BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033051
(128 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P42784|CTPA_SYNP2 Carboxyl-terminal-processing protease OS=Synechococcus sp. (strain
ATCC 27264 / PCC 7002 / PR-6) GN=ctpA PE=3 SV=2
Length = 414
Score = 100 bits (249), Expect = 3e-21, Method: Composition-based stats.
Identities = 52/86 (60%), Positives = 67/86 (77%), Gaps = 2/86 (2%)
Query: 14 GGLVKAGLDVAQIWLDGDETLVNAVDREGHTLPINMVDGHAITHDPLVVLVNEGSASASE 73
GGL++AG+++A++WLD ET+V V+R+G + V G +T PLVVLVN+ +ASASE
Sbjct: 256 GGLLQAGIEIARLWLD-QETIVYTVNRQGIFESYSAV-GQPLTDAPLVVLVNQATASASE 313
Query: 74 ILAGALHDNGRAILVGHKTFGKGKIQ 99
ILAGAL DNGRA+LVG KTFGKG IQ
Sbjct: 314 ILAGALQDNGRAMLVGEKTFGKGLIQ 339
>sp|Q55669|CTPA_SYNY3 Carboxyl-terminal-processing protease OS=Synechocystis sp. (strain
PCC 6803 / Kazusa) GN=ctpA PE=3 SV=1
Length = 427
Score = 97.1 bits (240), Expect = 3e-20, Method: Composition-based stats.
Identities = 52/86 (60%), Positives = 65/86 (75%), Gaps = 2/86 (2%)
Query: 14 GGLVKAGLDVAQIWLDGDETLVNAVDREGHTLPINMVDGHAITHDPLVVLVNEGSASASE 73
GGL++AG+D+A++WL + T+V V+R+G T +G A T PLVVLVN+G+ASASE
Sbjct: 259 GGLLQAGIDIARLWLP-ESTIVYTVNRQG-TQESFTANGEAATDRPLVVLVNQGTASASE 316
Query: 74 ILAGALHDNGRAILVGHKTFGKGKIQ 99
ILAGAL DN RA LVG KTFGKG IQ
Sbjct: 317 ILAGALQDNQRATLVGEKTFGKGLIQ 342
>sp|O04073|CTPA_SCEOB C-terminal processing peptidase, chloroplastic OS=Scenedesmus
obliquus GN=ctpA PE=1 SV=1
Length = 464
Score = 74.7 bits (182), Expect = 1e-13, Method: Composition-based stats.
Identities = 45/88 (51%), Positives = 61/88 (69%), Gaps = 5/88 (5%)
Query: 14 GGLVKAGLDVAQIWLD-GDETLVNAVDREGHTLPINMVDGHAI-THDPLVVLVNEGSASA 71
GGL AG++VA++ +D GD L+ D +G I DG++I + PLVVLVN G+ASA
Sbjct: 317 GGLFPAGVNVARMLVDRGDLVLI--ADSQG-IRDIYSADGNSIDSATPLVVLVNRGTASA 373
Query: 72 SEILAGALHDNGRAILVGHKTFGKGKIQ 99
SE+LAGAL D+ R ++ G +TFGKG IQ
Sbjct: 374 SEVLAGALKDSKRGLIAGERTFGKGLIQ 401
>sp|Q44879|CTPA_BARBK Carboxy-terminal-processing protease OS=Bartonella bacilliformis
(strain ATCC 35685 / KC583) GN=ctpA PE=3 SV=1
Length = 434
Score = 65.5 bits (158), Expect = 9e-11, Method: Composition-based stats.
Identities = 33/91 (36%), Positives = 53/91 (58%)
Query: 9 LSIFQGGLVKAGLDVAQIWLDGDETLVNAVDREGHTLPINMVDGHAITHDPLVVLVNEGS 68
L + GGL+ + V +L+ E + ++ + + G P++VL+N GS
Sbjct: 233 LRLNPGGLLDQAISVTDAFLNKGEIVSTRGRKQNDVMRFDAKLGDLTDEKPIIVLINGGS 292
Query: 69 ASASEILAGALHDNGRAILVGHKTFGKGKIQ 99
ASASEI+AGAL D+ RA ++G ++FGKG +Q
Sbjct: 293 ASASEIVAGALQDHRRATIIGTQSFGKGSVQ 323
>sp|P23865|PRC_ECOLI Tail-specific protease OS=Escherichia coli (strain K12) GN=prc PE=1
SV=2
Length = 682
Score = 64.3 bits (155), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/68 (48%), Positives = 40/68 (58%)
Query: 34 LVNAVDREGHTLPINMVDGHAITHDPLVVLVNEGSASASEILAGALHDNGRAILVGHKTF 93
+V D G + DG PLVVLV+ SASASEI A A+ D GRA++VG TF
Sbjct: 416 IVQVRDNNGKVREDSDTDGQVFYKGPLVVLVDRFSASASEIFAAAMQDYGRALVVGEPTF 475
Query: 94 GKGKIQVY 101
GKG +Q Y
Sbjct: 476 GKGTVQQY 483
>sp|P43669|PRC_SALTY Tail-specific protease OS=Salmonella typhimurium (strain LT2 /
SGSC1412 / ATCC 700720) GN=prc PE=3 SV=2
Length = 682
Score = 62.8 bits (151), Expect = 7e-10, Method: Composition-based stats.
Identities = 33/68 (48%), Positives = 40/68 (58%)
Query: 34 LVNAVDREGHTLPINMVDGHAITHDPLVVLVNEGSASASEILAGALHDNGRAILVGHKTF 93
+V D G + DG PLVVLV+ SASASEI A A+ D GRA++VG TF
Sbjct: 416 IVQVRDNNGKVREDSDTDGVVYYKGPLVVLVDRFSASASEIFAAAMQDYGRALIVGEPTF 475
Query: 94 GKGKIQVY 101
GKG +Q Y
Sbjct: 476 GKGTVQQY 483
>sp|Q4L6D0|CTPAL_STAHJ Probable CtpA-like serine protease OS=Staphylococcus haemolyticus
(strain JCSC1435) GN=SH1486 PE=3 SV=2
Length = 496
Score = 60.5 bits (145), Expect = 3e-09, Method: Composition-based stats.
Identities = 37/88 (42%), Positives = 54/88 (61%), Gaps = 3/88 (3%)
Query: 14 GGLVKAGLDVAQIWLDGDETLVNAVDREGHTLPINMV-DGHAITHDPLV-VLVNEGSASA 71
GGL+ + +A I++D D+T+V +++ T I D D V +LVNEGSASA
Sbjct: 272 GGLLDEAVKMANIFIDKDQTVVK-LEKGDDTESIKTSNDASNEAKDMKVSILVNEGSASA 330
Query: 72 SEILAGALHDNGRAILVGHKTFGKGKIQ 99
SE+ GA+ D+ +A + G KTFGKG +Q
Sbjct: 331 SEVFTGAMRDHKKAKVYGSKTFGKGIVQ 358
>sp|Q49XN1|CTPAL_STAS1 Probable CtpA-like serine protease OS=Staphylococcus saprophyticus
subsp. saprophyticus (strain ATCC 15305 / DSM 20229)
GN=SSP1319 PE=3 SV=1
Length = 491
Score = 58.9 bits (141), Expect = 8e-09, Method: Composition-based stats.
Identities = 36/89 (40%), Positives = 54/89 (60%), Gaps = 5/89 (5%)
Query: 14 GGLVKAGLDVAQIWLDGDETLVNAVDREGHTLPI---NMVDGHAITHDPLVVLVNEGSAS 70
GGL+ + +A I++D +ET+V +++ H I N A D + +LVN+GSAS
Sbjct: 267 GGLLDEAVKMANIFIDKNETVVQ-LEKGKHKEAIKASNDASKEAKDMD-VSILVNKGSAS 324
Query: 71 ASEILAGALHDNGRAILVGHKTFGKGKIQ 99
ASE+ GA+ D +A + G KTFGKG +Q
Sbjct: 325 ASEVFTGAMKDYNKAKVYGSKTFGKGIVQ 353
>sp|Q8NWR2|CTPAL_STAAW Probable CtpA-like serine protease OS=Staphylococcus aureus (strain
MW2) GN=MW1310 PE=3 SV=1
Length = 496
Score = 56.6 bits (135), Expect = 5e-08, Method: Composition-based stats.
Identities = 36/88 (40%), Positives = 52/88 (59%), Gaps = 3/88 (3%)
Query: 14 GGLVKAGLDVAQIWLDGDETLVNAVDREGHTLPINMV-DGHAITHD-PLVVLVNEGSASA 71
GGL+ + +A I++D +T+V +++ T I D D + +LVNEGSASA
Sbjct: 272 GGLLDEAVKMANIFIDKGKTVVK-LEKGKDTEAIQTSNDALKEAKDMDISILVNEGSASA 330
Query: 72 SEILAGALHDNGRAILVGHKTFGKGKIQ 99
SE+ GAL D +A + G KTFGKG +Q
Sbjct: 331 SEVFTGALKDYNKAKVYGSKTFGKGVVQ 358
>sp|Q6G9E1|CTPAL_STAAS Probable CtpA-like serine protease OS=Staphylococcus aureus (strain
MSSA476) GN=SAS1363 PE=3 SV=1
Length = 496
Score = 56.6 bits (135), Expect = 5e-08, Method: Composition-based stats.
Identities = 36/88 (40%), Positives = 52/88 (59%), Gaps = 3/88 (3%)
Query: 14 GGLVKAGLDVAQIWLDGDETLVNAVDREGHTLPINMV-DGHAITHD-PLVVLVNEGSASA 71
GGL+ + +A I++D +T+V +++ T I D D + +LVNEGSASA
Sbjct: 272 GGLLDEAVKMANIFIDKGKTVVK-LEKGKDTEAIQTSNDALKEAKDMDISILVNEGSASA 330
Query: 72 SEILAGALHDNGRAILVGHKTFGKGKIQ 99
SE+ GAL D +A + G KTFGKG +Q
Sbjct: 331 SEVFTGALKDYNKAKVYGSKTFGKGVVQ 358
>sp|Q6GGY8|CTPAL_STAAR Probable CtpA-like serine protease OS=Staphylococcus aureus (strain
MRSA252) GN=SAR1432 PE=3 SV=1
Length = 496
Score = 56.6 bits (135), Expect = 5e-08, Method: Composition-based stats.
Identities = 36/88 (40%), Positives = 52/88 (59%), Gaps = 3/88 (3%)
Query: 14 GGLVKAGLDVAQIWLDGDETLVNAVDREGHTLPINMV-DGHAITHD-PLVVLVNEGSASA 71
GGL+ + +A I++D +T+V +++ T I D D + +LVNEGSASA
Sbjct: 272 GGLLDEAVKMANIFIDKGKTVVK-LEKGKDTEAIQTSNDALKEAKDMDISILVNEGSASA 330
Query: 72 SEILAGALHDNGRAILVGHKTFGKGKIQ 99
SE+ GAL D +A + G KTFGKG +Q
Sbjct: 331 SEVFTGALKDYNKAKVYGSKTFGKGVVQ 358
>sp|Q5HG01|CTPAL_STAAC Probable CtpA-like serine protease OS=Staphylococcus aureus (strain
COL) GN=SACOL1455 PE=3 SV=1
Length = 496
Score = 56.6 bits (135), Expect = 5e-08, Method: Composition-based stats.
Identities = 36/88 (40%), Positives = 52/88 (59%), Gaps = 3/88 (3%)
Query: 14 GGLVKAGLDVAQIWLDGDETLVNAVDREGHTLPINMV-DGHAITHD-PLVVLVNEGSASA 71
GGL+ + +A I++D +T+V +++ T I D D + +LVNEGSASA
Sbjct: 272 GGLLDEAVKMANIFIDKGKTVVK-LEKGKDTEAIQTSNDALKEAKDMDISILVNEGSASA 330
Query: 72 SEILAGALHDNGRAILVGHKTFGKGKIQ 99
SE+ GAL D +A + G KTFGKG +Q
Sbjct: 331 SEVFTGALKDYNKAKVYGSKTFGKGVVQ 358
>sp|Q2YXZ9|CTPAL_STAAB Probable CtpA-like serine protease OS=Staphylococcus aureus (strain
bovine RF122 / ET3-1) GN=SAB1275c PE=3 SV=1
Length = 496
Score = 56.6 bits (135), Expect = 5e-08, Method: Composition-based stats.
Identities = 36/88 (40%), Positives = 52/88 (59%), Gaps = 3/88 (3%)
Query: 14 GGLVKAGLDVAQIWLDGDETLVNAVDREGHTLPINMV-DGHAITHD-PLVVLVNEGSASA 71
GGL+ + +A I++D +T+V +++ T I D D + +LVNEGSASA
Sbjct: 272 GGLLDEAVKMANIFIDKGKTVVK-LEKGKDTEAIQTSNDALKEAKDMDISILVNEGSASA 330
Query: 72 SEILAGALHDNGRAILVGHKTFGKGKIQ 99
SE+ GAL D +A + G KTFGKG +Q
Sbjct: 331 SEVFTGALKDYNKAKVYGSKTFGKGVVQ 358
>sp|Q7A5M9|CTPAL_STAAN Probable CtpA-like serine protease OS=Staphylococcus aureus (strain
N315) GN=SA1253 PE=1 SV=1
Length = 496
Score = 56.2 bits (134), Expect = 5e-08, Method: Composition-based stats.
Identities = 36/89 (40%), Positives = 53/89 (59%), Gaps = 5/89 (5%)
Query: 14 GGLVKAGLDVAQIWLDGDETLVNAVDREGHTLPINMVDG---HAITHDPLVVLVNEGSAS 70
GGL+ + +A I++D +T+V +++ T I + A D + +LVNEGSAS
Sbjct: 272 GGLLDEAVKMANIFIDKGKTVVK-LEKGKDTEAIQTSNDSLKEAKDMD-ISILVNEGSAS 329
Query: 71 ASEILAGALHDNGRAILVGHKTFGKGKIQ 99
ASE+ GAL D +A + G KTFGKG +Q
Sbjct: 330 ASEVFTGALKDYNKAKVYGSKTFGKGVVQ 358
>sp|Q99U67|CTPAL_STAAM Probable CtpA-like serine protease OS=Staphylococcus aureus (strain
Mu50 / ATCC 700699) GN=SAV1420 PE=3 SV=1
Length = 496
Score = 56.2 bits (134), Expect = 5e-08, Method: Composition-based stats.
Identities = 36/89 (40%), Positives = 53/89 (59%), Gaps = 5/89 (5%)
Query: 14 GGLVKAGLDVAQIWLDGDETLVNAVDREGHTLPINMVDG---HAITHDPLVVLVNEGSAS 70
GGL+ + +A I++D +T+V +++ T I + A D + +LVNEGSAS
Sbjct: 272 GGLLDEAVKMANIFIDKGKTVVK-LEKGKDTEAIQTSNDSLKEAKDMD-ISILVNEGSAS 329
Query: 71 ASEILAGALHDNGRAILVGHKTFGKGKIQ 99
ASE+ GAL D +A + G KTFGKG +Q
Sbjct: 330 ASEVFTGALKDYNKAKVYGSKTFGKGVVQ 358
>sp|Q8CSK8|CTPAL_STAES Probable CtpA-like serine protease OS=Staphylococcus epidermidis
(strain ATCC 12228) GN=SE_1113 PE=3 SV=1
Length = 491
Score = 53.5 bits (127), Expect = 4e-07, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Query: 14 GGLVKAGLDVAQIWLDGDETLVN-AVDREGHTLPINMVDGHAITHDPLVVLVNEGSASAS 72
GGL+ + +A I++D T+V ++ L + + +LVNEGSASAS
Sbjct: 267 GGLLDEAVKMANIFIDKGNTVVQLEKGKDKEELKTSNQALKQAKDMKVSILVNEGSASAS 326
Query: 73 EILAGALHDNGRAILVGHKTFGKGKIQ 99
E+ GA+ D +A + G KTFGKG +Q
Sbjct: 327 EVFTGAMKDYHKAKVYGSKTFGKGIVQ 353
>sp|Q5HPB7|CTPAL_STAEQ Probable CtpA-like serine protease OS=Staphylococcus epidermidis
(strain ATCC 35984 / RP62A) GN=SERP0996 PE=3 SV=1
Length = 491
Score = 53.5 bits (127), Expect = 4e-07, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Query: 14 GGLVKAGLDVAQIWLDGDETLVN-AVDREGHTLPINMVDGHAITHDPLVVLVNEGSASAS 72
GGL+ + +A I++D T+V ++ L + + +LVNEGSASAS
Sbjct: 267 GGLLDEAVKMANIFIDKGNTVVQLEKGKDKEELKTSNQALKQAKDMKVSILVNEGSASAS 326
Query: 73 EILAGALHDNGRAILVGHKTFGKGKIQ 99
E+ GA+ D +A + G KTFGKG +Q
Sbjct: 327 EVFTGAMKDYHKAKVYGSKTFGKGIVQ 353
>sp|P45306|PRC_HAEIN Tail-specific protease OS=Haemophilus influenzae (strain ATCC 51907
/ DSM 11121 / KW20 / Rd) GN=prc PE=3 SV=1
Length = 695
Score = 52.8 bits (125), Expect = 6e-07, Method: Composition-based stats.
Identities = 29/69 (42%), Positives = 39/69 (56%), Gaps = 10/69 (14%)
Query: 60 LVVLVNEGSASASEILAGALHDNGRAILVGHKTFGKGKIQVYNVSYCQASSAQMLNLIHC 119
L V++N SASASEI A A+ D R I++G TFGKG +Q ++ LN I+
Sbjct: 449 LFVMINRYSASASEIFAAAMQDYRRGIIIGQNTFGKGTVQ----------QSRSLNFIYD 498
Query: 120 VDLSSLNCL 128
+D S L L
Sbjct: 499 LDQSPLGVL 507
>sp|O35002|CTPB_BACSU Carboxy-terminal processing protease CtpB OS=Bacillus subtilis
(strain 168) GN=ctpB PE=1 SV=1
Length = 480
Score = 50.4 bits (119), Expect = 3e-06, Method: Composition-based stats.
Identities = 29/86 (33%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Query: 14 GGLVKAGLDVAQIWLDGDETLVNAVDREGHTLPINMVDGHAITHDPLVVLVNEGSASASE 73
GG +++ ++ + ++ D+ + +R G H + P+ V+ ++GSASASE
Sbjct: 254 GGYLQSVEEILKHFVTKDQPYIQIAERNGDKKRYFSTLTHKKAY-PVNVITDKGSASASE 312
Query: 74 ILAGALHDNGRAILVGHKTFGKGKIQ 99
ILAGAL + G +VG +FGKG +Q
Sbjct: 313 ILAGALKEAGHYDVVGDTSFGKGTVQ 338
>sp|O34666|CTPA_BACSU Carboxy-terminal processing protease CtpA OS=Bacillus subtilis
(strain 168) GN=ctpA PE=2 SV=1
Length = 466
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/86 (34%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
Query: 14 GGLVKAGLDVAQIWLDGDETLVNAVDREGHTLPINMVDGHAITHDPLVVLVNEGSASASE 73
GGL++ + ++ +++D + ++ + G + +T P VVLVN+G+ASA+E
Sbjct: 242 GGLMEQAITMSNLFIDKGKNIMQVEYKNGSKEVMKAEKERKVTK-PTVVLVNDGTASAAE 300
Query: 74 ILAGALHDNGRAILVGHKTFGKGKIQ 99
I+A ALH++ L+G TFGKG +Q
Sbjct: 301 IMAAALHESSNVPLIGETTFGKGTVQ 326
>sp|Q9PL60|Y248_CHLMU Uncharacterized protein TC_0248 OS=Chlamydia muridarum (strain MoPn
/ Nigg) GN=TC_0248 PE=3 SV=1
Length = 601
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 59 PLVVLVNEGSASASEILAGALHDNGRAILVGHKTFGKGKIQVYNVSY 105
P+ VL+NE S ++ L DN RA++VG +T G G V+NV +
Sbjct: 480 PICVLINEQDFSCADFFPAILKDNDRALVVGTRTAGAGGF-VFNVQF 525
>sp|Q9Z6P3|Y1016_CHLPN Protein CPn_1016/CP_0837/CPj1016/CpB1054 OS=Chlamydia pneumoniae
GN=CPn_1016 PE=3 SV=2
Length = 619
Score = 38.9 bits (89), Expect = 0.010, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 59 PLVVLVNEGSASASEILAGALHDNGRAILVGHKTFGKGKIQVYNVSYCQASSAQMLNL 116
PL +L++E S ++ L DNGRA L+G T G G V+ V++ S + L+L
Sbjct: 481 PLFMLIDEDDFSCGDLAPAILKDNGRATLIGKPTAGAGGF-VFQVTFPNRSGIKGLSL 537
>sp|O84866|Y858_CHLTR Protein CT_858 OS=Chlamydia trachomatis (strain D/UW-3/Cx)
GN=CT_858 PE=1 SV=2
Length = 601
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 43/103 (41%), Gaps = 7/103 (6%)
Query: 16 LVKAGLDVAQIWLDGDETLVNAVDREGHTLPINMVDGHAITH--DPLVVLVNEGSASASE 73
L G V W GD L + G + H P+ VL+NE S ++
Sbjct: 439 LKSFGRQVLNCWSKGDIELSTPIPLFG----FEKIHPHPRVQYSKPICVLINEQDFSCAD 494
Query: 74 ILAGALHDNGRAILVGHKTFGKGKIQVYNVSYCQASSAQMLNL 116
L DN RA++VG +T G G V+NV + + + +L
Sbjct: 495 FFPVVLKDNDRALIVGTRTAGAGGF-VFNVQFPNRTGIKTCSL 536
>sp|Q8IWI9|MGAP_HUMAN MAX gene-associated protein OS=Homo sapiens GN=MGA PE=1 SV=2
Length = 3026
Score = 32.7 bits (73), Expect = 0.61, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 31 DETLVNAVDREGHTLPINMVDGHAITHDPLVVLVNEGSASASEILAGALHDNG 83
DET N++ RE T + +G A+ + V+ N G+A++ E L +L D G
Sbjct: 1940 DET--NSIKREQETKKVLQSEGEAVDPEANVIKQNSGAATSEETLNDSLEDRG 1990
>sp|P12661|RET3_BOVIN Retinol-binding protein 3 OS=Bos taurus GN=RBP3 PE=1 SV=1
Length = 1286
Score = 32.3 bits (72), Expect = 0.82, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 56 THDPLVVLVNEGSASASEILAGALHDNGRAILVGHKTFGKG-KIQVYNV 103
+H L VLV+ S SA+E A + D RA ++G T G + +Y V
Sbjct: 834 SHKDLYVLVSHTSGSAAEAFAHTMQDLQRATIIGEPTAGGALSVGIYQV 882
>sp|Q05537|CHID_SOLLC Basic endochitinase (Fragment) OS=Solanum lycopersicum GN=CHI14
PE=2 SV=1
Length = 246
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Query: 89 GHKTFGKGKIQV-YNVSYCQASSAQMLNLIHCVDL 122
G K FG+G IQ+ YN +Y A SA +NL++ DL
Sbjct: 111 GKKYFGRGPIQISYNYNYGAAGSAIGVNLLNNPDL 145
>sp|A4J9Z5|MNMC_BURVG tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional
protein MnmC OS=Burkholderia vietnamiensis (strain G4 /
LMG 22486) GN=mnmC PE=3 SV=1
Length = 653
Score = 32.0 bits (71), Expect = 1.2, Method: Composition-based stats.
Identities = 26/73 (35%), Positives = 33/73 (45%), Gaps = 9/73 (12%)
Query: 14 GGLVKAGLDVAQIWLDGDE------TLVNAVDREGHTLPINMVDGHAITHDPLVVLVNEG 67
G + AGL AQ+ G+ T V ++R+G T DG I P+VVL N G
Sbjct: 398 GAVWPAGLCAAQVAAAGERVTLRTGTEVARLERDGDTWRAIGADGATIAEAPVVVLANAG 457
Query: 68 SASASEILAGALH 80
A LAG H
Sbjct: 458 DAVR---LAGLRH 467
>sp|Q9LQ10|1A110_ARATH Probable aminotransferase ACS10 OS=Arabidopsis thaliana GN=ACS10
PE=2 SV=1
Length = 557
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 25/36 (69%)
Query: 53 HAITHDPLVVLVNEGSASASEILAGALHDNGRAILV 88
+++T DP +++ G++SA EIL+ L D+G A LV
Sbjct: 229 NSVTFDPSQLVLTSGASSAIEILSFCLADSGNAFLV 264
>sp|A8AW04|TRPF_STRGC N-(5'-phosphoribosyl)anthranilate isomerase OS=Streptococcus
gordonii (strain Challis / ATCC 35105 / CH1 / DL1 /
V288) GN=trpF PE=3 SV=1
Length = 195
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 21/37 (56%)
Query: 4 FSPPSLSIFQGGLVKAGLDVAQIWLDGDETLVNAVDR 40
F PSL+ Q + A LD+ QI D DE L+ +DR
Sbjct: 59 FVSPSLAELQEAISVANLDLVQIHGDFDEELLTQIDR 95
>sp|O62763|ACES_FELCA Acetylcholinesterase OS=Felis catus GN=ACHE PE=3 SV=1
Length = 611
Score = 30.0 bits (66), Expect = 4.1, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 11/68 (16%)
Query: 38 VDREGHTLP---------INMVDGHAITHDPLVVLVNEGSASASEILAGALHDNGRAILV 88
VD E H LP + +VDG ++ P L+N G ++L G + D G LV
Sbjct: 310 VDHEWHVLPQESVFRFSFVPVVDGDFLSDTP-EALINAGDFHGLQVLVGVVKDEGSYFLV 368
Query: 89 -GHKTFGK 95
G F K
Sbjct: 369 YGAPGFSK 376
>sp|P53517|AFAC_ECOLX Outer membrane usher protein AfaC OS=Escherichia coli GN=afaC PE=3
SV=1
Length = 859
Score = 29.6 bits (65), Expect = 6.5, Method: Composition-based stats.
Identities = 29/96 (30%), Positives = 38/96 (39%), Gaps = 16/96 (16%)
Query: 13 QGGLVKAGLDVAQIWLDGDETLVNAVDREGHTLPINMVDGHAITHDPLVVLVNEGSASAS 72
+G +V+AG G LV+ ++G LP V + V G A+ S
Sbjct: 759 KGAVVRAGFRTRV----GGRALVSLARQDGTPLPFGAV---------VTVEGERGQAAGS 805
Query: 73 EILAGALHDNGRAILVGHKTFGKGKIQVYNVSYCQA 108
AG + D G L G K GK K Q S C A
Sbjct: 806 ---AGVVGDRGEVYLSGLKESGKLKAQWGENSLCHA 838
>sp|P21836|ACES_MOUSE Acetylcholinesterase OS=Mus musculus GN=Ache PE=1 SV=1
Length = 614
Score = 29.3 bits (64), Expect = 6.8, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 10/60 (16%)
Query: 38 VDREGHTLP---------INMVDGHAITHDPLVVLVNEGSASASEILAGALHDNGRAILV 88
VD E H LP + +VDG ++ P L+N G ++L G + D G LV
Sbjct: 313 VDHEWHVLPQESIFRFSFVPVVDGDFLSDTP-EALINTGDFQDLQVLVGVVKDEGSYFLV 371
>sp|P37821|1A1C_MALDO 1-aminocyclopropane-1-carboxylate synthase OS=Malus domestica
GN=ACS-1 PE=1 SV=2
Length = 473
Score = 29.3 bits (64), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 23/39 (58%)
Query: 50 VDGHAITHDPLVVLVNEGSASASEILAGALHDNGRAILV 88
+ G+ +T DP +++ G+ SA+E L D G A+L+
Sbjct: 102 IRGNKVTFDPNHLVLTAGATSANETFIFCLADPGEAVLI 140
>sp|P70079|KCRU_CHICK Creatine kinase U-type, mitochondrial OS=Gallus gallus GN=CKMT1
PE=1 SV=1
Length = 417
Score = 29.3 bits (64), Expect = 7.2, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 26/51 (50%)
Query: 2 VFFSPPSLSIFQGGLVKAGLDVAQIWLDGDETLVNAVDREGHTLPINMVDG 52
+F P S S+ G+ + D IW + ++T + ++ E HT I+M G
Sbjct: 226 LFDKPVSPSLTAAGMARDWPDARGIWHNNEKTFLIWINEEDHTRVISMEKG 276
>sp|Q03SE4|SYH_LACBA Histidine--tRNA ligase OS=Lactobacillus brevis (strain ATCC 367 /
JCM 1170) GN=hisS PE=3 SV=1
Length = 431
Score = 29.3 bits (64), Expect = 8.0, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Query: 3 FFSPPSLSIFQGGLVKAGLDVAQIWLDGDETLVNAVDREGHTLPINMVDGHAITHDPLVV 62
F +P + + F VKA LD I D D T+V +D HT+ M D A+ V
Sbjct: 228 FLTPTATAHFD--RVKASLDALGIDYDVDATMVRGLDYYNHTIFEIMADSPALGEGYTTV 285
Query: 63 L 63
L
Sbjct: 286 L 286
>sp|P37136|ACES_RAT Acetylcholinesterase OS=Rattus norvegicus GN=Ache PE=2 SV=1
Length = 614
Score = 29.3 bits (64), Expect = 8.4, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 10/60 (16%)
Query: 38 VDREGHTLP---------INMVDGHAITHDPLVVLVNEGSASASEILAGALHDNGRAILV 88
VD E H LP + +VDG ++ P L+N G ++L G + D G LV
Sbjct: 313 VDHEWHVLPQESIFRFSFVPVVDGDFLSDTP-DALINTGDFQDLQVLVGVVKDEGSYFLV 371
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.137 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,735,942
Number of Sequences: 539616
Number of extensions: 1838393
Number of successful extensions: 5075
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 5033
Number of HSP's gapped (non-prelim): 57
length of query: 128
length of database: 191,569,459
effective HSP length: 94
effective length of query: 34
effective length of database: 140,845,555
effective search space: 4788748870
effective search space used: 4788748870
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)