Query 033057
Match_columns 128
No_of_seqs 117 out of 767
Neff 5.1
Searched_HMMs 29240
Date Mon Mar 25 15:08:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033057.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/033057hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1n91_A ORF, hypothetical prote 100.0 2.5E-30 8.5E-35 185.8 8.0 92 30-122 6-99 (108)
2 1jrm_A MTH0637, conserved hypo 100.0 1.5E-29 5.2E-34 180.5 8.4 93 30-126 5-99 (104)
3 3djh_A Macrophage migration in 78.8 6.5 0.00022 26.4 6.2 58 41-99 36-98 (114)
4 3kan_A D-dopachrome tautomeras 76.9 8.6 0.00029 26.1 6.4 58 41-99 36-99 (117)
5 3b64_A Macrophage migration in 76.0 14 0.00047 24.4 7.2 58 42-100 38-100 (112)
6 3fwu_A Macrophage migration in 75.3 13 0.00046 25.9 7.3 57 42-99 59-120 (133)
7 4dh4_A MIF; trimer, isomerase; 75.3 11 0.00037 25.2 6.5 57 42-99 38-99 (114)
8 3fwt_A Macrophage migration in 74.6 7.4 0.00025 27.2 5.7 58 41-99 58-120 (133)
9 3hrd_B Nicotinate dehydrogenas 70.4 8.1 0.00028 31.1 5.7 45 60-104 33-77 (330)
10 2xcz_A Possible ATLS1-like lig 68.5 22 0.00075 23.4 6.8 55 44-99 40-99 (115)
11 2wkb_A Macrophage migration in 64.6 19 0.00065 24.4 6.0 43 59-101 54-101 (125)
12 1uiz_A MIF, macrophage migrati 64.5 12 0.0004 24.8 4.8 41 59-99 54-99 (115)
13 3abf_A 4-oxalocrotonate tautom 64.4 5.9 0.0002 23.3 2.9 22 78-99 22-43 (64)
14 1t6a_A Rbstp2229 gene product; 64.2 5.6 0.00019 28.7 3.2 38 59-100 76-118 (126)
15 3t5s_A Gilaa.00834.A, macropha 63.6 21 0.00072 24.9 6.2 43 57-99 73-120 (135)
16 2opa_A Probable tautomerase YW 63.1 5.3 0.00018 23.3 2.5 22 78-99 21-42 (61)
17 2os5_A Acemif; macrophage migr 62.3 18 0.00061 24.2 5.4 56 43-99 39-99 (119)
18 1otf_A 4-oxalocrotonate tautom 62.0 5.6 0.00019 23.2 2.5 23 77-99 20-42 (62)
19 2aal_A Malonate semialdehyde d 57.1 42 0.0014 22.7 6.8 44 59-102 63-110 (131)
20 1hfo_A Migration inhibitory fa 56.0 9 0.00031 25.3 2.9 41 59-99 53-98 (113)
21 2x4k_A 4-oxalocrotonate tautom 55.6 8.6 0.00029 22.1 2.5 37 62-98 5-44 (63)
22 3m20_A 4-oxalocrotonate tautom 54.8 9.6 0.00033 22.8 2.7 25 78-102 20-44 (62)
23 4hhu_A OR280; engineered prote 54.0 61 0.0021 23.6 7.3 65 58-126 38-105 (170)
24 3m21_A Probable tautomerase HP 53.0 9.6 0.00033 23.0 2.5 26 77-102 23-48 (67)
25 1rm6_A 4-hydroxybenzoyl-COA re 52.7 23 0.00077 31.7 5.8 46 59-104 468-513 (769)
26 1n62_B Carbon monoxide dehydro 52.0 22 0.00074 32.0 5.6 46 59-104 515-560 (809)
27 1gyx_A YDCE, B1461, hypothetic 51.3 10 0.00035 23.6 2.5 22 77-98 21-42 (76)
28 3mb2_A 4-oxalocrotonate tautom 51.2 13 0.00044 22.8 2.9 25 77-101 21-45 (72)
29 1ffv_B CUTL, molybdoprotein of 49.8 25 0.00084 31.7 5.6 46 59-104 509-554 (803)
30 2w3s_B Xanthine dehydrogenase; 48.7 23 0.00077 31.8 5.1 46 59-104 475-520 (777)
31 3ry0_A Putative tautomerase; o 48.6 13 0.00043 22.3 2.5 23 77-99 20-42 (65)
32 1t3q_B Quinoline 2-oxidoreduct 48.4 26 0.00088 31.4 5.5 45 59-103 493-537 (788)
33 3nvz_C Xanthine dehydrogenase/ 46.7 21 0.0007 32.0 4.5 46 59-104 455-500 (755)
34 1mww_A Hypothetical protein HI 46.6 15 0.00052 24.8 2.9 41 59-99 56-101 (128)
35 3ej9_A Alpha-subunit of trans- 44.3 15 0.00053 22.9 2.5 25 77-101 21-45 (76)
36 4hti_A Receptor-type tyrosine- 39.7 52 0.0018 22.6 4.8 61 61-122 10-74 (99)
37 3m63_B Ubiquitin domain-contai 37.9 26 0.00089 23.1 3.0 64 24-101 11-74 (101)
38 3hrd_A Nicotinate dehydrogenas 36.6 37 0.0013 28.1 4.3 35 60-99 198-232 (425)
39 3mb2_B 4-oxalocrotonate tautom 35.5 28 0.00097 22.7 2.7 35 77-111 22-56 (72)
40 1dgj_A Aldehyde oxidoreductase 34.6 61 0.0021 29.6 5.7 46 59-104 642-690 (907)
41 2kvr_A Ubiquitin carboxyl-term 34.4 20 0.00069 25.2 2.0 35 77-111 68-102 (130)
42 3unc_A Xanthine dehydrogenase/ 31.5 47 0.0016 31.8 4.5 46 59-104 1025-1070(1332)
43 1vlb_A Aldehyde oxidoreductase 30.6 61 0.0021 29.6 5.0 46 59-104 640-688 (907)
44 3zyv_A AOH1; oxidoreductase, m 29.2 48 0.0016 31.6 4.2 46 59-104 1030-1075(1335)
45 3n4h_A Putative tautomerase; C 27.3 46 0.0016 23.0 2.9 43 61-103 61-108 (148)
46 2daf_A FLJ35834 protein; hypot 26.7 51 0.0017 23.2 3.0 24 78-101 40-63 (118)
47 3a9j_A Ubiquitin; protein comp 26.6 62 0.0021 18.9 3.1 25 77-101 23-47 (76)
48 1ndd_A NEDD8, protein (ubiquit 25.7 66 0.0022 18.8 3.1 25 77-101 23-47 (76)
49 2bwf_A Ubiquitin-like protein 25.5 66 0.0023 19.0 3.1 25 77-101 26-50 (77)
50 3n3k_B Ubiquitin; hydrolase, p 25.3 65 0.0022 19.4 3.1 25 77-101 26-50 (85)
51 2kl8_A OR15; structural genomi 23.7 1E+02 0.0034 20.1 3.8 33 59-93 38-73 (85)
52 1wh0_A Ubiquitin carboxyl-term 23.3 1.9E+02 0.0065 20.1 5.6 50 21-70 12-62 (134)
53 4g9p_A 4-hydroxy-3-methylbut-2 22.6 75 0.0026 26.9 3.8 44 60-103 256-300 (406)
54 3nvz_C Xanthine dehydrogenase/ 22.4 84 0.0029 28.0 4.3 35 60-99 187-221 (755)
55 2dzi_A Ubiquitin-like protein 22.3 73 0.0025 19.0 2.9 25 77-101 30-54 (81)
56 1rm6_A 4-hydroxybenzoyl-COA re 22.0 90 0.0031 27.8 4.4 34 61-99 205-238 (769)
57 3gr5_A ESCC; secretin, type II 21.8 1.6E+02 0.0055 20.9 5.0 59 58-125 11-69 (156)
58 1iv3_A 2-C-methyl-D-erythritol 21.8 1.4E+02 0.0048 21.9 4.7 37 67-103 99-135 (152)
59 2pmp_A 2-C-methyl-D-erythritol 21.7 1.4E+02 0.0047 22.1 4.7 37 67-103 102-138 (160)
60 1s3a_A NADH-ubiquinone oxidore 21.3 49 0.0017 22.0 2.0 32 94-126 67-98 (102)
61 2zqe_A MUTS2 protein; alpha/be 21.1 79 0.0027 20.2 2.9 30 74-103 15-44 (83)
62 1wh3_A 59 kDa 2'-5'-oligoadeny 20.7 99 0.0034 18.8 3.3 25 77-101 30-54 (87)
63 3mlc_A FG41 malonate semialdeh 20.7 62 0.0021 22.4 2.5 43 59-102 62-109 (136)
64 1t3q_B Quinoline 2-oxidoreduct 20.1 1E+02 0.0035 27.5 4.4 34 61-99 215-248 (788)
No 1
>1n91_A ORF, hypothetical protein; alpha+beta, northeast structural genomics consortium, PSI, P structure initiative, NESG; NMR {Escherichia coli} SCOP: d.206.1.1 PDB: 1yh5_A
Probab=99.96 E-value=2.5e-30 Score=185.83 Aligned_cols=92 Identities=25% Similarity=0.412 Sum_probs=85.6
Q ss_pred cceEEeCCCeEEEEEEEecCCCccccccccCCeEEEEEeCCCCcChhHHHHHHHHHhhhCCcCccEEEeecCCCCceEEE
Q 033057 30 SCIRLVPPSSVSITIHAKPGSKSCSITDVSDEAVGVQIDAPAKDGEANAALLEYMSSVLGVKRRQVSIGSGSKSRDKIVI 109 (128)
Q Consensus 30 ~~i~~~~~~~v~I~I~VkP~Ak~~~I~~~~~~~l~v~V~apP~~GkAN~eLi~~LAk~l~Vpks~I~Iv~G~~SR~K~v~ 109 (128)
+|++.. +++++|+|+|+|+|++++|.+++++.|+|+|+|||+||+||++|++|||+.||||+|+|+|++|++||+|+|+
T Consensus 6 ~~~~~~-~~~v~l~v~V~P~A~r~~I~g~~~~~LkV~v~ApP~dGkAN~ali~~LAk~l~V~ks~V~Iv~G~tSR~K~v~ 84 (108)
T 1n91_A 6 SAVTVN-DDGLVLRLYIQPKASRDSIVGLHGDEVKVAITAPPVDGQANSHLVKFLGKQFRVAKSQVVIEKGELGRHKQIK 84 (108)
T ss_dssp CSEEEC-SSEEEEEEEEECSSSSCEEEEECSSCEEEECCCCSSHHHHHHHHHHHHHHHTCCCTTTEEESSCTTSSEEEEE
T ss_pred ceEEEC-CCeEEEEEEEeeCCCcceeecccCCEEEEEEecCCCCChHHHHHHHHHHHHhCCccceEEEEecCCCCccEEE
Confidence 488877 5899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred Ecc--CCHHHHHHHH
Q 033057 110 VEE--ITPENVLNSL 122 (128)
Q Consensus 110 I~g--~~~e~l~~~L 122 (128)
|.+ .+++++...|
T Consensus 85 I~~~~~~~~~i~~~~ 99 (108)
T 1n91_A 85 IINPQQIPPEVAALI 99 (108)
T ss_dssp EESCCCCCHHHHCCC
T ss_pred EeCCcCCHHHHHHhh
Confidence 998 5788876654
No 2
>1jrm_A MTH0637, conserved hypothetical protein MTH637; alpha-beta protein, structural genomics, OCSP, NESG; NMR {Methanothermobacterthermautotrophicus} SCOP: d.206.1.1
Probab=99.96 E-value=1.5e-29 Score=180.49 Aligned_cols=93 Identities=27% Similarity=0.482 Sum_probs=88.0
Q ss_pred cceEEeCCCeEEEEEEEecCCCcccccccc--CCeEEEEEeCCCCcChhHHHHHHHHHhhhCCcCccEEEeecCCCCceE
Q 033057 30 SCIRLVPPSSVSITIHAKPGSKSCSITDVS--DEAVGVQIDAPAKDGEANAALLEYMSSVLGVKRRQVSIGSGSKSRDKI 107 (128)
Q Consensus 30 ~~i~~~~~~~v~I~I~VkP~Ak~~~I~~~~--~~~l~v~V~apP~~GkAN~eLi~~LAk~l~Vpks~I~Iv~G~~SR~K~ 107 (128)
+|++.. +++++|+|+|+|+|+++.|.+++ ++.|+|+|+|||+||+||++|++|||+.|| |+|+|++|++||+|+
T Consensus 5 ~~~~~~-~~~~~l~v~v~P~A~r~~i~g~~~~~~~lkv~v~ApP~dGkAN~ali~~LAk~l~---s~V~i~~G~tsR~K~ 80 (104)
T 1jrm_A 5 DCLREV-GDDLLVNIEVSPASGKFGIPSYNEWRKRIEVKIHSPPQKGKANREIIKEFSETFG---RDVEIVSGQKSRQKT 80 (104)
T ss_dssp CCEEEE-TTEEEEEEESCCCSSSCCCCCCCTTTTCCCCCCCTTCCCCCHHHHHHHHHHHHHS---SEEEECSCGGGSEEE
T ss_pred hhEEEC-CCcEEEEEEEeeCCCcceEeeeeccCCEEEEEEecCCCCChHHHHHHHHHHHHhC---CCEEEEecCCCCceE
Confidence 688877 47899999999999999999955 999999999999999999999999999999 999999999999999
Q ss_pred EEEccCCHHHHHHHHhhhh
Q 033057 108 VIVEEITPENVLNSLGKAS 126 (128)
Q Consensus 108 v~I~g~~~e~l~~~L~~~~ 126 (128)
|+|.+++++++.++|.+.+
T Consensus 81 v~I~~~~~~~l~~~L~~~~ 99 (104)
T 1jrm_A 81 IRIQGMGRDLFLKLVSEKF 99 (104)
T ss_dssp EEEESCCHHHHHHHHHHTS
T ss_pred EEEcCCCHHHHHHHHHHHh
Confidence 9999999999999998765
No 3
>3djh_A Macrophage migration inhibitory factor; homotrimer, cytokine, inflammatory response, isomerase, phosphoprotein; 1.25A {Homo sapiens} SCOP: d.80.1.3 PDB: 1ca7_A* 1ljt_A* 2ooh_A* 2ooz_A* 3b9s_A* 2oow_A* 3ce4_A 3dji_A* 3ijg_A* 3ijj_A* 3smb_A* 3smc_A* 3u18_A* 4f2k_A* 1gd0_A* 1gcz_A* 3jsf_A* 3jsg_A* 3jtu_A* 3l5p_A* ...
Probab=78.84 E-value=6.5 Score=26.40 Aligned_cols=58 Identities=19% Similarity=0.232 Sum_probs=36.6
Q ss_pred EEEEEEecCCCccccccccCCeEEEEEeCCCCcC-hhH----HHHHHHHHhhhCCcCccEEEee
Q 033057 41 SITIHAKPGSKSCSITDVSDEAVGVQIDAPAKDG-EAN----AALLEYMSSVLGVKRRQVSIGS 99 (128)
Q Consensus 41 ~I~I~VkP~Ak~~~I~~~~~~~l~v~V~apP~~G-kAN----~eLi~~LAk~l~Vpks~I~Iv~ 99 (128)
+|.|.+.|+..- .+.+-.+....+.|+.-..-+ ..| ++|.++|.+.||||+.++-|..
T Consensus 36 ~vmV~~~~~~~m-~fgGs~~P~a~~~v~sig~~~~~~n~~~s~~i~~~l~~~Lgi~~~riyI~f 98 (114)
T 3djh_A 36 YIAVHVVPDQLM-AFGGSSEPCALCSLHSIGKIGGAQNRSYSKLLCGLLAERLRISPDRVYINY 98 (114)
T ss_dssp GCEEEEECSCEE-EETTBCSSCEEEEEEESSCCSHHHHHHHHHHHHHHHHHHHCCCGGGEEEEE
T ss_pred HeEEEEeCCceE-EEcCcCCCEEEEEEEEccCCCHHHHHHHHHHHHHHHHHHhCcCcceEEEEE
Confidence 355566676522 233334556666666554422 333 5678889999999999998864
No 4
>3kan_A D-dopachrome tautomerase; immune response, cytokine, cytokine-inhibitor C; HET: RW1; 1.13A {Homo sapiens} SCOP: d.80.1.3 PDB: 1dpt_A* 3ker_A*
Probab=76.86 E-value=8.6 Score=26.14 Aligned_cols=58 Identities=14% Similarity=0.347 Sum_probs=35.9
Q ss_pred EEEEEEecCCCccccccccCCeEEEEEeCCCCcC------hhHHHHHHHHHhhhCCcCccEEEee
Q 033057 41 SITIHAKPGSKSCSITDVSDEAVGVQIDAPAKDG------EANAALLEYMSSVLGVKRRQVSIGS 99 (128)
Q Consensus 41 ~I~I~VkP~Ak~~~I~~~~~~~l~v~V~apP~~G------kAN~eLi~~LAk~l~Vpks~I~Iv~ 99 (128)
+|.|.+.|+..-. +.+-.+.+..+.|+.-..-| +-.++|.++|.+.||||+.++-|..
T Consensus 36 ~vmV~v~~~~~m~-fgGs~~P~a~~~v~siG~~~~~~~n~~~s~~i~~~l~~~Lgi~~~RiyI~f 99 (117)
T 3kan_A 36 RVNVTVRPGLAMA-LSGSTEPCAQLSISSIGVVGTAEDNRSHSAHFFEFLTKELALGQDRILIRF 99 (117)
T ss_dssp GCEEEEECSCCCC-BTTBCSSCEEEEEEEESSSSSHHHHHHHHHHHHHHHHHHHTCCGGGEEEEE
T ss_pred HEEEEEeCCCeEE-ECCCCCceEEEEEEEecCCCcHHHHHHHHHHHHHHHHHHhCcCcCeEEEEE
Confidence 3557777755433 33334445555555443332 3335688899999999999998854
No 5
>3b64_A Macrophage migration inhibitory factor-like protein; cytokine, MIF, LM1740MIF, lmmif, unknown function; 1.03A {Leishmania major}
Probab=75.99 E-value=14 Score=24.43 Aligned_cols=58 Identities=7% Similarity=0.057 Sum_probs=37.3
Q ss_pred EEEEEecCCCccccccccCCeEEEEEeCCC-CcChhHH----HHHHHHHhhhCCcCccEEEeec
Q 033057 42 ITIHAKPGSKSCSITDVSDEAVGVQIDAPA-KDGEANA----ALLEYMSSVLGVKRRQVSIGSG 100 (128)
Q Consensus 42 I~I~VkP~Ak~~~I~~~~~~~l~v~V~apP-~~GkAN~----eLi~~LAk~l~Vpks~I~Iv~G 100 (128)
+.|.+.|+..- .+.+..+....|.|+..+ .....|+ +|.++|.+.||+++.+|-|.-=
T Consensus 38 ~~v~~~~~~~~-~~~G~~~~~~~i~i~~~~g~~~eqk~~l~~~i~~~l~~~lgi~~~~v~I~~~ 100 (112)
T 3b64_A 38 VMMTFHDSTPM-HFFGSTDPVACVRVEALGGYGPSEPEKVTSIVTAAITKECGIVADRIFVLYF 100 (112)
T ss_dssp CEEEEECSCCC-CBTTBCSSCEEEEEECTTCCCTTHHHHHHHHHHHHHHHHHCCCGGGEEEEEE
T ss_pred EEEEEeCCceE-EECCCCCCEEEEEEEEcCCCCHHHHHHHHHHHHHHHHHHhCcCcceEEEEEE
Confidence 34444454332 233445677888888665 4445554 4566788899999999988653
No 6
>3fwu_A Macrophage migration inhibitory factor-like protein; homotrimer, tautomerase, cytokine; 1.80A {Leishmania major}
Probab=75.35 E-value=13 Score=25.90 Aligned_cols=57 Identities=7% Similarity=0.084 Sum_probs=37.8
Q ss_pred EEEEEecCCCccccccccCCeEEEEEeCCCCc-ChhH----HHHHHHHHhhhCCcCccEEEee
Q 033057 42 ITIHAKPGSKSCSITDVSDEAVGVQIDAPAKD-GEAN----AALLEYMSSVLGVKRRQVSIGS 99 (128)
Q Consensus 42 I~I~VkP~Ak~~~I~~~~~~~l~v~V~apP~~-GkAN----~eLi~~LAk~l~Vpks~I~Iv~ 99 (128)
+.|.+.|+..- .+.+-.+....+.|+.-..- ...| ++|.++|.+.||||+.+|-|..
T Consensus 59 vmV~~~~~~~m-~fgGs~dP~a~v~i~sig~~~~e~n~~~s~~i~~~l~~~LgI~~~riyI~f 120 (133)
T 3fwu_A 59 VMMTFHDSTPM-HFFGSTDPVACVRVEALGGYGPSEPEKVTSIVTAAITKECGIVADRIFVLY 120 (133)
T ss_dssp CEEEEECSCCC-CBTTBCSSCEEEEEECTTCCCTTHHHHHHHHHHHHHHHHHCCCGGGEEEEE
T ss_pred EEEEEECCceE-EECCcCCCEEEEEEEEcCCCCHHHHHHHHHHHHHHHHHHhCcChhhEEEEE
Confidence 56666775432 23344567777888764433 3444 5677888889999999998864
No 7
>4dh4_A MIF; trimer, isomerase; 1.82A {Toxoplasma gondii}
Probab=75.33 E-value=11 Score=25.18 Aligned_cols=57 Identities=16% Similarity=0.165 Sum_probs=34.6
Q ss_pred EEEEEecCCCccccccccCCeEEEEEeCCC-CcChhH----HHHHHHHHhhhCCcCccEEEee
Q 033057 42 ITIHAKPGSKSCSITDVSDEAVGVQIDAPA-KDGEAN----AALLEYMSSVLGVKRRQVSIGS 99 (128)
Q Consensus 42 I~I~VkP~Ak~~~I~~~~~~~l~v~V~apP-~~GkAN----~eLi~~LAk~l~Vpks~I~Iv~ 99 (128)
+.|.+.|+.. =.+.+-.+....+.|+.-. .....| ++|.++|.+.||+|+.++-|..
T Consensus 38 v~V~~~~~~~-m~fgGs~~p~a~v~i~~ig~~~~e~~~~l~~~i~~~l~~~Lgi~~~riyI~f 99 (114)
T 4dh4_A 38 VMVGYSQTGQ-MRFGGSSDPCAFIRVASIGGITSSTNCKIAAALSAACERHLGVPKNRIYTTF 99 (114)
T ss_dssp CEEEEEECSC-CCBTTBCSCCEEEEEEEESCCCHHHHHHHHHHHHHHHHHHHCCCGGGEEEEE
T ss_pred EEEEEeCCce-EEECCcCCCeEEEEEEEEcCCCHHHHHHHHHHHHHHHHHHhCcCcccEEEEE
Confidence 4566677652 2233334555555554433 222344 5567888889999999998864
No 8
>3fwt_A Macrophage migration inhibitory factor-like protein; homotrimer, tautomerase, cytokine; 1.90A {Leishmania major}
Probab=74.63 E-value=7.4 Score=27.24 Aligned_cols=58 Identities=5% Similarity=0.016 Sum_probs=36.4
Q ss_pred EEEEEEecCCCccccccccCCeEEEEEeCCC-CcChhH----HHHHHHHHhhhCCcCccEEEee
Q 033057 41 SITIHAKPGSKSCSITDVSDEAVGVQIDAPA-KDGEAN----AALLEYMSSVLGVKRRQVSIGS 99 (128)
Q Consensus 41 ~I~I~VkP~Ak~~~I~~~~~~~l~v~V~apP-~~GkAN----~eLi~~LAk~l~Vpks~I~Iv~ 99 (128)
.+.|.+.|+..-. +.+-.+....+.|+... .....| ++|.++|.+.||||+.+|-|..
T Consensus 58 ~v~V~~~~~~~m~-fgGs~dP~a~v~v~sig~~~~e~n~~~s~~i~~~l~~~LgI~~~rvyI~f 120 (133)
T 3fwt_A 58 FVMTAFSDKTPIS-FQGSTAPAAYVRVESWGEYAPSKPKMMTPRIAAAITKECGIPAERIYVFY 120 (133)
T ss_dssp CCEEEEECSCCCC-BTTBCSSCEEEEEEEEECCCTHHHHHHHHHHHHHHHHHHCCCGGGEEEEE
T ss_pred EEEEEEECCceEE-ECCCCCCeEEEEEEECCCCCHHHHHHHHHHHHHHHHHHhCcChhhEEEEE
Confidence 4556666754432 33334566666666521 233334 5677888889999999998864
No 9
>3hrd_B Nicotinate dehydrogenase medium molybdopterin subunit; selenium ligand, iron, iron-sulfur, metal-binding, oxidoreductase; HET: MCN FAD; 2.20A {Eubacterium barkeri}
Probab=70.36 E-value=8.1 Score=31.13 Aligned_cols=45 Identities=16% Similarity=0.237 Sum_probs=40.1
Q ss_pred CCeEEEEEeCCCCcChhHHHHHHHHHhhhCCcCccEEEeecCCCC
Q 033057 60 DEAVGVQIDAPAKDGEANAALLEYMSSVLGVKRRQVSIGSGSKSR 104 (128)
Q Consensus 60 ~~~l~v~V~apP~~GkAN~eLi~~LAk~l~Vpks~I~Iv~G~~SR 104 (128)
++.+.|.+......-=.+..+....|+.||||..+|+++.|-|..
T Consensus 33 DG~V~v~~g~~emGQG~~T~laQIaAe~Lgi~~e~V~v~~~DT~~ 77 (330)
T 3hrd_B 33 DGSANVMFGAADIGQGSGTAMAQIAAEELGLDYEKIHVTWGDTMV 77 (330)
T ss_dssp TSCEEEEECCCCSSSCHHHHHHHHHHHHHTCCGGGEEEEESBTTT
T ss_pred CCeEEEEECCCCCCCCHHHHHHHHHHHHhCCCHHHEEEEecCCCC
Confidence 678888888888766688999999999999999999999998875
No 10
>2xcz_A Possible ATLS1-like light-inducible protein; cytokine, tautomerase, immune system, cyanobacterium; 1.64A {Prochlorococcus marinus}
Probab=68.50 E-value=22 Score=23.44 Aligned_cols=55 Identities=15% Similarity=0.242 Sum_probs=34.0
Q ss_pred EEEecCCCccccccccCCeEEEEEeCCC-CcChhHHH----HHHHHHhhhCCcCccEEEee
Q 033057 44 IHAKPGSKSCSITDVSDEAVGVQIDAPA-KDGEANAA----LLEYMSSVLGVKRRQVSIGS 99 (128)
Q Consensus 44 I~VkP~Ak~~~I~~~~~~~l~v~V~apP-~~GkAN~e----Li~~LAk~l~Vpks~I~Iv~ 99 (128)
|.+.|...- .+.+-.+....|.|+.-+ ..-..|++ |.++|.+.||+|+.+|-|.-
T Consensus 40 v~~~~~~~~-~~~g~~~~~~~v~i~~~~g~t~eqk~~l~~~i~~~l~~~lgi~~~~v~I~~ 99 (115)
T 2xcz_A 40 TSLQCGVPM-TFSGNTEPTCYVEVKSIGALDGSRTQEVSELVCGHIEQNLGIPADRIYIGF 99 (115)
T ss_dssp EEEECSCCC-CBTTBCSSCEEEEEEESSCCCTTHHHHHHHHHHHHHHHHHCCCGGGEEEEE
T ss_pred EEEECCCce-EECCCCCcEEEEEEEEecCCCHHHHHHHHHHHHHHHHHHhCcCcccEEEEE
Confidence 344454332 233445667777776544 34455554 55678889999999998864
No 11
>2wkb_A Macrophage migration inhibitory factor; cytokine; HET: CME; 1.78A {Plasmodium berghei} PDB: 3gad_A 3gac_A 2wkf_A*
Probab=64.58 E-value=19 Score=24.36 Aligned_cols=43 Identities=21% Similarity=0.217 Sum_probs=27.9
Q ss_pred cCCeEEEEEeCCC-CcChhH----HHHHHHHHhhhCCcCccEEEeecC
Q 033057 59 SDEAVGVQIDAPA-KDGEAN----AALLEYMSSVLGVKRRQVSIGSGS 101 (128)
Q Consensus 59 ~~~~l~v~V~apP-~~GkAN----~eLi~~LAk~l~Vpks~I~Iv~G~ 101 (128)
.+....|.|+.-. ..-+.| ++|.++|.+.||+|+.+|-|+-=.
T Consensus 54 ~dp~~~v~I~~~~g~t~eqk~~l~~~i~~~l~~~lgi~~~~v~I~~~e 101 (125)
T 2wkb_A 54 NEGYCFVRLTSIGGINRSNNSLLADKITKILSNHLSVKPRRVYIEFRD 101 (125)
T ss_dssp CSSCEEEEEECC-----CTHHHHHHHHHHHHHHHHCCCGGGEEEEEEC
T ss_pred CCCcEEEEEEECCCCCHHHHHHHHHHHHHHHHHHhCcCcceEEEEEEE
Confidence 4666777777544 233344 456678888999999999886433
No 12
>1uiz_A MIF, macrophage migration inhibitory factor; cytokine, tautomerase; 2.50A {Xenopus laevis} SCOP: d.80.1.3
Probab=64.50 E-value=12 Score=24.85 Aligned_cols=41 Identities=17% Similarity=0.224 Sum_probs=28.9
Q ss_pred cCCeEEEEEeCCC-CcChhHH----HHHHHHHhhhCCcCccEEEee
Q 033057 59 SDEAVGVQIDAPA-KDGEANA----ALLEYMSSVLGVKRRQVSIGS 99 (128)
Q Consensus 59 ~~~~l~v~V~apP-~~GkAN~----eLi~~LAk~l~Vpks~I~Iv~ 99 (128)
.+....|.|+..+ ..-..|+ +|.++|.+.||+|+.+|-|.-
T Consensus 54 ~~~~~~v~i~~~~g~~~eqk~~l~~~i~~~l~~~lgi~~~~v~I~~ 99 (115)
T 1uiz_A 54 TDPCAVCSLCSIGKIGGPQNKSYTKLLCDILTKQLNIPANRVYINY 99 (115)
T ss_dssp CSSCEEEEEEESSCCSHHHHHHHHHHHHHHHHHHHCCCGGGEEEEE
T ss_pred CCCeEEEEEEEecCCCHHHHHHHHHHHHHHHHHHhCcCcceEEEEE
Confidence 4677777777655 3344454 456678889999999998864
No 13
>3abf_A 4-oxalocrotonate tautomerase; isomerase; 1.94A {Thermus thermophilus}
Probab=64.41 E-value=5.9 Score=23.31 Aligned_cols=22 Identities=27% Similarity=0.246 Sum_probs=17.8
Q ss_pred HHHHHHHHhhhCCcCccEEEee
Q 033057 78 AALLEYMSSVLGVKRRQVSIGS 99 (128)
Q Consensus 78 ~eLi~~LAk~l~Vpks~I~Iv~ 99 (128)
++|.+.|++.||+|..+|.|.-
T Consensus 22 ~~lt~~l~~~lg~~~~~v~V~i 43 (64)
T 3abf_A 22 RRLTEMASRLLGEPYEEVRVIL 43 (64)
T ss_dssp HHHHHHHHHHTTCCGGGEEEEE
T ss_pred HHHHHHHHHHhCCCcccEEEEE
Confidence 4566788899999999998753
No 14
>1t6a_A Rbstp2229 gene product; structural genomics, hypothetical protein, PSI, protein structure initiative; HET: MSE; 2.05A {Geobacillus stearothermophilus} SCOP: d.129.8.1
Probab=64.16 E-value=5.6 Score=28.68 Aligned_cols=38 Identities=26% Similarity=0.491 Sum_probs=30.1
Q ss_pred cCCeEEEEEeCCCC-----cChhHHHHHHHHHhhhCCcCccEEEeec
Q 033057 59 SDEAVGVQIDAPAK-----DGEANAALLEYMSSVLGVKRRQVSIGSG 100 (128)
Q Consensus 59 ~~~~l~v~V~apP~-----~GkAN~eLi~~LAk~l~Vpks~I~Iv~G 100 (128)
.++.=.|.|.=|+. .||||+ +++|||+.|. ..+.+-.|
T Consensus 76 e~~~~fIQi~LP~~AThGDKgKANE-fckfLAK~l~---geL~LFNG 118 (126)
T 1t6a_A 76 AGEETFIDIALPPGATHGDKGKANE-FSKWLAKTLG---GELHLFSG 118 (126)
T ss_dssp ETTEEEEEEECCTTCCHHHHHHHHH-HHHHHHHHHC---EEEECTTS
T ss_pred cCCcceEEEECCCCCCcCcchhHHH-HHHHHHHHhh---hheeeecC
Confidence 55666788887775 589995 8999999998 67777766
No 15
>3t5s_A Gilaa.00834.A, macrophage migration inhibitory factor; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.30A {Giardia lamblia}
Probab=63.59 E-value=21 Score=24.94 Aligned_cols=43 Identities=21% Similarity=0.171 Sum_probs=30.5
Q ss_pred cccCCeEEEEEeCCC-----CcChhHHHHHHHHHhhhCCcCccEEEee
Q 033057 57 DVSDEAVGVQIDAPA-----KDGEANAALLEYMSSVLGVKRRQVSIGS 99 (128)
Q Consensus 57 ~~~~~~l~v~V~apP-----~~GkAN~eLi~~LAk~l~Vpks~I~Iv~ 99 (128)
+-.+....+.|+.-. ..-+--++|.++|.+.||||+.+|-|..
T Consensus 73 Gs~dp~a~v~i~sig~~t~e~n~~~s~~i~~~l~~~Lgi~~~riyI~f 120 (135)
T 3t5s_A 73 TSTDLCCFVDFYCIGVISQAKNPSISAAITGCLTQHFKVKPERVYISF 120 (135)
T ss_dssp TBCCSCEEEEEECCC-----CCHHHHHHHHHHHHHHHCCCGGGEEEEE
T ss_pred cccceEEEEEEEEEEEEeccCCchHHHHHHHHHHHhcccCccEEEEEe
Confidence 335667777777543 2223346788999999999999998864
No 16
>2opa_A Probable tautomerase YWHB; homohexamer, 4-oxalocrotonate tautomerase, inhibitor, 2-FLUO hydroxycinnamate, isomerase; HET: FHC; 2.40A {Bacillus subtilis} PDB: 2op8_A*
Probab=63.08 E-value=5.3 Score=23.27 Aligned_cols=22 Identities=9% Similarity=0.145 Sum_probs=17.5
Q ss_pred HHHHHHHHhhhCCcCccEEEee
Q 033057 78 AALLEYMSSVLGVKRRQVSIGS 99 (128)
Q Consensus 78 ~eLi~~LAk~l~Vpks~I~Iv~ 99 (128)
++|.+.|.+.||+|..++.|+-
T Consensus 21 ~~i~~~l~~~lg~~~~~v~V~i 42 (61)
T 2opa_A 21 EKVTEAVKETTGASEEKIVVFI 42 (61)
T ss_dssp HHHHHHHHHHHCCCGGGCEEEE
T ss_pred HHHHHHHHHHhCcCcCeEEEEE
Confidence 4566788889999999988753
No 17
>2os5_A Acemif; macrophage migration inhibitory factor, cytokine, nematode,; 1.60A {Ancylostoma ceylanicum} PDB: 3rf4_A* 3rf5_A*
Probab=62.31 E-value=18 Score=24.18 Aligned_cols=56 Identities=11% Similarity=0.230 Sum_probs=34.3
Q ss_pred EEEEecCCCccccccccCCeEEEEEeCCC-CcChhHH----HHHHHHHhhhCCcCccEEEee
Q 033057 43 TIHAKPGSKSCSITDVSDEAVGVQIDAPA-KDGEANA----ALLEYMSSVLGVKRRQVSIGS 99 (128)
Q Consensus 43 ~I~VkP~Ak~~~I~~~~~~~l~v~V~apP-~~GkAN~----eLi~~LAk~l~Vpks~I~Iv~ 99 (128)
.|.+.|+..- .+.+-.+....|.|+.-+ ..-+.|+ +|.++|.+.||+|+.+|-|.-
T Consensus 39 ~v~~~~~~~~-~~~g~~~~~~~i~I~~~~g~~~eqk~~l~~~i~~~l~~~lgi~~~~v~I~~ 99 (119)
T 2os5_A 39 AIEVLAGQRI-THGASRNPVAVIKVESIGALSADDNIRHTQKITQFCQDTLKLPKDKVIITY 99 (119)
T ss_dssp EEEEECSCCC-CBTTBCSSCEEEEEEESSCCCHHHHHHHHHHHHHHHHHHHCCCGGGEEEEE
T ss_pred EEEEECCccE-EEcCCCCCeEEEEEEEecCCCHHHHHHHHHHHHHHHHHHhCcCcccEEEEE
Confidence 3444554322 122334667777777554 3344554 456678889999999998864
No 18
>1otf_A 4-oxalocrotonate tautomerase; isomerase; 1.90A {Pseudomonas SP} SCOP: d.80.1.1 PDB: 4otc_A 4ota_A 4otb_A 1bjp_A 2fm7_A
Probab=62.05 E-value=5.6 Score=23.17 Aligned_cols=23 Identities=17% Similarity=0.092 Sum_probs=18.2
Q ss_pred HHHHHHHHHhhhCCcCccEEEee
Q 033057 77 NAALLEYMSSVLGVKRRQVSIGS 99 (128)
Q Consensus 77 N~eLi~~LAk~l~Vpks~I~Iv~ 99 (128)
-++|.+.|.+.||+|..++.|+-
T Consensus 20 ~~~i~~~l~~~lg~p~~~v~v~i 42 (62)
T 1otf_A 20 IRQVSEAMANSLDAPLERVRVLI 42 (62)
T ss_dssp HHHHHHHHHHHHTCCGGGCEEEE
T ss_pred HHHHHHHHHHHhCcCcccEEEEE
Confidence 35667788899999999988753
No 19
>2aal_A Malonate semialdehyde decarboxylase; tautomerase superfamily, beta-alpha-beta, homotrimeric, LYAS; 1.65A {Pseudomonas pavonaceae} SCOP: d.80.1.6 PDB: 2aag_A 2aaj_A
Probab=57.08 E-value=42 Score=22.65 Aligned_cols=44 Identities=11% Similarity=0.141 Sum_probs=30.8
Q ss_pred cCCeEEEEEeCCCCcChhHHHHH----HHHHhhhCCcCccEEEeecCC
Q 033057 59 SDEAVGVQIDAPAKDGEANAALL----EYMSSVLGVKRRQVSIGSGSK 102 (128)
Q Consensus 59 ~~~~l~v~V~apP~~GkAN~eLi----~~LAk~l~Vpks~I~Iv~G~~ 102 (128)
.+..+.|.|+.....-+.+++|+ +.|++.||+++.+|.|.--..
T Consensus 63 ~~~~~~I~i~~~grt~eqK~~l~~~l~~~l~~~lg~~~~~v~I~i~e~ 110 (131)
T 2aal_A 63 SSAVVLLTVISRPRSEEQKVCFYKLLTGALERDCGISPDDVIVALVEN 110 (131)
T ss_dssp CTTCEEEEEEESCCCHHHHHHHHHHHHHHHHHHHCCCGGGEEEEEEEC
T ss_pred CCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHHHhCcCcccEEEEEEEc
Confidence 45678888885555555565554 567788999999998865443
No 20
>1hfo_A Migration inhibitory factor; tautomerase; 1.65A {Trichinella spiralis} SCOP: d.80.1.3
Probab=55.95 E-value=9 Score=25.30 Aligned_cols=41 Identities=15% Similarity=0.202 Sum_probs=28.8
Q ss_pred cCCeEEEEEeCCC-CcChhHHH----HHHHHHhhhCCcCccEEEee
Q 033057 59 SDEAVGVQIDAPA-KDGEANAA----LLEYMSSVLGVKRRQVSIGS 99 (128)
Q Consensus 59 ~~~~l~v~V~apP-~~GkAN~e----Li~~LAk~l~Vpks~I~Iv~ 99 (128)
.+....|.|+... ..-..|++ |.++|.+.||+|+.+|-|.-
T Consensus 53 ~~~~~~i~i~~~~g~~~eqk~~l~~~i~~~l~~~lgi~~~~v~I~~ 98 (113)
T 1hfo_A 53 TNPAAFGTLMSIGGIEPSRNRDHSAKLFDHLNTKLGIPKNRMYIHF 98 (113)
T ss_dssp CSSCEEEEEEESSSCSHHHHHHHHHHHHHHHHHHHCCCGGGEEEEE
T ss_pred CCCeEEEEEEEecCCCHHHHHHHHHHHHHHHHHHhCcCcCeEEEEE
Confidence 4667777777555 33445544 55678889999999998864
No 21
>2x4k_A 4-oxalocrotonate tautomerase; isomerase; 1.10A {Staphylococcus aureus}
Probab=55.56 E-value=8.6 Score=22.13 Aligned_cols=37 Identities=14% Similarity=0.223 Sum_probs=23.6
Q ss_pred eEEEEEeCCCCc---ChhHHHHHHHHHhhhCCcCccEEEe
Q 033057 62 AVGVQIDAPAKD---GEANAALLEYMSSVLGVKRRQVSIG 98 (128)
Q Consensus 62 ~l~v~V~apP~~---GkAN~eLi~~LAk~l~Vpks~I~Iv 98 (128)
.+.|.+...... -+--++|.+.|++.||+|..++.+.
T Consensus 5 ~i~i~~~~g~s~e~k~~l~~~l~~~l~~~lg~p~~~v~v~ 44 (63)
T 2x4k_A 5 IVNVKLLEGRSDEQLKNLVSEVTDAVEKTTGANRQAIHVV 44 (63)
T ss_dssp EEEEEEESCCCHHHHHHHHHHHHHHHHHHHCCCGGGCEEE
T ss_pred EEEEEEcCCCCHHHHHHHHHHHHHHHHHHhCcCcccEEEE
Confidence 345555543211 1234567778889999999988764
No 22
>3m20_A 4-oxalocrotonate tautomerase, putative; DMPI, thermophIle, beta-alpha-beta, catalytic proline, isomerase; 2.37A {Archaeoglobus fulgidus}
Probab=54.76 E-value=9.6 Score=22.77 Aligned_cols=25 Identities=16% Similarity=0.248 Sum_probs=19.2
Q ss_pred HHHHHHHHhhhCCcCccEEEeecCC
Q 033057 78 AALLEYMSSVLGVKRRQVSIGSGSK 102 (128)
Q Consensus 78 ~eLi~~LAk~l~Vpks~I~Iv~G~~ 102 (128)
++|.+.+++.||+|..+|.|+-=..
T Consensus 20 ~~it~~~~~~lg~~~~~v~V~i~E~ 44 (62)
T 3m20_A 20 ERLTSVAAEIYGMDRSAITILIHEP 44 (62)
T ss_dssp HHHHHHHHHHHTCCTTSCEEEEECC
T ss_pred HHHHHHHHHHhCcCcceEEEEEEEe
Confidence 4566788899999999998865443
No 23
>4hhu_A OR280; engineered protein, PSI-biology, structural genomi unknown function; HET: AE4 PG4; 2.00A {Synthetic construct}
Probab=54.02 E-value=61 Score=23.60 Aligned_cols=65 Identities=15% Similarity=0.155 Sum_probs=49.6
Q ss_pred ccCCeEEEEEeCCCCcChhHHHHH---HHHHhhhCCcCccEEEeecCCCCceEEEEccCCHHHHHHHHhhhh
Q 033057 58 VSDEAVGVQIDAPAKDGEANAALL---EYMSSVLGVKRRQVSIGSGSKSRDKIVIVEEITPENVLNSLGKAS 126 (128)
Q Consensus 58 ~~~~~l~v~V~apP~~GkAN~eLi---~~LAk~l~Vpks~I~Iv~G~~SR~K~v~I~g~~~e~l~~~L~~~~ 126 (128)
.+++.|.|+++.-|+ +.-++|. +-|++.|++.... -+-|.-|---.++++|-+.|.+...|+++.
T Consensus 38 l~gn~l~i~itgvpe--qvrkelakeaerl~~efni~v~y--~imgsgsgvm~i~f~gddlea~ekalkemi 105 (170)
T 4hhu_A 38 LSGNRLVIVITGVPE--QVRKELAKEAERLKAEFNINVQY--QIMGSGSGVMVIVFEGDDLEALEKALKEMI 105 (170)
T ss_dssp EETTEEEEEEESCCH--HHHHHHHHHHHHHHHHHTCEEEE--EEECTTCCEEEEEEECSCHHHHHHHHHHHH
T ss_pred EeCCEEEEEEeCCcH--HHHHHHHHHHHHHHHhcceEEEE--EEEeCCceEEEEEEecCcHHHHHHHHHHHH
Confidence 357899999999998 5556654 5789999986543 234677778888999999888888777653
No 24
>3m21_A Probable tautomerase HP_0924; 4-oxalocrotonate tautomerase, catalytic proline, hexamer, BE beta, isomerase; 1.90A {Helicobacter pylori} PDB: 2orm_A
Probab=53.02 E-value=9.6 Score=23.01 Aligned_cols=26 Identities=12% Similarity=0.133 Sum_probs=20.1
Q ss_pred HHHHHHHHHhhhCCcCccEEEeecCC
Q 033057 77 NAALLEYMSSVLGVKRRQVSIGSGSK 102 (128)
Q Consensus 77 N~eLi~~LAk~l~Vpks~I~Iv~G~~ 102 (128)
=++|.+.|++.||+|+.+|.|+-=..
T Consensus 23 ~~~lt~~l~~~lg~p~~~v~V~i~e~ 48 (67)
T 3m21_A 23 IEGVSDLMVKVLNKNKASIVVIIDEV 48 (67)
T ss_dssp HHHHHHHHHHHHCCCGGGCEEEEEEC
T ss_pred HHHHHHHHHHHHCcCcccEEEEEEEe
Confidence 35677888899999999988765433
No 25
>1rm6_A 4-hydroxybenzoyl-COA reductase alpha subunit; xanthine oxidase family, dimer heterotrimers, oxidoreductase; HET: PCD FAD SF4 EPE; 1.60A {Thauera aromatica} SCOP: d.41.1.1 d.133.1.1 PDB: 1sb3_A*
Probab=52.70 E-value=23 Score=31.72 Aligned_cols=46 Identities=17% Similarity=0.201 Sum_probs=42.1
Q ss_pred cCCeEEEEEeCCCCcChhHHHHHHHHHhhhCCcCccEEEeecCCCC
Q 033057 59 SDEAVGVQIDAPAKDGEANAALLEYMSSVLGVKRRQVSIGSGSKSR 104 (128)
Q Consensus 59 ~~~~l~v~V~apP~~GkAN~eLi~~LAk~l~Vpks~I~Iv~G~~SR 104 (128)
.++.+.|..-.....-=.+..+....|+.||||..+|+++.|-|..
T Consensus 468 ~dG~v~v~~g~~e~GqG~~T~~aQiaAe~Lgip~e~V~v~~~DT~~ 513 (769)
T 1rm6_A 468 FDGGITLLTGAADIGQGSNTMASQVAAEVLGVRLSRIRVISADSAL 513 (769)
T ss_dssp TTCCEEEEECCCCSSSCHHHHHHHHHHHHHTCCGGGEEEEESBTTT
T ss_pred CCCeEEEEECCccCCCCHHHHHHHHHHHHhCCCHHHEEEecCCCCC
Confidence 4688999999999888899999999999999999999999998864
No 26
>1n62_B Carbon monoxide dehydrogenase large chain; CODH, molybdenum, molybdopterin, oxidoreductase; HET: CUB MCN FAD; 1.09A {Oligotropha carboxidovorans} SCOP: d.41.1.1 d.133.1.1 PDB: 1n5w_B* 1n61_B* 1n60_B* 1n63_B* 1zxi_B*
Probab=52.00 E-value=22 Score=32.04 Aligned_cols=46 Identities=11% Similarity=0.256 Sum_probs=42.2
Q ss_pred cCCeEEEEEeCCCCcChhHHHHHHHHHhhhCCcCccEEEeecCCCC
Q 033057 59 SDEAVGVQIDAPAKDGEANAALLEYMSSVLGVKRRQVSIGSGSKSR 104 (128)
Q Consensus 59 ~~~~l~v~V~apP~~GkAN~eLi~~LAk~l~Vpks~I~Iv~G~~SR 104 (128)
.++.+.|.+-.....-=.+..+....|+.||||..+|+++.|-|+.
T Consensus 515 ~DG~v~v~~g~~e~GqG~~T~~aQiaAe~LGip~e~V~v~~~DT~~ 560 (809)
T 1n62_B 515 PTGSVIARMGTKSQGQGHETTYAQIIATELGIPADDIMIEEGNTDT 560 (809)
T ss_dssp TTSCEEEEESCCCSSSCHHHHHHHHHHHHHTCCGGGEEEECCBTTT
T ss_pred cCCeEEEEECCCCCCCCHHHHHHHHHHHHhCCCHHHEEEecCCCCC
Confidence 4788999999999988899999999999999999999999998864
No 27
>1gyx_A YDCE, B1461, hypothetical protein YDCE; tautomerase, isomerase, complete proteo; HET: EPE; 1.35A {Escherichia coli} SCOP: d.80.1.1 PDB: 1gyj_A* 1gyy_A*
Probab=51.33 E-value=10 Score=23.59 Aligned_cols=22 Identities=23% Similarity=0.297 Sum_probs=17.6
Q ss_pred HHHHHHHHHhhhCCcCccEEEe
Q 033057 77 NAALLEYMSSVLGVKRRQVSIG 98 (128)
Q Consensus 77 N~eLi~~LAk~l~Vpks~I~Iv 98 (128)
-++|.+.|.+.||+|..++.|+
T Consensus 21 ~~~l~~~l~~~lgip~~~v~V~ 42 (76)
T 1gyx_A 21 AADITDVIIRHLNSKDSSISIA 42 (76)
T ss_dssp HHHHHHHHHHHHTCCGGGCEEE
T ss_pred HHHHHHHHHHHhCcCCceEEEE
Confidence 4566778889999999988765
No 28
>3mb2_A 4-oxalocrotonate tautomerase family enzyme - ALPH; trans-3-chloroacrylic acid dehalogenase, CAAD, dehalogenase, hydrolase; 2.41A {Chloroflexus aurantiacus}
Probab=51.22 E-value=13 Score=22.81 Aligned_cols=25 Identities=16% Similarity=0.076 Sum_probs=19.9
Q ss_pred HHHHHHHHHhhhCCcCccEEEeecC
Q 033057 77 NAALLEYMSSVLGVKRRQVSIGSGS 101 (128)
Q Consensus 77 N~eLi~~LAk~l~Vpks~I~Iv~G~ 101 (128)
-++|.+.|++.||+|..+|.|+-=.
T Consensus 21 ~~~it~~l~~~lg~p~~~v~V~i~e 45 (72)
T 3mb2_A 21 ARALSAAAAAAFDVPLAEVRLIIQE 45 (72)
T ss_dssp HHHHHHHHHHHHTCCGGGEEEEEEE
T ss_pred HHHHHHHHHHHhCCCcccEEEEEEE
Confidence 3567788899999999999886543
No 29
>1ffv_B CUTL, molybdoprotein of carbon monoxide dehydrogenase; hydrolase; HET: ARO PCD FAD; 2.25A {Hydrogenophaga pseudoflava} SCOP: d.41.1.1 d.133.1.1 PDB: 1ffu_B*
Probab=49.78 E-value=25 Score=31.68 Aligned_cols=46 Identities=9% Similarity=0.218 Sum_probs=42.0
Q ss_pred cCCeEEEEEeCCCCcChhHHHHHHHHHhhhCCcCccEEEeecCCCC
Q 033057 59 SDEAVGVQIDAPAKDGEANAALLEYMSSVLGVKRRQVSIGSGSKSR 104 (128)
Q Consensus 59 ~~~~l~v~V~apP~~GkAN~eLi~~LAk~l~Vpks~I~Iv~G~~SR 104 (128)
.++.+.|.+-.....-=.+..+....|+.||||..+|+++.|-|..
T Consensus 509 ~dG~v~v~~g~~e~GqG~~T~~aQiaAe~LGi~~e~V~v~~~DT~~ 554 (803)
T 1ffv_B 509 PTGSAIARMGTITQGQGHQTTYAQIIATELGIPSEVIQVEEGDTST 554 (803)
T ss_dssp TTSCEEEEESCCCSSSCHHHHHHHHHHHHHTCCGGGEEEECCBTTT
T ss_pred cCCeEEEEECCcCCCCCHHHHHHHHHHHHHCCCHHHEEEecCCCCC
Confidence 3688999999998888899999999999999999999999998865
No 30
>2w3s_B Xanthine dehydrogenase; XO, XDH, GOUT, iron, 2Fe-2S, iron-sulfur, oxidoreductase, purine metabolism, molybdenum cofactor, hypoxanthine; HET: MPN FAD XAN; 2.60A {Rhodobacter capsulatus} PDB: 1jrp_B* 2w3r_B* 1jro_B* 2w54_B* 2w55_B*
Probab=48.67 E-value=23 Score=31.82 Aligned_cols=46 Identities=22% Similarity=0.335 Sum_probs=41.4
Q ss_pred cCCeEEEEEeCCCCcChhHHHHHHHHHhhhCCcCccEEEeecCCCC
Q 033057 59 SDEAVGVQIDAPAKDGEANAALLEYMSSVLGVKRRQVSIGSGSKSR 104 (128)
Q Consensus 59 ~~~~l~v~V~apP~~GkAN~eLi~~LAk~l~Vpks~I~Iv~G~~SR 104 (128)
.++.+.|.+-.....-=.+..+....|+.||||..+|+|+.|-|+.
T Consensus 475 ~DG~v~v~~g~~e~GqG~~T~~aQiaAe~LGip~e~V~v~~~DT~~ 520 (777)
T 2w3s_B 475 TDGSVALNHGGTEMGQGLHAKMVQVAAAVLGIDPVQVRITATDTSK 520 (777)
T ss_dssp TTSCEEEEESCCCSSSCHHHHHHHHHHHHHTSCGGGEEECCEETTT
T ss_pred cCCeEEEEECCccCCCChhHHHHHHHHHHHCCCHHHEEEEcCCCCC
Confidence 4678889888888887789999999999999999999999998875
No 31
>3ry0_A Putative tautomerase; oxalocrotonate tautomerase family, isomerase; 1.40A {Streptomyces achromogenes}
Probab=48.56 E-value=13 Score=22.26 Aligned_cols=23 Identities=22% Similarity=0.170 Sum_probs=18.7
Q ss_pred HHHHHHHHHhhhCCcCccEEEee
Q 033057 77 NAALLEYMSSVLGVKRRQVSIGS 99 (128)
Q Consensus 77 N~eLi~~LAk~l~Vpks~I~Iv~ 99 (128)
-++|.+.|.+.||+|..++.++-
T Consensus 20 ~~~it~~~~~~lg~p~~~v~V~i 42 (65)
T 3ry0_A 20 GEALTAAAHETLGTPVEAVRVIV 42 (65)
T ss_dssp HHHHHHHHHHHHCCCGGGCEEEE
T ss_pred HHHHHHHHHHHhCcCcccEEEEE
Confidence 45677888999999999988754
No 32
>1t3q_B Quinoline 2-oxidoreductase large subunit; QOR, molybdenum, MCD; HET: FAD MCN; 1.80A {Pseudomonas putida} SCOP: d.41.1.1 d.133.1.1
Probab=48.42 E-value=26 Score=31.44 Aligned_cols=45 Identities=24% Similarity=0.311 Sum_probs=41.4
Q ss_pred cCCeEEEEEeCCCCcChhHHHHHHHHHhhhCCcCccEEEeecCCC
Q 033057 59 SDEAVGVQIDAPAKDGEANAALLEYMSSVLGVKRRQVSIGSGSKS 103 (128)
Q Consensus 59 ~~~~l~v~V~apP~~GkAN~eLi~~LAk~l~Vpks~I~Iv~G~~S 103 (128)
.++.+.|.+-.....-=.+..+....|+.||||..+|+++.|-|.
T Consensus 493 ~dG~v~v~~g~~e~GqG~~T~~aQiaAe~LGip~~~V~v~~~DT~ 537 (788)
T 1t3q_B 493 PTGKVTVTTSLASSGQGHETTLAQIAADVLGVPASDVVIQAGSTK 537 (788)
T ss_dssp TTSCEEEEESCCCSSSCHHHHHHHHHHHHHTSCGGGEEEECSBTT
T ss_pred cCCeEEEEECCcCCCCCHHHHHHHHHHHHHCCCHHHEEEecCCCC
Confidence 468899999999988889999999999999999999999999885
No 33
>3nvz_C Xanthine dehydrogenase/oxidase; hydroxylase, homodimer, xanthine oxidase, indole-3-aldehyde, oxidoreductase; HET: FAD MTE I3A; 1.60A {Bos taurus} PDB: 3ns1_C* 3etr_C* 3nvv_C* 3nvw_C* 3nrz_C* 3nvy_C* 3eub_C* 3b9j_C* 1fiq_C* 3rca_C* 3sr6_C*
Probab=46.74 E-value=21 Score=32.00 Aligned_cols=46 Identities=15% Similarity=0.173 Sum_probs=39.6
Q ss_pred cCCeEEEEEeCCCCcChhHHHHHHHHHhhhCCcCccEEEeecCCCC
Q 033057 59 SDEAVGVQIDAPAKDGEANAALLEYMSSVLGVKRRQVSIGSGSKSR 104 (128)
Q Consensus 59 ~~~~l~v~V~apP~~GkAN~eLi~~LAk~l~Vpks~I~Iv~G~~SR 104 (128)
.++.+.|.+-.....-=.+..+....|+.||||..+|+++.|-|+.
T Consensus 455 ~DG~v~v~~g~~e~GQG~~T~~aQiaAe~Lgi~~e~V~v~~~DT~~ 500 (755)
T 3nvz_C 455 TDGSVLVSHGGTEMGQGLHTKMVQVASKALKIPISKIYISETSTNT 500 (755)
T ss_dssp TTSCEEEEESCCCSSSCHHHHHHHHHHHHHTSCGGGEECCCEETTT
T ss_pred cCCeEEEEECCCCCCCCHHHHHHHHHHHHHCCCHHHEEEECCCCCC
Confidence 3678888888887766688899999999999999999999998754
No 34
>1mww_A Hypothetical protein HI1388.1; structural genomics, structure 2 function project, S2F, unknown function; HET: GLU; 2.08A {Haemophilus influenzae} SCOP: d.80.1.4
Probab=46.57 E-value=15 Score=24.82 Aligned_cols=41 Identities=20% Similarity=0.315 Sum_probs=27.9
Q ss_pred cCCeEEEEEe-CCCCcChhHH----HHHHHHHhhhCCcCccEEEee
Q 033057 59 SDEAVGVQID-APAKDGEANA----ALLEYMSSVLGVKRRQVSIGS 99 (128)
Q Consensus 59 ~~~~l~v~V~-apP~~GkAN~----eLi~~LAk~l~Vpks~I~Iv~ 99 (128)
.+..+.|.|+ -+...-+.++ +|.+.|++.||+|+.+|.|.-
T Consensus 56 ~~~~~~i~i~~~~grt~eqK~~l~~~l~~~l~~~lg~~~~~v~V~i 101 (128)
T 1mww_A 56 SDDYTVIEINLMAGRMEGTKKRLIKMLFSELEYKLGIRAHDVEITI 101 (128)
T ss_dssp CTTCEEEEEEEETTCCHHHHHHHHHHHHHHHHHHHCCCGGGEEEEE
T ss_pred CCCcEEEEEEECCCCCHHHHHHHHHHHHHHHHHHhCcChhhEEEEE
Confidence 4566777777 3334444454 455677789999999998863
No 35
>3ej9_A Alpha-subunit of trans-3-chloroacrylic acid dehal; trans-3-chloroacrylic acid dehalogenase, CAAD, dehalogenase, isomerase, hydrolase; 1.50A {Pseudomonas pavonaceae} SCOP: d.80.1.1 PDB: 3ej3_A 1s0y_A 3ej7_A
Probab=44.35 E-value=15 Score=22.95 Aligned_cols=25 Identities=24% Similarity=0.270 Sum_probs=19.7
Q ss_pred HHHHHHHHHhhhCCcCccEEEeecC
Q 033057 77 NAALLEYMSSVLGVKRRQVSIGSGS 101 (128)
Q Consensus 77 N~eLi~~LAk~l~Vpks~I~Iv~G~ 101 (128)
-++|.+.|++.||+|..+|.|+-=+
T Consensus 21 ~~~it~~l~~~lg~p~~~v~V~i~E 45 (76)
T 3ej9_A 21 SAGLLRVISEATGEPRENIFFVIRE 45 (76)
T ss_dssp HHHHHHHHHHHHCCCGGGCEEEEEE
T ss_pred HHHHHHHHHHHHCcCcccEEEEEEE
Confidence 3567788889999999998876443
No 36
>4hti_A Receptor-type tyrosine-protein phosphatase N2; phogrin, IA-2BETA, protein-tyrosine phosphatase, transmembra protein, diabetes, autoimmunity; 1.95A {Homo sapiens} PDB: 4htj_A
Probab=39.71 E-value=52 Score=22.59 Aligned_cols=61 Identities=16% Similarity=0.064 Sum_probs=41.6
Q ss_pred CeEEEEEeCCCCcChhHHHHHHHHHhhhCCcCccEEEeecCCCCceEEEEc----cCCHHHHHHHH
Q 033057 61 EAVGVQIDAPAKDGEANAALLEYMSSVLGVKRRQVSIGSGSKSRDKIVIVE----EITPENVLNSL 122 (128)
Q Consensus 61 ~~l~v~V~apP~~GkAN~eLi~~LAk~l~Vpks~I~Iv~G~~SR~K~v~I~----g~~~e~l~~~L 122 (128)
+...|-+...|..=..-..|++.||+.|+++.+...=++=.. ..=+++|. +++..++.+..
T Consensus 10 eygYIvt~~~~l~~~~G~~l~~~la~~l~l~~~~F~~isV~g-~aVTFrV~~N~~n~taadVA~~a 74 (99)
T 4hti_A 10 ARGYIVTDRDPLRPEEGRRLVEDVARLLQVPSSAFADVEVLG-PAVTFKVSANVQNVTTEDVEKAT 74 (99)
T ss_dssp CCEEEEESCSSCCHHHHHHHHHHHHHHTTCCGGGEEEEEEET-TEEEEEECCCTTCCCHHHHHHHH
T ss_pred eeEEEEECCCCCCHHHHHHHHHHHHHHhCCchhheeeeeecC-ceEEEEeccCCCCCCHHHHHHHH
Confidence 446677778888888889999999999999976644333211 22345664 46777765543
No 37
>3m63_B Ubiquitin domain-containing protein DSK2; armadillo-like repeats, UBL conjugation pathway, nucleus, phosphoprotein; HET: 1PE; 2.40A {Saccharomyces cerevisiae}
Probab=37.86 E-value=26 Score=23.06 Aligned_cols=64 Identities=16% Similarity=0.270 Sum_probs=29.8
Q ss_pred CCCCCCcceEEeCCCeEEEEEEEecCCCccccccccCCeEEEEEeCCCCcChhHHHHHHHHHhhhCCcCccEEEeecC
Q 033057 24 NDENLPSCIRLVPPSSVSITIHAKPGSKSCSITDVSDEAVGVQIDAPAKDGEANAALLEYMSSVLGVKRRQVSIGSGS 101 (128)
Q Consensus 24 ~~~~~p~~i~~~~~~~v~I~I~VkP~Ak~~~I~~~~~~~l~v~V~apP~~GkAN~eLi~~LAk~l~Vpks~I~Iv~G~ 101 (128)
.|-+.|.-....-.+++.|.|.|+.+.+.-.+ .| .|. .-=.+|-+.|++.+|+|.++..|+.+-
T Consensus 11 ~~~~~~~t~~l~l~~~m~i~I~Vk~~g~~~~l----------~v--~~~--~TV~~LK~~I~~~~gip~~~QrLi~~G 74 (101)
T 3m63_B 11 SDYDIPTTENLYFQGAMSLNIHIKSGQDKWEV----------NV--APE--STVLQFKEAINKANGIPVANQRLIYSG 74 (101)
T ss_dssp ------------------CCEEEECSSCCCCB----------CC--CTT--SBHHHHHHHHHHHHSCCSTTCCEEETT
T ss_pred cccCCCcceeecccCCcEEEEEEEECCEEEEE----------Ee--CCC--CCHHHHHHHHHHHHCcChHHEEEEECC
Confidence 34445544443334677788888862222222 11 121 122578889999999999999998754
No 38
>3hrd_A Nicotinate dehydrogenase large molybdopterin subunit; selenium ligand, iron, iron-sulfur, metal-binding, oxidoreductase; HET: MCN FAD; 2.20A {Eubacterium barkeri}
Probab=36.64 E-value=37 Score=28.10 Aligned_cols=35 Identities=11% Similarity=0.089 Sum_probs=28.5
Q ss_pred CCeEEEEEeCCCCcChhHHHHHHHHHhhhCCcCccEEEee
Q 033057 60 DEAVGVQIDAPAKDGEANAALLEYMSSVLGVKRRQVSIGS 99 (128)
Q Consensus 60 ~~~l~v~V~apP~~GkAN~eLi~~LAk~l~Vpks~I~Iv~ 99 (128)
++.|.|....+-. ..+...||+.||+|.++|+++.
T Consensus 198 ~g~l~v~~stQ~p-----~~~r~~vA~~Lglp~~~VrV~~ 232 (425)
T 3hrd_A 198 EGMLTVVVSTQNP-----HYDRGEVAGMLALPNSKVRIIQ 232 (425)
T ss_dssp TCCEEEEECCSCH-----HHHHHHHHHHTTCCGGGEEEEE
T ss_pred CCeEEEEECCCCH-----HHHHHHHHHHhCCChhhEEEEe
Confidence 4678888877654 3567889999999999999986
No 39
>3mb2_B 4-oxalocrotonate tautomerase family enzyme - beta; trans-3-chloroacrylic acid dehalogenase, CAAD, dehalogenase, hydrolase; 2.41A {Chloroflexus aurantiacus}
Probab=35.55 E-value=28 Score=22.74 Aligned_cols=35 Identities=14% Similarity=0.111 Sum_probs=27.0
Q ss_pred HHHHHHHHHhhhCCcCccEEEeecCCCCceEEEEc
Q 033057 77 NAALLEYMSSVLGVKRRQVSIGSGSKSRDKIVIVE 111 (128)
Q Consensus 77 N~eLi~~LAk~l~Vpks~I~Iv~G~~SR~K~v~I~ 111 (128)
=+|+-+.+++.+|.|+..|.|+--+-.+.=++-+-
T Consensus 22 aeE~T~if~evLGcpPgsV~IVi~EV~~en~l~~~ 56 (72)
T 3mb2_B 22 AAEASAIFQRVIGTPPGRLQLIIQIVSPENTLAVI 56 (72)
T ss_dssp HHHHHHHHHHHHCCCTTCCEEEEEECCGGGSGGGG
T ss_pred HHHHHHHHHHHhCCCCCcEEEEEEecCcccceeee
Confidence 46788899999999999999987666665544433
No 40
>1dgj_A Aldehyde oxidoreductase; beta half-barrel, four-helix bundle, beta barrel; HET: MCN; 2.80A {Desulfovibrio desulfuricans} SCOP: a.56.1.1 d.15.4.2 d.41.1.1 d.133.1.1
Probab=34.56 E-value=61 Score=29.58 Aligned_cols=46 Identities=17% Similarity=0.203 Sum_probs=42.2
Q ss_pred cCCeEEEEEeCCCCcChhHHHHHHHHHhhh---CCcCccEEEeecCCCC
Q 033057 59 SDEAVGVQIDAPAKDGEANAALLEYMSSVL---GVKRRQVSIGSGSKSR 104 (128)
Q Consensus 59 ~~~~l~v~V~apP~~GkAN~eLi~~LAk~l---~Vpks~I~Iv~G~~SR 104 (128)
.++.+.|.+-.....-=.+..+....|+.| |||..+|+|+.|-|..
T Consensus 642 ~DG~v~v~~g~~e~GqG~~T~~aQiaAe~L~~~Gip~~~V~v~~~DT~~ 690 (907)
T 1dgj_A 642 DDGSVTLGNSWEDHGQGADAGSLGTAHEALRPLGITPENIHLVMNDTSK 690 (907)
T ss_dssp TTSCEEEEECCCCSSSCHHHHHHHHHHHHTGGGTCCGGGEEEEESBTTT
T ss_pred CCCeEEEEECCcCCCccHHHHHHHHHHHHHhhcCCCHHHEEEecCCCCC
Confidence 478899999999998889999999999999 9999999999998864
No 41
>2kvr_A Ubiquitin carboxyl-terminal hydrolase 7; USP7, ubiquitin-like domain, UBL, ubiquitin specific protease, HOST-virus interaction, nucleus, protease; NMR {Homo sapiens}
Probab=34.39 E-value=20 Score=25.25 Aligned_cols=35 Identities=11% Similarity=0.132 Sum_probs=30.0
Q ss_pred HHHHHHHHHhhhCCcCccEEEeecCCCCceEEEEc
Q 033057 77 NAALLEYMSSVLGVKRRQVSIGSGSKSRDKIVIVE 111 (128)
Q Consensus 77 N~eLi~~LAk~l~Vpks~I~Iv~G~~SR~K~v~I~ 111 (128)
=.++...+|+.||+|..++.+-.=..-.+++++..
T Consensus 68 ~~~~~~~va~~lg~~~~~~RlW~~~~RqN~T~Rp~ 102 (130)
T 2kvr_A 68 LAEFVQSLSQTMGFPQDQIRLWPMQARSNGTKRPA 102 (130)
T ss_dssp HHHHHHHHHHHHCCCGGGCEEEECCCCBTTBCCCC
T ss_pred HHHHHHHHHHHhCCCcccEEEEEeecCCCCCCCCC
Confidence 35789999999999999999987777788888765
No 42
>3unc_A Xanthine dehydrogenase/oxidase; oxidoreductase; HET: MTE FAD SAL; 1.65A {Bos taurus} PDB: 3una_A* 3uni_A* 1v97_A* 1fo4_A* 1vdv_A* 3am9_A* 3amz_A* 3ax7_A* 3ax9_A* 3bdj_A* 1n5x_A* 2ckj_A* 2e1q_A* 3an1_A* 2e3t_A* 1wyg_A* 3b9j_B* 1fiq_B* 3b9j_A* 1fiq_A*
Probab=31.52 E-value=47 Score=31.84 Aligned_cols=46 Identities=15% Similarity=0.173 Sum_probs=39.6
Q ss_pred cCCeEEEEEeCCCCcChhHHHHHHHHHhhhCCcCccEEEeecCCCC
Q 033057 59 SDEAVGVQIDAPAKDGEANAALLEYMSSVLGVKRRQVSIGSGSKSR 104 (128)
Q Consensus 59 ~~~~l~v~V~apP~~GkAN~eLi~~LAk~l~Vpks~I~Iv~G~~SR 104 (128)
.++.+.|.+-.....-=.+..+....|+.||||..+|+|+.|-|+.
T Consensus 1025 ~DGsv~v~~g~~e~GQG~~T~~aQiaAe~LGip~e~V~v~~~DT~~ 1070 (1332)
T 3unc_A 1025 TDGSVLVSHGGTEMGQGLHTKMVQVASKALKIPISKIYISETSTNT 1070 (1332)
T ss_dssp TTSCEEEEESCCCSSSCHHHHHHHHHHHHHTSCGGGEECCCEETTT
T ss_pred CCCeEEEEECCcCCCCCHHHHHHHHHHHHhCCCHHHEEEEcCCCCC
Confidence 3678888888877766688999999999999999999999997764
No 43
>1vlb_A Aldehyde oxidoreductase; iron-sulphur cluster; HET: PCD; 1.28A {Desulfovibrio gigas} SCOP: a.56.1.1 d.15.4.2 d.41.1.1 d.133.1.1 PDB: 1sij_A* 1zcs_A* 3fah_A* 3fc4_A* 3l4p_A*
Probab=30.58 E-value=61 Score=29.58 Aligned_cols=46 Identities=13% Similarity=0.160 Sum_probs=42.0
Q ss_pred cCCeEEEEEeCCCCcChhHHHHHHHHHhhh---CCcCccEEEeecCCCC
Q 033057 59 SDEAVGVQIDAPAKDGEANAALLEYMSSVL---GVKRRQVSIGSGSKSR 104 (128)
Q Consensus 59 ~~~~l~v~V~apP~~GkAN~eLi~~LAk~l---~Vpks~I~Iv~G~~SR 104 (128)
.++.+.|.+-.....-=.+..+....|+.| |||..+|+|+.|-|..
T Consensus 640 ~DG~v~v~~g~~e~GqG~~T~~aQiaAe~L~~~Gip~~~V~v~~~DT~~ 688 (907)
T 1vlb_A 640 ADGTITVHTAWEDHGQGADIGCVGTAHEALRPMGVAPEKIKFTWPNTAT 688 (907)
T ss_dssp TTSCEEEECCCCCSSSCHHHHHHHHHHHHHGGGTCCGGGEEECCCBTTT
T ss_pred CCCeEEEEECCccCCCCHHHHHHHHHHHHHhhcCCCHHHEEEecCCCCC
Confidence 478899999999888889999999999999 9999999999998864
No 44
>3zyv_A AOH1; oxidoreductase, molybdenum cofactor; HET: MTE FAD; 2.54A {Mus musculus}
Probab=29.19 E-value=48 Score=31.62 Aligned_cols=46 Identities=15% Similarity=0.116 Sum_probs=39.3
Q ss_pred cCCeEEEEEeCCCCcChhHHHHHHHHHhhhCCcCccEEEeecCCCC
Q 033057 59 SDEAVGVQIDAPAKDGEANAALLEYMSSVLGVKRRQVSIGSGSKSR 104 (128)
Q Consensus 59 ~~~~l~v~V~apP~~GkAN~eLi~~LAk~l~Vpks~I~Iv~G~~SR 104 (128)
.++.+.|.+-.....-=.+..+....|+.||||..+|+|+.|-|++
T Consensus 1030 ~DGsv~v~~G~~e~GQG~~T~~aQiaAe~LGip~e~I~v~~~DT~~ 1075 (1335)
T 3zyv_A 1030 TDGSVLVAHGGVELGQGINTKMIQVASRELKIPMSYIHLDEMSTVT 1075 (1335)
T ss_dssp TTSCEEECBSCCCSSSCHHHHHHHHHHHHHTSCGGGEEECCEETTT
T ss_pred CCCcEEEEECCcCCCCchhHHHHHHHHHHhCCCHHHEEEecCCcCC
Confidence 3577778877777776688999999999999999999999998865
No 45
>3n4h_A Putative tautomerase; CG10062, CIS-3-chloroacrylic acid dehalogenase, tautomerase superfamily, beta-alpha-beta motif, hydrolase; HET: PR7; 2.02A {Corynebacterium glutamicum} PDB: 3n4d_A* 3n4g_A
Probab=27.32 E-value=46 Score=23.01 Aligned_cols=43 Identities=14% Similarity=0.185 Sum_probs=26.7
Q ss_pred CeEEEEEeCCC-CcChhHH----HHHHHHHhhhCCcCccEEEeecCCC
Q 033057 61 EAVGVQIDAPA-KDGEANA----ALLEYMSSVLGVKRRQVSIGSGSKS 103 (128)
Q Consensus 61 ~~l~v~V~apP-~~GkAN~----eLi~~LAk~l~Vpks~I~Iv~G~~S 103 (128)
+.+.|.|.... ..-..++ +|.+.|++.||+|..++.|+--...
T Consensus 61 ~~~~I~i~~~~Grt~eqk~~l~~~l~~~l~~~lgi~~~~v~V~i~E~~ 108 (148)
T 3n4h_A 61 NHIWVQATIRSGRTEKQKEELLLRLTQEIALILGIPNEEVWVYITEIP 108 (148)
T ss_dssp TCEEEEEEEESCCCHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEEEEC
T ss_pred cEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHhCcCcCcEEEEEEEcC
Confidence 44555554432 2233444 4566778889999999988754443
No 46
>2daf_A FLJ35834 protein; hypothetical protein FLJ35834, ubiquitin-like domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=26.75 E-value=51 Score=23.25 Aligned_cols=24 Identities=21% Similarity=0.295 Sum_probs=21.9
Q ss_pred HHHHHHHHhhhCCcCccEEEeecC
Q 033057 78 AALLEYMSSVLGVKRRQVSIGSGS 101 (128)
Q Consensus 78 ~eLi~~LAk~l~Vpks~I~Iv~G~ 101 (128)
.+|-+.||..|++|..++.|++..
T Consensus 40 ~dLKe~ls~~~~iP~e~qrLIy~G 63 (118)
T 2daf_A 40 KYLKDHFSHLLGIPHSVLQIRYSG 63 (118)
T ss_dssp HHHHHHHHHHHTCCTTTEEEEETT
T ss_pred HHHHHHHHhhhCCChHHEEEEECC
Confidence 688999999999999999999874
No 47
>3a9j_A Ubiquitin; protein complex, cytoplasm, isopeptide bond, metal-binding, zinc; 1.18A {Mus musculus} PDB: 3a1q_B 2znv_B 3a9k_A 3h7p_A 3jsv_A 3dvg_Y 3dvn_Y 3nob_A 2o6v_D* 3jw0_X 3jvz_X 3nhe_B* 1aar_A 1d3z_A 1f9j_A 1fxt_B 1g6j_A 1nbf_C 1cmx_B 1q5w_B ...
Probab=26.62 E-value=62 Score=18.88 Aligned_cols=25 Identities=8% Similarity=-0.017 Sum_probs=21.9
Q ss_pred HHHHHHHHHhhhCCcCccEEEeecC
Q 033057 77 NAALLEYMSSVLGVKRRQVSIGSGS 101 (128)
Q Consensus 77 N~eLi~~LAk~l~Vpks~I~Iv~G~ 101 (128)
=.+|-+.+++.+|+|.++..|+.+.
T Consensus 23 v~~lK~~i~~~~~i~~~~q~L~~~g 47 (76)
T 3a9j_A 23 IENVKAKIQDKEGIPPDQQRLIFAG 47 (76)
T ss_dssp HHHHHHHHHHHHCCCGGGEEEEETT
T ss_pred HHHHHHHHHHHHCcCHHHeEEEECC
Confidence 4678899999999999999999864
No 48
>1ndd_A NEDD8, protein (ubiquitin-like protein NEDD8); proteolysis, signaling protei; 1.60A {Homo sapiens} SCOP: d.15.1.1 PDB: 1r4m_I 1r4n_I* 1xt9_B 2ko3_A 3gzn_I* 2bkr_B 2nvu_I* 3dqv_A 1bt0_A
Probab=25.73 E-value=66 Score=18.76 Aligned_cols=25 Identities=12% Similarity=0.070 Sum_probs=21.9
Q ss_pred HHHHHHHHHhhhCCcCccEEEeecC
Q 033057 77 NAALLEYMSSVLGVKRRQVSIGSGS 101 (128)
Q Consensus 77 N~eLi~~LAk~l~Vpks~I~Iv~G~ 101 (128)
=.+|-+.+++.+|+|.++..|+.+-
T Consensus 23 v~~lK~~i~~~~~i~~~~q~L~~~g 47 (76)
T 1ndd_A 23 VERIKERVEEKEGIPPQQQRLIYSG 47 (76)
T ss_dssp HHHHHHHHHHHHCCCGGGEEEEETT
T ss_pred HHHHHHHHHHHHCcChHHEEEEECC
Confidence 3678899999999999999999863
No 49
>2bwf_A Ubiquitin-like protein DSK2; signaling protein, UBA, signaling proteins; 1.15A {Saccharomyces cerevisiae} SCOP: d.15.1.1 PDB: 2bwe_S
Probab=25.47 E-value=66 Score=18.98 Aligned_cols=25 Identities=8% Similarity=0.016 Sum_probs=21.9
Q ss_pred HHHHHHHHHhhhCCcCccEEEeecC
Q 033057 77 NAALLEYMSSVLGVKRRQVSIGSGS 101 (128)
Q Consensus 77 N~eLi~~LAk~l~Vpks~I~Iv~G~ 101 (128)
=.+|-+.|++.+|+|..+..|+.+.
T Consensus 26 V~~LK~~i~~~~~i~~~~qrL~~~g 50 (77)
T 2bwf_A 26 VLQFKEAINKANGIPVANQRLIYSG 50 (77)
T ss_dssp HHHHHHHHHHHHCCCGGGEEEEETT
T ss_pred HHHHHHHHHHHhCCCHHHEEEEECC
Confidence 3678899999999999999999874
No 50
>3n3k_B Ubiquitin; hydrolase, protease, thiol protease, DUB, zinc ribbon, inhibitor, ubiqu acetylation, cytoplasm, isopeptide bond, nucleus; 2.60A {Homo sapiens} SCOP: d.15.1.1
Probab=25.28 E-value=65 Score=19.40 Aligned_cols=25 Identities=8% Similarity=-0.017 Sum_probs=21.7
Q ss_pred HHHHHHHHHhhhCCcCccEEEeecC
Q 033057 77 NAALLEYMSSVLGVKRRQVSIGSGS 101 (128)
Q Consensus 77 N~eLi~~LAk~l~Vpks~I~Iv~G~ 101 (128)
=.+|-+.|++.+++|.++..|+.+-
T Consensus 26 V~~lK~~i~~~~~ip~~~qrL~~~g 50 (85)
T 3n3k_B 26 IENVKAKIQDKEGIPPDQQRLIFAG 50 (85)
T ss_dssp HHHHHHHHHHHHCCCGGGEEEEETB
T ss_pred HHHHHHHHHHHHCCCHHHEEEEECC
Confidence 3678899999999999999999853
No 51
>2kl8_A OR15; structural genomics, PSI-2, protein structure initiative, de novo protein, ferrodoxin fold; NMR {Artificial gene}
Probab=23.68 E-value=1e+02 Score=20.09 Aligned_cols=33 Identities=9% Similarity=0.232 Sum_probs=25.5
Q ss_pred cCCeEEEEEeCCCCcChhHHHHH---HHHHhhhCCcCc
Q 033057 59 SDEAVGVQIDAPAKDGEANAALL---EYMSSVLGVKRR 93 (128)
Q Consensus 59 ~~~~l~v~V~apP~~GkAN~eLi---~~LAk~l~Vpks 93 (128)
.++.|+|+++.-|+ +.-++|. +-||+.|++...
T Consensus 38 dgndleiritgvpe--qvrkelakeaerlakefnitvt 73 (85)
T 2kl8_A 38 DGNDLEIRITGVPE--QVRKELAKEAERLAKEFNITVT 73 (85)
T ss_dssp CSSCEEEEEESCCH--HHHHHHHHHHHHHHHHTCCEEE
T ss_pred cCCeeEEEEecChH--HHHHHHHHHHHHHHHhcCeEEE
Confidence 56789999999998 5555654 579999997643
No 52
>1wh0_A Ubiquitin carboxyl-terminal hydrolase 19; USP, CS domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=23.27 E-value=1.9e+02 Score=20.08 Aligned_cols=50 Identities=10% Similarity=0.005 Sum_probs=32.0
Q ss_pred cCCCCCCCCcc-eEEeCCCeEEEEEEEecCCCccccccccCCeEEEEEeCC
Q 033057 21 IKTNDENLPSC-IRLVPPSSVSITIHAKPGSKSCSITDVSDEAVGVQIDAP 70 (128)
Q Consensus 21 ~~~~~~~~p~~-i~~~~~~~v~I~I~VkP~Ak~~~I~~~~~~~l~v~V~ap 70 (128)
++.++...+.+ |.+.+.+.+.|.|.++--.+.+....+....|.|.+..+
T Consensus 12 ~~~~~~~~~r~~W~Qt~~~~V~vtI~~k~v~~~~v~V~f~~~~l~v~~~~~ 62 (134)
T 1wh0_A 12 ESMVNLAFVKNDSYEKGPDSVVVHVYVKEICRDTSRVLFREQDFTLIFQTR 62 (134)
T ss_dssp GGSEEESCCCEEEEEETTTEEEEEEECCSBCTTSCEEEECSSEEEEEECBC
T ss_pred cccccccCCCeEEEcCCCCEEEEEEEeCCCCcccCEEEEECCEEEEEEEcC
Confidence 45555544443 555534789999999643334444567788898888654
No 53
>4g9p_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; oxidoreductase, isoprenoid biosynthesis, non mevalonate PATH iron-sulphur-cluster; HET: CDI MES; 1.55A {Thermus thermophilus} PDB: 2y0f_A*
Probab=22.60 E-value=75 Score=26.86 Aligned_cols=44 Identities=11% Similarity=0.232 Sum_probs=33.7
Q ss_pred CCeEEEEEeCCCCcChhHH-HHHHHHHhhhCCcCccEEEeecCCC
Q 033057 60 DEAVGVQIDAPAKDGEANA-ALLEYMSSVLGVKRRQVSIGSGSKS 103 (128)
Q Consensus 60 ~~~l~v~V~apP~~GkAN~-eLi~~LAk~l~Vpks~I~Iv~G~~S 103 (128)
+|.++|++++.|++...++ .+-.-|=+.||++...++|++==+-
T Consensus 256 GDTIRVSLT~dP~e~~~~EV~va~~ILqslglR~~~~~iiSCPtC 300 (406)
T 4g9p_A 256 GDTIRVSLTPSPKEPRTKEVEVAQEILQALGLRAFAPEVTSCPGC 300 (406)
T ss_dssp CSEEECCBCCCTTSCTTHHHHHHHHHHHHTTSCCCSCEEEECCCC
T ss_pred chhEEeeccCCCCcccHHHHHHHHHHHHHhCCcccCCCcccCCCC
Confidence 5899999999999766555 3445567888999999888875443
No 54
>3nvz_C Xanthine dehydrogenase/oxidase; hydroxylase, homodimer, xanthine oxidase, indole-3-aldehyde, oxidoreductase; HET: FAD MTE I3A; 1.60A {Bos taurus} PDB: 3ns1_C* 3etr_C* 3nvv_C* 3nvw_C* 3nrz_C* 3nvy_C* 3eub_C* 3b9j_C* 1fiq_C* 3rca_C* 3sr6_C*
Probab=22.37 E-value=84 Score=28.03 Aligned_cols=35 Identities=9% Similarity=0.251 Sum_probs=28.6
Q ss_pred CCeEEEEEeCCCCcChhHHHHHHHHHhhhCCcCccEEEee
Q 033057 60 DEAVGVQIDAPAKDGEANAALLEYMSSVLGVKRRQVSIGS 99 (128)
Q Consensus 60 ~~~l~v~V~apP~~GkAN~eLi~~LAk~l~Vpks~I~Iv~ 99 (128)
++.|.|....+-. ..+...||+.||+|.++|+++.
T Consensus 187 ~g~l~v~~stQ~p-----~~~r~~lA~~Lglp~~~VrV~~ 221 (755)
T 3nvz_C 187 EGEMELFVSTQNA-----MKTQSFVAKMLGVPVNRILVRV 221 (755)
T ss_dssp TTCEEEEECCSCH-----HHHHHHHHHHHTCCGGGEEEEE
T ss_pred CCeEEEEECCCCH-----HHHHHHHHHHHCCCCccEEEEE
Confidence 5678888876654 3567889999999999999987
No 55
>2dzi_A Ubiquitin-like protein 4A; GDX, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=22.30 E-value=73 Score=18.97 Aligned_cols=25 Identities=24% Similarity=0.151 Sum_probs=21.7
Q ss_pred HHHHHHHHHhhhCCcCccEEEeecC
Q 033057 77 NAALLEYMSSVLGVKRRQVSIGSGS 101 (128)
Q Consensus 77 N~eLi~~LAk~l~Vpks~I~Iv~G~ 101 (128)
=.+|-+.|++.+|+|..+..|+.+.
T Consensus 30 V~~LK~~i~~~~~i~~~~qrL~~~g 54 (81)
T 2dzi_A 30 VSTLKQLVSEKLNVPVRQQRLLFKG 54 (81)
T ss_dssp HHHHHHHHHHHTCCCTTTCEEEETT
T ss_pred HHHHHHHHHHHHCcCHHHEEEEECC
Confidence 3678899999999999999999863
No 56
>1rm6_A 4-hydroxybenzoyl-COA reductase alpha subunit; xanthine oxidase family, dimer heterotrimers, oxidoreductase; HET: PCD FAD SF4 EPE; 1.60A {Thauera aromatica} SCOP: d.41.1.1 d.133.1.1 PDB: 1sb3_A*
Probab=21.96 E-value=90 Score=27.84 Aligned_cols=34 Identities=3% Similarity=0.064 Sum_probs=28.9
Q ss_pred CeEEEEEeCCCCcChhHHHHHHHHHhhhCCcCccEEEee
Q 033057 61 EAVGVQIDAPAKDGEANAALLEYMSSVLGVKRRQVSIGS 99 (128)
Q Consensus 61 ~~l~v~V~apP~~GkAN~eLi~~LAk~l~Vpks~I~Iv~ 99 (128)
+.|.|....+-. -.+...||+.||+|.++|+++.
T Consensus 205 g~l~v~~stQ~p-----~~~r~~~A~~Lglp~~~VrV~~ 238 (769)
T 1rm6_A 205 DMLTLNTTTQVP-----YYVHLKVAACLQMDSARIRVIK 238 (769)
T ss_dssp TEEEEEECCSCH-----HHHHHHHHHHHTCCGGGEEEEC
T ss_pred CeEEEEECCcCH-----HHHHHHHHHHhCCCHHHEEEEe
Confidence 789998887655 3677899999999999999986
No 57
>3gr5_A ESCC; secretin, type III secretion system, outer membrane, transport, membrane protein; 2.05A {Escherichia coli}
Probab=21.83 E-value=1.6e+02 Score=20.87 Aligned_cols=59 Identities=20% Similarity=0.202 Sum_probs=41.8
Q ss_pred ccCCeEEEEEeCCCCcChhHHHHHHHHHhhhCCcCccEEEeecCCCCceEEEEccCCHHHHHHHHhhh
Q 033057 58 VSDEAVGVQIDAPAKDGEANAALLEYMSSVLGVKRRQVSIGSGSKSRDKIVIVEEITPENVLNSLGKA 125 (128)
Q Consensus 58 ~~~~~l~v~V~apP~~GkAN~eLi~~LAk~l~Vpks~I~Iv~G~~SR~K~v~I~g~~~e~l~~~L~~~ 125 (128)
|.+..+.+.....|+ .++++.||+.+|++ |-+ +..-.-.=++++.+.+++++++.|.+.
T Consensus 11 w~~~p~s~~~~~~~v-----~~vL~~lA~~~g~n---ivv-s~~V~G~vs~rl~~~~~~q~L~~l~~~ 69 (156)
T 3gr5_A 11 LGKNEYFIITKSSPV-----RAILNDFAANYSIP---VFI-SSSVNDDFSGEIKNEKPVKVLEKLSKL 69 (156)
T ss_dssp HCSCCEEEEEEEEEH-----HHHHHHHHHHTTCC---EEE-CTTCCCEEEEEEEEECHHHHHHHHHHH
T ss_pred cCCCCEEEEEcCCCH-----HHHHHHHHHhhCCC---EEE-CCCcceEEEEEecCCCHHHHHHHHHHH
Confidence 344556666666666 78999999999974 433 332334456678889999999988764
No 58
>1iv3_A 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; isoprenoid, non-mevalonate, riken structural genomics/proteomics initiative, RSGI; 1.52A {Thermus thermophilus} SCOP: d.79.5.1 PDB: 1iv2_A 1iv4_A* 1iv1_A
Probab=21.80 E-value=1.4e+02 Score=21.89 Aligned_cols=37 Identities=14% Similarity=0.212 Sum_probs=30.4
Q ss_pred EeCCCCcChhHHHHHHHHHhhhCCcCccEEEeecCCC
Q 033057 67 IDAPAKDGEANAALLEYMSSVLGVKRRQVSIGSGSKS 103 (128)
Q Consensus 67 V~apP~~GkAN~eLi~~LAk~l~Vpks~I~Iv~G~~S 103 (128)
+.+.|.=+---+++.+.||+.|+++.++|.|..=.+.
T Consensus 99 i~q~PKi~p~~~~m~~~ia~~L~~~~~~V~vKAtT~E 135 (152)
T 1iv3_A 99 TLDRPKLGPHRKALVDSLSRLMRLPQDRIGLTFKTSE 135 (152)
T ss_dssp ECSSSCCGGGHHHHHHHHHHHHTCCGGGEEEEEECCT
T ss_pred EecCCcCHHHHHHHHHHHHHHhCCCCceEEEEEecCC
Confidence 4566777777899999999999999999999764443
No 59
>2pmp_A 2-C-methyl-D-erythritol 2,4-cyclodiphosphate SYNT; plant enzymes, MEP pathway, isoprenoid proteins, CMP, zinc IONS, lyase; HET: C5P; 2.30A {Arabidopsis thaliana}
Probab=21.73 E-value=1.4e+02 Score=22.09 Aligned_cols=37 Identities=16% Similarity=0.203 Sum_probs=30.4
Q ss_pred EeCCCCcChhHHHHHHHHHhhhCCcCccEEEeecCCC
Q 033057 67 IDAPAKDGEANAALLEYMSSVLGVKRRQVSIGSGSKS 103 (128)
Q Consensus 67 V~apP~~GkAN~eLi~~LAk~l~Vpks~I~Iv~G~~S 103 (128)
+.+.|.=+-=-+++.+.||+.|+++.++|.|..=.+.
T Consensus 102 i~q~PKi~p~~~~m~~~ia~~L~~~~~~V~vKAtT~E 138 (160)
T 2pmp_A 102 ILQRPKISPHKETIRSNLSKLLGADPSVVNLKAKTHE 138 (160)
T ss_dssp ECSSSCCGGGHHHHHHHHHHHHTCCGGGEEEEEECCT
T ss_pred EecCCcCHHHHHHHHHHHHHHHCCCcceEEEEEecCC
Confidence 4467777777899999999999999999998764443
No 60
>1s3a_A NADH-ubiquinone oxidoreductase B8 subunit; CI-B8, ndufa2, complex I; NMR {Homo sapiens} SCOP: c.47.1.22
Probab=21.31 E-value=49 Score=21.99 Aligned_cols=32 Identities=9% Similarity=0.122 Sum_probs=24.0
Q ss_pred cEEEeecCCCCceEEEEccCCHHHHHHHHhhhh
Q 033057 94 QVSIGSGSKSRDKIVIVEEITPENVLNSLGKAS 126 (128)
Q Consensus 94 ~I~Iv~G~~SR~K~v~I~g~~~e~l~~~L~~~~ 126 (128)
.|...++ ..+.|.+.+.+.+.+++.+.|....
T Consensus 67 ~i~a~Y~-~G~ek~i~l~n~s~~eI~~~l~~l~ 98 (102)
T 1s3a_A 67 KLWARYA-FGQETNVPLNNFSADQVTRALENVL 98 (102)
T ss_dssp EEEEEES-SCCEEEEECTTCCHHHHHHHHHHHH
T ss_pred EEEEEEC-CCCEEEEECCCCCHHHHHHHHHHHH
Confidence 3443333 3568999999999999999987764
No 61
>2zqe_A MUTS2 protein; alpha/beta, ATP-binding, DNA-binding, nucleotide-binding, DN protein; 1.70A {Thermus thermophilus}
Probab=21.06 E-value=79 Score=20.23 Aligned_cols=30 Identities=10% Similarity=0.073 Sum_probs=25.4
Q ss_pred ChhHHHHHHHHHhhhCCcCccEEEeecCCC
Q 033057 74 GEANAALLEYMSSVLGVKRRQVSIGSGSKS 103 (128)
Q Consensus 74 GkAN~eLi~~LAk~l~Vpks~I~Iv~G~~S 103 (128)
.+|-.+|.+||.....-....|.|+.|.-+
T Consensus 15 ~eA~~~l~~fl~~a~~~g~~~v~IIHGkG~ 44 (83)
T 2zqe_A 15 AEALLEVDQALEEARALGLSTLRLLHGKGT 44 (83)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEEEECCSTT
T ss_pred HHHHHHHHHHHHHHHHCCCCEEEEEECCCc
Confidence 368899999999998777889999999654
No 62
>1wh3_A 59 kDa 2'-5'-oligoadenylate synthetase like protein; P59 OASL, ubiquitin family, structural genomics; NMR {Homo sapiens} SCOP: d.15.1.1
Probab=20.70 E-value=99 Score=18.79 Aligned_cols=25 Identities=12% Similarity=0.158 Sum_probs=22.0
Q ss_pred HHHHHHHHHhhhCCcCccEEEeecC
Q 033057 77 NAALLEYMSSVLGVKRRQVSIGSGS 101 (128)
Q Consensus 77 N~eLi~~LAk~l~Vpks~I~Iv~G~ 101 (128)
=.+|-+.|++..++|.++..|+.+-
T Consensus 30 V~~lK~~i~~~~gi~~~~qrL~~~G 54 (87)
T 1wh3_A 30 ILGLKQQIEDQQGLPKKQQQLEFQG 54 (87)
T ss_dssp HHHHHHHHHHHTCCCTTTEEEEETT
T ss_pred HHHHHHHHHHHhCCChHHEEEEECC
Confidence 4688899999999999999999864
No 63
>3mlc_A FG41 malonate semialdehyde decarboxylase; tautomerase superfamily, malonate semialdehyde decarboxylase alpha-beta-motif; 2.22A {Coryneform bacterium} SCOP: d.80.1.0 PDB: 3mjz_A
Probab=20.65 E-value=62 Score=22.40 Aligned_cols=43 Identities=23% Similarity=0.258 Sum_probs=27.9
Q ss_pred cCCeEEEEEeCC-CCcChhH----HHHHHHHHhhhCCcCccEEEeecCC
Q 033057 59 SDEAVGVQIDAP-AKDGEAN----AALLEYMSSVLGVKRRQVSIGSGSK 102 (128)
Q Consensus 59 ~~~~l~v~V~ap-P~~GkAN----~eLi~~LAk~l~Vpks~I~Iv~G~~ 102 (128)
+++.+.|.|+-- +..-+.= ++|.+.| +.||+++.+|.|+--+.
T Consensus 62 s~~~v~I~I~~~~gRt~EqK~~L~~~it~~l-~~lg~~~~~v~V~i~E~ 109 (136)
T 3mlc_A 62 SPSVVIIHVFTQAGRTIETKQRVFAAITESL-APIGVAGSDVFIAITEN 109 (136)
T ss_dssp CSCCEEEEEEEETTCCHHHHHHHHHHHHHHH-TTTTCCGGGEEEEEEEE
T ss_pred CCCeEEEEEEECCCCCHHHHHHHHHHHHHHH-HHcCCCcccEEEEEEEc
Confidence 356677777753 3333333 3456667 78899999999875443
No 64
>1t3q_B Quinoline 2-oxidoreductase large subunit; QOR, molybdenum, MCD; HET: FAD MCN; 1.80A {Pseudomonas putida} SCOP: d.41.1.1 d.133.1.1
Probab=20.13 E-value=1e+02 Score=27.54 Aligned_cols=34 Identities=0% Similarity=0.011 Sum_probs=28.8
Q ss_pred CeEEEEEeCCCCcChhHHHHHHHHHhhhCCcCccEEEee
Q 033057 61 EAVGVQIDAPAKDGEANAALLEYMSSVLGVKRRQVSIGS 99 (128)
Q Consensus 61 ~~l~v~V~apP~~GkAN~eLi~~LAk~l~Vpks~I~Iv~ 99 (128)
+.|.|....+-. -.+...||+.||+|.++|+++.
T Consensus 215 g~l~v~~stQ~p-----~~~r~~lA~~Lglp~~~VrV~~ 248 (788)
T 1t3q_B 215 QQLILWTATQMP-----SFVRTMVAMFCAIPEHLIEVRV 248 (788)
T ss_dssp TEEEEEECCSCH-----HHHHHHHHHHHTCCGGGEEEEC
T ss_pred CEEEEEECCCCH-----HHHHHHHHHHHCCChHHEEEEe
Confidence 789998887754 3678899999999999999985
Done!