BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033056
(128 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P49206|RS261_ARATH 40S ribosomal protein S26-1 OS=Arabidopsis thaliana GN=RPS26A PE=2
SV=2
Length = 131
Score = 204 bits (518), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 97/116 (83%), Positives = 105/116 (90%)
Query: 1 MTFKRRNGGRNKHGRGHVNFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQDACIYD 60
MTFKRRNGGRNKH RGHVN IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQ+A +Y+
Sbjct: 1 MTFKRRNGGRNKHNRGHVNPIRCSNCGKCCPKDKAIKRFIVRNIVEQAAIRDVQEASVYE 60
Query: 61 NYVLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPKRFMRRRDDLPKPGQPGQ 116
Y LPKLYAK QYCVSCAIHSHVVRVRSRT+RR R PP RF RR++D PKPGQPGQ
Sbjct: 61 GYTLPKLYAKTQYCVSCAIHSHVVRVRSRTNRRVRTPPPRFTRRKEDTPKPGQPGQ 116
>sp|Q8LPJ7|RS262_ARATH 40S ribosomal protein S26-2 OS=Arabidopsis thaliana GN=RPS26B PE=2
SV=2
Length = 133
Score = 204 bits (518), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 97/116 (83%), Positives = 105/116 (90%)
Query: 1 MTFKRRNGGRNKHGRGHVNFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQDACIYD 60
MTFKRRNGGRNKH RGHVN IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQ+A +Y+
Sbjct: 1 MTFKRRNGGRNKHNRGHVNPIRCSNCGKCCPKDKAIKRFIVRNIVEQAAIRDVQEASVYE 60
Query: 61 NYVLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPKRFMRRRDDLPKPGQPGQ 116
Y LPKLYAK QYCVSCAIHSHVVRVRSRT+RR R PP RF RR++D PKPGQPGQ
Sbjct: 61 GYTLPKLYAKTQYCVSCAIHSHVVRVRSRTNRRVRTPPPRFARRKEDTPKPGQPGQ 116
>sp|Q9LYK9|RS263_ARATH 40S ribosomal protein S26-3 OS=Arabidopsis thaliana GN=RPS26C PE=2
SV=1
Length = 130
Score = 200 bits (508), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 95/116 (81%), Positives = 103/116 (88%)
Query: 1 MTFKRRNGGRNKHGRGHVNFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQDACIYD 60
MTFKRRNGGRNKH RGHV IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQ+A +Y+
Sbjct: 1 MTFKRRNGGRNKHNRGHVKPIRCSNCGKCCPKDKAIKRFIVRNIVEQAAIRDVQEASVYE 60
Query: 61 NYVLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPKRFMRRRDDLPKPGQPGQ 116
Y LPKLYAK QYCVSCAIHSHVVRVRSRT+RR R PP RF RR++D PKP QPGQ
Sbjct: 61 GYTLPKLYAKTQYCVSCAIHSHVVRVRSRTNRRVRTPPPRFARRKEDTPKPAQPGQ 116
>sp|P49216|RS26_ORYSJ 40S ribosomal protein S26 OS=Oryza sativa subsp. japonica
GN=RPS26 PE=2 SV=2
Length = 133
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 72/86 (83%), Positives = 81/86 (94%)
Query: 1 MTFKRRNGGRNKHGRGHVNFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQDACIYD 60
MTFKRRNGGRNKHGRGHV +IRCSNC KCCPKDKAIKRF VRNIVEQAA+RDVQ+AC++D
Sbjct: 1 MTFKRRNGGRNKHGRGHVKYIRCSNCAKCCPKDKAIKRFQVRNIVEQAAIRDVQEACVHD 60
Query: 61 NYVLPKLYAKMQYCVSCAIHSHVVRV 86
YVLPKLYAK+ +CVSCAIH+H+VRV
Sbjct: 61 GYVLPKLYAKVHHCVSCAIHAHIVRV 86
>sp|P27085|RS26_OCTVU 40S ribosomal protein S26 OS=Octopus vulgaris GN=RPS26 PE=2 SV=1
Length = 127
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 74/117 (63%), Positives = 90/117 (76%)
Query: 1 MTFKRRNGGRNKHGRGHVNFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQDACIYD 60
MT KRRN GR K GRGHV +IRC+NC +C PKDKAIK+F++RNIVE AAVRD+ DA +Y+
Sbjct: 1 MTSKRRNNGRGKKGRGHVKYIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISDASVYE 60
Query: 61 NYVLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPKRFMRRRDDLPKPGQPGQA 117
Y LPKLYAK+ YCVSCAIHS +VR RSR R++R PP RF R + + +PGQA
Sbjct: 61 VYALPKLYAKLLYCVSCAIHSKIVRNRSREARKDRTPPIRFRPMRGEGGQNARPGQA 117
>sp|O93931|RS26_SCHCO 40S ribosomal protein S26 OS=Schizophyllum commune GN=RPS26 PE=2
SV=1
Length = 126
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 73/101 (72%), Positives = 81/101 (80%)
Query: 1 MTFKRRNGGRNKHGRGHVNFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQDACIYD 60
MT KRRNGGRNK GRGHV F+RCSNC +C KDKAIKRF VRN+VE AA+RD+ DA +Y
Sbjct: 1 MTKKRRNGGRNKSGRGHVTFVRCSNCSRCVAKDKAIKRFTVRNMVESAAIRDISDASVYP 60
Query: 61 NYVLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPKRF 101
Y +PKLY K+ YCVSCAIHSHVVRVRSR RRNR PP R
Sbjct: 61 EYAIPKLYIKIAYCVSCAIHSHVVRVRSREGRRNRAPPPRV 101
>sp|O45499|RS26_CAEEL 40S ribosomal protein S26 OS=Caenorhabditis elegans GN=rps-26 PE=3
SV=1
Length = 117
Score = 152 bits (384), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 73/101 (72%), Positives = 82/101 (81%)
Query: 1 MTFKRRNGGRNKHGRGHVNFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQDACIYD 60
MTFKRRN GRNK RGHV FIRC+NCG+CCPKDKAIK+F+VRNIVE AAVRD+ DA Y
Sbjct: 1 MTFKRRNHGRNKKNRGHVAFIRCTNCGRCCPKDKAIKKFVVRNIVEAAAVRDIGDASAYT 60
Query: 61 NYVLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPKRF 101
Y LPKLY K+ YC++CAIHS VVR RSR RR+R PP RF
Sbjct: 61 QYALPKLYHKLHYCIACAIHSKVVRNRSREARRDRNPPPRF 101
>sp|P13008|RS26_DROME 40S ribosomal protein S26 OS=Drosophila melanogaster GN=RpS26 PE=1
SV=1
Length = 114
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 72/100 (72%), Positives = 83/100 (83%)
Query: 1 MTFKRRNGGRNKHGRGHVNFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQDACIYD 60
MT KRRNGGRNKH RGHV +RC+NC +C PKDKAIK+F++RNIVE AAVRD+ +A I+D
Sbjct: 1 MTKKRRNGGRNKHNRGHVKPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASIWD 60
Query: 61 NYVLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPKR 100
+YVLPKLYAK+ YCVSCAIHS VVR RSR RR R PP R
Sbjct: 61 SYVLPKLYAKLHYCVSCAIHSKVVRNRSREARRIRTPPLR 100
>sp|Q9GT45|RS26_ANOGA 40S ribosomal protein S26 OS=Anopheles gambiae GN=RpS26 PE=3 SV=2
Length = 115
Score = 148 bits (374), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 70/100 (70%), Positives = 82/100 (82%)
Query: 1 MTFKRRNGGRNKHGRGHVNFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQDACIYD 60
MT KRRNGGR KH RGHV +RC+NC +C PKDKAIK+F++RNIVE AAVRD+ DA +Y
Sbjct: 1 MTKKRRNGGRCKHNRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISDASVYS 60
Query: 61 NYVLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPKR 100
+YVLPKLYAK+ YCVSCAIHS VVR RS+ RR R PP+R
Sbjct: 61 SYVLPKLYAKLHYCVSCAIHSKVVRNRSKETRRIRTPPQR 100
>sp|Q9UTG4|RS26B_SCHPO 40S ribosomal protein S26-B OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=rps26b PE=3 SV=1
Length = 119
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 70/106 (66%), Positives = 81/106 (76%)
Query: 1 MTFKRRNGGRNKHGRGHVNFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQDACIYD 60
MT KRRN GRNKHGRGHV F+RC NC + PKDKAIKR+ +RN+VE AA+RD+ +A +Y
Sbjct: 1 MTQKRRNNGRNKHGRGHVKFVRCINCSRAVPKDKAIKRWTIRNMVETAAIRDLSEASVYS 60
Query: 61 NYVLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPKRFMRRRD 106
Y +PKLY K+QYCVSCAIHS VVRVRSR RR R PP R RD
Sbjct: 61 EYTIPKLYIKLQYCVSCAIHSRVVRVRSREGRRIRTPPPRVRYNRD 106
>sp|P62856|RS26_RAT 40S ribosomal protein S26 OS=Rattus norvegicus GN=Rps26 PE=3 SV=3
Length = 115
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 69/101 (68%), Positives = 81/101 (80%)
Query: 1 MTFKRRNGGRNKHGRGHVNFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQDACIYD 60
MT KRRN GR K GRGHV IRC+NC +C PKDKAIK+F++RNIVE AAVRD+ +A ++D
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFD 60
Query: 61 NYVLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPKRF 101
YVLPKLY K+ YCVSCAIHS VVR RSR R++R PP RF
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPPPRF 101
>sp|P49171|RS26_PIG 40S ribosomal protein S26 OS=Sus scrofa GN=RPS26 PE=3 SV=4
Length = 115
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 69/101 (68%), Positives = 81/101 (80%)
Query: 1 MTFKRRNGGRNKHGRGHVNFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQDACIYD 60
MT KRRN GR K GRGHV IRC+NC +C PKDKAIK+F++RNIVE AAVRD+ +A ++D
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFD 60
Query: 61 NYVLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPKRF 101
YVLPKLY K+ YCVSCAIHS VVR RSR R++R PP RF
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPPPRF 101
>sp|P62855|RS26_MOUSE 40S ribosomal protein S26 OS=Mus musculus GN=Rps26 PE=2 SV=3
Length = 115
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 69/101 (68%), Positives = 81/101 (80%)
Query: 1 MTFKRRNGGRNKHGRGHVNFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQDACIYD 60
MT KRRN GR K GRGHV IRC+NC +C PKDKAIK+F++RNIVE AAVRD+ +A ++D
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFD 60
Query: 61 NYVLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPKRF 101
YVLPKLY K+ YCVSCAIHS VVR RSR R++R PP RF
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPPPRF 101
>sp|P61251|RS26_MACFA 40S ribosomal protein S26 OS=Macaca fascicularis GN=RPS26 PE=3 SV=3
Length = 115
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 69/101 (68%), Positives = 81/101 (80%)
Query: 1 MTFKRRNGGRNKHGRGHVNFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQDACIYD 60
MT KRRN GR K GRGHV IRC+NC +C PKDKAIK+F++RNIVE AAVRD+ +A ++D
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFD 60
Query: 61 NYVLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPKRF 101
YVLPKLY K+ YCVSCAIHS VVR RSR R++R PP RF
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPPPRF 101
>sp|P62854|RS26_HUMAN 40S ribosomal protein S26 OS=Homo sapiens GN=RPS26 PE=1 SV=3
Length = 115
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 69/101 (68%), Positives = 81/101 (80%)
Query: 1 MTFKRRNGGRNKHGRGHVNFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQDACIYD 60
MT KRRN GR K GRGHV IRC+NC +C PKDKAIK+F++RNIVE AAVRD+ +A ++D
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFD 60
Query: 61 NYVLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPKRF 101
YVLPKLY K+ YCVSCAIHS VVR RSR R++R PP RF
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPPPRF 101
>sp|Q56JV1|RS26_BOVIN 40S ribosomal protein S26 OS=Bos taurus GN=RPS26 PE=3 SV=3
Length = 115
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 69/101 (68%), Positives = 81/101 (80%)
Query: 1 MTFKRRNGGRNKHGRGHVNFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQDACIYD 60
MT KRRN GR K GRGHV IRC+NC +C PKDKAIK+F++RNIVE AAVRD+ +A ++D
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFD 60
Query: 61 NYVLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPKRF 101
YVLPKLY K+ YCVSCAIHS VVR RSR R++R PP RF
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPPPRF 101
>sp|P21772|RS26_NEUCR 40S ribosomal protein S26E OS=Neurospora crassa (strain ATCC 24698
/ 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=rps-26 PE=3 SV=2
Length = 119
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 71/121 (58%), Positives = 85/121 (70%), Gaps = 2/121 (1%)
Query: 1 MTFKRRNGGRNKHGRGHVNFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQDACIYD 60
M KR+N GRNK GRGHV IRCSNC +C PKDKAIKRF +RN+VE AA+RD+ DA ++
Sbjct: 1 MVKKRKNNGRNKKGRGHVKPIRCSNCSRCTPKDKAIKRFTIRNMVESAAIRDISDASVFA 60
Query: 61 NYVLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPKRFMRRRDDLPKPGQPGQAPRP 120
Y +PK+Y K+QYCVSCAIH +VRVRSR RRNR PP R +D K P Q +
Sbjct: 61 EYTVPKMYLKLQYCVSCAIHGKIVRVRSREGRRNRAPPPRVRYNKDG--KKVTPTQGAKT 118
Query: 121 A 121
A
Sbjct: 119 A 119
>sp|Q6Q312|RS26_SHEEP 40S ribosomal protein S26 OS=Ovis aries GN=RPS26 PE=3 SV=3
Length = 115
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 69/101 (68%), Positives = 81/101 (80%)
Query: 1 MTFKRRNGGRNKHGRGHVNFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQDACIYD 60
MT KRRN GR K GRGHV IRC+NC +C PKDKAIK+F++RNIVE AAVRD+ +A ++D
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEAGVFD 60
Query: 61 NYVLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPKRF 101
YVLPKLY K+ YCVSCAIHS VVR RSR R++R PP RF
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPPPRF 101
>sp|P30742|RS26_CRICR 40S ribosomal protein S26 OS=Cricetus cricetus GN=RPS26 PE=3 SV=3
Length = 115
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 68/101 (67%), Positives = 81/101 (80%)
Query: 1 MTFKRRNGGRNKHGRGHVNFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQDACIYD 60
MT KRRN GR K GRGHV IRC+NC +C PKDKAIK+F++RNIVE AAVRD+ +A ++D
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFD 60
Query: 61 NYVLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPKRF 101
YVLPKLY ++ YCVSCAIHS VVR RSR R++R PP RF
Sbjct: 61 AYVLPKLYVELHYCVSCAIHSKVVRNRSREARKDRTPPPRF 101
>sp|Q9UT56|RS26A_SCHPO 40S ribosomal protein S26-A OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=rps26a PE=3 SV=1
Length = 120
Score = 142 bits (358), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 67/106 (63%), Positives = 80/106 (75%)
Query: 1 MTFKRRNGGRNKHGRGHVNFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQDACIYD 60
MT KRRN GRNKHGRGH F+RC NC + PKDKAIKR+ +RN+VE AA+RD+ +A +Y
Sbjct: 1 MTQKRRNCGRNKHGRGHTKFVRCINCSRAVPKDKAIKRWNIRNMVETAAIRDLSEASVYS 60
Query: 61 NYVLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPKRFMRRRD 106
Y +PK+Y K+QYCVSCAIH+ VVRVRSR RR R PP R RD
Sbjct: 61 EYAIPKIYVKLQYCVSCAIHARVVRVRSREGRRIRTPPPRVRYNRD 106
>sp|P39939|RS26B_YEAST 40S ribosomal protein S26-B OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPS26B PE=1 SV=1
Length = 119
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 67/116 (57%), Positives = 80/116 (68%)
Query: 1 MTFKRRNGGRNKHGRGHVNFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQDACIYD 60
M KR + GRNK GRGHV +RC NC K PKDKAIKR +RNIVE AAVRD+ +A +Y
Sbjct: 1 MPKKRASNGRNKKGRGHVKPVRCVNCSKSIPKDKAIKRMAIRNIVEAAAVRDLSEASVYP 60
Query: 61 NYVLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPKRFMRRRDDLPKPGQPGQ 116
Y LPK Y K+ YCVSCAIH+ +VRVRSR DR+NR PP+R RD+ P +
Sbjct: 61 EYALPKTYNKLHYCVSCAIHARIVRVRSREDRKNRAPPQRPRFNRDNKVSPAAAAK 116
>sp|P39938|RS26A_YEAST 40S ribosomal protein S26-A OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPS26A PE=1 SV=1
Length = 119
Score = 135 bits (339), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 66/116 (56%), Positives = 80/116 (68%)
Query: 1 MTFKRRNGGRNKHGRGHVNFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQDACIYD 60
M KR + GRNK GRGHV +RC NC K PKDKAIKR +RNIVE AAVRD+ +A +Y
Sbjct: 1 MPKKRASNGRNKKGRGHVKPVRCVNCSKSIPKDKAIKRMAIRNIVEAAAVRDLSEASVYP 60
Query: 61 NYVLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPKRFMRRRDDLPKPGQPGQ 116
Y LPK Y K+ YCVSCAIH+ +VRVRSR DR+NR PP+R R++ P +
Sbjct: 61 EYALPKTYNKLHYCVSCAIHARIVRVRSREDRKNRAPPQRPRFNRENKVSPADAAK 116
>sp|Q5JNZ5|RS26L_HUMAN Putative 40S ribosomal protein S26-like 1 OS=Homo sapiens
GN=RPS26P11 PE=5 SV=1
Length = 115
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 64/101 (63%), Positives = 76/101 (75%)
Query: 1 MTFKRRNGGRNKHGRGHVNFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQDACIYD 60
MT KRRN K GRGHV IRC+NC +C P DKAIK+F++RNIVE AAVRD+ + ++D
Sbjct: 1 MTKKRRNNSHAKKGRGHVQPIRCTNCVRCVPTDKAIKKFVIRNIVEAAAVRDISEVSVFD 60
Query: 61 NYVLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPKRF 101
YVLPKLY K+ YCVSCAIHS VVR RSR ++R PP RF
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKVVRNRSREACKDRTPPPRF 101
>sp|Q54TL8|RS26_DICDI 40S ribosomal protein S26 OS=Dictyostelium discoideum GN=rps26 PE=3
SV=1
Length = 112
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 61/102 (59%), Positives = 76/102 (74%), Gaps = 2/102 (1%)
Query: 1 MTFKRRNGGRNKHGRGHVNFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQDACIYD 60
MT KRRN GR+KHGRG V +IRC+NC +C PKDKA+KRF +R IVE AAV+D+ D +++
Sbjct: 1 MTQKRRNHGRSKHGRGSVPYIRCTNCARCVPKDKAVKRFYIRPIVENAAVKDISDQGVFN 60
Query: 61 --NYVLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPKR 100
Y P+ Y K QYC+SCAIHSH+VRVRS DR+ R P R
Sbjct: 61 VKGYKFPRTYVKSQYCISCAIHSHIVRVRSVADRKIRTRPSR 102
>sp|P41959|RS26_BRUPA 40S ribosomal protein S26 (Fragment) OS=Brugia pahangi PE=3 SV=1
Length = 83
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 61/83 (73%), Positives = 68/83 (81%)
Query: 1 MTFKRRNGGRNKHGRGHVNFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQDACIYD 60
MT KRRN GRNK GRGHV IRC+NCG+C PKDKAIK+F+VRNIV AAVRD+ DA YD
Sbjct: 1 MTTKRRNHGRNKKGRGHVRPIRCTNCGRCAPKDKAIKKFVVRNIVVAAAVRDISDASAYD 60
Query: 61 NYVLPKLYAKMQYCVSCAIHSHV 83
+Y LPKLY K+ YCVSCAIHS V
Sbjct: 61 SYALPKLYHKLHYCVSCAIHSKV 83
>sp|Q9BHU1|RS26_OXYNO 40S ribosomal protein S26 OS=Oxytricha nova GN=RPS26 PE=3 SV=1
Length = 125
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/127 (46%), Positives = 80/127 (62%), Gaps = 6/127 (4%)
Query: 1 MTFKRRNGGRNKHGRGHVNFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQDACIY- 59
M KRRN GRNK +GH + +RC+NCG+ KDKAIKRF RN+V+ ++ RD+Q+ Y
Sbjct: 1 MPSKRRNNGRNKKNKGHADTVRCTNCGRVVSKDKAIKRFQQRNMVDASSKRDIQENYAYA 60
Query: 60 -DNYVLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPKRFMRRRDDLPKPGQPGQAP 118
++ +PK+Y K+ YCVSCAIH+ +VRVRS DRR+R K R + Q G A
Sbjct: 61 QSDFTMPKIYVKLSYCVSCAIHARIVRVRSVEDRRHRYTTK----LRQHVRPEAQTGNAS 116
Query: 119 RPAIGVP 125
P +P
Sbjct: 117 LPLALLP 123
>sp|Q8SRN2|RS26_ENCCU 40S ribosomal protein S26 OS=Encephalitozoon cuniculi (strain
GB-M1) GN=RPS26 PE=1 SV=1
Length = 105
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 62/91 (68%)
Query: 5 RRNGGRNKHGRGHVNFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQDACIYDNYVL 64
RRN GR K RG I+C CG PKDKAIKRF +++++EQA+ D++ A IYD + +
Sbjct: 2 RRNHGRGKKNRGSAGSIQCDKCGSVTPKDKAIKRFRIQSLIEQASFDDLKQATIYDVFEV 61
Query: 65 PKLYAKMQYCVSCAIHSHVVRVRSRTDRRNR 95
P++ K Q+CVSCA H+ +VRVRS R+ R
Sbjct: 62 PRMGYKSQFCVSCACHAKIVRVRSSQARKIR 92
>sp|P41692|RS26_MUSVI 40S ribosomal protein S26 (Fragment) OS=Mustela vison GN=RPS26
PE=3 SV=3
Length = 41
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 31/40 (77%)
Query: 1 MTFKRRNGGRNKHGRGHVNFIRCSNCGKCCPKDKAIKRFL 40
MT KRRN GR K GRGHV IRC+N +C PKDKAIK+F+
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNLARCVPKDKAIKKFV 40
>sp|A6W7Z2|IF2_KINRD Translation initiation factor IF-2 OS=Kineococcus radiotolerans
(strain ATCC BAA-149 / DSM 14245 / SRS30216) GN=infB
PE=3 SV=1
Length = 1044
Score = 32.7 bits (73), Expect = 0.74, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Query: 87 RSRTDRRNREPPKRFMRRRDDLPKPGQPGQAPRPAIGVPVRP 128
R R+DR E + + D +PG PG APRP G P RP
Sbjct: 225 RPRSDRPQGERQQGDRPQGDRPGRPGAPGGAPRPGAGAP-RP 265
>sp|A2C5R5|CLPX_PROM3 ATP-dependent Clp protease ATP-binding subunit ClpX
OS=Prochlorococcus marinus (strain MIT 9303) GN=clpX
PE=3 SV=1
Length = 452
Score = 29.3 bits (64), Expect = 8.2, Method: Composition-based stats.
Identities = 12/32 (37%), Positives = 19/32 (59%)
Query: 31 PKDKAIKRFLVRNIVEQAAVRDVQDACIYDNY 62
PK + IK FL + +V Q A + V +Y++Y
Sbjct: 82 PKPQEIKNFLDKQVVGQEAAKKVLSVAVYNHY 113
>sp|Q7V993|CLPX_PROMM ATP-dependent Clp protease ATP-binding subunit ClpX
OS=Prochlorococcus marinus (strain MIT 9313) GN=clpX
PE=3 SV=1
Length = 452
Score = 29.3 bits (64), Expect = 8.4, Method: Composition-based stats.
Identities = 12/32 (37%), Positives = 19/32 (59%)
Query: 31 PKDKAIKRFLVRNIVEQAAVRDVQDACIYDNY 62
PK + IK FL + +V Q A + V +Y++Y
Sbjct: 82 PKPQQIKSFLDKQVVGQEAAKKVLSVAVYNHY 113
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.327 0.141 0.459
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,744,017
Number of Sequences: 539616
Number of extensions: 1960771
Number of successful extensions: 7947
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 7899
Number of HSP's gapped (non-prelim): 60
length of query: 128
length of database: 191,569,459
effective HSP length: 94
effective length of query: 34
effective length of database: 140,845,555
effective search space: 4788748870
effective search space used: 4788748870
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 55 (25.8 bits)