT4G01897 "AT4G01897" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
            "cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0005829 "cytosol" evidence=IDA] GO:GO:0005829
            EMBL:CP002687 GenomeReviews:CT486007_GR InterPro:IPR009297
            Pfam:PF06108 EMBL:AY086865 EMBL:BT024790 IPI:IPI00547476
            RefSeq:NP_849284.1 UniGene:At.34357 UniGene:At.69888
            ProteinModelPortal:Q8LC12 SMR:Q8LC12 STRING:Q8LC12 PaxDb:Q8LC12
            PRIDE:Q8LC12 EnsemblPlants:AT4G01897.1 GeneID:828216
            KEGG:ath:AT4G01897 TAIR:At4g01897 eggNOG:COG3502
            HOGENOM:HOG000050370 InParanoid:Q8LC12 OMA:FPHFYGP PhylomeDB:Q8LC12
            ProtClustDB:CLSN2690695 Genevestigator:Q8LC12 Uniprot:Q8LC12
        Length = 122

 Score = 426 (155.0 bits), Expect = 5.3e-40, P = 5.3e-40
 Identities = 81/123 (65%), Positives = 99/123 (80%)

Query:     5 AEEERGEFVYRISTASEWEELQKNGSTFGGELDKSSGCFHLSKLDQVQPTLQNFFLNSKE 64
             AEEE   F+YRIST  EWEE +KNGS++G E+DKS+  +HLSKLDQVQ TL+NFF++ KE
Sbjct:     2 AEEE---FIYRISTEQEWEEFKKNGSSYGAEIDKSTCYYHLSKLDQVQLTLKNFFVDVKE 58

Query:    65 DLYLLQIGAKKLGDGLIYELVDGLNSFPHFYGPSRSFTPLPLDVVTKADKLSLSDGRFSC 124
              LYLLQ+  KKLGDGLIYE VD +NSFPHFYGP ++F PLPLD V KA+KL+  +G F+C
Sbjct:    59 YLYLLQVDPKKLGDGLIYEAVDEVNSFPHFYGPDKTFVPLPLDSVVKAEKLTFINGNFTC 118

Query:   125 SLL 127
             S L
Sbjct:   119 SFL 121


>UNIPROTKB|Q5LPE3 [details] [associations]
            symbol:SPO2905 "Uncharacterized protein" species:246200
            "Ruegeria pomeroyi DSS-3" [GO:0003674 "molecular_function"
            evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
            [GO:0008150 "biological_process" evidence=ND] EMBL:CP000031
            GenomeReviews:CP000031_GR InterPro:IPR009297 Pfam:PF06108
            HOGENOM:HOG000050370 OMA:YKIVTET RefSeq:YP_168113.1
            ProteinModelPortal:Q5LPE3 SMR:Q5LPE3 DNASU:3193245 GeneID:3193245
            KEGG:sil:SPO2905 PATRIC:23379235 ProtClustDB:CLSK933988
            Uniprot:Q5LPE3
        Length = 112

 Score = 128 (50.1 bits), Expect = 2.0e-08, P = 2.0e-08
 Identities = 29/83 (34%), Positives = 42/83 (50%)

Query:    13 VYRISTASEWEELQKNGSTFGGELDKSSGCFHLSKLDQVQPTLQNFFLNSKEDLYLLQIG 72
             +Y+I  A EW  L+++G + G  +D + G  H S  +Q   T    F  + E L LL   
Sbjct:     3 IYKIFRADEWAALERDGQSVGAPVDLADGFVHFSTAEQAGETAAKHFAGA-EGLVLLACE 61

Query:    73 AKKLGDGLIYELVDGLNSFPHFY 95
             A  +GD L +E+  G   FPH Y
Sbjct:    62 ADAMGDVLKWEVSRGGALFPHLY 84


>TIGR_CMR|SPO_2905 [details] [associations]
            symbol:SPO_2905 "conserved hypothetical protein"
            species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003674
            "molecular_function" evidence=ND] [GO:0005575 "cellular_component"
            evidence=ND] [GO:0008150 "biological_process" evidence=ND]
            EMBL:CP000031 GenomeReviews:CP000031_GR InterPro:IPR009297
            Pfam:PF06108 HOGENOM:HOG000050370 OMA:YKIVTET RefSeq:YP_168113.1
            ProteinModelPortal:Q5LPE3 SMR:Q5LPE3 DNASU:3193245 GeneID:3193245
            KEGG:sil:SPO2905 PATRIC:23379235 ProtClustDB:CLSK933988
            Uniprot:Q5LPE3
        Length = 112

 Score = 128 (50.1 bits), Expect = 2.0e-08, P = 2.0e-08
 Identities = 29/83 (34%), Positives = 42/83 (50%)

Query:    13 VYRISTASEWEELQKNGSTFGGELDKSSGCFHLSKLDQVQPTLQNFFLNSKEDLYLLQIG 72
             +Y+I  A EW  L+++G + G  +D + G  H S  +Q   T    F  + E L LL   
Sbjct:     3 IYKIFRADEWAALERDGQSVGAPVDLADGFVHFSTAEQAGETAAKHFAGA-EGLVLLACE 61

Query:    73 AKKLGDGLIYELVDGLNSFPHFY 95
             A  +GD L +E+  G   FPH Y
Sbjct:    62 ADAMGDVLKWEVSRGGALFPHLY 84


>UNIPROTKB|Q0BWI3 [details] [associations]
            symbol:HNE_3489 "Putative uncharacterized protein"
            species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0003674
            "molecular_function" evidence=ND] [GO:0005575 "cellular_component"
            evidence=ND] [GO:0008150 "biological_process" evidence=ND]
            EMBL:CP000158 GenomeReviews:CP000158_GR InterPro:IPR009297
            Pfam:PF06108 eggNOG:COG3502 HOGENOM:HOG000050370 RefSeq:YP_762160.1
            ProteinModelPortal:Q0BWI3 STRING:Q0BWI3 GeneID:4287951
            KEGG:hne:HNE_3489 PATRIC:32219861 OMA:YKIVTET
            BioCyc:HNEP228405:GI69-3489-MONOMER Uniprot:Q0BWI3
        Length = 114

 Score = 109 (43.4 bits), Expect = 2.1e-06, P = 2.1e-06
 Identities = 30/90 (33%), Positives = 45/90 (50%)

Query:     8 ERGEFVYRISTASEWEELQKNGSTFGGELDKSSGCFHLSKLDQVQPTLQNFFLNSKEDLY 67
             ER  FVY++ T  EW+  +  G      LD++ G  HLS   Q+  T +  F + +  + 
Sbjct:     2 ERA-FVYKLLTEEEWQAAESVGHA-ASALDQADGYIHLSTRAQLAETARRHF-SGRGRIR 58

Query:    68 LLQIGAKKLGDGLIYELVDGLNSFPHFYGP 97
             LL+  +  L   L +E   G + FPH YGP
Sbjct:    59 LLEFDSAVLAP-LRWEPSRGGDIFPHLYGP 87


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.316   0.135   0.394    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      128       128   0.00091  102 3  11 22  0.43    31
                                                     29  0.41    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  570 (61 KB)
  Total size of DFA:  130 KB (2083 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  13.10u 0.10s 13.20t   Elapsed:  00:00:01
  Total cpu time:  13.10u 0.10s 13.20t   Elapsed:  00:00:01
  Start:  Fri May 10 12:12:46 2013   End:  Fri May 10 12:12:47 2013

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