BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033054
(128 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q39065|COPT1_ARATH Copper transporter 1 OS=Arabidopsis thaliana GN=COPT1 PE=2 SV=2
Length = 170
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 67/127 (52%), Positives = 89/127 (70%), Gaps = 6/127 (4%)
Query: 5 TFFWGTNTEILFPGWPGESFSCYILALIFVFMISLTVEWISHAKLIKSGI---SNVASGI 61
TFFWG NTE+LF GWPG S Y L LIFVF +++ EW++H+ L++ +N A+G+
Sbjct: 45 TFFWGKNTEVLFSGWPGTSSGMYALCLIFVFFLAVLTEWLAHSSLLRGSTGDSANRAAGL 104
Query: 62 LQTLMYAFRIGLAYLVMLAVMSFNIGVLLAAVAGYSVGFLIFGSQVFRNNLKIEPYQDLS 121
+QT +Y RIGLAYLVMLAVMSFN GV L A+AG++VGF++FGSQ FRN + +
Sbjct: 105 IQTAVYTLRIGLAYLVMLAVMSFNAGVFLVALAGHAVGFMLFGSQTFRN---TSDDRKTN 161
Query: 122 DLPPLNC 128
+PP C
Sbjct: 162 YVPPSGC 168
>sp|Q8GWP3|COPT6_ARATH Copper transporter 6 OS=Arabidopsis thaliana GN=COPT6 PE=2 SV=1
Length = 145
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 64/122 (52%), Positives = 91/122 (74%), Gaps = 2/122 (1%)
Query: 1 MGHITFFWGTNTEILFPGWPGESFSCYILALIFVFMISLTVEWISHAKLIK-SGISNVAS 59
M H+TFFWG NTEILF GWPG S Y+L LI VF++++ VEW++H+ +++ G ++ A
Sbjct: 24 MMHMTFFWGKNTEILFSGWPGTSLGMYVLCLIVVFLLAVIVEWLAHSSILRGRGSTSRAK 83
Query: 60 GILQTLMYAFRIGLAYLVMLAVMSFNIGVLLAAVAGYSVGFLIFGSQVFRNNLKIE-PYQ 118
G++QT +Y + GLAYLVMLAVMSFN GV + A+AG++VGF++FGS F+N E P++
Sbjct: 84 GLVQTAVYTLKTGLAYLVMLAVMSFNGGVFIVAIAGFAVGFMLFGSTAFKNPSDDEKPFE 143
Query: 119 DL 120
L
Sbjct: 144 QL 145
>sp|Q9STG2|COPT2_ARATH Copper transporter 2 OS=Arabidopsis thaliana GN=COPT2 PE=2 SV=1
Length = 158
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 60/121 (49%), Positives = 84/121 (69%), Gaps = 3/121 (2%)
Query: 6 FFWGTNTEILFPGWPGESFSCYILALIFVFMISLTVEWISHAKLIK-SGISNVASGILQT 64
FFWG NTE+LF GWPG S Y L LI +F++++ EW++H+ +++ SG +N A+G+ QT
Sbjct: 34 FFWGKNTEVLFSGWPGTSSGMYALCLIVIFLLAVIAEWLAHSPILRVSGSTNRAAGLAQT 93
Query: 65 LMYAFRIGLAYLVMLAVMSFNIGVLLAAVAGYSVGFLIFGSQVFRNNLKIEPYQDLSDLP 124
+Y + GL+YLVMLAVMSFN GV + A+AGY VGF +FGS F+ + +L LP
Sbjct: 94 AVYTLKTGLSYLVMLAVMSFNAGVFIVAIAGYGVGFFLFGSTTFKKPSDDQKTAEL--LP 151
Query: 125 P 125
P
Sbjct: 152 P 152
>sp|Q9FGU8|COPT3_ARATH Copper transporter 3 OS=Arabidopsis thaliana GN=COPT3 PE=2 SV=1
Length = 151
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 58/109 (53%), Positives = 77/109 (70%)
Query: 1 MGHITFFWGTNTEILFPGWPGESFSCYILALIFVFMISLTVEWISHAKLIKSGISNVASG 60
M H+TFFWG TE+LF GWPG S Y + L +F+IS E +S +KSG +++ G
Sbjct: 29 MMHMTFFWGKTTEVLFDGWPGTSLKMYWVCLAVIFVISAFSECLSRCGFMKSGPASLGGG 88
Query: 61 ILQTLMYAFRIGLAYLVMLAVMSFNIGVLLAAVAGYSVGFLIFGSQVFR 109
+LQT +Y R L+YLVMLAVMSFN GV +AA+AG+ +GF+IFGS+ FR
Sbjct: 89 LLQTAVYTVRAALSYLVMLAVMSFNGGVFVAAMAGFGLGFMIFGSRAFR 137
>sp|Q8SAA5|COPT4_ARATH Copper transporter 4 OS=Arabidopsis thaliana GN=COPT4 PE=2 SV=2
Length = 145
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/112 (47%), Positives = 71/112 (63%), Gaps = 3/112 (2%)
Query: 3 HITFFWGTNTEILFPGWPGESFSCYILALIFVFMISLTVEWI---SHAKLIKSGISNVAS 59
H TF+WG N ++LF GWPG Y LALIFVF ++ EW+ S A IK G +A
Sbjct: 31 HPTFYWGYNCQVLFSGWPGSDRGMYALALIFVFFLAFLAEWLARCSDASSIKQGADKLAK 90
Query: 60 GILQTLMYAFRIGLAYLVMLAVMSFNIGVLLAAVAGYSVGFLIFGSQVFRNN 111
+T MY + G +YLV+LAV+SFN GV LAA+ G+++GF +F + FRN
Sbjct: 91 VAFRTAMYTVKSGFSYLVILAVVSFNGGVFLAAIFGHALGFAVFRGRAFRNR 142
>sp|Q94EE4|COPT1_ORYSJ Copper transporter 1 OS=Oryza sativa subsp. japonica GN=COPT1 PE=2
SV=1
Length = 161
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/127 (40%), Positives = 78/127 (61%), Gaps = 7/127 (5%)
Query: 3 HITFFWGTNTEILFPGWPGESFSCYILALIFVFMISLTVEWISHAK-----LIKSGISNV 57
H+TFFWG N+E+LF WPG Y LALIFVF +++ VE++ + + +
Sbjct: 34 HMTFFWGKNSEVLFTMWPGTRGGMYALALIFVFALAVIVEFLGSRRADACLAALARRAPA 93
Query: 58 ASGILQTLMYAFRIGLAYLVMLAVMSFNIGVLLAAVAGYSVGFLIFGSQVFRNNLKIEPY 117
A G+ + ++ R+G+AYL+MLA+MSFN GV L AVAG++ GFL F + + ++E
Sbjct: 94 AGGLARAAVHTVRVGVAYLLMLALMSFNGGVFLVAVAGHAAGFLAFRAGLCGGPAQVE-- 151
Query: 118 QDLSDLP 124
+D + P
Sbjct: 152 EDRKNDP 158
>sp|Q60EN8|COPT2_ORYSJ Copper transporter 2 OS=Oryza sativa subsp. japonica GN=COPT2 PE=1
SV=1
Length = 151
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/129 (39%), Positives = 79/129 (61%), Gaps = 4/129 (3%)
Query: 3 HITFFWGTNTEILFPGWPGESFSCYILALIFVFMISLTVEWISHAKL---IKSGISNVAS 59
H+TFFWG NTE+LF WPG Y LA++F+F +++ +E+ + L + + A+
Sbjct: 24 HMTFFWGKNTEVLFTLWPGARGGMYALAILFMFALAVLLEFRGYRVLEARLARRRAPRAA 83
Query: 60 GILQTLMYAFRIGLAYLVMLAVMSFNIGVLLAAVAGYSVGFLIFGSQVFRNNLKIEPYQD 119
L+T ++A R+G+AYL+MLA+MSFN GV LA VAG++ GFL F + + P ++
Sbjct: 84 AALRTAVHAVRVGVAYLIMLALMSFNGGVFLAIVAGHAAGFLAFRAGLCGGG-PAPPLEE 142
Query: 120 LSDLPPLNC 128
P+ C
Sbjct: 143 DRKNDPVCC 151
>sp|Q7XTF8|COPT6_ORYSJ Copper transporter 6 OS=Oryza sativa subsp. japonica GN=COPT6 PE=2
SV=1
Length = 184
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/120 (41%), Positives = 71/120 (59%), Gaps = 15/120 (12%)
Query: 3 HITFFWGTNTEILFPGWPGESFS-CYILALIFVFMISLTVEWIS--------------HA 47
H+TFFW +L GWPGE + Y L L+FV ++ E +S +
Sbjct: 39 HMTFFWSDRAVVLIRGWPGERGAGMYALCLLFVLALAALTEGLSVLSRRLARRGGGAASS 98
Query: 48 KLIKSGISNVASGILQTLMYAFRIGLAYLVMLAVMSFNIGVLLAAVAGYSVGFLIFGSQV 107
+ + +S L T ++A R+G+AYLVMLAVMSFN+GVLLAAVAG+++GFL+ S+V
Sbjct: 99 DGGRPAPAPASSAALLTAVHAARMGMAYLVMLAVMSFNVGVLLAAVAGHALGFLLARSRV 158
>sp|Q10KT6|COPT4_ORYSJ Copper transporter 4 OS=Oryza sativa subsp. japonica GN=COPT4 PE=2
SV=1
Length = 183
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 55/111 (49%), Gaps = 12/111 (10%)
Query: 4 ITFFWGTNTEILFPGWPGESFSCYI------------LALIFVFMISLTVEWISHAKLIK 51
++F WG +LFP WPG+ + + S ++ +
Sbjct: 34 MSFTWGHRAVVLFPRWPGDRAGVGMYFLCLLLVLALAALAEALSAASRRLDLDLDLSRSR 93
Query: 52 SGISNVASGILQTLMYAFRIGLAYLVMLAVMSFNIGVLLAAVAGYSVGFLI 102
+L ++A R+GLAYLVMLAVMSFN GVLLAAVAG++ GFL+
Sbjct: 94 GRRRRRRQQLLAAGVHAARMGLAYLVMLAVMSFNAGVLLAAVAGHAAGFLL 144
>sp|Q5ZD08|COPT3_ORYSJ Copper transporter 3 OS=Oryza sativa subsp. japonica GN=COPT3 PE=2
SV=1
Length = 150
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/127 (42%), Positives = 73/127 (57%), Gaps = 7/127 (5%)
Query: 3 HITFFWGTNTEILFPGWPGESFSCYILALIFVFMISLTVEWISHAKLIKSGISNVASGIL 62
H+TF+WG N+EILF GWPG S Y LAL VF +++ +E++ ++ +S
Sbjct: 29 HMTFYWGKNSEILFTGWPGASGGMYALALAAVFALAVLLEFLGSPRVQESSSLGSRRRRA 88
Query: 63 QTLMYAFRI-GLAYLVMLAVMSFNIGVLLAAVAGYSVGFLIFGSQVFRNNLKIEPYQDLS 121
GLAYL+MLA+MSFN+GVLLAAVAG++ GFL FR L Y+
Sbjct: 89 TAAAVHAVRVGLAYLLMLALMSFNVGVLLAAVAGHAAGFL-----AFRAGLCGGGYKK-G 142
Query: 122 DLPPLNC 128
+L P C
Sbjct: 143 ELAPAAC 149
>sp|Q93VM8|COPT5_ARATH Copper transporter 5 OS=Arabidopsis thaliana GN=COPT5 PE=2 SV=1
Length = 146
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 59/131 (45%), Gaps = 25/131 (19%)
Query: 1 MGHITFFWGTNTEILFPGWPGESFSCYILALIFVFMISLTVEWISH-------------- 46
M H+TF+WG ILF W +S+ YIL LI F+ S +++ +
Sbjct: 1 MMHMTFYWGIKATILFDFWKTDSWLSYILTLIACFVFSAFYQYLENRRIQFKSLSSSRRA 60
Query: 47 -----------AKLIKSGISNVASGILQTLMYAFRIGLAYLVMLAVMSFNIGVLLAAVAG 95
A LI + A+ L++ + YL+MLA MSFN GV +A V G
Sbjct: 61 PPPPRSSSGVSAPLIPKSGTRSAAKAASVLLFGVNAAIGYLLMLAAMSFNGGVFIAIVVG 120
Query: 96 YSVGFLIFGSQ 106
+ G+ +F S
Sbjct: 121 LTAGYAVFRSD 131
>sp|Q7YXD4|P80_DICDI Protein P80 OS=Dictyostelium discoideum GN=p80 PE=2 SV=1
Length = 530
Score = 38.9 bits (89), Expect = 0.009, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 61 ILQTLMYAFRIGLAYLVMLAVMSFNIGVLLAAVAGYSVGFLIFGSQVFRN 110
I++ ++A + +Y +ML M+FN+ + A +AG VG ++FG +RN
Sbjct: 474 IIRGCLHAIELTCSYALMLVAMTFNVALFFAVIAGVLVGNILFGR--YRN 521
>sp|Q6Z0Q9|COP52_ORYSJ Putative copper transporter 5.2 OS=Oryza sativa subsp. japonica
GN=COPT5.2 PE=3 SV=1
Length = 176
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/31 (64%), Positives = 23/31 (74%)
Query: 73 LAYLVMLAVMSFNIGVLLAAVAGYSVGFLIF 103
+ YL+MLAVMSFN GV LA VAG + G L F
Sbjct: 123 VGYLLMLAVMSFNGGVFLAVVAGLAAGHLAF 153
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 1 MGHITFFWGTNTEILFPGWPGESFSCY 27
M H++F+WGT+ ILF GW + Y
Sbjct: 1 MMHMSFYWGTSVTILFDGWRTSGWPGY 27
>sp|Q69P80|COP51_ORYSJ Copper transporter 5.1 OS=Oryza sativa subsp. japonica GN=COPT5.1
PE=2 SV=1
Length = 149
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 63/134 (47%), Gaps = 28/134 (20%)
Query: 1 MGHITFFWGTNTEILFPGWPGESFSCYILALI----------FVFMISLTVEWISHAK-- 48
M H+TF+WG + ILF GW +++ Y+L+L+ ++ + V+ ++ AK
Sbjct: 1 MMHMTFYWGKDVTILFDGWRTATWTGYLLSLVALLLASAFYQYLEAFRIRVKLLAGAKPA 60
Query: 49 ----------------LIKSGISNVASGILQTLMYAFRIGLAYLVMLAVMSFNIGVLLAA 92
L S + + ++ GL YL+MLAVMSFN GV +A
Sbjct: 61 SIPPPASSDAARAPLLLPSSAAGRWPARLATAGLFGVNSGLGYLLMLAVMSFNGGVFVAV 120
Query: 93 VAGYSVGFLIFGSQ 106
V G + G+L F S
Sbjct: 121 VVGLAAGYLAFRSS 134
>sp|Q9CPU9|COPT2_MOUSE Probable low affinity copper uptake protein 2 OS=Mus musculus
GN=Slc31a2 PE=1 SV=1
Length = 143
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 27/40 (67%)
Query: 63 QTLMYAFRIGLAYLVMLAVMSFNIGVLLAAVAGYSVGFLI 102
Q+L++ ++ + Y VMLAVMS+N + L V G +VG+ +
Sbjct: 96 QSLVHVIQVVIGYFVMLAVMSYNTWIFLGVVLGSAVGYYL 135
>sp|O15432|COPT2_HUMAN Probable low affinity copper uptake protein 2 OS=Homo sapiens
GN=SLC31A2 PE=1 SV=1
Length = 143
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 26/38 (68%)
Query: 63 QTLMYAFRIGLAYLVMLAVMSFNIGVLLAAVAGYSVGF 100
Q+L++ ++ + Y +MLAVMS+N + L V G +VG+
Sbjct: 96 QSLIHVIQVVIGYFIMLAVMSYNTWIFLGVVLGSAVGY 133
>sp|O60830|TI17B_HUMAN Mitochondrial import inner membrane translocase subunit Tim17-B
OS=Homo sapiens GN=TIMM17B PE=1 SV=1
Length = 172
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 7/74 (9%)
Query: 55 SNVASGILQTLMYAFRIGLAYLVMLAVMSFNIGVLLAAVAGYSVGFLIFGSQVFRNNLKI 114
+++ SG L + A R G +V A+M G+LLA + G + + +Q FRN
Sbjct: 91 NSITSGALTGAVLAARSGPLAMVGSAMMG---GILLALIEGVGILLTRYTAQQFRN---A 144
Query: 115 EPY-QDLSDLPPLN 127
P+ +D S LPP +
Sbjct: 145 PPFLEDPSQLPPKD 158
>sp|P26904|DPPC_BACSU Dipeptide transport system permease protein DppC OS=Bacillus
subtilis (strain 168) GN=dppC PE=2 SV=2
Length = 320
Score = 30.0 bits (66), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 22/47 (46%)
Query: 53 GISNVASGILQTLMYAFRIGLAYLVMLAVMSFNIGVLLAAVAGYSVG 99
G + + Y RI L VM A++ F IGV+ VAGY G
Sbjct: 101 GTDELGRDVFTRTWYGARISLFVGVMAALIDFLIGVIYGGVAGYKGG 147
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.329 0.144 0.451
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,104,682
Number of Sequences: 539616
Number of extensions: 1412075
Number of successful extensions: 4717
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 4671
Number of HSP's gapped (non-prelim): 58
length of query: 128
length of database: 191,569,459
effective HSP length: 94
effective length of query: 34
effective length of database: 140,845,555
effective search space: 4788748870
effective search space used: 4788748870
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 55 (25.8 bits)