Query 033055
Match_columns 128
No_of_seqs 137 out of 328
Neff 4.1
Searched_HMMs 29240
Date Mon Mar 25 15:05:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033055.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/033055hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1mit_A RCMTI-V, trypsin inhibi 100.0 2.9E-32 9.9E-37 183.4 7.9 67 62-128 3-69 (69)
2 1vbw_A Trypsin inhibitor BGIT; 100.0 5.8E-32 2E-36 181.5 7.3 67 62-128 2-68 (68)
3 1dwm_A LUTI, linum usitatissin 100.0 3.2E-31 1.1E-35 178.2 7.8 67 62-128 4-70 (70)
4 1to2_I Chymotrypsin inhibitor 100.0 1.4E-30 4.9E-35 172.9 6.4 63 66-128 2-64 (64)
5 3rdy_A BWI-1=protease inhibito 100.0 4.5E-30 1.5E-34 178.1 7.7 66 62-127 13-78 (79)
6 2ci2_I Chymotrypsin inhibitor 100.0 4E-30 1.4E-34 178.7 7.3 66 63-128 18-83 (83)
7 1cse_I Eglin C; complex(serine 100.0 6.1E-30 2.1E-34 172.6 6.2 64 65-128 6-70 (70)
8 1cq4_A Protein (serine protein 99.9 4.2E-22 1.4E-26 125.7 4.7 46 66-111 2-47 (47)
9 1hym_A CMTI-V, hydrolyzed cucu 99.7 2.4E-17 8.1E-22 103.7 5.2 42 63-104 4-45 (45)
10 1hym_B CMTI-V, hydrolyzed cucu 99.1 3.8E-11 1.3E-15 67.9 2.8 24 105-128 1-24 (26)
11 3arc_K Photosystem II reaction 57.6 5.3 0.00018 23.8 1.7 18 5-22 16-33 (37)
12 3ouv_A Serine/threonine protei 40.1 16 0.00055 22.5 2.0 21 68-88 9-29 (71)
13 2kuf_A PKNB, serine/threonine- 37.3 47 0.0016 22.7 4.4 20 68-87 9-28 (139)
14 2kud_A PKNB, serine/threonine- 30.2 64 0.0022 22.1 4.1 21 67-87 9-29 (140)
15 4hde_A SCO1/SENC family lipopr 28.1 1.1E+02 0.0036 21.3 5.0 69 50-124 79-149 (170)
16 2kui_A PKNB, serine/threonine- 23.8 2.4E+02 0.0083 21.5 6.8 57 68-126 10-80 (275)
17 2qn4_A RASI, alpha-amylase/sub 22.8 28 0.00096 26.7 1.1 39 10-48 7-49 (200)
18 3ge3_E Toluene-4-monooxygenase 22.5 75 0.0026 22.2 3.2 25 80-104 27-51 (103)
19 3py9_A Protein kinase; pasta, 21.4 2.2E+02 0.0074 22.2 6.1 21 67-87 7-27 (294)
No 1
>1mit_A RCMTI-V, trypsin inhibitor V; serine protease inhibitor (RCMTI-V); NMR {Cucurbita maxima} SCOP: d.40.1.1 PDB: 1tin_A
Probab=99.97 E-value=2.9e-32 Score=183.41 Aligned_cols=67 Identities=64% Similarity=1.166 Sum_probs=65.7
Q ss_pred CCCCCCCCccccCcchHHHHHHHHHhCCCCeEEEecCCCccCCCCcCCeEEEEECCCCCEEecCcCC
Q 033055 62 DCPRKSSWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVTRDYRIDRVRVWVNKKGKVIRVPRIG 128 (128)
Q Consensus 62 ~C~gK~sWPELVG~~a~~A~~~I~~erP~v~vrVL~pGs~VTmDfr~dRVnV~VD~~g~VvrVP~VG 128 (128)
+|++|++||||||+++++|+.+|++|||++++|||++|+++||||||||||||+|++|+|+++|+||
T Consensus 3 ~c~~K~sWpELVG~~~~~A~~~I~~d~p~v~v~vl~~g~~vT~Dfr~~RV~V~vD~~g~V~~vP~vG 69 (69)
T 1mit_A 3 SCPGKSSWPHLVGVGGSVAKAIIERQNPNVKAVILEEGTPVTKDFRCNRVRIWVNKRGLVVSPPRIG 69 (69)
T ss_dssp CCSSCSCCCCCTTSHHHHHHHHHHHHCTTSEEEEEETTCCCCSSCCTTEEEEEEETTTEEECCSSCC
T ss_pred CCCCcCcCHHHcCccHHHHHHHHHHHCCCCeEEEecCCCccCCCcCCCEEEEEECCCCcEEeCCcCC
Confidence 3999999999999999999999999999999999999999999999999999999999999999998
No 2
>1vbw_A Trypsin inhibitor BGIT; BGTI, protein binding; HET: TLA; 0.93A {Momordica charantia}
Probab=99.97 E-value=5.8e-32 Score=181.49 Aligned_cols=67 Identities=54% Similarity=0.997 Sum_probs=65.7
Q ss_pred CCCCCCCCccccCcchHHHHHHHHHhCCCCeEEEecCCCccCCCCcCCeEEEEECCCCCEEecCcCC
Q 033055 62 DCPRKSSWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVTRDYRIDRVRVWVNKKGKVIRVPRIG 128 (128)
Q Consensus 62 ~C~gK~sWPELVG~~a~~A~~~I~~erP~v~vrVL~pGs~VTmDfr~dRVnV~VD~~g~VvrVP~VG 128 (128)
+|++|++||||||+++++|+.+|++|||++++|++++|+++||||||||||||+|++|+|+++|+||
T Consensus 2 ~c~~K~sWpELVG~~~~~A~~~I~~d~p~~~v~vl~~g~~vT~Df~~~RV~v~vD~~g~V~~vP~vG 68 (68)
T 1vbw_A 2 RCQGKSSWPQLVGSTGAAAKAVIERENPRVRAVIIKVGSGATKDFRCDRVRVWVTERGIVARPPTIG 68 (68)
T ss_dssp CSCSCCBCGGGTTSBHHHHHHHHHHHCTTCEEEEEETTSCCCCSCCTTEEEEEECTTSBBCSCCEEC
T ss_pred CCCCCCcCHHHCCcCHHHHHHHHHHHCCCCeEEEecCCCccCCCcCCCEEEEEECCCCcEEecCcCC
Confidence 3999999999999999999999999999999999999999999999999999999999999999998
No 3
>1dwm_A LUTI, linum usitatissinum trypsin inhibitor; serine proteinase inhibitor; NMR {Linum usitatissimum} SCOP: d.40.1.1
Probab=99.97 E-value=3.2e-31 Score=178.20 Aligned_cols=67 Identities=58% Similarity=0.958 Sum_probs=65.6
Q ss_pred CCCCCCCCccccCcchHHHHHHHHHhCCCCeEEEecCCCccCCCCcCCeEEEEECCCCCEEecCcCC
Q 033055 62 DCPRKSSWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVTRDYRIDRVRVWVNKKGKVIRVPRIG 128 (128)
Q Consensus 62 ~C~gK~sWPELVG~~a~~A~~~I~~erP~v~vrVL~pGs~VTmDfr~dRVnV~VD~~g~VvrVP~VG 128 (128)
.|++|++||||||+++++|+.+|++|+|++++|||+||+++|||||||||||++|++|+|+++|+||
T Consensus 4 ~c~~k~sWpelVG~~~~~A~~~i~~e~p~~~vrvl~pg~~vT~Dfr~~RV~v~vD~~g~V~~vP~ig 70 (70)
T 1dwm_A 4 RCPGKNAWPELVGKSGNMAAATVERENRNVHAIVLKEGSAMTKDFRCDRVWVIVNDHGVVTSVPHIT 70 (70)
T ss_dssp CCSSCSBCGGGTTSBHHHHHHHHHHHCTTCEEEEEETTCCCCCSCCTTEEEEEECTTSBBCSCCBBC
T ss_pred cCCChhHhHHHcCCcHHHHHHHHHHhCCCceEEEecCCCccCCccCCCeEEEEECCCCeEEeCCcCC
Confidence 3999999999999999999999999999999999999999999999999999999999999999998
No 4
>1to2_I Chymotrypsin inhibitor 2; serine protease, hydrolase; HET: CIT 15P; 1.30A {Hordeum vulgare subsp} SCOP: d.40.1.1 PDB: 1tm3_I* 1tm5_I* 1tm1_I* 1tm7_I* 1tm4_I* 1y4a_I* 1y4d_I 1tmg_I* 1lw6_I 1y3b_I* 1y1k_I* 1y34_I* 1y48_I* 1y3d_I* 1y3c_I* 1y33_I* 1to1_I* 1y3f_I* 3ci2_A 1coa_I ...
Probab=99.96 E-value=1.4e-30 Score=172.94 Aligned_cols=63 Identities=49% Similarity=0.883 Sum_probs=62.2
Q ss_pred CCCCccccCcchHHHHHHHHHhCCCCeEEEecCCCccCCCCcCCeEEEEECCCCCEEecCcCC
Q 033055 66 KSSWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVTRDYRIDRVRVWVNKKGKVIRVPRIG 128 (128)
Q Consensus 66 K~sWPELVG~~a~~A~~~I~~erP~v~vrVL~pGs~VTmDfr~dRVnV~VD~~g~VvrVP~VG 128 (128)
|++||||||+++++|+.+|++|||++.+|++++|+++||||||||||||+|++|+|+++|+||
T Consensus 2 k~sWPELVG~~~~~A~~~I~~d~p~v~v~vl~~g~~vT~Df~~~RV~v~vD~~g~V~~vP~iG 64 (64)
T 1to2_I 2 KTEWPELVGKSVEEAKKVILQDKPAAQIIVLPVGTIVTKEYRIDRVRLFVDRLDNIAQVPRVG 64 (64)
T ss_dssp CCBCGGGTTSBHHHHHHHHHHHCTTCEEEEEETTCEEECBCCTTEEEEEECTTSBBCSCCEEC
T ss_pred CcCCHhhCCCcHHHHHHHHHHHCCCCeEEEecCCCccCCCcCCCEEEEEECCCCeEEecCcCC
Confidence 899999999999999999999999999999999999999999999999999999999999998
No 5
>3rdy_A BWI-1=protease inhibitor/trypsin inhibitor; serine protease inhibitor, potato inhibitor I, trypsin inhib trypsin, hydrolase inhibitor; 1.84A {Fagopyrum esculentum} SCOP: d.40.1.0 PDB: 3rdz_C
Probab=99.96 E-value=4.5e-30 Score=178.06 Aligned_cols=66 Identities=53% Similarity=0.875 Sum_probs=64.5
Q ss_pred CCCCCCCCccccCcchHHHHHHHHHhCCCCeEEEecCCCccCCCCcCCeEEEEECCCCCEEecCcC
Q 033055 62 DCPRKSSWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVTRDYRIDRVRVWVNKKGKVIRVPRI 127 (128)
Q Consensus 62 ~C~gK~sWPELVG~~a~~A~~~I~~erP~v~vrVL~pGs~VTmDfr~dRVnV~VD~~g~VvrVP~V 127 (128)
+|++|++||||||+++++|+++|++|||+++++|+++|+++||||||||||||+|++|+|+++|+|
T Consensus 13 ~~~~K~sWPELVG~~~~~A~~~I~~e~P~v~v~Vl~~Gs~VT~Dfr~~RVrV~VD~~g~V~~~P~i 78 (79)
T 3rdy_A 13 QCSGKQEWPELVGERGSKAAKIIENENEDVRAIVLPEGSAVPRDLRCDRVWVFVDERGVVVDTPVV 78 (79)
T ss_dssp CCCSCCBCGGGTTSBHHHHHHHHHHHCTTCEEEEEETTCCCCSCCCSSEEEEEECTTSBBCSCCBB
T ss_pred cCCCCCcChHHCCcCHHHHHHHHHHHCCCCceEEeCCCCccCCccCCCEEEEEECCCCeEEeCcee
Confidence 488999999999999999999999999999999999999999999999999999999999999997
No 6
>2ci2_I Chymotrypsin inhibitor 2; proteinase inhibitor (chymotrypsin); 2.00A {Hordeum vulgare} SCOP: d.40.1.1 PDB: 2sni_I
Probab=99.96 E-value=4e-30 Score=178.73 Aligned_cols=66 Identities=48% Similarity=0.778 Sum_probs=63.9
Q ss_pred CCCCCCCccccCcchHHHHHHHHHhCCCCeEEEecCCCccCCCCcCCeEEEEECCCCCEEecCcCC
Q 033055 63 CPRKSSWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVTRDYRIDRVRVWVNKKGKVIRVPRIG 128 (128)
Q Consensus 63 C~gK~sWPELVG~~a~~A~~~I~~erP~v~vrVL~pGs~VTmDfr~dRVnV~VD~~g~VvrVP~VG 128 (128)
|++|++||||||+++++|+.+|++|||++++|||++|++|||||||||||||+|++|+|+++|+||
T Consensus 18 ~~~K~sWPELVG~~~~~A~~~I~~d~p~v~vrVl~~G~~VT~Dfr~dRV~V~vD~~g~V~~vP~vG 83 (83)
T 2ci2_I 18 HNLKTEWPELVGKSVEEAKKVILQDKPEAQIIVLPVGTIVTMEYRIDRVRLFVDKLDNIAEVPRVG 83 (83)
T ss_dssp -CCCCBCGGGTTSBHHHHHHHHHHHCTTCEEEEEETTCCCCSCCCTTEEEEEECTTSBBCSCCEEC
T ss_pred CCChhhhHHHcCCcHHHHHHHHHhhCCCCeEEEecCCCccCCCcCCCEEEEEECCCCcEEeCCcCC
Confidence 668999999999999999999999999999999999999999999999999999999999999998
No 7
>1cse_I Eglin C; complex(serine proteinase-inhibitor); 1.20A {Hirudo medicinalis} SCOP: d.40.1.1 PDB: 2sec_I 2tec_I 1egl_A 1tec_I 1acb_I 3tec_I 1sib_I 1sbn_I 1mee_I 1egp_A 1egp_B
Probab=99.96 E-value=6.1e-30 Score=172.64 Aligned_cols=64 Identities=39% Similarity=0.578 Sum_probs=61.3
Q ss_pred CCCCCccccCcchHHHHHHHHHhCCCCeEEEecCCCccCCCCcCCeEEEEEC-CCCCEEecCcCC
Q 033055 65 RKSSWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVTRDYRIDRVRVWVN-KKGKVIRVPRIG 128 (128)
Q Consensus 65 gK~sWPELVG~~a~~A~~~I~~erP~v~vrVL~pGs~VTmDfr~dRVnV~VD-~~g~VvrVP~VG 128 (128)
+|++||||||+++++|+.+|++|||++++||+++|+++||||||||||||+| ++|+|+++|+||
T Consensus 6 ~k~sWPELVG~~~~~A~~~I~~d~p~~~v~vl~~g~~vT~Df~~~RV~V~vD~~~g~V~~vP~iG 70 (70)
T 1cse_I 6 ELKSFPEVVGKTVDQAREYFTLHYPQYNVYFLPEGSPVTLDLRYNRVRVFYNPGTNVVNHVPHVG 70 (70)
T ss_dssp --CBCGGGTTSBHHHHHHHHHHHCTTSEEEEEETTCCEECCCCTTEEEEEEETTTTEECSCCEEC
T ss_pred CCCcCHHHcCccHHHHHHHHHHHCCCCeEEEecCCCccCCccCCCeEEEEEcCCCCEEEeCCcCC
Confidence 5899999999999999999999999999999999999999999999999999 999999999998
No 8
>1cq4_A Protein (serine proteinase inhibitor 2); serine protease inhibitor, polyglutamine insertion mutant, subtilisin- chymotrypsin inhibitor-2; 1.80A {Hordeum vulgare} SCOP: d.40.1.1
Probab=99.85 E-value=4.2e-22 Score=125.71 Aligned_cols=46 Identities=41% Similarity=0.582 Sum_probs=36.5
Q ss_pred CCCCccccCcchHHHHHHHHHhCCCCeEEEecCCCccCCCCcCCeE
Q 033055 66 KSSWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVTRDYRIDRV 111 (128)
Q Consensus 66 K~sWPELVG~~a~~A~~~I~~erP~v~vrVL~pGs~VTmDfr~dRV 111 (128)
|++||||||+++++|+++|++|||+++++|+++|++|||||||||+
T Consensus 2 K~sWPELVG~~~~~A~~~I~~e~p~v~v~vl~~gs~vT~Df~~~R~ 47 (47)
T 1cq4_A 2 KTEWPELVGKSVEEAKKVILQDKPEAQIIVLPVGTIVTMGQQQQGM 47 (47)
T ss_dssp CCBCGGGTTSBHHHHHHHHHHHCTTCEEEEEETTCCC---------
T ss_pred CcCChhhcCccHHHHHHHHHHHCCCCEEEEeCCCCCcCcccCCCCC
Confidence 8999999999999999999999999999999999999999999996
No 9
>1hym_A CMTI-V, hydrolyzed cucurbita maxima trypsin inhibitor V; hydrolase (serine proteinase); NMR {Cucurbita maxima} SCOP: d.40.1.1
Probab=99.69 E-value=2.4e-17 Score=103.72 Aligned_cols=42 Identities=67% Similarity=1.138 Sum_probs=41.2
Q ss_pred CCCCCCCccccCcchHHHHHHHHHhCCCCeEEEecCCCccCC
Q 033055 63 CPRKSSWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVTR 104 (128)
Q Consensus 63 C~gK~sWPELVG~~a~~A~~~I~~erP~v~vrVL~pGs~VTm 104 (128)
|++|++||||||+++++|+++|++|||++.+.|+++|++||+
T Consensus 4 c~~K~sWPELVG~~~~~A~~~I~~e~P~v~v~vl~~gs~vT~ 45 (45)
T 1hym_A 4 CPGKSSWPHLVGVGGSVAKAIIERQNPNVKAVILEEGTPVTK 45 (45)
T ss_dssp CCSCSBCCCCTTSCHHHHHHHHHHHCTTCEEEEEECCSCCCC
T ss_pred CCCCCcChhhcCCcHHHHHHHHHHHCCCCeEEEecCCCcCCC
Confidence 999999999999999999999999999999999999999996
No 10
>1hym_B CMTI-V, hydrolyzed cucurbita maxima trypsin inhibitor V; hydrolase (serine proteinase); NMR {Cucurbita maxima} SCOP: d.40.1.1
Probab=99.10 E-value=3.8e-11 Score=67.86 Aligned_cols=24 Identities=63% Similarity=1.258 Sum_probs=23.5
Q ss_pred CCcCCeEEEEECCCCCEEecCcCC
Q 033055 105 DYRIDRVRVWVNKKGKVIRVPRIG 128 (128)
Q Consensus 105 Dfr~dRVnV~VD~~g~VvrVP~VG 128 (128)
||||+||+||+|++|+|+++|+||
T Consensus 1 Df~~~RVrvfvd~~g~V~~~P~iG 24 (26)
T 1hym_B 1 DFRCNRVRIWVNKRGLVVSPPRIG 24 (26)
T ss_dssp CCCTTEEEEEEETTTEEECCSBCC
T ss_pred CCCCCEEEEEECCCCcEEECCccc
Confidence 899999999999999999999998
No 11
>3arc_K Photosystem II reaction center protein K; PSII, membrane-protein complex, transmembrane alpha-helix, E transport, photosynthesis; HET: OEX CLA PHO BCR PL9 SQD LMG UNL LMT HTG DGD LHG HEM; 1.90A {Thermosynechococcus vulcanus} PDB: 1izl_K* 1s5l_K* 2axt_K* 3bz1_K* 3bz2_K* 3kzi_K* 3prq_K* 3prr_K* 3a0b_K* 3a0h_K*
Probab=57.64 E-value=5.3 Score=23.81 Aligned_cols=18 Identities=33% Similarity=0.726 Sum_probs=14.6
Q ss_pred chhHHHHHHHHHHhcCch
Q 033055 5 LPALALFFFLLAFAAKPS 22 (128)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~ 22 (128)
+|..-++||||||..+.+
T Consensus 16 mPiIPv~f~lLafvWQAa 33 (37)
T 3arc_K 16 LPVIPVLFLALAFVWQAA 33 (37)
T ss_dssp GGGHHHHHHHHHHHHHHH
T ss_pred hchHHHHHHHHHHHHHHh
Confidence 677789999999987653
No 12
>3ouv_A Serine/threonine protein kinase; protein-ligand interaction, transferase; 2.00A {Mycobacterium tuberculosis H37RA}
Probab=40.05 E-value=16 Score=22.51 Aligned_cols=21 Identities=19% Similarity=0.330 Sum_probs=17.7
Q ss_pred CCccccCcchHHHHHHHHHhC
Q 033055 68 SWPELVGKNGEVAAAIIEKEN 88 (128)
Q Consensus 68 sWPELVG~~a~~A~~~I~~er 88 (128)
.-|+|+|++..+|+..++...
T Consensus 9 ~VPdv~G~~~~~A~~~L~~~G 29 (71)
T 3ouv_A 9 DIPDVAGQTVDVAQKNMNVYG 29 (71)
T ss_dssp ECCCCTTCBHHHHHHHHHHTT
T ss_pred ECCCcCCCCHHHHHHHHHHCC
Confidence 468999999999998887753
No 13
>2kuf_A PKNB, serine/threonine-protein kinase PKNB; external domain, signaling, STPK, resuscitation, transferase; NMR {Mycobacterium tuberculosis}
Probab=37.32 E-value=47 Score=22.72 Aligned_cols=20 Identities=20% Similarity=0.345 Sum_probs=16.9
Q ss_pred CCccccCcchHHHHHHHHHh
Q 033055 68 SWPELVGKNGEVAAAIIEKE 87 (128)
Q Consensus 68 sWPELVG~~a~~A~~~I~~e 87 (128)
.-|.|+|++..+|...++..
T Consensus 9 ~vPdv~G~~~~~A~~~L~~~ 28 (139)
T 2kuf_A 9 DIPDVAGQTVDVAQKNLNVY 28 (139)
T ss_dssp EECCCCSSBHHHHHHHHHHH
T ss_pred eCCCcCCCCHHHHHHHHHHC
Confidence 46899999999999888754
No 14
>2kud_A PKNB, serine/threonine-protein kinase PKNB; external domain, signaling, STPK, resuscitation, transferase; NMR {Mycobacterium tuberculosis}
Probab=30.20 E-value=64 Score=22.12 Aligned_cols=21 Identities=19% Similarity=0.355 Sum_probs=18.0
Q ss_pred CCCccccCcchHHHHHHHHHh
Q 033055 67 SSWPELVGKNGEVAAAIIEKE 87 (128)
Q Consensus 67 ~sWPELVG~~a~~A~~~I~~e 87 (128)
..-|+|+|++..+|...++..
T Consensus 9 v~vPdv~G~~~~~A~~~L~~~ 29 (140)
T 2kud_A 9 VQVPDVRGQSSADAIATLQNR 29 (140)
T ss_dssp ECCCCCTTSBHHHHHHHHHHH
T ss_pred eECCccCCCCHHHHHHHHHHC
Confidence 357999999999999988775
No 15
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=28.08 E-value=1.1e+02 Score=21.27 Aligned_cols=69 Identities=16% Similarity=0.150 Sum_probs=36.4
Q ss_pred cccccccccccCC-CC-CCCCCccccCcchHHHHHHHHHhCCCCeEEEecCCCccCCCCcCCeEEEEECCCCCEEec
Q 033055 50 VEDGPNLVMSAFD-CP-RKSSWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVTRDYRIDRVRVWVNKKGKVIRV 124 (128)
Q Consensus 50 ~~d~~~~~~~m~~-C~-gK~sWPELVG~~a~~A~~~I~~erP~v~vrVL~pGs~VTmDfr~dRVnV~VD~~g~VvrV 124 (128)
-||.|+-++++.. -+ ....|.-|.|...++.......... ...-.+ ..- .+.-.+..+.+|.+|+|...
T Consensus 79 ~~Dtp~~l~~y~~~~~~~~~~~~~ltg~~~~~~~~~~~~~~~---~~~~~~-~~~--~~~H~~~~~liD~~G~i~~~ 149 (170)
T 4hde_A 79 DLDKPENLKAFIQKFTEDTSNWNLLTGYSLEDITKFSKDNFQ---SLVDKP-ENG--QVIHGTSFYLIDQNGKVMKK 149 (170)
T ss_dssp TTCCHHHHHHHHTTTCSCCTTEEEEBCSCHHHHHHHHHHHHC---CCCBCC-TTS--CCBCCCEEEEECTTSCEEEE
T ss_pred ccccHHHHHHHHHHcCCCCCCceecCcccHHHHHHHHHhccc---ccccCC-CCc--eEEeeeEEEEEcCCCeEEEE
Confidence 4788887766432 11 1246888889776654433332211 111111 111 22333456779999999753
No 16
>2kui_A PKNB, serine/threonine-protein kinase PKNB; external domain, signaling, STPK, resuscitation, transferase; NMR {Mycobacterium tuberculosis}
Probab=23.80 E-value=2.4e+02 Score=21.52 Aligned_cols=57 Identities=18% Similarity=0.214 Sum_probs=35.2
Q ss_pred CCccccCcchHHHHHHHHHhCCCCeEEEe-------cCCCccCCCC-------cCCeEEEEECCCCCEEecCc
Q 033055 68 SWPELVGKNGEVAAAIIEKENPCVHAIVL-------LEGTPVTRDY-------RIDRVRVWVNKKGKVIRVPR 126 (128)
Q Consensus 68 sWPELVG~~a~~A~~~I~~erP~v~vrVL-------~pGs~VTmDf-------r~dRVnV~VD~~g~VvrVP~ 126 (128)
.-|.|+|++..+|...++... ..+.+. +.|..+..+= ...+|+|++...-.-+.+|-
T Consensus 10 ~VP~v~G~~~~~A~~~L~~~g--l~~~~~~~~s~~~~~g~Vi~q~P~~G~~v~~g~~V~l~vs~G~~~v~vPd 80 (275)
T 2kui_A 10 QVPDVRGQSSADAIATLQNRG--FKIRTLQKPDSTIPPDHVIGTDPAANTSVSAGDEITVNVSTGPEQREIPD 80 (275)
T ss_dssp ECCCCTTSCHHHHHHHHHHHT--CEEEEEEEESSSSSCSSCSCCCTTTTSEECSSCEEEEEEEESCCEEECCC
T ss_pred ECCccCCCCHHHHHHHHHHCC--CeeEEeeeeCCCCCCCEEEEecCCCCCCcCCCCEEEEEEecCCcccccCc
Confidence 568999999999999888763 333222 2344443332 23578888875433445663
No 17
>2qn4_A RASI, alpha-amylase/subtilisin inhibitor; amylase inhibitor, alpha- amylase inhibitor, protease inhibitor, serine protease inhibitor; 1.80A {Oryza sativa subsp}
Probab=22.81 E-value=28 Score=26.65 Aligned_cols=39 Identities=28% Similarity=0.408 Sum_probs=15.5
Q ss_pred HHHHHHHHhcCchhhcccCCCc-cCCcccchH---HHhhhhhc
Q 033055 10 LFFFLLAFAAKPSLAARHEPCL-TDGKELGSE---VIVSALKG 48 (128)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~ 48 (128)
++|+|+|++...+..|-.|+=+ +||.+|=+. -|.+|.-+
T Consensus 7 ~~fLl~a~~~~~~~~a~~~pVlD~~G~~l~~G~~YyI~p~~~g 49 (200)
T 2qn4_A 7 PLILLSLLAISFSCSAAPPPVYDTEGHELSADGSYYVLPASPG 49 (200)
T ss_dssp ----------------CCCBCBCTTSCBCBTTSCEEEEESSTT
T ss_pred HHHHHHHHHhccccccCCCceEeCCCCCCcCCCcEEEEeCccC
Confidence 4456666655544446667777 888887666 36666643
No 18
>3ge3_E Toluene-4-monooxygenase system protein D; DIIRON hydroxylase, effector protein, T201A, aromatic hydrocarbons catabolism, FAD, flavoprotein; 1.52A {Pseudomonas mendocina} SCOP: d.137.1.1 PDB: 3dhh_E* 3dhi_E 3ge8_E 3i5j_E 3i63_E 3q14_E 3q2a_E* 3q3m_E* 3q3n_E* 3q3o_E* 1g10_A 1g11_A 2bf2_A 3ri7_E 2bf5_A 2bf3_A* 2bf3_B*
Probab=22.50 E-value=75 Score=22.17 Aligned_cols=25 Identities=20% Similarity=0.044 Sum_probs=18.3
Q ss_pred HHHHHHHhCCCCeEEEecCCCccCC
Q 033055 80 AAAIIEKENPCVHAIVLLEGTPVTR 104 (128)
Q Consensus 80 A~~~I~~erP~v~vrVL~pGs~VTm 104 (128)
..+.|.++||++.++|...+.++-.
T Consensus 27 iVeaI~~DNP~~~v~V~d~pa~vrI 51 (103)
T 3ge3_E 27 VIETAEIDNPGKEITVEDRRAYVRI 51 (103)
T ss_dssp HHHHHHHHCTTSCCEEEECSSEEEE
T ss_pred HHHHHHhHCcCCEEEEeecCCEEEE
Confidence 4578899999998777666655533
No 19
>3py9_A Protein kinase; pasta, muropeptide binding, phosphorylation, membran transferase; 2.20A {Staphylococcus aureus subsp} PDB: 3m9g_A
Probab=21.40 E-value=2.2e+02 Score=22.23 Aligned_cols=21 Identities=29% Similarity=0.493 Sum_probs=17.4
Q ss_pred CCCccccCcchHHHHHHHHHh
Q 033055 67 SSWPELVGKNGEVAAAIIEKE 87 (128)
Q Consensus 67 ~sWPELVG~~a~~A~~~I~~e 87 (128)
..-|+|+|++..+|...++..
T Consensus 7 v~VPdv~G~t~~eA~~~L~~~ 27 (294)
T 3py9_A 7 EETPDVIGKSVKEAEQIFNKN 27 (294)
T ss_dssp -CCCCCTTCCHHHHHHHHHHT
T ss_pred eECCCcCCCCHHHHHHHHHHC
Confidence 357999999999999888765
Done!