BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033051
(128 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1FC7|A Chain A, Photosystem Ii D1 C-Terminal Processing Protease
pdb|1FC9|A Chain A, Photosystem Ii D1 C-Terminal Processing Protease
pdb|1FCF|A Chain A, Photosystem Ii D1 C-Terminal Processing Protease
Length = 388
Score = 73.9 bits (180), Expect = 2e-14, Method: Composition-based stats.
Identities = 45/88 (51%), Positives = 61/88 (69%), Gaps = 5/88 (5%)
Query: 14 GGLVKAGLDVAQIWLD-GDETLVNAVDREGHTLPINMVDGHAI-THDPLVVLVNEGSASA 71
GGL AG++VA++ +D GD L+ D +G I DG++I + PLVVLVN G+ASA
Sbjct: 241 GGLFPAGVNVARMLVDRGDLVLI--ADSQG-IRDIYSADGNSIDSATPLVVLVNRGTASA 297
Query: 72 SEILAGALHDNGRAILVGHKTFGKGKIQ 99
SE+LAGAL D+ R ++ G +TFGKG IQ
Sbjct: 298 SEVLAGALKDSKRGLIAGERTFGKGLIQ 325
>pdb|1FC6|A Chain A, Photosystem Ii D1 C-Terminal Processing Protease
Length = 388
Score = 72.8 bits (177), Expect = 4e-14, Method: Composition-based stats.
Identities = 45/88 (51%), Positives = 60/88 (68%), Gaps = 5/88 (5%)
Query: 14 GGLVKAGLDVAQIWLD-GDETLVNAVDREGHTLPINMVDGHAI-THDPLVVLVNEGSASA 71
GGL AG++VA+ +D GD L+ D +G I DG++I + PLVVLVN G+ASA
Sbjct: 241 GGLFPAGVNVARXLVDRGDLVLI--ADSQG-IRDIYSADGNSIDSATPLVVLVNRGTASA 297
Query: 72 SEILAGALHDNGRAILVGHKTFGKGKIQ 99
SE+LAGAL D+ R ++ G +TFGKG IQ
Sbjct: 298 SEVLAGALKDSKRGLIAGERTFGKGLIQ 325
>pdb|3DOR|A Chain A, Crystal Structure Of Mature Cpaf
pdb|3DOR|B Chain B, Crystal Structure Of Mature Cpaf
pdb|3DPM|A Chain A, Structure Of Mature Cpaf Complexed With Lactacystin
pdb|3DPM|B Chain B, Structure Of Mature Cpaf Complexed With Lactacystin
Length = 583
Score = 38.9 bits (89), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 59 PLVVLVNEGSASASEILAGALHDNGRAILVGHKTFGKGKIQVYNVSYCQASSAQMLNL 116
P+ VL+NE S ++ L DN RA++VG +T G G V+NV + + + +L
Sbjct: 456 PICVLINEQDFSCADFFPVVLKDNDRALIVGTRTAGAGGF-VFNVQFPNRTGIKTCSL 512
>pdb|3DJA|A Chain A, Crystal Structure Of Cpaf Solved With Mad
pdb|3DJA|B Chain B, Crystal Structure Of Cpaf Solved With Mad
Length = 579
Score = 38.9 bits (89), Expect = 9e-04, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 59 PLVVLVNEGSASASEILAGALHDNGRAILVGHKTFGKGKIQVYNVSY 105
P+ VL+NE S ++ L DN RA++VG +T G G V+NV +
Sbjct: 458 PICVLINEQDFSCADFFPVVLKDNDRALIVGTRTAGAGGF-VFNVQF 503
>pdb|3DPN|A Chain A, Crystal Structure Of Cpaf S499a Mutant
pdb|3DPN|B Chain B, Crystal Structure Of Cpaf S499a Mutant
Length = 583
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 59 PLVVLVNEGSASASEILAGALHDNGRAILVGHKTFGKGKIQVYNVSYCQASSAQMLNL 116
P+ VL+NE + ++ L DN RA++VG +T G G V+NV + + + +L
Sbjct: 456 PICVLINEQDFACADFFPVVLKDNDRALIVGTRTAGAGGF-VFNVQFPNRTGIKTCSL 512
>pdb|2XUF|A Chain A, Crystal Structure Of Mache-Y337a-Tz2pa6 Anti Complex (1
Mth)
pdb|2XUF|B Chain B, Crystal Structure Of Mache-Y337a-Tz2pa6 Anti Complex (1
Mth)
pdb|2XUG|A Chain A, Crystal Structure Of Mache-Y337a-Tz2pa6 Anti Complex (1
Wk)
pdb|2XUG|B Chain B, Crystal Structure Of Mache-Y337a-Tz2pa6 Anti Complex (1
Wk)
Length = 544
Score = 32.0 bits (71), Expect = 0.11, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 10/60 (16%)
Query: 38 VDREGHTLP---------INMVDGHAITHDPLVVLVNEGSASASEILAGALHDNGRAILV 88
VD E H LP + +VDG ++ P L+N G ++L G + D G A LV
Sbjct: 282 VDHEWHVLPQESIFRFSFVPVVDGDFLSDTP-EALINTGDFQDLQVLVGVVKDEGSAFLV 340
>pdb|2XUD|A Chain A, Crystal Structure Of The Y337a Mutant Of Mouse
Acetylcholinesterase
pdb|2XUD|B Chain B, Crystal Structure Of The Y337a Mutant Of Mouse
Acetylcholinesterase
pdb|2XUH|A Chain A, Crystal Structure Of Mache-Y337a-Tz2pa6 Anti Complex (10
Mth)
pdb|2XUH|B Chain B, Crystal Structure Of Mache-Y337a-Tz2pa6 Anti Complex (10
Mth)
pdb|2XUI|A Chain A, Crystal Structure Of Mache-Y337a-Tz2pa6 Syn Complex (1 Wk)
pdb|2XUI|B Chain B, Crystal Structure Of Mache-Y337a-Tz2pa6 Syn Complex (1 Wk)
pdb|2XUJ|A Chain A, Crystal Structure Of Mache-Y337a-Tz2pa6 Syn Complex (1
Mth)
pdb|2XUJ|B Chain B, Crystal Structure Of Mache-Y337a-Tz2pa6 Syn Complex (1
Mth)
pdb|2XUK|A Chain A, Crystal Structure Of Mache-Y337a-Tz2pa6 Syn Complex (10
Mth)
pdb|2XUK|B Chain B, Crystal Structure Of Mache-Y337a-Tz2pa6 Syn Complex (10
Mth)
pdb|2XUO|A Chain A, Crystal Structure Of Mache-Y337a Mutant In Complex With
Soaked Tz2pa6 Anti Inhibitor
pdb|2XUO|B Chain B, Crystal Structure Of Mache-Y337a Mutant In Complex With
Soaked Tz2pa6 Anti Inhibitor
pdb|2XUP|A Chain A, Crystal Structure Of The Mache-Y337a Mutant In Complex
With Soaked Tz2pa6 Syn Inhibitor
pdb|2XUP|B Chain B, Crystal Structure Of The Mache-Y337a Mutant In Complex
With Soaked Tz2pa6 Syn Inhibitor
pdb|2XUQ|A Chain A, Crystal Structure Of The Mache-Y337a Mutant In Complex
With Soaked Tz2pa6 Anti-Syn Inhibitors
pdb|2XUQ|B Chain B, Crystal Structure Of The Mache-Y337a Mutant In Complex
With Soaked Tz2pa6 Anti-Syn Inhibitors
Length = 543
Score = 32.0 bits (71), Expect = 0.11, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 10/60 (16%)
Query: 38 VDREGHTLP---------INMVDGHAITHDPLVVLVNEGSASASEILAGALHDNGRAILV 88
VD E H LP + +VDG ++ P L+N G ++L G + D G A LV
Sbjct: 282 VDHEWHVLPQESIFRFSFVPVVDGDFLSDTP-EALINTGDFQDLQVLVGVVKDEGSAFLV 340
>pdb|3PIU|A Chain A, High-Resolution Structure Of Native Malus Domestica Acc
Synthase
Length = 410
Score = 29.6 bits (65), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 23/39 (58%)
Query: 50 VDGHAITHDPLVVLVNEGSASASEILAGALHDNGRAILV 88
+ G+ +T DP +++ G+ SA+E L D G A+L+
Sbjct: 85 IRGNKVTFDPNHLVLTAGATSANETFIFCLADPGEAVLI 123
>pdb|1M7Y|A Chain A, Crystal Structure Of Apple Acc Synthase In Complex With L-
Aminoethoxyvinylglycine
pdb|1M4N|A Chain A, Crystal Structure Of Apple Acc Synthase In Complex With
[2-(Amino-
Oxy)ethyl](5'-Deoxyadenosin-5'-Yl)(Methyl)sulfonium
Length = 435
Score = 29.6 bits (65), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 23/39 (58%)
Query: 50 VDGHAITHDPLVVLVNEGSASASEILAGALHDNGRAILV 88
+ G+ +T DP +++ G+ SA+E L D G A+L+
Sbjct: 102 IRGNKVTFDPNHLVLTAGATSANETFIFCLADPGEAVLI 140
>pdb|1B8G|A Chain A, 1-aminocyclopropane-1-carboxylate Synthase
pdb|1B8G|B Chain B, 1-aminocyclopropane-1-carboxylate Synthase
Length = 429
Score = 29.3 bits (64), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 23/39 (58%)
Query: 50 VDGHAITHDPLVVLVNEGSASASEILAGALHDNGRAILV 88
+ G+ +T DP +++ G+ SA+E L D G A+L+
Sbjct: 100 IRGNKVTFDPNHLVLTAGATSANETFIFCLADPGEAVLI 138
>pdb|2C0P|A Chain A, Aged Form Of Mouse Acetylcholinesterase Inhibited By Tabun
pdb|2C0P|B Chain B, Aged Form Of Mouse Acetylcholinesterase Inhibited By Tabun
pdb|2C0Q|A Chain A, Non-Aged Form Of Mouse Acetylcholinesterase Inhibited By
Tabun
pdb|2C0Q|B Chain B, Non-Aged Form Of Mouse Acetylcholinesterase Inhibited By
Tabun
pdb|2JEY|A Chain A, Mus Musculus Acetylcholinesterase In Complex With Hlo-7
pdb|2JEY|B Chain B, Mus Musculus Acetylcholinesterase In Complex With Hlo-7
pdb|2WHR|A Chain A, Crystal Structure Of Acetylcholinesterase In Complex With
K027
pdb|2WHR|B Chain B, Crystal Structure Of Acetylcholinesterase In Complex With
K027
pdb|4A23|A Chain A, Mus Musculus Acetylcholinesterase In Complex With Racemic
C5685
pdb|4A23|B Chain B, Mus Musculus Acetylcholinesterase In Complex With Racemic
C5685
pdb|4ARA|A Chain A, Mus Musculus Acetylcholinesterase In Complex With
(r)-c5685 At 2.5 A Resolution.
pdb|4ARA|B Chain B, Mus Musculus Acetylcholinesterase In Complex With
(r)-c5685 At 2.5 A Resolution.
pdb|4ARB|A Chain A, Mus Musculus Acetylcholinesterase In Complex With
(s)-c5685 At 2.25 A Resolution.
pdb|4ARB|B Chain B, Mus Musculus Acetylcholinesterase In Complex With
(s)-c5685 At 2.25 A Resolution
Length = 548
Score = 29.3 bits (64), Expect = 0.56, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 10/60 (16%)
Query: 38 VDREGHTLP---------INMVDGHAITHDPLVVLVNEGSASASEILAGALHDNGRAILV 88
VD E H LP + +VDG ++ P L+N G ++L G + D G LV
Sbjct: 282 VDHEWHVLPQESIFRFSFVPVVDGDFLSDTP-EALINTGDFQDLQVLVGVVKDEGSYFLV 340
>pdb|1Q83|A Chain A, Crystal Structure Of The Mouse Acetylcholinesterase-Tz2pa6
Syn Complex
pdb|1Q83|B Chain B, Crystal Structure Of The Mouse Acetylcholinesterase-Tz2pa6
Syn Complex
pdb|1Q84|A Chain A, Crystal Structure Of The Mouse Acetylcholinesterase-Tz2pa6
Anti Complex
pdb|1Q84|B Chain B, Crystal Structure Of The Mouse Acetylcholinesterase-Tz2pa6
Anti Complex
Length = 580
Score = 29.3 bits (64), Expect = 0.56, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 10/60 (16%)
Query: 38 VDREGHTLP---------INMVDGHAITHDPLVVLVNEGSASASEILAGALHDNGRAILV 88
VD E H LP + +VDG ++ P L+N G ++L G + D G LV
Sbjct: 313 VDHEWHVLPQESIFRFSFVPVVDGDFLSDTP-EALINTGDFQDLQVLVGVVKDEGSYFLV 371
>pdb|1KU6|A Chain A, Fasciculin 2-Mouse Acetylcholinesterase Complex
Length = 549
Score = 29.3 bits (64), Expect = 0.56, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 10/60 (16%)
Query: 38 VDREGHTLP---------INMVDGHAITHDPLVVLVNEGSASASEILAGALHDNGRAILV 88
VD E H LP + +VDG ++ P L+N G ++L G + D G LV
Sbjct: 282 VDHEWHVLPQESIFRFSFVPVVDGDFLSDTP-EALINTGDFQDLQVLVGVVKDEGSYFLV 340
>pdb|1MAH|A Chain A, Fasciculin2-Mouse Acetylcholinesterase Complex
pdb|1J06|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase In The Apo
Form
pdb|1J06|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase In The Apo
Form
pdb|1J07|A Chain A, Crystal Structure Of The Mouse
Acetylcholinesterase-Decidium Complex
pdb|1J07|B Chain B, Crystal Structure Of The Mouse
Acetylcholinesterase-Decidium Complex
pdb|1N5R|A Chain A, Crystal Structure Of The Mouse
Acetylcholinesterase-Propidium Complex
pdb|1N5R|B Chain B, Crystal Structure Of The Mouse
Acetylcholinesterase-Propidium Complex
pdb|2H9Y|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase Complexed
With M-(N,N, N-Trimethylammonio)trifluoroacetophenone
pdb|2H9Y|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase Complexed
With M-(N,N, N-Trimethylammonio)trifluoroacetophenone
pdb|2HA0|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase Complexed
With 4- Ketoamyltrimethylammonium
pdb|2HA0|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase Complexed
With 4- Ketoamyltrimethylammonium
pdb|2HA2|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase Complexed
With Succinylcholine
pdb|2HA2|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase Complexed
With Succinylcholine
pdb|2HA3|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase Complexed
With Choline
pdb|2HA3|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase Complexed
With Choline
pdb|2GYU|A Chain A, Crystal Structure Of Mus Musculus Acetylcholinesterase In
Complex With Hi-6
pdb|2GYU|B Chain B, Crystal Structure Of Mus Musculus Acetylcholinesterase In
Complex With Hi-6
pdb|2GYV|A Chain A, Crystal Structure Of Mus Musculus Acetylcholinesterase In
Complex With Ortho-7
pdb|2GYV|B Chain B, Crystal Structure Of Mus Musculus Acetylcholinesterase In
Complex With Ortho-7
pdb|2GYW|A Chain A, Crystal Structure Of Mus Musculus Acetylcholinesterase In
Complex With Obidoxime
pdb|2GYW|B Chain B, Crystal Structure Of Mus Musculus Acetylcholinesterase In
Complex With Obidoxime
pdb|2WLS|A Chain A, Crystal Structure Of Mus Musculus Acetylcholinesterase In
Complex With Amts13
pdb|2WLS|B Chain B, Crystal Structure Of Mus Musculus Acetylcholinesterase In
Complex With Amts13
pdb|4BC0|A Chain A, Structure Of Mouse Acetylcholinesterase Inhibited By Cbdp
( 12-h Soak): Cresyl-phosphoserine Adduct
pdb|4BC0|B Chain B, Structure Of Mouse Acetylcholinesterase Inhibited By Cbdp
( 12-h Soak): Cresyl-phosphoserine Adduct
pdb|4BC0|C Chain C, Structure Of Mouse Acetylcholinesterase Inhibited By Cbdp
( 12-h Soak): Cresyl-phosphoserine Adduct
pdb|4BC0|D Chain D, Structure Of Mouse Acetylcholinesterase Inhibited By Cbdp
( 12-h Soak): Cresyl-phosphoserine Adduct
pdb|4BC1|A Chain A, Structure Of Mouse Acetylcholinesterase Inhibited By Cbdp
( 30-min Soak): Cresyl-saligenin-phosphoserine Adduct
pdb|4BC1|B Chain B, Structure Of Mouse Acetylcholinesterase Inhibited By Cbdp
( 30-min Soak): Cresyl-saligenin-phosphoserine Adduct
pdb|4BC1|C Chain C, Structure Of Mouse Acetylcholinesterase Inhibited By Cbdp
( 30-min Soak): Cresyl-saligenin-phosphoserine Adduct
pdb|4BC1|D Chain D, Structure Of Mouse Acetylcholinesterase Inhibited By Cbdp
( 30-min Soak): Cresyl-saligenin-phosphoserine Adduct
Length = 543
Score = 29.3 bits (64), Expect = 0.56, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 10/60 (16%)
Query: 38 VDREGHTLP---------INMVDGHAITHDPLVVLVNEGSASASEILAGALHDNGRAILV 88
VD E H LP + +VDG ++ P L+N G ++L G + D G LV
Sbjct: 282 VDHEWHVLPQESIFRFSFVPVVDGDFLSDTP-EALINTGDFQDLQVLVGVVKDEGSYFLV 340
>pdb|4A16|A Chain A, Structure Of Mouse Acetylcholinesterase Complex With
Huprine Derivative
pdb|4A16|B Chain B, Structure Of Mouse Acetylcholinesterase Complex With
Huprine Derivative
pdb|4A16|C Chain C, Structure Of Mouse Acetylcholinesterase Complex With
Huprine Derivative
pdb|4A16|D Chain D, Structure Of Mouse Acetylcholinesterase Complex With
Huprine Derivative
Length = 545
Score = 29.3 bits (64), Expect = 0.56, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 10/60 (16%)
Query: 38 VDREGHTLP---------INMVDGHAITHDPLVVLVNEGSASASEILAGALHDNGRAILV 88
VD E H LP + +VDG ++ P L+N G ++L G + D G LV
Sbjct: 279 VDHEWHVLPQESIFRFSFVPVVDGDFLSDTP-EALINTGDFQDLQVLVGVVKDEGSYFLV 337
>pdb|2WHP|B Chain B, Crystal Structure Of Acetylcholinesterase, Phosphonylated
By Sarin And In Complex With Hi-6
Length = 548
Score = 29.3 bits (64), Expect = 0.56, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 10/60 (16%)
Query: 38 VDREGHTLP---------INMVDGHAITHDPLVVLVNEGSASASEILAGALHDNGRAILV 88
VD E H LP + +VDG ++ P L+N G ++L G + D G LV
Sbjct: 282 VDHEWHVLPQESIFRFSFVPVVDGDFLSDTP-EALINTGDFQDLQVLVGVVKDEGSYFLV 340
>pdb|3DL7|B Chain B, Aged Form Of Mouse Acetylcholinesterase Inhibited By
Tabun- Update
Length = 534
Score = 29.3 bits (64), Expect = 0.56, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 10/60 (16%)
Query: 38 VDREGHTLP---------INMVDGHAITHDPLVVLVNEGSASASEILAGALHDNGRAILV 88
VD E H LP + +VDG ++ P L+N G ++L G + D G LV
Sbjct: 273 VDHEWHVLPQESIFRFSFVPVVDGDFLSDTP-EALINTGDFQDLQVLVGVVKDEGSYFLV 331
>pdb|3DL7|A Chain A, Aged Form Of Mouse Acetylcholinesterase Inhibited By
Tabun- Update
Length = 538
Score = 29.3 bits (64), Expect = 0.56, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 10/60 (16%)
Query: 38 VDREGHTLP---------INMVDGHAITHDPLVVLVNEGSASASEILAGALHDNGRAILV 88
VD E H LP + +VDG ++ P L+N G ++L G + D G LV
Sbjct: 277 VDHEWHVLPQESIFRFSFVPVVDGDFLSDTP-EALINTGDFQDLQVLVGVVKDEGSYFLV 335
>pdb|2JGJ|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Aged Methamidophos
Length = 535
Score = 29.3 bits (64), Expect = 0.56, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 10/60 (16%)
Query: 38 VDREGHTLP---------INMVDGHAITHDPLVVLVNEGSASASEILAGALHDNGRAILV 88
VD E H LP + +VDG ++ P L+N G ++L G + D G LV
Sbjct: 273 VDHEWHVLPQESIFRFSFVPVVDGDFLSDTP-EALINTGDFQDLQVLVGVVKDEGSYFLV 331
>pdb|2JGE|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Non-Aged Methamidophos
pdb|2JGJ|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Aged Methamidophos
Length = 536
Score = 29.3 bits (64), Expect = 0.56, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 10/60 (16%)
Query: 38 VDREGHTLP---------INMVDGHAITHDPLVVLVNEGSASASEILAGALHDNGRAILV 88
VD E H LP + +VDG ++ P L+N G ++L G + D G LV
Sbjct: 276 VDHEWHVLPQESIFRFSFVPVVDGDFLSDTP-EALINTGDFQDLQVLVGVVKDEGSYFLV 334
>pdb|2JGE|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Non-Aged Methamidophos
Length = 533
Score = 29.3 bits (64), Expect = 0.56, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 10/60 (16%)
Query: 38 VDREGHTLP---------INMVDGHAITHDPLVVLVNEGSASASEILAGALHDNGRAILV 88
VD E H LP + +VDG ++ P L+N G ++L G + D G LV
Sbjct: 273 VDHEWHVLPQESIFRFSFVPVVDGDFLSDTP-EALINTGDFQDLQVLVGVVKDEGSYFLV 331
>pdb|2JGF|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Non-Aged Fenamiphos
pdb|2JGF|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Non-Aged Fenamiphos
pdb|2JGI|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Non-Aged Diisopropyl Fluorophosphate (Dfp)
pdb|2JGI|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Non-Aged Diisopropyl Fluorophosphate (Dfp)
pdb|2JGK|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Aged Fenamiphos
pdb|2JGK|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Aged Fenamiphos
pdb|2JGL|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Aged Vx And Sarin
pdb|2JGL|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Aged Vx And Sarin
pdb|2JGM|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Aged Diisopropyl Fluorophosphate (Dfp)
pdb|2JGM|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Aged Diisopropyl Fluorophosphate (Dfp)
pdb|2JEZ|A Chain A, Mus Musculus Acetylcholinesterase In Complex With Tabun
And Hlo-7
pdb|2JEZ|B Chain B, Mus Musculus Acetylcholinesterase In Complex With Tabun
And Hlo-7
pdb|2JF0|A Chain A, Mus Musculus Acetylcholinesterase In Complex With Tabun
And Ortho-7
pdb|2JF0|B Chain B, Mus Musculus Acetylcholinesterase In Complex With Tabun
And Ortho-7
pdb|3DL4|A Chain A, Non-Aged Form Of Mouse Acetylcholinesterase Inhibited By
Tabun- Update
pdb|3DL4|B Chain B, Non-Aged Form Of Mouse Acetylcholinesterase Inhibited By
Tabun- Update
pdb|2WHP|A Chain A, Crystal Structure Of Acetylcholinesterase, Phosphonylated
By Sarin And In Complex With Hi-6
pdb|2WHQ|A Chain A, Crystal Structure Of Acetylcholinesterase, Phosphonylated
By Sarin (Aged) In Complex With Hi-6
pdb|2WHQ|B Chain B, Crystal Structure Of Acetylcholinesterase, Phosphonylated
By Sarin (Aged) In Complex With Hi-6
pdb|2WU3|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase In Complex
With Fenamiphos And Hi-6
pdb|2WU3|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase In Complex
With Fenamiphos And Hi-6
pdb|2WU4|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase In Complex
With Fenamiphos And Ortho-7
pdb|2WU4|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase In Complex
With Fenamiphos And Ortho-7
pdb|2Y2U|A Chain A, Nonaged Form Of Mouse Acetylcholinesterase Inhibited By
Vx-Update
pdb|2Y2U|B Chain B, Nonaged Form Of Mouse Acetylcholinesterase Inhibited By
Vx-Update
pdb|2Y2V|A Chain A, Nonaged Form Of Mouse Acetylcholinesterase Inhibited By
Sarin-Update
pdb|2Y2V|B Chain B, Nonaged Form Of Mouse Acetylcholinesterase Inhibited By
Sarin-Update
Length = 548
Score = 29.3 bits (64), Expect = 0.56, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 10/60 (16%)
Query: 38 VDREGHTLP---------INMVDGHAITHDPLVVLVNEGSASASEILAGALHDNGRAILV 88
VD E H LP + +VDG ++ P L+N G ++L G + D G LV
Sbjct: 282 VDHEWHVLPQESIFRFSFVPVVDGDFLSDTP-EALINTGDFQDLQVLVGVVKDEGSYFLV 340
>pdb|2HA4|A Chain A, Crystal Structure Of Mutant S203a Of Mouse
Acetylcholinesterase Complexed With Acetylcholine
pdb|2HA4|B Chain B, Crystal Structure Of Mutant S203a Of Mouse
Acetylcholinesterase Complexed With Acetylcholine
pdb|2HA5|A Chain A, Crystal Structure Of Mutant S203a Of Acetylcholinesterase
Complexed With Acetylthiocholine
pdb|2HA5|B Chain B, Crystal Structure Of Mutant S203a Of Acetylcholinesterase
Complexed With Acetylthiocholine
pdb|2HA6|A Chain A, Crystal Structure Of Mutant S203a Of Mouse
Acetylcholinesterase Complexed With Succinylcholine
pdb|2HA6|B Chain B, Crystal Structure Of Mutant S203a Of Mouse
Acetylcholinesterase Complexed With Succinylcholine
pdb|2HA7|A Chain A, Crystal Structure Of Mutant S203a Of Mouse
Acetylcholinesterase Complexed With Butyrylthiocholine
pdb|2HA7|B Chain B, Crystal Structure Of Mutant S203a Of Mouse
Acetylcholinesterase Complexed With Butyrylthiocholine
Length = 543
Score = 29.3 bits (64), Expect = 0.56, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 10/60 (16%)
Query: 38 VDREGHTLP---------INMVDGHAITHDPLVVLVNEGSASASEILAGALHDNGRAILV 88
VD E H LP + +VDG ++ P L+N G ++L G + D G LV
Sbjct: 282 VDHEWHVLPQESIFRFSFVPVVDGDFLSDTP-EALINTGDFQDLQVLVGVVKDEGSYFLV 340
>pdb|1C2O|A Chain A, Electrophorus Electricus Acetylcholinesterase
pdb|1C2O|B Chain B, Electrophorus Electricus Acetylcholinesterase
pdb|1C2O|C Chain C, Electrophorus Electricus Acetylcholinesterase
pdb|1C2O|D Chain D, Electrophorus Electricus Acetylcholinesterase
Length = 539
Score = 29.3 bits (64), Expect = 0.56, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 10/60 (16%)
Query: 38 VDREGHTLP---------INMVDGHAITHDPLVVLVNEGSASASEILAGALHDNGRAILV 88
VD E H LP + +VDG ++ P L+N G ++L G + D G LV
Sbjct: 278 VDHEWHVLPQESIFRFSFVPVVDGDFLSDTP-EALINTGDFQDLQVLVGVVKDEGSYFLV 336
>pdb|1C2B|A Chain A, Electrophorus Electricus Acetylcholinesterase
Length = 540
Score = 29.3 bits (64), Expect = 0.56, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 10/60 (16%)
Query: 38 VDREGHTLP---------INMVDGHAITHDPLVVLVNEGSASASEILAGALHDNGRAILV 88
VD E H LP + +VDG ++ P L+N G ++L G + D G LV
Sbjct: 279 VDHEWHVLPQESIFRFSFVPVVDGDFLSDTP-EALINTGDFQDLQVLVGVVKDEGSYFLV 337
>pdb|1N5M|A Chain A, Crystal Structure Of The Mouse
Acetylcholinesterase-Gallamine Complex
pdb|1N5M|B Chain B, Crystal Structure Of The Mouse
Acetylcholinesterase-Gallamine Complex
Length = 541
Score = 29.3 bits (64), Expect = 0.56, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 10/60 (16%)
Query: 38 VDREGHTLP---------INMVDGHAITHDPLVVLVNEGSASASEILAGALHDNGRAILV 88
VD E H LP + +VDG ++ P L+N G ++L G + D G LV
Sbjct: 282 VDHEWHVLPQESIFRFSFVPVVDGDFLSDTP-EALINTGDFQDLQVLVGVVKDEGSYFLV 340
>pdb|1MAA|A Chain A, Mouse Acetylcholinesterase Catalytic Domain, Glycosylated
Protein
pdb|1MAA|B Chain B, Mouse Acetylcholinesterase Catalytic Domain, Glycosylated
Protein
pdb|1MAA|C Chain C, Mouse Acetylcholinesterase Catalytic Domain, Glycosylated
Protein
pdb|1MAA|D Chain D, Mouse Acetylcholinesterase Catalytic Domain, Glycosylated
Protein
Length = 547
Score = 29.3 bits (64), Expect = 0.56, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 10/60 (16%)
Query: 38 VDREGHTLP---------INMVDGHAITHDPLVVLVNEGSASASEILAGALHDNGRAILV 88
VD E H LP + +VDG ++ P L+N G ++L G + D G LV
Sbjct: 282 VDHEWHVLPQESIFRFSFVPVVDGDFLSDTP-EALINTGDFQDLQVLVGVVKDEGSYFLV 340
>pdb|1YNU|A Chain A, Crystal Structure Of Apple Acc Synthase In Complex With
L-Vinylglycine
Length = 473
Score = 29.3 bits (64), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 23/39 (58%)
Query: 50 VDGHAITHDPLVVLVNEGSASASEILAGALHDNGRAILV 88
+ G+ +T DP +++ G+ SA+E L D G A+L+
Sbjct: 102 IRGNKVTFDPNHLVLTAGATSANETFIFCLADPGEAVLI 140
>pdb|1CRK|A Chain A, Mitochondrial Creatine Kinase
pdb|1CRK|B Chain B, Mitochondrial Creatine Kinase
pdb|1CRK|C Chain C, Mitochondrial Creatine Kinase
pdb|1CRK|D Chain D, Mitochondrial Creatine Kinase
Length = 380
Score = 28.5 bits (62), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 25/52 (48%)
Query: 1 MVFFSPPSLSIFQGGLVKAGLDVAQIWLDGDETLVNAVDREGHTLPINMVDG 52
+F P S + G+ + D IW + D+T + ++ E HT I+M G
Sbjct: 187 FLFDKPVSPLLTCAGMARDWPDARGIWHNNDKTFLVWINEEDHTRVISMEKG 238
>pdb|1F8U|A Chain A, Crystal Structure Of Mutant E202q Of Human
Acetylcholinesterase Complexed With Green Mamba Venom
Peptide Fasciculin-ii
Length = 583
Score = 28.1 bits (61), Expect = 1.3, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 11/68 (16%)
Query: 38 VDREGHTLP---------INMVDGHAITHDPLVVLVNEGSASASEILAGALHDNGRAILV 88
V+ E H LP + +VDG ++ P L+N G ++L G + D G LV
Sbjct: 282 VNHEWHVLPQESVFRFSFVPVVDGDFLSDTP-EALINAGDFHGLQVLVGVVKDEGSYFLV 340
Query: 89 -GHKTFGK 95
G F K
Sbjct: 341 YGAPGFSK 348
>pdb|4EY4|A Chain A, Crystal Structure Of Recombinant Human
Acetylcholinesterase In The Apo State
pdb|4EY4|B Chain B, Crystal Structure Of Recombinant Human
Acetylcholinesterase In The Apo State
pdb|4EY5|A Chain A, Crystal Structure Of Recombinant Human
Acetylcholinesterase In Complex With (-)-Huperzine A
pdb|4EY5|B Chain B, Crystal Structure Of Recombinant Human
Acetylcholinesterase In Complex With (-)-Huperzine A
pdb|4EY6|A Chain A, Crystal Structure Of Recombinant Human
Acetylcholinesterase In Complex With (-)-Galantamine
pdb|4EY6|B Chain B, Crystal Structure Of Recombinant Human
Acetylcholinesterase In Complex With (-)-Galantamine
pdb|4EY7|A Chain A, Crystal Structure Of Recombinant Human
Acetylcholinesterase In Complex With Donepezil
pdb|4EY7|B Chain B, Crystal Structure Of Recombinant Human
Acetylcholinesterase In Complex With Donepezil
pdb|4EY8|A Chain A, Crystal Structure Of Recombinant Human
Acetylcholinesterase In Complex With Fasciculin-2
Length = 542
Score = 28.1 bits (61), Expect = 1.3, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 11/68 (16%)
Query: 38 VDREGHTLP---------INMVDGHAITHDPLVVLVNEGSASASEILAGALHDNGRAILV 88
V+ E H LP + +VDG ++ P L+N G ++L G + D G LV
Sbjct: 281 VNHEWHVLPQESVFRFSFVPVVDGDFLSDTP-EALINAGDFHGLQVLVGVVKDEGSYFLV 339
Query: 89 -GHKTFGK 95
G F K
Sbjct: 340 YGAPGFSK 347
>pdb|2X8B|A Chain A, Crystal Structure Of Human Acetylcholinesterase Inhibited
By Aged Tabun And Complexed With Fasciculin-Ii
Length = 583
Score = 28.1 bits (61), Expect = 1.3, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 11/68 (16%)
Query: 38 VDREGHTLP---------INMVDGHAITHDPLVVLVNEGSASASEILAGALHDNGRAILV 88
V+ E H LP + +VDG ++ P L+N G ++L G + D G LV
Sbjct: 282 VNHEWHVLPQESVFRFSFVPVVDGDFLSDTP-EALINAGDFHGLQVLVGVVKDEGSYFLV 340
Query: 89 -GHKTFGK 95
G F K
Sbjct: 341 YGAPGFSK 348
>pdb|3LII|A Chain A, Recombinant Human Acetylcholinesterase
pdb|3LII|B Chain B, Recombinant Human Acetylcholinesterase
Length = 540
Score = 28.1 bits (61), Expect = 1.3, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 11/68 (16%)
Query: 38 VDREGHTLP---------INMVDGHAITHDPLVVLVNEGSASASEILAGALHDNGRAILV 88
V+ E H LP + +VDG ++ P L+N G ++L G + D G LV
Sbjct: 279 VNHEWHVLPQESVFRFSFVPVVDGDFLSDTP-EALINAGDFHGLQVLVGVVKDEGSYFLV 337
Query: 89 -GHKTFGK 95
G F K
Sbjct: 338 YGAPGFSK 345
>pdb|1B41|A Chain A, Human Acetylcholinesterase Complexed With Fasciculin-Ii,
Glycosylated Protein
Length = 539
Score = 28.1 bits (61), Expect = 1.3, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 11/68 (16%)
Query: 38 VDREGHTLP---------INMVDGHAITHDPLVVLVNEGSASASEILAGALHDNGRAILV 88
V+ E H LP + +VDG ++ P L+N G ++L G + D G LV
Sbjct: 278 VNHEWHVLPQESVFRFSFVPVVDGDFLSDTP-EALINAGDFHGLQVLVGVVKDEGSYFLV 336
Query: 89 -GHKTFGK 95
G F K
Sbjct: 337 YGAPGFSK 344
>pdb|2DV6|A Chain A, Crystal Structure Of Nitrite Reductase From Hyphomicrobium
Denitrificans
pdb|2DV6|B Chain B, Crystal Structure Of Nitrite Reductase From Hyphomicrobium
Denitrificans
pdb|2DV6|C Chain C, Crystal Structure Of Nitrite Reductase From Hyphomicrobium
Denitrificans
pdb|2DV6|D Chain D, Crystal Structure Of Nitrite Reductase From Hyphomicrobium
Denitrificans
pdb|2DV6|E Chain E, Crystal Structure Of Nitrite Reductase From Hyphomicrobium
Denitrificans
pdb|2DV6|F Chain F, Crystal Structure Of Nitrite Reductase From Hyphomicrobium
Denitrificans
Length = 447
Score = 28.1 bits (61), Expect = 1.5, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 10/73 (13%)
Query: 38 VDREGHTLPINMVDGHAITHDPLV-------VLVNEGSASAS-EILAGALHD-NGRAILV 88
V EG T+ +N+V+G HD +V +VN +AS++ +A + + N +
Sbjct: 58 VVHEGETVQVNLVNGEGAQHDVVVDQYAARSAIVNGKNASSTFSFVASKVGEFNYYCSIA 117
Query: 89 GHKTFG-KGKIQV 100
GH+ G +G IQV
Sbjct: 118 GHRQAGMEGNIQV 130
>pdb|3LWT|X Chain X, Crystal Structure Of The Yeast Sac1: Implications For Its
Phosphoinositide Phosphatase Function
Length = 505
Score = 27.7 bits (60), Expect = 1.9, Method: Composition-based stats.
Identities = 11/20 (55%), Positives = 15/20 (75%)
Query: 28 LDGDETLVNAVDREGHTLPI 47
L GD LVN V+++GH LP+
Sbjct: 296 LYGDNYLVNLVNQKGHELPV 315
>pdb|3MOI|A Chain A, The Crystal Structure Of The Putative Dehydrogenase From
Bordetella Bronchiseptica Rb50
Length = 387
Score = 26.9 bits (58), Expect = 3.0, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 8/51 (15%)
Query: 29 DGDETLVNAVDREGHTLPINMVDGHAITHDPLV----VLVNEGSASASEIL 75
D + ++ AV+R G +++V G + +HDP+V +V EGS +L
Sbjct: 102 DEADRMIEAVERAG----VHLVVGTSRSHDPVVRTLRAIVQEGSVGRVSML 148
>pdb|1QK1|A Chain A, Crystal Structure Of Human Ubiquitous Mitochondrial
Creatine Kinase
pdb|1QK1|B Chain B, Crystal Structure Of Human Ubiquitous Mitochondrial
Creatine Kinase
pdb|1QK1|C Chain C, Crystal Structure Of Human Ubiquitous Mitochondrial
Creatine Kinase
pdb|1QK1|D Chain D, Crystal Structure Of Human Ubiquitous Mitochondrial
Creatine Kinase
pdb|1QK1|E Chain E, Crystal Structure Of Human Ubiquitous Mitochondrial
Creatine Kinase
pdb|1QK1|F Chain F, Crystal Structure Of Human Ubiquitous Mitochondrial
Creatine Kinase
pdb|1QK1|G Chain G, Crystal Structure Of Human Ubiquitous Mitochondrial
Creatine Kinase
pdb|1QK1|H Chain H, Crystal Structure Of Human Ubiquitous Mitochondrial
Creatine Kinase
Length = 379
Score = 26.9 bits (58), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 14/52 (26%), Positives = 25/52 (48%)
Query: 1 MVFFSPPSLSIFQGGLVKAGLDVAQIWLDGDETLVNAVDREGHTLPINMVDG 52
+F P S + G+ + D IW + +++ + V+ E HT I+M G
Sbjct: 187 FLFDKPVSPLLTAAGMARDWPDARGIWHNNEKSFLIWVNEEDHTRVISMEKG 238
>pdb|1J3B|A Chain A, Crystal Structure Of Atp-dependent Phosphoenolpyruvate
Carboxykinase From Thermus Thermophilus Hb8
pdb|1J3B|B Chain B, Crystal Structure Of Atp-dependent Phosphoenolpyruvate
Carboxykinase From Thermus Thermophilus Hb8
pdb|1XKV|A Chain A, Crystal Structure Of Atp-Dependent Phosphoenolpyruvate
Carboxykinase From Thermus Thermophilus Hb8
pdb|1XKV|B Chain B, Crystal Structure Of Atp-Dependent Phosphoenolpyruvate
Carboxykinase From Thermus Thermophilus Hb8
pdb|2PC9|A Chain A, Crystal Structure Of Atp-Dependent Phosphoenolpyruvate
Carboxykinase From Thermus Thermophilus Hb8
pdb|2PC9|B Chain B, Crystal Structure Of Atp-Dependent Phosphoenolpyruvate
Carboxykinase From Thermus Thermophilus Hb8
pdb|2PC9|C Chain C, Crystal Structure Of Atp-Dependent Phosphoenolpyruvate
Carboxykinase From Thermus Thermophilus Hb8
pdb|2PC9|D Chain D, Crystal Structure Of Atp-Dependent Phosphoenolpyruvate
Carboxykinase From Thermus Thermophilus Hb8
Length = 529
Score = 26.6 bits (57), Expect = 3.7, Method: Composition-based stats.
Identities = 15/54 (27%), Positives = 23/54 (42%)
Query: 50 VDGHAITHDPLVVLVNEGSASASEILAGALHDNGRAILVGHKTFGKGKIQVYNV 103
V G + H P V E + SE+ G ++VG K G+ K ++ V
Sbjct: 149 VPGFTVVHAPYFQAVPERDGTRSEVFVGISFQRRLVLIVGTKYAGEIKKSIFTV 202
>pdb|1VRP|A Chain A, The 2.1 Structure Of T. Californica Creatine Kinase
Complexed With The Transition-State Analogue Complex,
Adp- Mg 2+ NO3-CREATINE
pdb|1VRP|B Chain B, The 2.1 Structure Of T. Californica Creatine Kinase
Complexed With The Transition-State Analogue Complex,
Adp- Mg 2+ NO3-CREATINE
Length = 381
Score = 26.6 bits (57), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 24/52 (46%)
Query: 1 MVFFSPPSLSIFQGGLVKAGLDVAQIWLDGDETLVNAVDREGHTLPINMVDG 52
+F P S + G+ + D IW + D+T + V+ E H I+M G
Sbjct: 192 FLFDKPISPLLLASGMARDWPDGRGIWHNNDKTFLVWVNEEDHLRVISMQKG 243
>pdb|2GL6|A Chain A, Crystal Structure Of Human Sarcomeric Mitochondrial
Creatine Kinase
pdb|2GL6|B Chain B, Crystal Structure Of Human Sarcomeric Mitochondrial
Creatine Kinase
pdb|2GL6|C Chain C, Crystal Structure Of Human Sarcomeric Mitochondrial
Creatine Kinase
pdb|2GL6|D Chain D, Crystal Structure Of Human Sarcomeric Mitochondrial
Creatine Kinase
pdb|2GL6|E Chain E, Crystal Structure Of Human Sarcomeric Mitochondrial
Creatine Kinase
pdb|2GL6|F Chain F, Crystal Structure Of Human Sarcomeric Mitochondrial
Creatine Kinase
pdb|2GL6|G Chain G, Crystal Structure Of Human Sarcomeric Mitochondrial
Creatine Kinase
pdb|2GL6|H Chain H, Crystal Structure Of Human Sarcomeric Mitochondrial
Creatine Kinase
Length = 392
Score = 26.6 bits (57), Expect = 4.2, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 25/51 (49%)
Query: 2 VFFSPPSLSIFQGGLVKAGLDVAQIWLDGDETLVNAVDREGHTLPINMVDG 52
+F P S + G+ + D IW + D+T + ++ E HT I+M G
Sbjct: 203 LFDKPVSPLLTCAGMARDWPDARGIWHNYDKTFLIWINEEDHTRVISMEKG 253
>pdb|3S6H|A Chain A, Crystal Structure Of Native MmnagsK
pdb|3S6H|B Chain B, Crystal Structure Of Native MmnagsK
pdb|3S6H|X Chain X, Crystal Structure Of Native MmnagsK
pdb|3S6H|Y Chain Y, Crystal Structure Of Native MmnagsK
Length = 460
Score = 25.8 bits (55), Expect = 6.3, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Query: 41 EGHTLPINMVDGHAITHDPLVVLVNEGSASASEILAGALHD-NGRAILVGHKTF 93
E +P VDG +T D + ++ + A+ L A+ D GRA V F
Sbjct: 106 EAADIPTERVDGLRVTRDEAIPIIRDTLTQANLALVDAIRDAGGRAAAVPRGVF 159
>pdb|3S7Y|A Chain A, Crystal Structure Of Mmnags In Space Group P3121 At 4.3 A
Resolution
pdb|3S7Y|X Chain X, Crystal Structure Of Mmnags In Space Group P3121 At 4.3 A
Resolution
Length = 461
Score = 25.8 bits (55), Expect = 6.3, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Query: 41 EGHTLPINMVDGHAITHDPLVVLVNEGSASASEILAGALHD-NGRAILVGHKTF 93
E +P VDG +T D + ++ + A+ L A+ D GRA V F
Sbjct: 106 EAADIPTERVDGLRVTRDEAIPIIRDTLTQANLALVDAIRDAGGRAAAVPRGVF 159
>pdb|1GZ7|A Chain A, Crystal Structure Of The Closed State Of Lipase 2 From
Candida Rugosa
pdb|1GZ7|B Chain B, Crystal Structure Of The Closed State Of Lipase 2 From
Candida Rugosa
pdb|1GZ7|C Chain C, Crystal Structure Of The Closed State Of Lipase 2 From
Candida Rugosa
pdb|1GZ7|D Chain D, Crystal Structure Of The Closed State Of Lipase 2 From
Candida Rugosa
Length = 534
Score = 25.4 bits (54), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 6/57 (10%)
Query: 26 IWLDGDET------LVNAVDREGHTLPINMVDGHAITHDPLVVLVNEGSASASEILA 76
+W DGD T A+ + G +P + VDG T V+ + G SAS+ LA
Sbjct: 220 VWNDGDNTYNGKPLFRAAIMQSGCMVPSDPVDGTYGTEIYNQVVASAGCGSASDKLA 276
>pdb|3B6R|A Chain A, Crystal Structure Of Human Brain-Type Creatine Kinase
pdb|3B6R|B Chain B, Crystal Structure Of Human Brain-Type Creatine Kinase
pdb|3DRB|A Chain A, Crystal Structure Of Human Brain-Type Creatine Kinase
pdb|3DRB|B Chain B, Crystal Structure Of Human Brain-Type Creatine Kinase
pdb|3DRE|A Chain A, Crystal Structure Of Human Brain-Type Creatine Kinase
pdb|3DRE|B Chain B, Crystal Structure Of Human Brain-Type Creatine Kinase
Length = 381
Score = 25.4 bits (54), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 14/52 (26%), Positives = 24/52 (46%)
Query: 1 MVFFSPPSLSIFQGGLVKAGLDVAQIWLDGDETLVNAVDREGHTLPINMVDG 52
+F P S + G+ + D IW + ++T + V+ E H I+M G
Sbjct: 192 FLFDKPVSPLLLASGMARDWPDARGIWHNDNKTFLVWVNEEDHLRVISMQKG 243
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.137 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,773,707
Number of Sequences: 62578
Number of extensions: 142304
Number of successful extensions: 535
Number of sequences better than 100.0: 47
Number of HSP's better than 100.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 514
Number of HSP's gapped (non-prelim): 47
length of query: 128
length of database: 14,973,337
effective HSP length: 87
effective length of query: 41
effective length of database: 9,529,051
effective search space: 390691091
effective search space used: 390691091
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 45 (21.9 bits)