Citrus Sinensis ID: 033059


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------13
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK
cEEEEEcccccEEEEEECcccHHHHHHHHHHHHHcccccccEEEEccEEccccccccccccccccEEEccccccccccccHHHHHHHHHccccccEEccccccccccccccccccccccccccccccc
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKK**************
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MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Ubiquitin-60S ribosomal protein L40-2 Ribosomal protein L40-2 is a component of the 60S subunit of the ribosome.very confidentQ42202
Ubiquitin-60S ribosomal protein L40-1 Ribosomal protein L40-1 is a component of the 60S subunit of the ribosome.very confidentB9DHA6
Ubiquitin-60S ribosomal protein L40-1 Ribosomal protein L40-1 is a component of the 60S subunit of the ribosome.very confidentP0CH34

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 3U5E, chain m
Confidence level:very confident
Coverage over the Query: 77-128
View the alignment between query and template
View the model in PyMOL