BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033047
(128 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6NYP0|TM208_DANRE Transmembrane protein 208 OS=Danio rerio GN=tmem208 PE=2 SV=1
Length = 175
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 70/113 (61%), Gaps = 1/113 (0%)
Query: 11 EENARHMEKLRRLIIACNVIYFVVRMIIFHSTFTWKHWVGLVLTSVAYAIPYQQLSAMAK 70
EEN ++ R+I+ N IY V +++F+++ ++ W L+ Y Y+ +SAMAK
Sbjct: 17 EENQDTLKFYSRIILGANAIYIAVNLLLFYNSSSFWTWFSLMFAVAVYVGSYRSMSAMAK 76
Query: 71 PTYTDDGELIDGGFDMS-TGGICGYLHDVIYITSFVQVMSILSEKFWYTYLVV 122
P + +DG L+DGG D++ G+ +L DVI +T+ VQV+S LS FWY +L+
Sbjct: 77 PAFAEDGSLLDGGIDLNMEQGMAEHLKDVILLTAIVQVLSTLSSYFWYLWLLA 129
>sp|Q54UB0|TM208_DICDI Transmembrane protein 208 homolog OS=Dictyostelium discoideum
GN=tmem208 PE=3 SV=1
Length = 173
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 75/123 (60%), Gaps = 2/123 (1%)
Query: 1 MANQGAKKRKEENARHMEKLRRLIIACNVIYFVVRMIIFHS-TFTWKHWVGLVLTSVAYA 59
MAN GAKKRK +N + + K+R LI+A I +++ +++HS TF W + +
Sbjct: 1 MANSGAKKRKTQNEKELFKVR-LIMAAGTIPYILYRVVYHSETFGGWLWFAYLSLNALNM 59
Query: 60 IPYQQLSAMAKPTYTDDGELIDGGFDMSTGGICGYLHDVIYITSFVQVMSILSEKFWYTY 119
Y +++M K TY ++GELIDGG D++ GG+ Y D+IY+ +Q + ++S+K Y
Sbjct: 60 FAYYIITSMCKLTYDNNGELIDGGSDLNQGGMTEYYFDIIYVCCIIQGLGLISDKCLYLI 119
Query: 120 LVV 122
LV+
Sbjct: 120 LVI 122
>sp|Q3SZZ5|TM208_BOVIN Transmembrane protein 208 OS=Bos taurus GN=TMEM208 PE=2 SV=1
Length = 173
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 74/123 (60%), Gaps = 1/123 (0%)
Query: 1 MANQGAKKRKEENARHMEKLRRLIIACNVIYFVVRMIIFHSTFTWKHWVGLVLTSVAYAI 60
+ +G K+ EEN ++ R+I+ N IY +V +++F+S+ ++ W+ L+ + Y
Sbjct: 7 VGTRGKKQIFEENKETLKFYLRIILGANAIYCLVTLVVFYSSASFWAWMALLFSLAVYGA 66
Query: 61 PYQQLSAMAKPTYTDDGELIDGGFDMS-TGGICGYLHDVIYITSFVQVMSILSEKFWYTY 119
Y +S+MA+ +++DG L+DGG D++ G+ +L DVI +T+ VQV+S S W +
Sbjct: 67 SYHSMSSMARAAFSEDGALVDGGMDLNMEQGMAEHLKDVILLTAIVQVLSCFSLYIWSFW 126
Query: 120 LVV 122
L+
Sbjct: 127 LLA 129
>sp|Q9CR96|TM208_MOUSE Transmembrane protein 208 OS=Mus musculus GN=Tmem208 PE=2 SV=1
Length = 173
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 72/122 (59%), Gaps = 1/122 (0%)
Query: 2 ANQGAKKRKEENARHMEKLRRLIIACNVIYFVVRMIIFHSTFTWKHWVGLVLTSVAYAIP 61
+G K+ EEN ++ R+I+ N IY +V ++ F+S+ ++ W+ L + Y
Sbjct: 8 GTRGKKQIFEENKETLKFYLRIILGANAIYCLVTLVFFYSSASFWAWMALGFSLAVYGAS 67
Query: 62 YQQLSAMAKPTYTDDGELIDGGFDMS-TGGICGYLHDVIYITSFVQVMSILSEKFWYTYL 120
Y +S+MA+ ++++DG L+DGG D++ G+ +L DVI +T+ VQV+S S W +L
Sbjct: 68 YHSMSSMARASFSEDGSLMDGGMDLNMEQGMAEHLKDVILLTAIVQVLSCFSLYIWSFWL 127
Query: 121 VV 122
+
Sbjct: 128 LA 129
>sp|Q9BTX3|TM208_HUMAN Transmembrane protein 208 OS=Homo sapiens GN=TMEM208 PE=2 SV=1
Length = 173
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 72/123 (58%), Gaps = 1/123 (0%)
Query: 1 MANQGAKKRKEENARHMEKLRRLIIACNVIYFVVRMIIFHSTFTWKHWVGLVLTSVAYAI 60
+ +G K+ EEN ++ R+I+ N IY +V ++ F+S+ ++ W+ L + Y
Sbjct: 7 VGTRGKKQIFEENRETLKFYLRIILGANAIYCLVTLVFFYSSASFWAWLALGFSLAVYGA 66
Query: 61 PYQQLSAMAKPTYTDDGELIDGGFDMS-TGGICGYLHDVIYITSFVQVMSILSEKFWYTY 119
Y +S+MA+ +++DG L+DGG D++ G+ +L DVI +T+ VQV+S S W +
Sbjct: 67 SYHSMSSMARAAFSEDGALMDGGMDLNMEQGMAEHLKDVILLTAIVQVLSCFSLYVWSFW 126
Query: 120 LVV 122
L+
Sbjct: 127 LLA 129
>sp|Q0IHJ0|TM208_XENLA Transmembrane protein 208 OS=Xenopus laevis GN=tmem208 PE=2 SV=1
Length = 174
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 68/113 (60%), Gaps = 1/113 (0%)
Query: 11 EENARHMEKLRRLIIACNVIYFVVRMIIFHSTFTWKHWVGLVLTSVAYAIPYQQLSAMAK 70
EEN + R+I+ V+ + + +F+S+ + W LV + + YA Y+ + +MA+
Sbjct: 17 EENKETLSFYLRIILGATVLCGAINLGVFYSSSNFWTWATLVFSGIVYAGAYRSMRSMAQ 76
Query: 71 PTYTDDGELIDGGFDMS-TGGICGYLHDVIYITSFVQVMSILSEKFWYTYLVV 122
++++DG L+DGG D++ G+ ++ D++ +T+ VQV+S S FWY +L+
Sbjct: 77 ASFSEDGSLLDGGIDLNMEQGMAEHIKDIVLLTAIVQVLSCFSLYFWYFWLLA 129
>sp|Q5ZK32|TM208_CHICK Transmembrane protein 208 OS=Gallus gallus GN=TMEM208 PE=2 SV=1
Length = 179
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 63/122 (51%), Gaps = 10/122 (8%)
Query: 11 EENARHMEKLRRLIIACNVIYFVVRMIIFHSTFTWKHWVGLVLTSVAYAIPYQQLSAMAK 70
EEN + R+I+ + +Y V +++F+ + W+ +S Y Y+ +S+MA+
Sbjct: 17 EENRETLRFYLRIILGASAVYAAVNLVVFYPAASAWTWLAFAFSSAVYGASYRSMSSMAR 76
Query: 71 PTYTDDGELIDGGFD--MSTG--GICGYLH------DVIYITSFVQVMSILSEKFWYTYL 120
P + DDG L DGG D M G C + H DVI +T+ VQV+S S WY +L
Sbjct: 77 PAFADDGSLADGGIDLNMEQGWQSECPHPHEPRHLKDVILLTAMVQVLSCFSLYVWYFWL 136
Query: 121 VV 122
+
Sbjct: 137 LA 138
>sp|O14193|MUG69_SCHPO Meiotically up-regulated gene 69 protein OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=mug69 PE=1 SV=4
Length = 192
Score = 37.4 bits (85), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 56/123 (45%), Gaps = 2/123 (1%)
Query: 1 MANQGAKKRKEENARHMEKLRRLIIACNVIYFVVRMIIFHSTFTWKHWVGLVLTSVAYAI 60
MAN KK +N + + + NV+++++R + + +V S++
Sbjct: 1 MANAAQKKLAAQNKHILTFMLAADLIVNVLFWILRFFVRSGLSKFSKFV-YAFASISSGF 59
Query: 61 PYQQLSAMAKPTYTDDGELIDGGFDMSTGGICGYLHDVIYITSFVQVMSIL-SEKFWYTY 119
+ QL A P Y G L+ G D+ G+ Y+ D +Y + + ++ L S K + Y
Sbjct: 60 LHYQLHRAAAPKYDARGSLLYVGQDLLQEGVTSYMVDYMYFSWILIFLAALTSVKVFAFY 119
Query: 120 LVV 122
L+V
Sbjct: 120 LLV 122
>sp|Q1ZXI9|FSLO_DICDI Frizzled and smoothened-like protein O OS=Dictyostelium discoideum
GN=fslO PE=3 SV=1
Length = 695
Score = 30.0 bits (66), Expect = 4.0, Method: Composition-based stats.
Identities = 25/105 (23%), Positives = 46/105 (43%), Gaps = 15/105 (14%)
Query: 26 ACNVIYFVVRMIIFHSTFTWKHW--VGLVLTSVAYAIPYQQLSAM------------AKP 71
AC+ Y + +F + +T ++W V L +T++ AI Y A +
Sbjct: 242 ACS-FYLIFTFGVFPNKYTNRNWIIVYLGITAICLAISYAVQEARYGGGDWRCTSDPGRY 300
Query: 72 TYTDDGELIDGGFDMSTGGICGYLHDVIYITSFVQVMSILSEKFW 116
++DG I GGF GG+ L +Y M++++ K++
Sbjct: 301 KSSEDGTCILGGFFFQIGGLGTILFLSLYSFDMFLTMNMMTNKYF 345
>sp|Q5RIU9|PORED_DANRE Polyprenol reductase OS=Danio rerio GN=srd5a3 PE=2 SV=1
Length = 309
Score = 29.3 bits (64), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 24/52 (46%)
Query: 39 FHSTFTWKHWVGLVLTSVAYAIPYQQLSAMAKPTYTDDGELIDGGFDMSTGG 90
F + TW H VG +L A + +Q LS +AK G++ M GG
Sbjct: 186 FFNQLTWYHVVGTLLFFWASFLQHQSLSLLAKMRTDSSGKVETLAHKMPCGG 237
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.327 0.139 0.432
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,085,042
Number of Sequences: 539616
Number of extensions: 1663581
Number of successful extensions: 4690
Number of sequences better than 100.0: 16
Number of HSP's better than 100.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 4675
Number of HSP's gapped (non-prelim): 16
length of query: 128
length of database: 191,569,459
effective HSP length: 94
effective length of query: 34
effective length of database: 140,845,555
effective search space: 4788748870
effective search space used: 4788748870
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 55 (25.8 bits)