BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033057
(128 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9CRC3|CO040_MOUSE UPF0235 protein C15orf40 homolog OS=Mus musculus PE=2 SV=1
Length = 126
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/119 (44%), Positives = 70/119 (58%), Gaps = 7/119 (5%)
Query: 8 KSKAKSAGSTQSKIKTNDENLPSCIRLV---PPSSVSITIHAKPGSKSCSITDVSDEAVG 64
K+ A S G Q+K E P V P V+I IHAKPGS+ ++TD+S EAVG
Sbjct: 4 KAGATSKGKNQTK---EPETAPPAAGPVATDPKGFVTIAIHAKPGSRQNAVTDLSTEAVG 60
Query: 65 VQIDAPAKDGEANAALLEYMSSVLGVKRRQVSIGSGSKSRDKIV-IVEEITPENVLNSL 122
V I AP +GEANA L Y+S VL +++ V + G KSR+K+V ++ TPE VL L
Sbjct: 61 VAIAAPPSEGEANAELCRYLSKVLDLRKSDVVLDKGGKSREKVVKLLASTTPEEVLEKL 119
>sp|Q505I4|CO040_RAT UPF0235 protein C15orf40 homolog OS=Rattus norvegicus PE=2 SV=1
Length = 126
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/116 (42%), Positives = 67/116 (57%), Gaps = 1/116 (0%)
Query: 8 KSKAKSAGSTQSKIKTNDENLPSCIRLVPPSSVSITIHAKPGSKSCSITDVSDEAVGVQI 67
K+ A S G Q+K + V+I IHAKPGSK ++TD++ EAVGV I
Sbjct: 4 KAGATSKGKNQTKEPETPPPPTGPVATDSKGFVTIAIHAKPGSKQNAVTDLNTEAVGVAI 63
Query: 68 DAPAKDGEANAALLEYMSSVLGVKRRQVSIGSGSKSRDKIV-IVEEITPENVLNSL 122
AP +GEANA L Y+S VL +++ V + G KSR+K+V ++ TPE VL L
Sbjct: 64 AAPPSEGEANAELCRYLSKVLDLRKSDVVLDKGGKSREKVVKLLASTTPEEVLEKL 119
>sp|Q3ZBP8|CO040_BOVIN UPF0235 protein C15orf40 homolog OS=Bos taurus PE=2 SV=1
Length = 126
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/120 (43%), Positives = 70/120 (58%), Gaps = 5/120 (4%)
Query: 8 KSKAKSAGSTQSKIKTNDENLPSC--IRLVPPSSVSITIHAKPGSKSCSITDVSDEAVGV 65
K A + G QSK + LP + + P VSI IHAKPGSK ++TDV+ EAV V
Sbjct: 4 KCGATNKGKNQSK--EPERPLPPLGPVTVDPKGGVSIAIHAKPGSKQNAVTDVTTEAVSV 61
Query: 66 QIDAPAKDGEANAALLEYMSSVLGVKRRQVSIGSGSKSRDKIV-IVEEITPENVLNSLGK 124
I AP +GEANA L Y+S VL +++ V + G KSR+K+V ++ PE +L L K
Sbjct: 62 AIAAPPTEGEANAELCRYLSKVLELRKSDVVLDKGGKSREKVVKLLASTPPEEILEKLKK 121
>sp|Q8WUR7|CO040_HUMAN UPF0235 protein C15orf40 OS=Homo sapiens GN=C15orf40 PE=1 SV=1
Length = 126
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 70/113 (61%), Gaps = 6/113 (5%)
Query: 12 KSAGST---QSKIKTNDENLPSC--IRLVPPSSVSITIHAKPGSKSCSITDVSDEAVGVQ 66
K AG+T +S+ K + LP + + P V+I IHAKPGSK ++TD++ EAV V
Sbjct: 3 KKAGATTKGKSQSKEPERPLPPLGPVAVDPKGCVTIAIHAKPGSKQNAVTDLTAEAVNVA 62
Query: 67 IDAPAKDGEANAALLEYMSSVLGVKRRQVSIGSGSKSRDKIV-IVEEITPENV 118
I AP +GEANA L Y+S VL +++ V + G KSR+K+V ++ TPE +
Sbjct: 63 IAAPPSEGEANAELCRYLSKVLELRKSDVVLDKGGKSREKVVKLLASTTPEEI 115
>sp|C1D6C4|Y3181_LARHH UPF0235 protein LHK_03181 OS=Laribacter hongkongensis (strain
HLHK9) GN=LHK_03181 PE=3 SV=1
Length = 97
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 50/77 (64%)
Query: 40 VSITIHAKPGSKSCSITDVSDEAVGVQIDAPAKDGEANAALLEYMSSVLGVKRRQVSIGS 99
V +T+H +PG++ + + +A+ +++ AP DG+ANA LL +++ LGV R V++ S
Sbjct: 11 VRLTLHVQPGARRTEVAGLHGDALKIRLAAPPVDGKANACLLAFLARGLGVSRSAVTLKS 70
Query: 100 GSKSRDKIVIVEEITPE 116
G SR K+V + ITPE
Sbjct: 71 GDCSRHKVVDIRGITPE 87
>sp|B0TGP1|Y2027_HELMI UPF0235 protein Helmi_20270 OS=Heliobacterium modesticaldum (strain
ATCC 51547 / Ice1) GN=Helmi_20270 PE=3 SV=1
Length = 96
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 50/83 (60%)
Query: 36 PPSSVSITIHAKPGSKSCSITDVSDEAVGVQIDAPAKDGEANAALLEYMSSVLGVKRRQV 95
P S+ I +P + + + D+A+ V++ AP DGEANAA L++++ LG+ R QV
Sbjct: 8 PGGSIRFRIRVQPRASKNEVCGLLDDALKVRLTAPPVDGEANAACLQFIAKTLGLSRSQV 67
Query: 96 SIGSGSKSRDKIVIVEEITPENV 118
+ +G SR K + VE ++ E++
Sbjct: 68 RLVAGETSRLKTLEVEGVSAEDL 90
>sp|Q54UW1|U235_DICDI UPF0235 protein OS=Dictyostelium discoideum GN=DDB_G0280783 PE=3
SV=1
Length = 124
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Query: 40 VSITIHAKPGSKSCSITDVSDEAVGVQIDAPAKDGEANAALLEYMSSVLGVKRRQVSIGS 99
+ I ++ P SK SI D+ + ++I P DG+AN ++E++S L +++ + +G
Sbjct: 32 IKINVNVHPNSKESSIVSFEDQILSLRISEPPIDGKANIGVIEFLSKELNIRKSNIEVGK 91
Query: 100 GSKSRDKIVIVEEITPENV 118
GSKSR+K V + +I+ EN+
Sbjct: 92 GSKSRNKSVEI-DISSENI 109
>sp|A1KB74|Y3464_AZOSB UPF0235 protein azo3464 OS=Azoarcus sp. (strain BH72) GN=azo3464
PE=3 SV=1
Length = 98
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 53/94 (56%), Gaps = 2/94 (2%)
Query: 32 IRLVPPSSVSITIHAKPGSKSCSITDVSDEAVGVQIDAPAKDGEANAALLEYMSSVLGVK 91
+R S+++T+H +PG++ + EA+ +++ AP DG+ANAAL +++ V
Sbjct: 5 VREAADGSLTLTLHIQPGARQTGFAGLHGEAMKIRLAAPPVDGKANAALCAFLADFCEVP 64
Query: 92 RRQVSIGSGSKSRDKIVIVEEITP--ENVLNSLG 123
+ V++ SG SR K V VE TP L +LG
Sbjct: 65 KSAVTLVSGETSRAKRVRVETKTPGLAGRLRALG 98
>sp|Q5P6I2|Y954_AROAE UPF0235 protein AZOSEA09540 OS=Aromatoleum aromaticum (strain EbN1)
GN=AZOSEA09540 PE=3 SV=1
Length = 97
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Query: 31 CIRLVPPSSVSITIHAKPGSKSCSITDVSDEAVGVQIDAPAKDGEANAALLEYMSSVLGV 90
+R S+ +++H +PG+K EA+ +++ AP DG+ANAAL ++++ GV
Sbjct: 3 WLREAADGSLVLSLHVQPGAKKTEFVGPHGEAMKLRLAAPPVDGKANAALTVFLAAFCGV 62
Query: 91 KRRQVSIGSGSKSRDKIVIVEEITPENV--LNSLG 123
R VS+ SG SR K V +E E + L +LG
Sbjct: 63 GRSAVSLLSGETSRAKRVRIEGAGSEALARLRALG 97
>sp|Q478W6|Y3887_DECAR UPF0235 protein Daro_3887 OS=Dechloromonas aromatica (strain RCB)
GN=Daro_3887 PE=3 SV=1
Length = 97
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 46/81 (56%)
Query: 28 LPSCIRLVPPSSVSITIHAKPGSKSCSITDVSDEAVGVQIDAPAKDGEANAALLEYMSSV 87
+ R +++T+H +PG+K + +A+ +++ AP DG+AN AL+ +++
Sbjct: 1 MSDWFRQAANGCITLTLHIQPGAKKSEFAGLHGDALKIRLAAPPVDGKANEALIRFIADA 60
Query: 88 LGVKRRQVSIGSGSKSRDKIV 108
LG+ + V + SG SR K++
Sbjct: 61 LGLAKSAVHLKSGQTSRRKVL 81
>sp|A0LDU6|Y3654_MAGSM UPF0235 protein Mmc1_3654 OS=Magnetococcus sp. (strain MC-1)
GN=Mmc1_3654 PE=3 SV=1
Length = 98
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 46/77 (59%)
Query: 39 SVSITIHAKPGSKSCSITDVSDEAVGVQIDAPAKDGEANAALLEYMSSVLGVKRRQVSIG 98
++ +TI +P + + E + V ++AP DG AN AL +++ LG+ + QV++
Sbjct: 10 TLHLTIRVQPKAAQERVMGWQGEQLKVALNAPPVDGAANKALCHFLAKQLGIAKGQVTLV 69
Query: 99 SGSKSRDKIVIVEEITP 115
G KSR+K ++++ I+P
Sbjct: 70 RGEKSREKQLVIQGISP 86
>sp|Q3A6Y1|Y617_PELCD UPF0235 protein Pcar_0617 OS=Pelobacter carbinolicus (strain DSM
2380 / Gra Bd 1) GN=Pcar_0617 PE=3 SV=1
Length = 95
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 51/83 (61%)
Query: 40 VSITIHAKPGSKSCSITDVSDEAVGVQIDAPAKDGEANAALLEYMSSVLGVKRRQVSIGS 99
V +++H +P + + + E++ +++ +P +G AN E+++ +LGV + +V++ S
Sbjct: 12 VVLSVHVQPRASRNELAGLQGESLKIRLTSPPVEGAANKLCREFLAKLLGVAKSRVTLVS 71
Query: 100 GSKSRDKIVIVEEITPENVLNSL 122
G KSR K +++E +T + V N L
Sbjct: 72 GDKSRHKRLLIEGVTLDEVRNKL 94
>sp|Q1IIU5|Y4205_KORVE UPF0235 protein Acid345_4205 OS=Koribacter versatilis (strain
Ellin345) GN=Acid345_4205 PE=3 SV=1
Length = 96
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 48/85 (56%)
Query: 38 SSVSITIHAKPGSKSCSITDVSDEAVGVQIDAPAKDGEANAALLEYMSSVLGVKRRQVSI 97
S VS + +P +K +I + A+ + + P DG AN AL+ +++ +L V R V+I
Sbjct: 9 SGVSFAVRLQPKAKKTAIIGELNGALKLGVTDPPIDGRANEALIRFVAGLLKVTRSSVTI 68
Query: 98 GSGSKSRDKIVIVEEITPENVLNSL 122
+G SR+K++ +E +T E V L
Sbjct: 69 AAGESSRNKVIRIEGVTAEQVRFRL 93
>sp|O28207|Y2072_ARCFU UPF0235 protein AF_2072 OS=Archaeoglobus fulgidus (strain ATCC
49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=AF_2072 PE=3 SV=1
Length = 78
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 41/70 (58%), Gaps = 5/70 (7%)
Query: 40 VSITIHAKPGSKSCSIT-DVSDEAVGVQIDAPAKDGEANAALLEYMSSVLGVKRRQVSIG 98
V I++H PGSK S + D AV V+I +PAK+G+AN LL + G +V +
Sbjct: 8 VLISVHVSPGSKEVSFSYDEWRRAVEVRIKSPAKEGKANRELLGIFRQIFG----EVELV 63
Query: 99 SGSKSRDKIV 108
SG KSR K++
Sbjct: 64 SGEKSRSKVL 73
>sp|Q7NEP3|Y3835_GLOVI UPF0235 protein glr3835 OS=Gloeobacter violaceus (strain PCC 7421)
GN=glr3835 PE=3 SV=1
Length = 111
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 9/92 (9%)
Query: 35 VPPSSVSI-------TIHAKPGSKSCSITDVSDEAVGVQIDAPAKDGEANAALLEYMSSV 87
PP +VS+ T+ A+P + + A V++ AP +G+ANA + +++
Sbjct: 14 FPPGAVSVDAGGITLTVWAQPRASCSEVVGWQQNAFKVRLAAPPVEGKANAECVALIAAF 73
Query: 88 LGVKRRQVSIGSGSKSRDKIVIVEEITPENVL 119
GV RRQVS+ G + R K + +E P ++L
Sbjct: 74 FGVPRRQVSLVQGQQGRHKKIRIE--APADLL 103
>sp|B8F6W0|Y1504_HAEPS UPF0235 protein HAPS_1504 OS=Haemophilus parasuis serovar 5 (strain
SH0165) GN=HAPS_1504 PE=3 SV=1
Length = 97
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 38/76 (50%)
Query: 37 PSSVSITIHAKPGSKSCSITDVSDEAVGVQIDAPAKDGEANAALLEYMSSVLGVKRRQVS 96
P + + I +P + I + D + + I AP DG+ANA LL+Y+S + V + +
Sbjct: 10 PQGIRLRIFLQPKASRDQIVGLHDNELKIAITAPPIDGQANAHLLKYLSKLFKVPKSSIV 69
Query: 97 IGSGSKSRDKIVIVEE 112
+ G R K + V E
Sbjct: 70 LEKGELQRHKQIFVPE 85
>sp|Q3J6V4|Y3000_NITOC UPF0235 protein Noc_3000 OS=Nitrosococcus oceani (strain ATCC 19707
/ NCIMB 11848) GN=Noc_3000 PE=3 SV=1
Length = 102
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 43/76 (56%)
Query: 39 SVSITIHAKPGSKSCSITDVSDEAVGVQIDAPAKDGEANAALLEYMSSVLGVKRRQVSIG 98
++ I I +P +K + + + ++I AP +G+AN LL +++ V R QV +
Sbjct: 12 ALIIQIRLQPRAKGDEVIGPHGDRLKIRITAPPVEGKANTHLLRFLAKTFQVSRNQVYLL 71
Query: 99 SGSKSRDKIVIVEEIT 114
SG+ SRDK V +E+ T
Sbjct: 72 SGATSRDKRVRIEKPT 87
>sp|B4U5M3|Y1378_HYDS0 UPF0235 protein HY04AAS1_1378 OS=Hydrogenobaculum sp. (strain
Y04AAS1) GN=HY04AAS1_1378 PE=3 SV=1
Length = 73
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 43/67 (64%)
Query: 42 ITIHAKPGSKSCSITDVSDEAVGVQIDAPAKDGEANAALLEYMSSVLGVKRRQVSIGSGS 101
+ + KP +K+ S+ + D+++ + I +P +G+AN L++ +S L V + +++I +G
Sbjct: 3 LRVKVKPNAKTVSVEQLEDKSLKISIKSPPVNGKANEELIKVLSEFLKVSKSKINIKAGK 62
Query: 102 KSRDKIV 108
SR+K+V
Sbjct: 63 SSREKLV 69
>sp|C1DI68|Y305_AZOVD UPF0235 protein Avin_03050 OS=Azotobacter vinelandii (strain DJ /
ATCC BAA-1303) GN=Avin_03050 PE=3 SV=1
Length = 99
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 39/69 (56%)
Query: 42 ITIHAKPGSKSCSITDVSDEAVGVQIDAPAKDGEANAALLEYMSSVLGVKRRQVSIGSGS 101
+ H +P + + E + +++ AP +G+ANA LL +++ V GV + QVS+ SG
Sbjct: 13 LACHLQPKASKDEFAGLHGERLKIRLTAPPVEGKANAHLLAFLAGVFGVPKSQVSLESGE 72
Query: 102 KSRDKIVIV 110
+R K V +
Sbjct: 73 SNRQKRVRI 81
>sp|B0UWD6|Y1819_HAES2 UPF0235 protein HSM_1819 OS=Haemophilus somnus (strain 2336)
GN=HSM_1819 PE=3 SV=1
Length = 99
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%)
Query: 39 SVSITIHAKPGSKSCSITDVSDEAVGVQIDAPAKDGEANAALLEYMSSVLGVKRRQVSIG 98
++ + I +P + + + D A+ + I AP DG+ANA LL+++S V + Q+ +
Sbjct: 10 NLRLRIFLQPKASKDHLIGLYDNALKISITAPPIDGQANAHLLKFLSKTFKVAKSQIILE 69
Query: 99 SGSKSRDKIVIV 110
G SR K +++
Sbjct: 70 KGELSRHKQILI 81
>sp|Q0I525|Y1657_HAES1 UPF0235 protein HS_1657 OS=Haemophilus somnus (strain 129Pt)
GN=HS_1657 PE=3 SV=1
Length = 99
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%)
Query: 39 SVSITIHAKPGSKSCSITDVSDEAVGVQIDAPAKDGEANAALLEYMSSVLGVKRRQVSIG 98
++ + I +P + + + D A+ + I AP DG+ANA LL+++S V + Q+ +
Sbjct: 10 NLRLRIFLQPKASKDHLIGLYDNALKISITAPPIDGQANAHLLKFLSKTFKVAKSQIILE 69
Query: 99 SGSKSRDKIVIV 110
G SR K +++
Sbjct: 70 KGELSRHKQILI 81
>sp|B3EMY7|Y2066_CHLPB UPF0235 protein Cphamn1_2066 OS=Chlorobium phaeobacteroides (strain
BS1) GN=Cphamn1_2066 PE=3 SV=1
Length = 101
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 42/86 (48%), Gaps = 9/86 (10%)
Query: 39 SVSITIHAKPGSKSCSITDVSDEAVGVQIDAPAKDGEANAALLEYMSSVLGVKRRQVSIG 98
SV +I A+P S IT D ++ V + AP DGEAN ++ LGV R V I
Sbjct: 10 SVFFSIKAQPRSSKSMITGEYDGSIKVNLKAPPVDGEANLECCRLLARTLGVARSSVEIV 69
Query: 99 SGSKSRDKIV---------IVEEITP 115
SG++ + K V E+ITP
Sbjct: 70 SGTRGKMKRVKVFGLSAVEFTEKITP 95
>sp|Q0AE64|Y2146_NITEC UPF0235 protein Neut_2146 OS=Nitrosomonas eutropha (strain C91)
GN=Neut_2146 PE=3 SV=1
Length = 99
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 49/87 (56%), Gaps = 2/87 (2%)
Query: 38 SSVSITIHAKPGSKSCSITDVSDEAVGVQIDAPAKDGEANAALLEYMSSVLGVKRRQVSI 97
++ + ++ +PG++ V E + +++ AP DG+AN AL +++ V + +++
Sbjct: 10 HNLILKLYIQPGARQTEAIGVHGEELKIKLAAPPMDGKANRALAVFLAKRFNVPLKHITL 69
Query: 98 GSGSKSRDKIV-IVEEIT-PENVLNSL 122
G++SR K+V I + + PE + N +
Sbjct: 70 KWGAQSRHKVVEIYQPVNGPEVLFNEI 96
>sp|Q7VN15|Y778_HAEDU UPF0235 protein HD_0778 OS=Haemophilus ducreyi (strain 35000HP /
ATCC 700724) GN=HD_0778 PE=3 SV=1
Length = 97
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%)
Query: 37 PSSVSITIHAKPGSKSCSITDVSDEAVGVQIDAPAKDGEANAALLEYMSSVLGVKRRQVS 96
P + + I +P + I + D + V I AP DG ANA LL+Y+S + V + +
Sbjct: 10 PYGIRLRIFLQPKASRDQIVGLHDNELKVAITAPPVDGAANAYLLKYLSKLFKVPKSSIV 69
Query: 97 IGSGSKSRDKIVIV 110
+ G R K + V
Sbjct: 70 LEKGELQRHKQLFV 83
>sp|B3GYF9|Y1431_ACTP7 UPF0235 protein APP7_1431 OS=Actinobacillus pleuropneumoniae
serotype 7 (strain AP76) GN=APP7_1431 PE=3 SV=1
Length = 97
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 37/76 (48%)
Query: 37 PSSVSITIHAKPGSKSCSITDVSDEAVGVQIDAPAKDGEANAALLEYMSSVLGVKRRQVS 96
P + + I +P + I + D + + I AP DG ANA LL+Y+S + V + +
Sbjct: 10 PYGIRLRIFLQPKASRDQIVGLHDSELKIAITAPPVDGAANAHLLKYLSKLFKVPKSSIV 69
Query: 97 IGSGSKSRDKIVIVEE 112
+ G R K + V E
Sbjct: 70 LEKGELQRHKQLFVPE 85
>sp|Q82X93|Y395_NITEU UPF0235 protein NE0395 OS=Nitrosomonas europaea (strain ATCC 19718
/ NBRC 14298) GN=NE0395 PE=3 SV=1
Length = 100
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 42/73 (57%)
Query: 38 SSVSITIHAKPGSKSCSITDVSDEAVGVQIDAPAKDGEANAALLEYMSSVLGVKRRQVSI 97
S + + ++ +PG++ + E + +++ A DG+AN AL E+++ V R+ +++
Sbjct: 11 SLLILKLYVQPGARQTEAVGICGEELKIKLAALPVDGKANRALTEFLAKRFNVPRKNITL 70
Query: 98 GSGSKSRDKIVIV 110
G +SR K+V V
Sbjct: 71 KRGEQSRHKVVEV 83
>sp|A6VQS7|Y1977_ACTSZ UPF0235 protein Asuc_1977 OS=Actinobacillus succinogenes (strain
ATCC 55618 / 130Z) GN=Asuc_1977 PE=3 SV=1
Length = 98
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
Query: 40 VSITIHAKPGSKSCSITDVSDEAVGVQIDAPAKDGEANAALLEYMSSVLGVKRRQVSIGS 99
+ + I +P + +I + DE + + I AP DG ANA L++Y+S V + V +
Sbjct: 11 IRLRIMLQPKASKDAIIGLHDEELKISITAPPVDGAANAHLIKYLSKAFKVPKSAVQLEK 70
Query: 100 GSKSRDKIVIV--EEITPENVLNSL 122
G +R K V + +I PE V L
Sbjct: 71 GELNRHKQVFIPAPKIIPEAVRQLL 95
>sp|B1KIX3|Y1329_SHEWM UPF0235 protein Swoo_1329 OS=Shewanella woodyi (strain ATCC 51908 /
MS32) GN=Swoo_1329 PE=3 SV=1
Length = 95
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 42 ITIHAKPGSKSCSITDVSDEAVGVQIDAPAKDGEANAALLEYMSSVLGVKRRQVSIGSGS 101
+ ++ +P + I V E + + I AP DG+ANA L++Y+S V + ++I G
Sbjct: 13 LNLYIQPKASRDQIVGVHGEELKIAITAPPVDGKANAHLIKYLSKAFKVPKGDINILKGE 72
Query: 102 KSRDKI--VIVEEITPENVLNSL 122
+ R K VI + PEN+ + L
Sbjct: 73 QGRHKQVKVISPRVIPENISSQL 95
>sp|Q052F7|Y1291_LEPBL UPF0235 protein LBL_1291 OS=Leptospira borgpetersenii serovar
Hardjo-bovis (strain L550) GN=LBL_1291 PE=3 SV=1
Length = 73
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Query: 40 VSITIHAKPGSKSCSITDVSDEAVGVQIDAPAKDGEANAALLEYMSSVLGVKRRQVSIGS 99
+ T+ KP SK D +V + + PA +G+AN A++E +S + + +R++ I S
Sbjct: 1 MKFTVRVKPNSKKIFFRKEEDGSVTIAVREPALEGKANEAVIETISREMKIPKRKIRIVS 60
Query: 100 GSKSRDKIVIVEEITP 115
G K + K + EI P
Sbjct: 61 GEKGKKKTI---EIDP 73
>sp|Q04TD1|Y1240_LEPBJ UPF0235 protein LBJ_1240 OS=Leptospira borgpetersenii serovar
Hardjo-bovis (strain JB197) GN=LBJ_1240 PE=3 SV=1
Length = 73
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Query: 40 VSITIHAKPGSKSCSITDVSDEAVGVQIDAPAKDGEANAALLEYMSSVLGVKRRQVSIGS 99
+ T+ KP SK D +V + + PA +G+AN A++E +S + + +R++ I S
Sbjct: 1 MKFTVRVKPNSKKIFFRKEEDGSVTIAVREPALEGKANEAVIETISREMKIPKRKIRIVS 60
Query: 100 GSKSRDKIVIVEEITP 115
G K + K + EI P
Sbjct: 61 GEKGKKKTI---EIDP 73
>sp|Q3K595|Y5322_PSEPF UPF0235 protein Pfl01_5322 OS=Pseudomonas fluorescens (strain
Pf0-1) GN=Pfl01_5322 PE=3 SV=1
Length = 96
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 40/69 (57%)
Query: 42 ITIHAKPGSKSCSITDVSDEAVGVQIDAPAKDGEANAALLEYMSSVLGVKRRQVSIGSGS 101
+ H +P ++S + + + +++ AP +G+ANA L+ +++ GV + QVS+ SG
Sbjct: 13 LECHLQPAARSDDFCGLHGDRLKIRLTAPPVEGKANAYLMGFLAKAFGVSKSQVSLLSGE 72
Query: 102 KSRDKIVIV 110
+R K V +
Sbjct: 73 LNRQKRVRI 81
>sp|B8JFX1|Y1215_ANAD2 UPF0235 protein A2cp1_1215 OS=Anaeromyxobacter dehalogenans (strain
2CP-1 / ATCC BAA-258) GN=A2cp1_1215 PE=3 SV=1
Length = 95
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 37/69 (53%)
Query: 42 ITIHAKPGSKSCSITDVSDEAVGVQIDAPAKDGEANAALLEYMSSVLGVKRRQVSIGSGS 101
+ I +P + D + +Q+ AP DG ANAAL+E++++ LGV+R V + G
Sbjct: 13 LEILVQPRASRTRAVGEHDGRLKIQLAAPPVDGAANAALVEFLAAALGVRRADVELLRGE 72
Query: 102 KSRDKIVIV 110
R K V V
Sbjct: 73 TGRRKTVRV 81
>sp|Q72QP5|Y2068_LEPIC UPF0235 protein LIC_12068 OS=Leptospira interrogans serogroup
Icterohaemorrhagiae serovar copenhageni (strain Fiocruz
L1-130) GN=LIC_12068 PE=3 SV=1
Length = 73
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 39/69 (56%)
Query: 40 VSITIHAKPGSKSCSITDVSDEAVGVQIDAPAKDGEANAALLEYMSSVLGVKRRQVSIGS 99
+ T++ KP SK D + + + PA +G+AN A++E +S + V + ++ I S
Sbjct: 1 MKFTVYVKPNSKKVFFRKEEDGVLTIAVREPALEGKANEAVIESISKEMKVPKSKIRILS 60
Query: 100 GSKSRDKIV 108
G K++ KI+
Sbjct: 61 GQKNKKKII 69
>sp|Q8F5E6|Y1736_LEPIN UPF0235 protein LA_1736 OS=Leptospira interrogans serogroup
Icterohaemorrhagiae serovar Lai (strain 56601)
GN=LA_1736 PE=3 SV=1
Length = 73
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 39/69 (56%)
Query: 40 VSITIHAKPGSKSCSITDVSDEAVGVQIDAPAKDGEANAALLEYMSSVLGVKRRQVSIGS 99
+ T++ KP SK D + + + PA +G+AN A++E +S + V + ++ I S
Sbjct: 1 MKFTVYVKPNSKKVFFRKEEDGVLTIAVREPALEGKANEAVIESISKEMKVPKSKIRILS 60
Query: 100 GSKSRDKIV 108
G K++ KI+
Sbjct: 61 GQKNKKKII 69
>sp|Q65VT1|Y322_MANSM UPF0235 protein MS0322 OS=Mannheimia succiniciproducens (strain
MBEL55E) GN=MS0322 PE=3 SV=1
Length = 95
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 40 VSITIHAKPGSKSCSITDVSDEAVGVQIDAPAKDGEANAALLEYMSSVLGVKRRQVSIGS 99
+ + I +P + I + D+ + + I AP DG ANA LL+Y+S V + + +
Sbjct: 11 LRLRIFLQPKASRDKIIGIHDDELKIAITAPPVDGAANAHLLKYLSKAFKVPKSAIILEK 70
Query: 100 GSKSRDKIVIVEE--ITPENV 118
G +R K + + E + PE +
Sbjct: 71 GELNRHKQLFIPEPKLIPEEL 91
>sp|Q2IPY3|Y1087_ANADE UPF0235 protein Adeh_1087 OS=Anaeromyxobacter dehalogenans (strain
2CP-C) GN=Adeh_1087 PE=3 SV=1
Length = 95
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 37/69 (53%)
Query: 42 ITIHAKPGSKSCSITDVSDEAVGVQIDAPAKDGEANAALLEYMSSVLGVKRRQVSIGSGS 101
+ I +P + D + +Q+ AP DG ANAAL+E+++ LGV+R V++ G
Sbjct: 13 LEILVQPRASRTRAVGEHDGRLKIQLAAPPVDGAANAALVEFLAVALGVRRADVALLRGE 72
Query: 102 KSRDKIVIV 110
R K V V
Sbjct: 73 AGRRKTVRV 81
>sp|A4XZY4|Y4153_PSEMY UPF0235 protein Pmen_4153 OS=Pseudomonas mendocina (strain ymp)
GN=Pmen_4153 PE=3 SV=1
Length = 98
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 36/65 (55%)
Query: 42 ITIHAKPGSKSCSITDVSDEAVGVQIDAPAKDGEANAALLEYMSSVLGVKRRQVSIGSGS 101
+ H +P + + E + +++ AP +G+ANA LL +++ GV + QVS+ SG
Sbjct: 13 LDCHLQPKASKDEFAGLHGERLKIRLTAPPVEGKANAHLLAFLAKAFGVAKAQVSLESGE 72
Query: 102 KSRDK 106
+R K
Sbjct: 73 LNRHK 77
>sp|C0QR78|Y1406_PERMH UPF0235 protein PERMA_1406 OS=Persephonella marina (strain DSM
14350 / EX-H1) GN=PERMA_1406 PE=3 SV=1
Length = 73
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 38/67 (56%)
Query: 42 ITIHAKPGSKSCSITDVSDEAVGVQIDAPAKDGEANAALLEYMSSVLGVKRRQVSIGSGS 101
+ + KP +K I ++ + +++ P + G+AN+ ++E +S L + + ++ + G
Sbjct: 3 VKVKVKPNAKKEEIREIQKDYFEIRVTVPPEKGKANSRVIELLSKHLKIPKSRIKLKKGE 62
Query: 102 KSRDKIV 108
KSR+KI
Sbjct: 63 KSREKIF 69
>sp|B4UGV4|Y1146_ANASK UPF0235 protein AnaeK_1146 OS=Anaeromyxobacter sp. (strain K)
GN=AnaeK_1146 PE=3 SV=1
Length = 95
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 65 VQIDAPAKDGEANAALLEYMSSVLGVKRRQVSIGSGSKSRDKIVIV 110
+Q+ AP DG ANAAL+E+++ LGV+R V++ G R K V V
Sbjct: 36 IQLAAPPVDGAANAALVEFLAVALGVRRADVALLRGETGRRKTVRV 81
>sp|B6YUU2|Y641_THEON UPF0235 protein TON_0641 OS=Thermococcus onnurineus (strain NA1)
GN=TON_0641 PE=3 SV=1
Length = 94
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 7/85 (8%)
Query: 42 ITIHAKPGSKSCSITDVSDEAVG---VQIDAPAKDGEANAALLEYMSSVLGVKRRQVSIG 98
I ++ +P +K I V DE G V+I AP +G+AN ++ + S +LG +V I
Sbjct: 13 ILLYVQPKAKKNEIEGV-DEWRGRLKVKIKAPPVEGKANKEVVRFFSKMLGT---EVEII 68
Query: 99 SGSKSRDKIVIVEEITPENVLNSLG 123
G SR+K ++V+ + + VL LG
Sbjct: 69 RGGTSREKDLLVKGFSSKEVLKKLG 93
>sp|Q9CLC6|Y1313_PASMU UPF0235 protein PM1313 OS=Pasteurella multocida (strain Pm70)
GN=PM1313 PE=3 SV=1
Length = 99
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 37/73 (50%)
Query: 38 SSVSITIHAKPGSKSCSITDVSDEAVGVQIDAPAKDGEANAALLEYMSSVLGVKRRQVSI 97
+ + I +P + I + D + + I AP DG+ANA LL+++S V + + +
Sbjct: 12 EHLRLRIFLQPKASKDQIVGLHDNELKITITAPPIDGQANAHLLKFLSKTFKVPKSSIVL 71
Query: 98 GSGSKSRDKIVIV 110
G +R K +++
Sbjct: 72 EKGELNRHKQILI 84
>sp|Q8TIP5|Y4097_METAC UPF0235 protein MA_4097 OS=Methanosarcina acetivorans (strain ATCC
35395 / DSM 2834 / JCM 12185 / C2A) GN=MA_4097 PE=3 SV=2
Length = 109
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 50/89 (56%), Gaps = 3/89 (3%)
Query: 38 SSVSITIHAKPGSKSCSITDVSDEA---VGVQIDAPAKDGEANAALLEYMSSVLGVKRRQ 94
S + I I PGS+S S+ +E + V++ A+ G+AN L+E ++ + G+ +
Sbjct: 16 SGIIIEIEVTPGSRSLSVPSGYNEWRKRIAVKLTKNAQKGKANEQLIESLAELFGISSSE 75
Query: 95 VSIGSGSKSRDKIVIVEEITPENVLNSLG 123
+ I SG+ S K ++++ I+ + ++ LG
Sbjct: 76 ILINSGATSSKKSLLIKGISYQQAVSVLG 104
>sp|Q8KBF5|Y1832_CHLTE UPF0235 protein CT1832 OS=Chlorobium tepidum (strain ATCC 49652 /
DSM 12025 / TLS) GN=CT1832 PE=3 SV=1
Length = 105
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 43/84 (51%)
Query: 39 SVSITIHAKPGSKSCSITDVSDEAVGVQIDAPAKDGEANAALLEYMSSVLGVKRRQVSIG 98
+V +++ +P S + + E + + + + D AN E ++ LGV R VS+
Sbjct: 10 AVCLSVRVQPRSSKSGVAGMYGEQLKICLKSAPVDNAANKECCELLAKALGVPRSSVSVM 69
Query: 99 SGSKSRDKIVIVEEITPENVLNSL 122
G+ SR K++ VE +TP V +L
Sbjct: 70 KGASSRSKVLKVEGVTPAAVREAL 93
>sp|Q3M687|Y3894_ANAVT UPF0235 protein Ava_3894 OS=Anabaena variabilis (strain ATCC 29413
/ PCC 7937) GN=Ava_3894 PE=3 SV=1
Length = 75
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 38/68 (55%)
Query: 44 IHAKPGSKSCSITDVSDEAVGVQIDAPAKDGEANAALLEYMSSVLGVKRRQVSIGSGSKS 103
+ KP SK I + D ++ V + +P DG+AN L++ ++ V + ++I SG S
Sbjct: 5 VKVKPNSKQQKIAEQDDGSLTVHLKSPPVDGKANEELIKLLAEKFAVPKSHITIKSGLSS 64
Query: 104 RDKIVIVE 111
R K++ ++
Sbjct: 65 RQKLIEID 72
>sp|B0BQW9|Y1398_ACTPJ UPF0235 protein APJL_1398 OS=Actinobacillus pleuropneumoniae
serotype 3 (strain JL03) GN=APJL_1398 PE=3 SV=1
Length = 98
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 33/68 (48%)
Query: 37 PSSVSITIHAKPGSKSCSITDVSDEAVGVQIDAPAKDGEANAALLEYMSSVLGVKRRQVS 96
P + + I +P + I + D + + I AP DG ANA LL+Y+S + V + +
Sbjct: 10 PYGIRLRIFLQPKASRDQIVGLHDSELKIAITAPPVDGAANAHLLKYLSKLFKVPKSSIV 69
Query: 97 IGSGSKSR 104
+ G R
Sbjct: 70 LEKGELQR 77
>sp|A5D180|Y1821_PELTS UPF0235 protein PTH_1821 OS=Pelotomaculum thermopropionicum (strain
DSM 13744 / JCM 10971 / SI) GN=PTH_1821 PE=3 SV=1
Length = 95
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 44/84 (52%)
Query: 40 VSITIHAKPGSKSCSITDVSDEAVGVQIDAPAKDGEANAALLEYMSSVLGVKRRQVSIGS 99
V + + +P + + + ++A+ +++ AP DGEAN A +++ L + +V I S
Sbjct: 11 VLLKVRVQPRAARNQVAGLYEDALKIRLTAPPVDGEANEACRAFLADSLSLPPSKVEIVS 70
Query: 100 GSKSRDKIVIVEEITPENVLNSLG 123
G SR K+V + + E V + G
Sbjct: 71 GHASRTKVVKIAGVGAEKVRRAFG 94
>sp|A3N228|Y1380_ACTP2 UPF0235 protein APL_1380 OS=Actinobacillus pleuropneumoniae
serotype 5b (strain L20) GN=APL_1380 PE=3 SV=1
Length = 97
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 38/80 (47%)
Query: 33 RLVPPSSVSITIHAKPGSKSCSITDVSDEAVGVQIDAPAKDGEANAALLEYMSSVLGVKR 92
R+ P + + I +P + I + D + + I A DG ANA LL+Y+S + V +
Sbjct: 6 RIENPCGIRLRIFLQPKASRDQIVGLHDNELKIAITALPVDGAANAHLLKYLSKLFKVPK 65
Query: 93 RQVSIGSGSKSRDKIVIVEE 112
+ + G R K + V E
Sbjct: 66 SSIVLEKGELQRHKQLFVPE 85
>sp|Q8YS95|Y3196_NOSS1 UPF0235 protein asl3196 OS=Nostoc sp. (strain PCC 7120 / UTEX 2576)
GN=asl3196 PE=3 SV=1
Length = 75
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 38/68 (55%)
Query: 44 IHAKPGSKSCSITDVSDEAVGVQIDAPAKDGEANAALLEYMSSVLGVKRRQVSIGSGSKS 103
+ KP SK I + D ++ V + +P DG+AN L++ ++ V + ++I SG S
Sbjct: 5 VKVKPNSKQQKIAEQDDGSLTVHLKSPPVDGKANEELIKLLAEKFDVPKSHITIKSGLSS 64
Query: 104 RDKIVIVE 111
+ K++ +E
Sbjct: 65 KQKLIEIE 72
>sp|A4J2F3|Y717_DESRM UPF0235 protein Dred_0717 OS=Desulfotomaculum reducens (strain
MI-1) GN=Dred_0717 PE=3 SV=1
Length = 94
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 42/77 (54%)
Query: 38 SSVSITIHAKPGSKSCSITDVSDEAVGVQIDAPAKDGEANAALLEYMSSVLGVKRRQVSI 97
+ V + + +P + S+ + A+ V++ AP DG AN A ++ + GV + +V I
Sbjct: 9 NGVVVKVRVQPRASKNSLAGEMEGALKVRLTAPPVDGAANEACCKFFGELFGVAKSKVEI 68
Query: 98 GSGSKSRDKIVIVEEIT 114
+G R+K+V ++ +T
Sbjct: 69 IAGHTGRNKLVHIQGVT 85
>sp|B7KEV7|Y673_CYAP7 UPF0235 protein PCC7424_0673 OS=Cyanothece sp. (strain PCC 7424)
GN=PCC7424_0673 PE=3 SV=1
Length = 73
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 40/69 (57%)
Query: 40 VSITIHAKPGSKSCSITDVSDEAVGVQIDAPAKDGEANAALLEYMSSVLGVKRRQVSIGS 99
+ I + KP +K I + D ++ + + +P +G+AN L++ ++ V + Q+SI S
Sbjct: 1 MKIQVKVKPNAKHQKIEEAEDGSLIISLKSPPVEGKANQELIKLLAQKYRVTKSQISIQS 60
Query: 100 GSKSRDKIV 108
G SR+K++
Sbjct: 61 GLSSRNKLI 69
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.304 0.122 0.318
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,497,872
Number of Sequences: 539616
Number of extensions: 1597262
Number of successful extensions: 2773
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 157
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 2614
Number of HSP's gapped (non-prelim): 173
length of query: 128
length of database: 191,569,459
effective HSP length: 94
effective length of query: 34
effective length of database: 140,845,555
effective search space: 4788748870
effective search space used: 4788748870
T: 11
A: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.9 bits)
S2: 55 (25.8 bits)