BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033062
(128 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3H4S|E Chain E, Structure Of The Complex Of A Mitotic Kinesin With Its
Calcium Binding Regulator
Length = 135
Score = 161 bits (408), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 78/114 (68%), Positives = 94/114 (82%), Gaps = 2/114 (1%)
Query: 13 GTTSTGSEYEDLLPVMAEKLDVESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGM 72
TT ++YED+LPVMAEK+DVE FVSELC GF LLAD + LIT SLR+NS +LG+
Sbjct: 14 STTKMETKYEDMLPVMAEKMDVEEFVSELCKGFSLLADPERHLITAESLRRNSGILGI-- 71
Query: 73 DGMTKEDAEAMVREGDLDGDGALNETEFCILMVRLSPGMMQDAEAWLQKALDHQ 126
+GM+KEDA+ MVREGDLDGDGALN+TEFC+LMVRLSP MM+DAE WL+KAL +
Sbjct: 72 EGMSKEDAQGMVREGDLDGDGALNQTEFCVLMVRLSPEMMEDAETWLEKALTQE 125
>pdb|3FWB|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|E Chain E, Sac3:sus1:cdc31 Complex
pdb|3FWC|I Chain I, Sac3:sus1:cdc31 Complex
pdb|3FWC|M Chain M, Sac3:sus1:cdc31 Complex
Length = 161
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 48/84 (57%), Gaps = 3/84 (3%)
Query: 20 EYEDLLPVMAEKLDVESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKED 79
+Y+D VM EK+ + E+ F+L D +G I+ +LR+ + LG + +T E+
Sbjct: 77 KYDDFYIVMGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELG---ETLTDEE 133
Query: 80 AEAMVREGDLDGDGALNETEFCIL 103
AM+ E DLDGDG +NE EF +
Sbjct: 134 LRAMIEEFDLDGDGEINENEFIAI 157
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 52.0 bits (123), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 50/89 (56%), Gaps = 3/89 (3%)
Query: 20 EYEDLLPVMAEKLDVESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKED 79
++E+ L +M K+ E+ FRL D ++G I+ +L++ + LG + MT E+
Sbjct: 62 DFEEFLQMMTAKMGERDSREEIMKAFRLFDDDETGKISFKNLKRVAKELG---ENMTDEE 118
Query: 80 AEAMVREGDLDGDGALNETEFCILMVRLS 108
+ M+ E D DGDG +NE EF +M + S
Sbjct: 119 LQEMIDEADRDGDGEVNEEEFFRIMKKTS 147
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 52.0 bits (123), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 5/87 (5%)
Query: 20 EYEDLLPVMAEKLDVESFVSELCGGFRLLADRD-SGLITPGSLRQNSALLGMGMDGMTKE 78
++ + L +MA K+ + EL F++ DRD +GLI+ LR LG + +T +
Sbjct: 64 DFPEFLSLMARKMKEQDSEEELIEAFKVF-DRDGNGLISAAELRHVMTNLG---EKLTDD 119
Query: 79 DAEAMVREGDLDGDGALNETEFCILMV 105
+ + M+RE D+DGDG +N EF +MV
Sbjct: 120 EVDEMIREADIDGDGHINYEEFVRMMV 146
Score = 28.1 bits (61), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Query: 38 VSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREGDLDGDGALNE 97
++E F L G IT L + + +G + T+ + + M+ E D DG+G ++
Sbjct: 9 IAEFKEAFALFDKDGDGTITTKEL--GTVMRSLGQNP-TEAELQDMINEVDADGNGTIDF 65
Query: 98 TEFCILMVRLSPGMMQDAEAWLQKAL 123
EF LM R QD+E L +A
Sbjct: 66 PEFLSLMARKMKE--QDSEEELIEAF 89
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 52.0 bits (123), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 5/87 (5%)
Query: 20 EYEDLLPVMAEKLDVESFVSELCGGFRLLADRD-SGLITPGSLRQNSALLGMGMDGMTKE 78
++ + L +MA K+ + EL F++ DRD +GLI+ LR LG + +T +
Sbjct: 64 DFPEFLSLMARKMKEQDSEEELIEAFKVF-DRDGNGLISAAELRHVMTNLG---EKLTDD 119
Query: 79 DAEAMVREGDLDGDGALNETEFCILMV 105
+ + M+RE D+DGDG +N EF +MV
Sbjct: 120 EVDEMIREADIDGDGHINYEEFVRMMV 146
Score = 28.9 bits (63), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 45/95 (47%), Gaps = 6/95 (6%)
Query: 29 AEKLDVESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREGD 88
AE+L E ++E F L G IT L + + +G + T+ + + M+ E D
Sbjct: 1 AEQL-TEEQIAEFKEAFALFDKDGDGTITTKEL--GTVMRSLGQNP-TEAELQDMINEVD 56
Query: 89 LDGDGALNETEFCILMVRLSPGMMQDAEAWLQKAL 123
DG+G ++ EF LM R QD+E L +A
Sbjct: 57 ADGNGTIDFPEFLSLMARKMKE--QDSEEELIEAF 89
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 50/88 (56%), Gaps = 3/88 (3%)
Query: 20 EYEDLLPVMAEKLDVESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKED 79
E+++ L +MA+K+ EL F++ +G I+ LR ++ +G + +T E+
Sbjct: 64 EFDEFLSLMAKKVKDTDAEEELKEAFKVFDKDQNGYISASELRH--VMINLG-EKLTDEE 120
Query: 80 AEAMVREGDLDGDGALNETEFCILMVRL 107
E M++E DLDGDG +N EF +M+ +
Sbjct: 121 VEQMIKEADLDGDGQVNYEEFVKMMMTV 148
Score = 26.9 bits (58), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Query: 76 TKEDAEAMVREGDLDGDGALNETEFCILMVRLSPGMMQDAEAWLQKAL 123
T+E+ + M+ E D DG+G + EF LM + DAE L++A
Sbjct: 44 TEEELQDMISEVDADGNGTIEFDEFLSLMAKKVKDT--DAEEELKEAF 89
>pdb|1M39|A Chain A, Solution Structure Of The C-Terminal Fragment (F86-I165)
Of The Human Centrin 2 In Calcium Saturated Form
Length = 89
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 49/86 (56%), Gaps = 3/86 (3%)
Query: 23 DLLPVMAEKLDVESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEA 82
D L VM +K+ + E+ F+L D ++G I+ +L++ + LG + +T E+ +
Sbjct: 5 DFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELG---ENLTDEELQE 61
Query: 83 MVREGDLDGDGALNETEFCILMVRLS 108
M+ E D DGDG ++E EF +M + S
Sbjct: 62 MIDEADRDGDGEVSEQEFLRIMKKTS 87
>pdb|2OBH|A Chain A, Centrin-Xpc Peptide
pdb|2OBH|B Chain B, Centrin-Xpc Peptide
Length = 143
Score = 49.3 bits (116), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 49/86 (56%), Gaps = 3/86 (3%)
Query: 21 YEDLLPVMAEKLDVESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDA 80
+ D L VM +K+ + E+ F+L D ++G I+ +L++ + LG + +T E+
Sbjct: 61 FGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELG---ENLTDEEL 117
Query: 81 EAMVREGDLDGDGALNETEFCILMVR 106
+ M+ E D DGDG ++E EF +M +
Sbjct: 118 QEMIDEADRDGDGEVSEQEFLRIMKK 143
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 49.3 bits (116), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 3/86 (3%)
Query: 20 EYEDLLPVMAEKLDVESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKED 79
++ + L +MA K+ EL FR+ +G I+ LR LG + +T E+
Sbjct: 65 DFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLG---EKLTDEE 121
Query: 80 AEAMVREGDLDGDGALNETEFCILMV 105
+ M+RE D+DGDG +N EF +M+
Sbjct: 122 VDEMIREADVDGDGQINYEEFVKVMM 147
Score = 28.9 bits (63), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Query: 38 VSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREGDLDGDGALNE 97
+SE F L G IT L + + +G + T+ + + M+ E D DG+G ++
Sbjct: 10 ISEFKEAFSLFDKDGDGCITTKEL--GTVMRSLGQNP-TEAELQDMINEVDADGNGTIDF 66
Query: 98 TEFCILMVRLSPGMMQDAEAWLQKAL 123
EF LM R D+E L++A
Sbjct: 67 PEFLNLMARKMKDT--DSEEELKEAF 90
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 49.3 bits (116), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 3/86 (3%)
Query: 20 EYEDLLPVMAEKLDVESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKED 79
++ + L +MA K+ EL FR+ +G I+ LR LG + +T E+
Sbjct: 65 DFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLG---EKLTDEE 121
Query: 80 AEAMVREGDLDGDGALNETEFCILMV 105
+ M+RE D+DGDG +N EF +M+
Sbjct: 122 VDEMIREADVDGDGQINYDEFVKVMM 147
Score = 30.4 bits (67), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 6/96 (6%)
Query: 28 MAEKLDVESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREG 87
MA++L E +SE F L G IT L + + +G + T+ + + M+ E
Sbjct: 1 MADQL-TEDQISEFKEAFSLFDKDGDGCITTKEL--GTVMRSLGQNP-TEAELQDMINEV 56
Query: 88 DLDGDGALNETEFCILMVRLSPGMMQDAEAWLQKAL 123
D DG+G ++ EF LM R D+E L++A
Sbjct: 57 DADGNGTIDFPEFLNLMARKMKDT--DSEEELKEAF 90
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 48.9 bits (115), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 20 EYEDLLPVMAEKLDVESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKED 79
++ + L +MA K+ E+ FR+ +G I+ LR LG + +T E+
Sbjct: 365 DFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG---EKLTDEE 421
Query: 80 AEAMVREGDLDGDGALNETEFCILMV 105
+ M+RE D+DGDG +N EF +M
Sbjct: 422 VDEMIREADIDGDGQVNYEEFVQMMT 447
Score = 30.0 bits (66), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Query: 34 VESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREGDLDGDG 93
E ++E F L G IT L + + +G + T+ + + M+ E D DGDG
Sbjct: 306 TEEQIAEFKEAFSLFDKDGDGTITTKEL--GTVMRSLGQNP-TEAELQDMINEVDADGDG 362
Query: 94 ALNETEFCILMVR 106
++ EF +M R
Sbjct: 363 TIDFPEFLTMMAR 375
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 48.9 bits (115), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 20 EYEDLLPVMAEKLDVESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKED 79
++ + L +MA K+ E+ FR+ +G I+ LR LG + +T E+
Sbjct: 65 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLG---EKLTDEE 121
Query: 80 AEAMVREGDLDGDGALNETEFCILMV 105
+ M+RE D+DGDG +N EF +M
Sbjct: 122 VDEMIREADIDGDGQVNYEEFVTMMT 147
Score = 29.3 bits (64), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 28 MAEKLDVESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREG 87
MA++L E ++E F L G IT L + + +G + T+ + + M+ E
Sbjct: 1 MADQL-TEEQIAEFKEAFSLFDKDGDGTITTKEL--GTVMRSLGQNP-TEAELQDMINEV 56
Query: 88 DLDGDGALNETEFCILMVR 106
D DG+G ++ EF +M R
Sbjct: 57 DADGNGTIDFPEFLTMMAR 75
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 48.9 bits (115), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 20 EYEDLLPVMAEKLDVESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKED 79
++ + L +MA K+ E+ FR+ +G I+ LR LG + +T E+
Sbjct: 365 DFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG---EKLTDEE 421
Query: 80 AEAMVREGDLDGDGALNETEFCILM 104
+ M+RE D+DGDG +N EF +M
Sbjct: 422 VDEMIREADIDGDGQVNYEEFVQMM 446
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Query: 35 ESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREGDLDGDGA 94
E ++E F L G IT L + + +G + T+ + + M+ E D DG+G
Sbjct: 307 EEQIAEFKEAFSLFDKDGDGTITTKEL--GTVMRSLGQNP-TEAELQDMINEVDADGNGT 363
Query: 95 LNETEFCILMVR 106
++ EF +M R
Sbjct: 364 IDFPEFLTMMAR 375
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 48.9 bits (115), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 20 EYEDLLPVMAEKLDVESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKED 79
++ + L +MA K+ E+ FR+ +G I+ LR LG + +T E+
Sbjct: 65 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLG---EKLTDEE 121
Query: 80 AEAMVREGDLDGDGALNETEFCILMV 105
+ M+RE D+DGDG +N EF +M
Sbjct: 122 VDEMIREADIDGDGQVNYEEFVTMMT 147
Score = 29.3 bits (64), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 28 MAEKLDVESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREG 87
MA++L E ++E F L G IT L + + +G + T+ + + M+ E
Sbjct: 1 MADQL-TEEQIAEFKEAFSLFDKDGDGTITTKEL--GTVMRSLGQNP-TEAELQDMINEV 56
Query: 88 DLDGDGALNETEFCILMVR 106
D DG+G ++ EF +M R
Sbjct: 57 DADGNGTIDFPEFLTMMAR 75
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 48.9 bits (115), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 20 EYEDLLPVMAEKLDVESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKED 79
++ + L +MA K+ E+ FR+ +G I+ LR LG + +T E+
Sbjct: 364 DFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG---EKLTDEE 420
Query: 80 AEAMVREGDLDGDGALNETEFCILMV 105
+ M+RE D+DGDG +N EF +M
Sbjct: 421 VDEMIREADIDGDGQVNYEEFVQMMT 446
Score = 30.0 bits (66), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Query: 34 VESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREGDLDGDG 93
E ++E F L G IT L + + +G + T+ + + M+ E D DGDG
Sbjct: 305 TEEQIAEFKEAFSLFDKDGDGTITTKEL--GTVMRSLGQNP-TEAELQDMINEVDADGDG 361
Query: 94 ALNETEFCILMVR 106
++ EF +M R
Sbjct: 362 TIDFPEFLTMMAR 374
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 48.9 bits (115), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 20 EYEDLLPVMAEKLDVESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKED 79
++ + L +MA K+ E+ FR+ +G I+ LR LG + +T E+
Sbjct: 64 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLG---EKLTDEE 120
Query: 80 AEAMVREGDLDGDGALNETEFCILMV 105
+ M+RE D+DGDG +N EF +M
Sbjct: 121 VDEMIREADIDGDGQVNYEEFVTMMT 146
Score = 28.1 bits (61), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Query: 38 VSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREGDLDGDGALNE 97
++E F L G IT L + + +G + T+ + + M+ E D DG+G ++
Sbjct: 9 IAEFKEAFSLFDKDGDGTITTKEL--GTVMRSLGQNP-TEAELQDMINEVDADGNGTIDF 65
Query: 98 TEFCILMVR 106
EF +M R
Sbjct: 66 PEFLTMMAR 74
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 48.9 bits (115), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 20 EYEDLLPVMAEKLDVESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKED 79
++ + L +MA K+ E+ FR+ +G I+ LR LG + +T E+
Sbjct: 64 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLG---EKLTDEE 120
Query: 80 AEAMVREGDLDGDGALNETEFCILMV 105
+ M+RE D+DGDG +N EF +M
Sbjct: 121 VDEMIREADIDGDGQVNYEEFVTMMT 146
Score = 28.1 bits (61), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Query: 38 VSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREGDLDGDGALNE 97
++E F L G IT L + + +G + T+ + + M+ E D DG+G ++
Sbjct: 9 IAEFKEAFSLFDKDGDGTITTKEL--GTVMRSLGQNP-TEAELQDMINEVDADGNGTIDF 65
Query: 98 TEFCILMVR 106
EF +M R
Sbjct: 66 PEFLTMMAR 74
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 48.9 bits (115), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 20 EYEDLLPVMAEKLDVESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKED 79
++ + L +MA K+ E+ FR+ +G I+ LR LG + +T E+
Sbjct: 364 DFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG---EKLTDEE 420
Query: 80 AEAMVREGDLDGDGALNETEFCILM 104
+ M+RE D+DGDG +N EF +M
Sbjct: 421 VDEMIREADIDGDGQVNYEEFVQMM 445
Score = 30.0 bits (66), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Query: 35 ESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREGDLDGDGA 94
E ++E F L G IT L + + +G + T+ + + M+ E D DGDG
Sbjct: 306 EEQIAEFKEAFSLFDKDGDGTITTKEL--GTVMRSLGQNP-TEAELQDMINEVDADGDGT 362
Query: 95 LNETEFCILMVR 106
++ EF +M R
Sbjct: 363 IDFPEFLTMMAR 374
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 48.5 bits (114), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 20 EYEDLLPVMAEKLDVESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKED 79
++ + L +MA K+ E+ FR+ +G I+ LR LG + +T E+
Sbjct: 65 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLG---EKLTDEE 121
Query: 80 AEAMVREGDLDGDGALNETEFCILMV 105
+ M+RE D+DGDG +N EF +M
Sbjct: 122 VDEMIRESDIDGDGQVNYEEFVTMMT 147
Score = 29.3 bits (64), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 28 MAEKLDVESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREG 87
MA++L E ++E F L G IT L + + +G + T+ + + M+ E
Sbjct: 1 MADQL-TEEQIAEFKEAFSLFDKDGDGTITTKEL--GTVMRSLGQNP-TEAELQDMINEV 56
Query: 88 DLDGDGALNETEFCILMVR 106
D DG+G ++ EF +M R
Sbjct: 57 DADGNGTIDFPEFLTMMAR 75
>pdb|2GV5|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|D Chain D, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|E Chain E, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|C Chain C, Crystal Structure Of Sfi1pCDC31P COMPLEX
Length = 161
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Query: 21 YEDLLPVMAEKLDVESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDA 80
Y+D V EK+ + E+ F+L D +G I+ +LR+ + LG + +T E+
Sbjct: 78 YDDFYIVXGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELG---ETLTDEEL 134
Query: 81 EAMVREGDLDGDGALNETEFCIL 103
A + E DLDGDG +NE EF +
Sbjct: 135 RAXIEEFDLDGDGEINENEFIAI 157
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 3/86 (3%)
Query: 20 EYEDLLPVMAEKLDVESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKED 79
++ + L +MA K+ EL FR+ +G I+ LR LG + +T E+
Sbjct: 64 DFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLG---EKLTDEE 120
Query: 80 AEAMVREGDLDGDGALNETEFCILMV 105
+ M+RE D+DGDG +N EF +M+
Sbjct: 121 VDEMIREADVDGDGQVNYEEFVQVMM 146
Score = 28.1 bits (61), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Query: 38 VSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREGDLDGDGALNE 97
++E F L G IT L + + +G + T+ + + M+ E D DG+G ++
Sbjct: 9 IAEFKEAFSLFDKDGDGTITTKEL--GTVMRSLGQNP-TEAELQDMINEVDADGNGTIDF 65
Query: 98 TEFCILMVRLSPGMMQDAEAWLQKAL 123
EF LM R D+E L++A
Sbjct: 66 PEFLNLMARKMKDT--DSEEELKEAF 89
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
Query: 20 EYEDLLPVMAEKLDVESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKED 79
++E+ L +M K+ E+ FRL D +SG IT LR+ + LG + +T+E+
Sbjct: 82 DFEEFLTMMTAKMGERDSREEILKAFRLFDDDNSGTITIKDLRRVAKELG---ENLTEEE 138
Query: 80 AEAMVREGDLDGDGALNETEFCILMVRLS 108
+ M+ E D + D ++E EF +M + S
Sbjct: 139 LQEMIAEADRNDDNEIDEDEFIRIMKKTS 167
Score = 26.6 bits (57), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Query: 40 ELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREGDLDGDGALNETE 99
E+ F L SG I L+ A+ +G + KE+ + M+ E D DG G ++ E
Sbjct: 29 EIREAFDLFDTDGSGTIDAKELK--VAMRALGFEP-KKEEIKKMISEIDKDGSGTIDFEE 85
Query: 100 FCILMV 105
F +M
Sbjct: 86 FLTMMT 91
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 3/86 (3%)
Query: 20 EYEDLLPVMAEKLDVESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKED 79
++ + L +MA K+ EL FR+ +G I+ LR LG + +T E+
Sbjct: 61 DFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLG---EKLTDEE 117
Query: 80 AEAMVREGDLDGDGALNETEFCILMV 105
+ M+RE D+DGDG +N EF +M+
Sbjct: 118 VDEMIREADVDGDGQVNYEEFVQVMM 143
Score = 27.7 bits (60), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Query: 38 VSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREGDLDGDGALNE 97
++E F L G IT L + + +G + T+ + + M+ E D DG+G ++
Sbjct: 6 IAEFKEAFSLFDKDGDGTITTKEL--GTVMRSLGQNP-TEAELQDMINEVDADGNGTIDF 62
Query: 98 TEFCILMVRLSPGMMQDAEAWLQKAL 123
EF LM R D+E L++A
Sbjct: 63 PEFLNLMARKMKDT--DSEEELKEAF 86
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 20 EYEDLLPVMAEKLDVESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKED 79
++ + L +MA K+ E+ FR+ +G I+ LR LG + +T E+
Sbjct: 68 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG---EKLTDEE 124
Query: 80 AEAMVREGDLDGDGALNETEFCILMV 105
+ M+RE D+DGDG +N EF +M
Sbjct: 125 VDEMIREADIDGDGQVNYEEFVQMMT 150
Score = 29.6 bits (65), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 28 MAEKLDVESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREG 87
MA++L E ++E F L G IT L + + +G + T+ + + M+ E
Sbjct: 4 MADQL-TEEQIAEFKEAFSLFDKDGDGTITTKEL--GTVMRSLGQNP-TEAELQDMINEV 59
Query: 88 DLDGDGALNETEFCILMVR 106
D DG+G ++ EF +M R
Sbjct: 60 DADGNGTIDFPEFLTMMAR 78
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 20 EYEDLLPVMAEKLDVESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKED 79
++ + L +MA K+ E+ FR+ +G I+ LR LG + +T E+
Sbjct: 65 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG---EKLTDEE 121
Query: 80 AEAMVREGDLDGDGALNETEFCILMV 105
+ M+RE D+DGDG +N EF +M
Sbjct: 122 VDQMIREADIDGDGQVNYEEFVQMMT 147
Score = 29.6 bits (65), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 28 MAEKLDVESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREG 87
MA++L E ++E F L G IT L + + +G + T+ + + M+ E
Sbjct: 1 MADQL-TEEQIAEFKEAFSLFDKDGDGTITTKEL--GTVMRSLGQNP-TEAELQDMINEV 56
Query: 88 DLDGDGALNETEFCILMVR 106
D DG+G ++ EF +M R
Sbjct: 57 DADGNGTIDFPEFLTMMAR 75
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 20 EYEDLLPVMAEKLDVESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKED 79
++ + L +MA K+ E+ FR+ +G I+ LR LG + +T E+
Sbjct: 66 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG---EKLTDEE 122
Query: 80 AEAMVREGDLDGDGALNETEFCILMV 105
+ M+RE D+DGDG +N EF +M
Sbjct: 123 VDEMIREADIDGDGQVNYEEFVQMMT 148
Score = 29.6 bits (65), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 28 MAEKLDVESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREG 87
MA++L E ++E F L G IT L + + +G + T+ + + M+ E
Sbjct: 2 MADQL-TEEQIAEFKEAFSLFDKDGDGTITTKEL--GTVMRSLGQNP-TEAELQDMINEV 57
Query: 88 DLDGDGALNETEFCILMVR 106
D DG+G ++ EF +M R
Sbjct: 58 DADGNGTIDFPEFLTMMAR 76
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 20 EYEDLLPVMAEKLDVESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKED 79
++ + L +MA K+ E+ FR+ +G I+ LR LG + +T E+
Sbjct: 365 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG---EKLTDEE 421
Query: 80 AEAMVREGDLDGDGALNETEFCILMV 105
+ M+RE D+DGDG +N EF +M
Sbjct: 422 VDEMIREADIDGDGQVNYEEFVQMMT 447
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Query: 34 VESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREGDLDGDG 93
E ++E F L G IT L + + +G + T+ + + M+ E D DG+G
Sbjct: 306 TEEQIAEFKEAFSLFDKDGDGTITTKEL--GTVMRSLGQNP-TEAELQDMINEVDADGNG 362
Query: 94 ALNETEFCILMVR 106
++ EF +M R
Sbjct: 363 TIDFPEFLTMMAR 375
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 20 EYEDLLPVMAEKLDVESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKED 79
++ + L +MA K+ E+ FR+ +G I+ LR LG + +T E+
Sbjct: 65 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG---EKLTDEE 121
Query: 80 AEAMVREGDLDGDGALNETEFCILM 104
+ M+RE D+DGDG +N EF +M
Sbjct: 122 VDEMIREADIDGDGQVNYEEFVQMM 146
Score = 29.3 bits (64), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 28 MAEKLDVESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREG 87
MA++L E ++E F L G IT L + + +G + T+ + + M+ E
Sbjct: 1 MADQL-TEEQIAEFKEAFSLFDKDGDGTITTKEL--GTVMRSLGQNP-TEAELQDMINEV 56
Query: 88 DLDGDGALNETEFCILMVR 106
D DG+G ++ EF +M R
Sbjct: 57 DADGNGTIDFPEFLTMMAR 75
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 20 EYEDLLPVMAEKLDVESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKED 79
++ + L +MA K+ E+ FR+ +G I+ LR LG + +T E+
Sbjct: 65 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG---EKLTDEE 121
Query: 80 AEAMVREGDLDGDGALNETEFCILMV 105
+ M+RE D+DGDG +N EF +M
Sbjct: 122 VDEMIREADIDGDGQVNYEEFVQMMT 147
Score = 29.6 bits (65), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 28 MAEKLDVESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREG 87
MA++L E ++E F L G IT L + + +G + T+ + + M+ E
Sbjct: 1 MADQL-TEEQIAEFKEAFSLFDKDGDGTITTKEL--GTVMRSLGQNP-TEAELQDMINEV 56
Query: 88 DLDGDGALNETEFCILMVR 106
D DG+G ++ EF +M R
Sbjct: 57 DADGNGTIDFPEFLTMMAR 75
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 20 EYEDLLPVMAEKLDVESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKED 79
++ + L +MA K+ E+ FR+ +G I+ LR LG + +T E+
Sbjct: 365 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG---EKLTDEE 421
Query: 80 AEAMVREGDLDGDGALNETEFCILMV 105
+ M+RE D+DGDG +N EF +M
Sbjct: 422 VDEMIREADIDGDGQVNYEEFVQMMT 447
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Query: 34 VESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREGDLDGDG 93
E ++E F L G IT L + + +G + T+ + + M+ E D DG+G
Sbjct: 306 TEEQIAEFKEAFSLFDKDGDGTITTKEL--GTVMRSLGQNP-TEAELQDMINEVDADGNG 362
Query: 94 ALNETEFCILMVR 106
++ EF +M R
Sbjct: 363 TIDFPEFLTMMAR 375
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 20 EYEDLLPVMAEKLDVESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKED 79
++ + L +MA K+ E+ FR+ +G I+ LR LG + +T E+
Sbjct: 366 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG---EKLTDEE 422
Query: 80 AEAMVREGDLDGDGALNETEFCILMV 105
+ M+RE D+DGDG +N EF +M
Sbjct: 423 VDEMIREADIDGDGQVNYEEFVQMMT 448
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Query: 34 VESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREGDLDGDG 93
E ++E F L G IT L + + +G + T+ + + M+ E D DG+G
Sbjct: 307 TEEQIAEFKEAFSLFDKDGDGTITTKEL--GTVMRSLGQNP-TEAELQDMINEVDADGNG 363
Query: 94 ALNETEFCILMVR 106
++ EF +M R
Sbjct: 364 TIDFPEFLTMMAR 376
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 20 EYEDLLPVMAEKLDVESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKED 79
++ + L +MA K+ E+ FR+ +G I+ LR LG + +T E+
Sbjct: 62 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG---EKLTDEE 118
Query: 80 AEAMVREGDLDGDGALNETEFCILMV 105
+ M+RE D+DGDG +N EF +M
Sbjct: 119 VDEMIREADIDGDGQVNYEEFVQMMT 144
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Query: 34 VESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREGDLDGDG 93
E ++E F L G IT L + + +G + T+ + + M+ E D DG+G
Sbjct: 3 TEEQIAEFKEAFSLFDKDGDGTITTKEL--GTVMRSLGQNP-TEAELQDMINEVDADGNG 59
Query: 94 ALNETEFCILMVR 106
++ EF +M R
Sbjct: 60 TIDFPEFLTMMAR 72
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 20 EYEDLLPVMAEKLDVESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKED 79
++ + L +MA K+ E+ FR+ +G I+ LR LG + +T E+
Sbjct: 364 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG---EKLTDEE 420
Query: 80 AEAMVREGDLDGDGALNETEFCILMV 105
+ M+RE D+DGDG +N EF +M
Sbjct: 421 VDEMIREADIDGDGQVNYEEFVQMMT 446
Score = 30.0 bits (66), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Query: 34 VESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREGDLDGDG 93
E ++E F L G IT L + + +G + T+ + + M+ E D DGDG
Sbjct: 305 TEEQIAEFKEAFSLFDKDGDGTITTKEL--GTVMRSLGQNP-TEAELQDMINEVDADGDG 361
Query: 94 ALNETEFCILMVR 106
++ EF +M R
Sbjct: 362 TIDFPEFLTMMAR 374
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 20 EYEDLLPVMAEKLDVESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKED 79
++ + L +MA K+ E+ FR+ +G I+ LR LG + +T E+
Sbjct: 70 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG---EKLTDEE 126
Query: 80 AEAMVREGDLDGDGALNETEFCILMV 105
+ M+RE D+DGDG +N EF +M
Sbjct: 127 VDEMIREADIDGDGQVNYEEFVQMMT 152
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Query: 34 VESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREGDLDGDG 93
E ++E F L G IT L + + +G + T+ + + M+ E D DG+G
Sbjct: 11 TEEQIAEFKEAFSLFDKDGDGTITTKEL--GTVMRSLGQNP-TEAELQDMINEVDADGNG 67
Query: 94 ALNETEFCILMVR 106
++ EF +M R
Sbjct: 68 TIDFPEFLTMMAR 80
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 20 EYEDLLPVMAEKLDVESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKED 79
++ + L +MA K+ E+ FR+ +G I+ LR LG + +T E+
Sbjct: 64 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG---EKLTDEE 120
Query: 80 AEAMVREGDLDGDGALNETEFCILMV 105
+ M+RE D+DGDG +N EF +M
Sbjct: 121 VDEMIREADIDGDGQVNYEEFVQMMT 146
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Query: 34 VESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREGDLDGDG 93
E ++E F L G IT L + + +G + T+ + + M+ E D DG+G
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKEL--GTVMRSLGQNP-TEAELQDMINEVDADGNG 61
Query: 94 ALNETEFCILMVR 106
++ EF +M R
Sbjct: 62 TIDFPEFLTMMAR 74
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 20 EYEDLLPVMAEKLDVESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKED 79
++ + L +MA K+ E+ FR+ +G I+ LR LG + +T E+
Sbjct: 62 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG---EKLTDEE 118
Query: 80 AEAMVREGDLDGDGALNETEFCILMV 105
+ M+RE D+DGDG +N EF +M
Sbjct: 119 VDEMIREADIDGDGQVNYEEFVQMMT 144
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Query: 34 VESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREGDLDGDG 93
E ++E F L G IT L + + +G + T+ + + M+ E D DG+G
Sbjct: 3 TEEQIAEFKEAFSLFDKDGDGTITTKEL--GTVMRSLGQNP-TEAELQDMINEVDADGNG 59
Query: 94 ALNETEFCILMVR 106
++ EF +M R
Sbjct: 60 TIDFPEFLTMMAR 72
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 20 EYEDLLPVMAEKLDVESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKED 79
++ + L +MA K+ E+ FR+ +G I+ LR LG + +T E+
Sbjct: 65 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG---EKLTDEE 121
Query: 80 AEAMVREGDLDGDGALNETEFCILMV 105
+ M+RE D+DGDG +N EF +M
Sbjct: 122 VDEMIREADIDGDGQVNYEEFVQMMT 147
Score = 29.6 bits (65), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 28 MAEKLDVESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREG 87
MA++L E ++E F L G IT L + + +G + T+ + + M+ E
Sbjct: 1 MADQL-TEEQIAEFKEAFSLFDKDGDGTITTKEL--GTVMRSLGQNP-TEAELQDMINEV 56
Query: 88 DLDGDGALNETEFCILMVR 106
D DG+G ++ EF +M R
Sbjct: 57 DADGNGTIDFPEFLTMMAR 75
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 20 EYEDLLPVMAEKLDVESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKED 79
++ + L +MA K+ E+ FR+ +G I+ LR LG + +T E+
Sbjct: 62 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG---EKLTDEE 118
Query: 80 AEAMVREGDLDGDGALNETEFCILMV 105
+ M+RE D+DGDG +N EF +M
Sbjct: 119 VDEMIREADIDGDGQVNYEEFVQMMT 144
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Query: 34 VESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREGDLDGDG 93
E ++E F L G IT L + + +G + T+ + + M+ E D DG+G
Sbjct: 3 TEEQIAEFKEAFSLFDKDGDGTITTKEL--GTVMRSLGQNP-TEAELQDMINEVDADGNG 59
Query: 94 ALNETEFCILMVR 106
++ EF +M R
Sbjct: 60 TIDFPEFLTMMAR 72
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 20 EYEDLLPVMAEKLDVESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKED 79
++ + L +MA K+ E+ FR+ +G I+ LR LG + +T E+
Sbjct: 65 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG---EKLTDEE 121
Query: 80 AEAMVREGDLDGDGALNETEFCILMV 105
+ M+RE D+DGDG +N EF +M
Sbjct: 122 VDEMIREADIDGDGQVNYEEFVQMMT 147
Score = 29.6 bits (65), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 28 MAEKLDVESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREG 87
MA++L E ++E F L G IT L + + +G + T+ + + M+ E
Sbjct: 1 MADQL-TEEQIAEFKEAFSLFDKDGDGTITTKEL--GTVMRSLGQNP-TEAELQDMINEV 56
Query: 88 DLDGDGALNETEFCILMVR 106
D DG+G ++ EF +M R
Sbjct: 57 DADGNGTIDFPEFLTMMAR 75
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 20 EYEDLLPVMAEKLDVESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKED 79
++ + L +MA K+ E+ FR+ +G I+ LR LG + +T E+
Sbjct: 60 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG---EKLTDEE 116
Query: 80 AEAMVREGDLDGDGALNETEFCILMV 105
+ M+RE D+DGDG +N EF +M
Sbjct: 117 VDEMIREADIDGDGQVNYEEFVQMMT 142
Score = 28.1 bits (61), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Query: 34 VESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREGDLDGDG 93
E ++E F L G IT L + + +G + T+ + + M+ E D DG+G
Sbjct: 1 TEEQIAEFKEAFSLFDKDGDGTITTKEL--GTVMRSLGQNP-TEAELQDMINEVDADGNG 57
Query: 94 ALNETEFCILMVR 106
++ EF +M R
Sbjct: 58 TIDFPEFLTMMAR 70
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 20 EYEDLLPVMAEKLDVESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKED 79
++ + L +MA K+ E+ FR+ +G I+ LR LG + +T E+
Sbjct: 64 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG---EKLTDEE 120
Query: 80 AEAMVREGDLDGDGALNETEFCILMV 105
+ M+RE D+DGDG +N EF +M
Sbjct: 121 VDEMIREADIDGDGQVNYEEFVQMMT 146
Score = 28.1 bits (61), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Query: 34 VESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREGDLDGDG 93
E ++E F L G IT L + + +G + T+ + + M+ E D DG+G
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKEL--GTVMRSLGQNP-TEAELQDMINEVDADGNG 61
Query: 94 ALNETEFCILMVR 106
++ EF +M R
Sbjct: 62 TIDFPEFLTMMAR 74
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 20 EYEDLLPVMAEKLDVESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKED 79
++ + L +MA K+ E+ FR+ +G I+ LR LG + +T E+
Sbjct: 328 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG---EKLTDEE 384
Query: 80 AEAMVREGDLDGDGALNETEFCILMV 105
+ M+RE D+DGDG +N EF +M
Sbjct: 385 VDEMIREADIDGDGQVNYEEFVQMMT 410
Score = 28.5 bits (62), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Query: 34 VESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREGDLDGDG 93
E ++E F L G IT L + + +G + T+ + + M+ E D DG+G
Sbjct: 269 TEEQIAEFKEAFSLFDKDGDGTITTKEL--GTVMRSLGQNP-TEAELQDMINEVDADGNG 325
Query: 94 ALNETEFCILMVR 106
++ EF +M R
Sbjct: 326 TIDFPEFLTMMAR 338
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 20 EYEDLLPVMAEKLDVESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKED 79
++ + L +MA K+ E+ FR+ +G I+ LR LG + +T E+
Sbjct: 65 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG---EXLTDEE 121
Query: 80 AEAMVREGDLDGDGALNETEFCILMV 105
+ M+RE D+DGDG +N EF +M
Sbjct: 122 VDEMIREADIDGDGQVNYEEFVQMMT 147
Score = 28.1 bits (61), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Query: 34 VESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREGDLDGDG 93
E ++E F L G IT L + + +G + T+ + + M+ E D DG+G
Sbjct: 6 TEEQIAEFKEAFSLFDKDGDGTITTKEL--GTVMRSLGQNP-TEAELQDMINEVDADGNG 62
Query: 94 ALNETEFCILMVR 106
++ EF +M R
Sbjct: 63 TIDFPEFLTMMAR 75
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 20 EYEDLLPVMAEKLDVESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKED 79
++ + L +MA K+ E+ FR+ +G I+ LR LG + +T E+
Sbjct: 64 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG---EXLTDEE 120
Query: 80 AEAMVREGDLDGDGALNETEFCILMV 105
+ M+RE D+DGDG +N EF +M
Sbjct: 121 VDEMIREADIDGDGQVNYEEFVQMMT 146
Score = 28.1 bits (61), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Query: 34 VESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREGDLDGDG 93
E ++E F L G IT L + + +G + T+ + + M+ E D DG+G
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKEL--GTVMRSLGQNP-TEAELQDMINEVDADGNG 61
Query: 94 ALNETEFCILMVR 106
++ EF +M R
Sbjct: 62 TIDFPEFLTMMAR 74
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 20 EYEDLLPVMAEKLDVESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKED 79
++ + L +MA K+ E+ FR+ +G I+ LR LG + +T E+
Sbjct: 61 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG---EKLTDEE 117
Query: 80 AEAMVREGDLDGDGALNETEFCILMV 105
+ M+RE D+DGDG +N EF +M
Sbjct: 118 VDEMIREADIDGDGQVNYEEFVQMMT 143
Score = 28.1 bits (61), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Query: 38 VSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREGDLDGDGALNE 97
++E F L G IT L + + +G + T+ + + M+ E D DG+G ++
Sbjct: 6 IAEFKEAFSLFDKDGDGTITTKEL--GTVMRSLGQNP-TEAELQDMINEVDADGNGTIDF 62
Query: 98 TEFCILMVR 106
EF +M R
Sbjct: 63 PEFLTMMAR 71
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 20 EYEDLLPVMAEKLDVESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKED 79
++ + L +MA K+ E+ FR+ +G I+ LR LG + +T E+
Sbjct: 64 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG---EKLTDEE 120
Query: 80 AEAMVREGDLDGDGALNETEFCILMV 105
+ M+RE D+DGDG +N EF +M
Sbjct: 121 VDEMIREADIDGDGQVNYEEFVQMMT 146
Score = 30.0 bits (66), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Query: 34 VESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREGDLDGDG 93
E ++E F L G IT L + + +G + T+ + + M+ E D DGDG
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKEL--GTVMRSLGQNP-TEAELQDMINEVDADGDG 61
Query: 94 ALNETEFCILMVR 106
++ EF +M R
Sbjct: 62 TIDFPEFLTMMAR 74
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 20 EYEDLLPVMAEKLDVESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKED 79
++ + L +MA K+ E+ FR+ +G I+ LR LG + +T E+
Sbjct: 331 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG---EKLTDEE 387
Query: 80 AEAMVREGDLDGDGALNETEFCILM 104
+ M+RE D+DGDG +N EF +M
Sbjct: 388 VDEMIREADIDGDGQVNYEEFVQMM 412
Score = 28.5 bits (62), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Query: 35 ESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREGDLDGDGA 94
E ++E F L G IT L + + +G + T+ + + M+ E D DG+G
Sbjct: 273 EEQIAEFKEAFSLFDKDGDGTITTKEL--GTVMRSLGQNP-TEAELQDMINEVDADGNGT 329
Query: 95 LNETEFCILMVR 106
++ EF +M R
Sbjct: 330 IDFPEFLTMMAR 341
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 20 EYEDLLPVMAEKLDVESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKED 79
++ + L +MA K+ E+ FR+ +G I+ LR LG + +T E+
Sbjct: 63 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG---EKLTDEE 119
Query: 80 AEAMVREGDLDGDGALNETEFCILMV 105
+ M+RE D+DGDG +N EF +M
Sbjct: 120 VDEMIREADIDGDGQVNYEEFVQMMT 145
Score = 28.1 bits (61), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Query: 34 VESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREGDLDGDG 93
E ++E F L G IT L + + +G + T+ + + M+ E D DG+G
Sbjct: 4 TEEQIAEFKEAFSLFDKDGDGTITTKEL--GTVMRSLGQNP-TEAELQDMINEVDADGNG 60
Query: 94 ALNETEFCILMVR 106
++ EF +M R
Sbjct: 61 TIDFPEFLTMMAR 73
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 20 EYEDLLPVMAEKLDVESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKED 79
++ + L +MA K+ E+ FR+ +G I+ LR LG + +T E+
Sbjct: 356 DFPEFLIMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG---EKLTDEE 412
Query: 80 AEAMVREGDLDGDGALNETEFCILM 104
+ M+RE D+DGDG +N EF +M
Sbjct: 413 VDEMIREADIDGDGQVNYEEFVQMM 437
Score = 32.0 bits (71), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Query: 38 VSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREGDLDGDGALNE 97
++E F L G IT L + + +G + T+ + + M+ E D DGDG ++
Sbjct: 301 IAEFKEAFSLFDKDGDGTITTKEL--GTVMRSLGQNP-TEAELQDMINEVDADGDGTIDF 357
Query: 98 TEFCILMVR 106
EF I+M R
Sbjct: 358 PEFLIMMAR 366
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 20 EYEDLLPVMAEKLDVESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKED 79
++ + L +MA K+ E+ FR+ +G I+ LR LG + +T E+
Sbjct: 331 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG---EKLTDEE 387
Query: 80 AEAMVREGDLDGDGALNETEFCILM 104
+ M+RE D+DGDG +N EF +M
Sbjct: 388 VDEMIREADIDGDGQVNYEEFVQMM 412
Score = 28.5 bits (62), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Query: 35 ESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREGDLDGDGA 94
E ++E F L G IT L + + +G + T+ + + M+ E D DG+G
Sbjct: 273 EEQIAEFKEAFSLFDKDGDGTITTKEL--GTVMRSLGQNP-TEAELQDMINEVDADGNGT 329
Query: 95 LNETEFCILMVR 106
++ EF +M R
Sbjct: 330 IDFPEFLTMMAR 341
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 47.0 bits (110), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 7/87 (8%)
Query: 20 EYEDLLPVMAEKL-DVESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKE 78
++ + L +MA K+ D E + E FR+ +G I+ LR LG + +T E
Sbjct: 64 DFPEFLTMMARKMKDSEEEIRE---AFRVFDKDGNGFISAAELRHVMTNLG---EKLTDE 117
Query: 79 DAEAMVREGDLDGDGALNETEFCILMV 105
+ + M+RE D+DGDG +N EF +M
Sbjct: 118 EVDEMIREADIDGDGQVNYEEFVTMMT 144
Score = 31.2 bits (69), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 42/86 (48%), Gaps = 7/86 (8%)
Query: 38 VSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREGDLDGDGALNE 97
++E F L G IT L + + +G + T+ + + M+ E D DG+G ++
Sbjct: 9 IAEFKEAFSLFDKDGDGTITTKEL--GTVMRSLGQNP-TEAELQDMINEVDADGNGTIDF 65
Query: 98 TEFCILMVRLSPGMMQDAEAWLQKAL 123
EF +M R M+D+E +++A
Sbjct: 66 PEFLTMMAR----KMKDSEEEIREAF 87
>pdb|2KXW|A Chain A, Structure Of The C-Domain Fragment Of Apo Calmodulin Bound
To The Iq Motif Of Nav1.2
Length = 73
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 40/67 (59%), Gaps = 5/67 (7%)
Query: 40 ELCGGFRLLADRD-SGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREGDLDGDGALNET 98
EL F++ DRD +GLI+ LR LG + +T ++ + M+RE D+DGDG +N
Sbjct: 9 ELIEAFKVF-DRDGNGLISAAELRHVMTNLG---EKLTDDEVDEMIREADIDGDGHINYE 64
Query: 99 EFCILMV 105
EF +MV
Sbjct: 65 EFVRMMV 71
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 46.6 bits (109), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 3/86 (3%)
Query: 20 EYEDLLPVMAEKLDVESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKED 79
++ + L +MA K+ +L FR+ +G I+ LR LG + +T E+
Sbjct: 64 DFPEFLNLMARKMKDTDSEEKLKEAFRVFDKDGNGFISAAELRHVMTNLG---EKLTDEE 120
Query: 80 AEAMVREGDLDGDGALNETEFCILMV 105
+ M+RE D+DGDG +N EF +M+
Sbjct: 121 VDEMIREADVDGDGQVNYEEFVQVMM 146
Score = 28.1 bits (61), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Query: 38 VSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREGDLDGDGALNE 97
++E F L G IT L + + +G + T+ + + M+ E D DG+G ++
Sbjct: 9 IAEFKEAFSLFDKDGDGTITTKEL--GTVMRSLGQNP-TEAELQDMINEVDADGNGTIDF 65
Query: 98 TEFCILMVRLSPGMMQDAEAWLQKAL 123
EF LM R D+E L++A
Sbjct: 66 PEFLNLMARKMKDT--DSEEKLKEAF 89
>pdb|2RO9|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 C-Terminal Domain
Length = 69
Score = 46.6 bits (109), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Query: 40 ELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREGDLDGDGALNETE 99
EL FR+ +G I+ LR LG + +T E+ + M+RE D+DGDG +N E
Sbjct: 5 ELKEAFRVFDKDQNGFISAAELRHVMTNLG---EKLTDEEVDEMIREADVDGDGQINYEE 61
Query: 100 FCILMV 105
F +M+
Sbjct: 62 FVKVMM 67
>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean
Calmodulin Isoform 4 Fused With The Calmodulin-Binding
Domain Of Ntmkp1
Length = 92
Score = 45.8 bits (107), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 40 ELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREGDLDGDGALNETE 99
EL F++ +G I+ LR ++ +G + +T E+ E M++E DLDGDG +N E
Sbjct: 10 ELKEAFKVFDKDQNGYISASELRH--VMINLG-EKLTDEEVEQMIKEADLDGDGQVNYEE 66
Query: 100 FCILMV 105
F +M+
Sbjct: 67 FVKMMM 72
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 45.8 bits (107), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 20 EYEDLLPVMAEKLDVESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKED 79
++ + L +MA K+ E+ FR+ +G I+ LR LG + +T E+
Sbjct: 64 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG---EKLTDEE 120
Query: 80 AEAMVREGDLDGDGALNETEFCILMV 105
+ M+RE ++DGDG +N EF +M
Sbjct: 121 VDEMIREANIDGDGQVNYEEFVQMMT 146
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Query: 34 VESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREGDLDGDG 93
E ++E F L G IT L + + +G + T+ + + M+ E D DG+G
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKEL--GTVMRSLGQNP-TEAELQDMINEVDADGNG 61
Query: 94 ALNETEFCILMVR 106
++ EF +M R
Sbjct: 62 TIDFPEFLTMMAR 74
>pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 C-Terminal Domain
Length = 70
Score = 45.8 bits (107), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 40 ELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREGDLDGDGALNETE 99
EL F++ +G I+ LR ++ +G + +T E+ E M++E DLDGDG +N E
Sbjct: 5 ELKEAFKVFDKDQNGYISASELRH--VMINLG-EKLTDEEVEQMIKEADLDGDGQVNYEE 61
Query: 100 FCILMV 105
F +M+
Sbjct: 62 FVKMMM 67
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 47/87 (54%), Gaps = 6/87 (6%)
Query: 20 EYEDLLPVMAEKL-DVESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKE 78
++ + L +MA K+ D +S E+ FR+ +G I+ LR LG + +T E
Sbjct: 60 DFPEFLTMMARKMKDTDS--EEIREAFRVFDKDGNGYISAAELRHVMTNLG---EKLTDE 114
Query: 79 DAEAMVREGDLDGDGALNETEFCILMV 105
+ + M+RE ++DGDG +N EF +M
Sbjct: 115 EVDEMIREANIDGDGQVNYEEFVQMMT 141
Score = 28.1 bits (61), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Query: 38 VSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREGDLDGDGALNE 97
++E F L G IT L + + +G + T+ + + M+ E D DG+G ++
Sbjct: 5 IAEFKEAFSLFDKDGDGTITTKEL--GTVMRSLGQNP-TEAELQDMINEVDADGNGTIDF 61
Query: 98 TEFCILMVR 106
EF +M R
Sbjct: 62 PEFLTMMAR 70
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 3/86 (3%)
Query: 20 EYEDLLPVMAEKLDVESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKED 79
++ + L +MA + E+ FR+ +G I+ LR LG + +T E+
Sbjct: 365 DFPEFLTMMARWMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG---EKLTDEE 421
Query: 80 AEAMVREGDLDGDGALNETEFCILMV 105
+ M+RE D+DGDG +N EF +M
Sbjct: 422 VDEMIREADIDGDGQVNYEEFVQMMT 447
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Query: 34 VESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREGDLDGDG 93
E ++E F L G IT L + + +G + T+ + + M+ E D DG+G
Sbjct: 306 TEEQIAEFKEAFSLFDKDGDGTITTKEL--GTVMRSLGQNP-TEAELQDMINEVDADGNG 362
Query: 94 ALNETEFCILMVR 106
++ EF +M R
Sbjct: 363 TIDFPEFLTMMAR 375
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 47/85 (55%), Gaps = 5/85 (5%)
Query: 21 YEDLLPVMAEKLDVESFVSELCGGFRLLADRD-SGLITPGSLRQNSALLGMGMDGMTKED 79
+ + +MA+++ E+ F++ DRD G I+P LR ++ +G + +T E+
Sbjct: 65 FTEFCGIMAKQMRETDTEEEMREAFKIF-DRDGDGFISPAELR--FVMINLG-EKVTDEE 120
Query: 80 AEAMVREGDLDGDGALNETEFCILM 104
+ M+RE D DGDG +N EF ++
Sbjct: 121 IDEMIREADFDGDGMINYEEFVWMI 145
>pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin And 1mm
Calcium Chloride
pdb|1YRT|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin
Length = 74
Score = 43.9 bits (102), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 40 ELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREGDLDGDGALNETE 99
E+ FR+ +G I+ LR LG + +T E+ + M+RE D+DGDG +N E
Sbjct: 10 EIREAFRVFDKDGNGYISAAELRHVMTNLG---EKLTDEEVDEMIREADIDGDGQVNYEE 66
Query: 100 FCILM 104
F +M
Sbjct: 67 FVQMM 71
>pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin Carboxy-Terminal
Domain
pdb|1CMG|A Chain A, Nmr Solution Structure Of Calcium-Loaded Calmodulin
Carboxy- Terminal Domain
Length = 73
Score = 43.9 bits (102), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 40 ELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREGDLDGDGALNETE 99
E+ FR+ +G I+ LR LG + +T E+ + M+RE D+DGDG +N E
Sbjct: 9 EIREAFRVFDKDGNGYISAAELRHVMTNLG---EKLTDEEVDEMIREADIDGDGQVNYEE 65
Query: 100 FCILM 104
F +M
Sbjct: 66 FVQMM 70
>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal Domain
pdb|1J7P|A Chain A, Solution Structure Of Calcium Calmodulin C-Terminal Domain
pdb|2K3S|B Chain B, Haddock-Derived Structure Of The Ch-Domain Of The
Smoothelin-Like 1 Complexed With The C-Domain Of
Apocalmodulin
pdb|2KUH|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam C-Terminal Domain
pdb|2LLQ|A Chain A, Solution Nmr-Derived Structure Of Calmodulin C-Lobe Bound
With Er Alpha Peptide
Length = 67
Score = 43.9 bits (102), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 40 ELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREGDLDGDGALNETE 99
E+ FR+ +G I+ LR LG + +T E+ + M+RE D+DGDG +N E
Sbjct: 3 EIREAFRVFDKDGNGYISAAELRHVMTNLG---EKLTDEEVDEMIREADIDGDGQVNYEE 59
Query: 100 FCILM 104
F +M
Sbjct: 60 FVQMM 64
>pdb|2A4J|A Chain A, Solution Structure Of The C-Terminal Domain (T94-Y172) Of
The Human Centrin 2 In Complex With A 17 Residues
Peptide (P1-Xpc) From Xeroderma Pigmentosum Group C
Protein
pdb|2K2I|A Chain A, Nmr Solution Structure Of The C-Terminal Domain (T94-Y172)
Of The Human Centrin 2 In Complex With A Repeat Sequence
Of Human Sfi1 (R641-T660)
Length = 79
Score = 43.9 bits (102), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
Query: 40 ELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREGDLDGDGALNETE 99
E+ F+L D ++G I+ +L++ + LG + +T E+ + M+ E D DGDG ++E E
Sbjct: 12 EILKAFKLFDDDETGKISFKNLKRVAKELG---ENLTDEELQEMIDEADRDGDGEVSEQE 68
Query: 100 FCILMVRLS 108
F +M + S
Sbjct: 69 FLRIMKKTS 77
>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp
Length = 69
Score = 43.9 bits (102), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 40 ELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREGDLDGDGALNETE 99
E+ FR+ +G I+ LR LG + +T E+ + M+RE D+DGDG +N E
Sbjct: 6 EIREAFRVFDKDGNGYISAAELRHVMTNLG---EKLTDEEVDEMIREADIDGDGQVNYEE 62
Query: 100 FCILM 104
F +M
Sbjct: 63 FVQMM 67
>pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From Calmodulin
To 1.7 A Resolution
pdb|2LQP|A Chain A, Nmr Solution Structure Of The Ca2+-Calmodulin C-Terminal
Domain In A Complex With A Peptide (Nscate) From The
L-Type Voltage-Gated Calcium Channel Alpha1c Subunit
Length = 71
Score = 43.9 bits (102), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 40 ELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREGDLDGDGALNETE 99
E+ FR+ +G I+ LR LG + +T E+ + M+RE D+DGDG +N E
Sbjct: 7 EIREAFRVFDKDGNGYISAAELRHVMTNLG---EKLTDEEVDEMIREADIDGDGQVNYEE 63
Query: 100 FCILM 104
F +M
Sbjct: 64 FVQMM 68
>pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With Pyrophosphate
Length = 67
Score = 43.5 bits (101), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 40 ELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREGDLDGDGALNETE 99
E+ FR+ +G I+ LR LG + +T E+ + M+RE D+DGDG +N E
Sbjct: 6 EIREAFRVFDKDGNGYISAAELRHVMTNLG---EKLTDEEVDEMIREADIDGDGQVNYEE 62
Query: 100 FCILM 104
F +M
Sbjct: 63 FVQMM 67
>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant)
Length = 449
Score = 43.5 bits (101), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 3/86 (3%)
Query: 20 EYEDLLPVMAEKLDVESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKED 79
++ L +MA K+ E+ FR+ +G I+ LR LG + +T E+
Sbjct: 365 DFPQFLTMMARKMKDTDSEEEIREAFRVFGKDGNGYISAAQLRHVMTNLG---EKLTDEE 421
Query: 80 AEAMVREGDLDGDGALNETEFCILMV 105
+ M+RE +DGDG +N +F +M
Sbjct: 422 VDEMIREAGIDGDGQVNYEQFVQMMT 447
>pdb|1OQP|A Chain A, Structure Of The Ca2+C-Terminal Domain Of Caltractin In
Complex With The Cdc31p-Binding Domain From Kar1p
Length = 77
Score = 42.7 bits (99), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
Query: 40 ELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREGDLDGDGALNETE 99
E+ FRL D +SG IT LR+ + LG + +T+E+ + M+ E D + D ++E E
Sbjct: 10 EILKAFRLFDDDNSGTITIKDLRRVAKELG---ENLTEEELQEMIAEADRNDDNEIDEDE 66
Query: 100 FCILMVRLS 108
F +M + S
Sbjct: 67 FIRIMKKTS 75
>pdb|2KZ2|A Chain A, Calmodulin, C-Terminal Domain, F92e Mutant
Length = 94
Score = 42.7 bits (99), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 5/66 (7%)
Query: 40 ELCGGFRLLADRD-SGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREGDLDGDGALNET 98
E+ FR+ D+D +G I+ LR LG + +T E+ + M+RE D+DGDG +N
Sbjct: 30 EIREAFRV-EDKDGNGYISAAELRHVMTNLG---EKLTDEEVDEMIREADIDGDGQVNYE 85
Query: 99 EFCILM 104
EF +M
Sbjct: 86 EFVQMM 91
>pdb|2GGM|A Chain A, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
pdb|2GGM|B Chain B, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
Length = 172
Score = 42.4 bits (98), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 21 YEDLLPVMAEKLDVESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDA 80
+ D L V +K + E+ F+L D ++G I+ +L++ + LG + +T E+
Sbjct: 86 FGDFLTVXTQKXSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELG---ENLTDEEL 142
Query: 81 EAMVREGDLDGDGALNETEFCILMVRLS 108
+ + E D DGDG ++E EF + + S
Sbjct: 143 QEXIDEADRDGDGEVSEQEFLRIXKKTS 170
>pdb|2RRT|A Chain A, Solution Structure Of Magnesium-Bound Form Of Calmodulin
C-Domain E104dE140D MUTANT
Length = 72
Score = 42.0 bits (97), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 40 ELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREGDLDGDGALNETE 99
E+ FR+ +G I+ LR LG + +T E+ + M+RE D+DGDG +N +
Sbjct: 8 EIREAFRVFDKDGNGYISAADLRHVMTNLG---EKLTDEEVDEMIREADIDGDGQVNYED 64
Query: 100 FCILM 104
F +M
Sbjct: 65 FVQMM 69
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 43/86 (50%), Gaps = 3/86 (3%)
Query: 20 EYEDLLPVMAEKLDVESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKED 79
++ + L +MA K+ E+ FR+ +G ++ LR LG + ++ E+
Sbjct: 64 DFPEFLGMMARKMKDTDNEEEIREAFRVFDKDGNGFVSAAELRHVMTRLG---EKLSDEE 120
Query: 80 AEAMVREGDLDGDGALNETEFCILMV 105
+ M+R D DGDG +N EF ++V
Sbjct: 121 VDEMIRAADTDGDGQVNYEEFVRVLV 146
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 39.7 bits (91), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Query: 40 ELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREGDLDGDGALNETE 99
E+ FR+ +G I+ LR LG + +T E+ + +RE D+DGDG +N E
Sbjct: 85 EIREAFRVFDKDGNGYISAAELRHVXTNLG---EKLTDEEVDQXIREADIDGDGQVNYEE 141
Query: 100 FC 101
F
Sbjct: 142 FV 143
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 39.3 bits (90), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Query: 40 ELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREGDLDGDGALNETE 99
E+ FR+ +G I+ LR LG + +T E+ + +RE D+DGDG +N E
Sbjct: 84 EIREAFRVFDKDGNGYISAAELRHVXTNLG---EKLTDEEVDEXIREADIDGDGQVNYEE 140
Query: 100 FC 101
F
Sbjct: 141 FV 142
>pdb|2BL0|B Chain B, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 145
Score = 38.9 bits (89), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Query: 40 ELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREGDLDGDGALNETE 99
E+ FR L +G I LRQ LL +G D +T + E +++E + GDGA+N
Sbjct: 77 EMLDAFRALDKEGNGTIQEAELRQ--LLLNLG-DALTSSEVEELMKEVSVSGDGAINYES 133
Query: 100 FCILMVRLSP 109
F ++V P
Sbjct: 134 FVDMLVTGYP 143
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 40 ELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREGDLDGDGALNETE 99
E+ FR+ +G I+ LR LG + +T E+ + +RE D+DGDG +N E
Sbjct: 84 EIREAFRVFDKDGNGYISAAELRHVXTNLG---EKLTDEEVDEXIREADIDGDGQVNYEE 140
Query: 100 F 100
F
Sbjct: 141 F 141
>pdb|3TZ1|A Chain A, Crystal Structure Of The Ca2+-saturated C-terminal Domain
Of Akazara Scallop Troponin C In Complex With A Troponin
I Fragment
Length = 74
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 40 ELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREGDLDGDGALNETE 99
EL FR+L G+I LR LG D +T+++ E M+ E D DG G ++ E
Sbjct: 8 ELKEAFRVLDKEKKGVIKVDVLRWILKSLG---DELTEDEIENMIAETDTDGSGTVDYEE 64
Query: 100 F-CILM 104
F C++M
Sbjct: 65 FKCLMM 70
>pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 46/92 (50%), Gaps = 8/92 (8%)
Query: 20 EYEDLLPVMAEKLDVESF----VSELCGGFRLLADRDSGLITPGSLRQN-SALLGMGMDG 74
+++D + +M KL E+ V EL FR G I+ LR+ ALLG
Sbjct: 65 DFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRALLG---HQ 121
Query: 75 MTKEDAEAMVREGDLDGDGALNETEFCILMVR 106
+ D E ++R+ DL+GDG ++ EF +M R
Sbjct: 122 VGHRDIEEIIRDVDLNGDGRVDFEEFVRMMSR 153
>pdb|2B1U|A Chain A, Solution Structure Of Calmodulin-Like Skin Protein C
Terminal Domain
Length = 71
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 38 VSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREGDLDGDGALNE 97
+ +L FR G IT LR+ A+ G+G + +E+ +AM+RE D+D DG +N
Sbjct: 5 LEDLQVAFRAFDQDGDGHITVDELRR--AMAGLGQ-PLPQEELDAMIREADVDQDGRVNY 61
Query: 98 TEFCILMVR 106
EF ++ +
Sbjct: 62 EEFARMLAQ 70
>pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 34.7 bits (78), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 8/92 (8%)
Query: 20 EYEDLLPVMAEKLDVESF----VSELCGGFRLLADRDSGLITPGSLRQN-SALLGMGMDG 74
+++D + +M KL E+ V EL FR G I+ LR+ LLG
Sbjct: 65 DFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLG---HQ 121
Query: 75 MTKEDAEAMVREGDLDGDGALNETEFCILMVR 106
+ D E ++R+ DL+GDG ++ EF +M R
Sbjct: 122 VGHRDIEEIIRDVDLNGDGRVDFEEFVRMMSR 153
>pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc
pdb|2LAP|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain With Rdc
Length = 167
Score = 34.7 bits (78), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 8/92 (8%)
Query: 20 EYEDLLPVMAEKLDVESF----VSELCGGFRLLADRDSGLITPGSLRQN-SALLGMGMDG 74
+++D + +M KL E+ V EL FR G I+ LR+ LLG
Sbjct: 79 DFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLG---HQ 135
Query: 75 MTKEDAEAMVREGDLDGDGALNETEFCILMVR 106
+ D E ++R+ DL+GDG ++ EF +M R
Sbjct: 136 VGHRDIEEIIRDVDLNGDGRVDFEEFVRMMSR 167
>pdb|1SMG|A Chain A, Calcium-Bound E41a Mutant Of The N-Domain Of Chicken
Troponin C, Nmr, 40 Structures
Length = 90
Score = 34.3 bits (77), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Query: 35 ESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREGDLDGDGA 94
E ++E F + G I+ +L +LG TKE+ +A++ E D DG G
Sbjct: 16 EEMIAEFKAAFDMFDADGGGDISTKALGTVMRMLGQNP---TKEELDAIIEEVDEDGSGT 72
Query: 95 LNETEFCILMVR 106
++ EF ++MVR
Sbjct: 73 IDFEEFLVMMVR 84
>pdb|1AVS|A Chain A, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1AVS|B Chain B, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1BLQ|A Chain A, Structure And Interaction Site Of The Regulatory Domain Of
Troponin-C When Complexed With The 96-148 Region Of
Troponin-I, Nmr, 29 Structures
pdb|1SKT|A Chain A, Solution Structure Of Apo N-Domain Of Troponin C, Nmr, 40
Structures
pdb|1TNP|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1TNQ|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1ZAC|A Chain A, N-Domain Of Troponin C From Chicken Skeletal Muscle, Nmr,
Minimized Average Structure
Length = 90
Score = 33.9 bits (76), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 35 ESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREGDLDGDGA 94
E ++E F + G I+ L +LG TKE+ +A++ E D DG G
Sbjct: 16 EEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNP---TKEELDAIIEEVDEDGSGT 72
Query: 95 LNETEFCILMVR 106
++ EF ++MVR
Sbjct: 73 IDFEEFLVMMVR 84
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 33.1 bits (74), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 35 ESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREGDLDGDGA 94
E ++E F + G I+ L +LG TKE+ +A++ E D DG G
Sbjct: 16 EEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNP---TKEELDAIIEEVDEDGSGT 72
Query: 95 LNETEFCILMVR 106
++ EF ++MVR
Sbjct: 73 IDFEEFLVMMVR 84
Score = 26.2 bits (56), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Query: 40 ELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREGDLDGDGALNETE 99
EL FR+ G I L + +L + +T+ED E ++++ D + DG ++ E
Sbjct: 97 ELANCFRIFDKNADGFIDIEELGE---ILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDE 153
Query: 100 FCILM 104
F +M
Sbjct: 154 FLKMM 158
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 33.1 bits (74), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 35 ESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREGDLDGDGA 94
E ++E F + G I+ L +LG TKE+ +A++ E D DG G
Sbjct: 13 EEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNP---TKEELDAIIEEVDEDGSGT 69
Query: 95 LNETEFCILMVR 106
++ EF ++MVR
Sbjct: 70 IDFEEFLVMMVR 81
Score = 26.2 bits (56), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Query: 40 ELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREGDLDGDGALNETE 99
EL FR+ G I L + +L + +T+ED E ++++ D + DG ++ E
Sbjct: 94 ELANCFRIFDKNADGFIDIEELGE---ILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDE 150
Query: 100 FCILM 104
F +M
Sbjct: 151 FLKMM 155
>pdb|1TRF|A Chain A, Solution Structure Of The Tr1c Fragment Of Skeletal Muscle
Troponin-C
Length = 76
Score = 33.1 bits (74), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 35 ESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREGDLDGDGA 94
E ++E F + G I+ L +LG TKE+ +A++ E D DG G
Sbjct: 5 EEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLG---QNPTKEELDAIIEEVDEDGSGT 61
Query: 95 LNETEFCILMVR 106
++ EF ++MVR
Sbjct: 62 IDFEEFLVMMVR 73
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In
The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 33.1 bits (74), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 35 ESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREGDLDGDGA 94
E ++E F + G I+ L +LG TKE+ +A++ E D DG G
Sbjct: 16 EEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNP---TKEELDAIIEEVDEDGSGT 72
Query: 95 LNETEFCILMVR 106
++ EF ++MVR
Sbjct: 73 IDFEEFLVMMVR 84
Score = 25.4 bits (54), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Query: 40 ELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREGDLDGDGALNETE 99
EL FR+ G I L + +L + +T+ED E ++++ D + DG ++ E
Sbjct: 97 ELADCFRIFDKNADGFIDIEELGE---ILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDE 153
Query: 100 FCILM 104
F +M
Sbjct: 154 FLKMM 158
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 33.1 bits (74), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 35 ESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREGDLDGDGA 94
E ++E F + G I+ L +LG TKE+ +A++ E D DG G
Sbjct: 16 EEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNP---TKEELDAIIEEVDEDGSGT 72
Query: 95 LNETEFCILMVR 106
++ EF ++MVR
Sbjct: 73 IDFEEFLVMMVR 84
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 33.1 bits (74), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 35 ESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREGDLDGDGA 94
E ++E F + G I+ L +LG TKE+ +A++ E D DG G
Sbjct: 16 EEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNP---TKEELDAIIEEVDEDGSGT 72
Query: 95 LNETEFCILMVR 106
++ EF ++MVR
Sbjct: 73 IDFEEFLVMMVR 84
>pdb|2JNF|A Chain A, Solution Structure Of Fly Troponin C, Isoform F1
Length = 158
Score = 33.1 bits (74), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 28 MAEKLDVESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREG 87
+ E+++ E EL FRL +G I+ +R+ A L + ++ ED +AM+ E
Sbjct: 80 LGEEVNPEQMQQELREAFRLYDKEGNGYISTDVMREILAELD---ETLSSEDLDAMIDEI 136
Query: 88 DLDGDGALNETEFCILM 104
D DG G ++ EF +M
Sbjct: 137 DADGSGTVDFEEFMGVM 153
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 32.7 bits (73), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 35 ESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREGDLDGDGA 94
E ++E F + G I+ L +LG TKE+ +A++ E D DG G
Sbjct: 13 EEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTP---TKEELDAIIEEVDEDGSGT 69
Query: 95 LNETEFCILMVR 106
++ EF ++MVR
Sbjct: 70 IDFEEFLVMMVR 81
Score = 25.8 bits (55), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Query: 40 ELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREGDLDGDGALNETE 99
EL FR+ G I L + + + +T E+ E+++++GD + DG ++ E
Sbjct: 94 ELAELFRIFDRNADGYIDAEEL---AEIFRASGEHVTDEEIESLMKDGDKNNDGRIDFDE 150
Query: 100 FCILM 104
F +M
Sbjct: 151 FLKMM 155
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of
Troponin I
Length = 159
Score = 32.3 bits (72), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 35 ESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREGDLDGDGA 94
E ++E F + G I+ L +LG TKE+ +A++ E D DG G
Sbjct: 13 EEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTP---TKEELDAIIEEVDEDGSGT 69
Query: 95 LNETEFCILMVR 106
++ EF ++MVR
Sbjct: 70 IDFEEFLVMMVR 81
Score = 26.2 bits (56), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Query: 40 ELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREGDLDGDGALNETE 99
EL FR+ G I L + + + +T E+ E+++++GD + DG ++ E
Sbjct: 94 ELAECFRIFDRNADGYIDAEEL---AEIFRASGEHVTDEEIESLMKDGDKNNDGRIDFDE 150
Query: 100 FCILM 104
F +M
Sbjct: 151 FLKMM 155
>pdb|2K7C|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 C-Domain
pdb|2K7D|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain
Length = 72
Score = 32.0 bits (71), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Query: 38 VSELCGGFRLLADRDSGLITPGSLRQN-SALLGMGMDGMTKEDAEAMVREGDLDGDGALN 96
V EL FR G I+ LR+ LLG + D E ++R+ DL+GDG ++
Sbjct: 6 VKELRDAFREFDTNGDGEISTSELREAMRKLLGHQV---GHRDIEEIIRDVDLNGDGRVD 62
Query: 97 ETEFCILMVR 106
EF +M R
Sbjct: 63 FEEFVRMMSR 72
>pdb|1BU3|A Chain A, Refined Crystal Structure Of Calcium-Bound Silver Hake (Pi
4.2) Parvalbumin At 1.65 A
Length = 109
Score = 31.2 bits (69), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 47 LLADRD-SGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREGDLDGDGALNETEFCILM 104
+ D+D SG I L+ + G +T + +A ++ GD DGDGA+ E+ L+
Sbjct: 49 FVIDQDKSGFIEEDELKLFLQVFSAGARALTDAETKAFLKAGDSDGDGAIGVDEWAALV 107
>pdb|4GJG|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant D2n/v28i/l29q/g30d (niqd) In
Complex With Cadmium
Length = 89
Score = 31.2 bits (69), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 47 LLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREGDLDGDGALNETEFCILMVR 106
+ D + G I+ L + +LG T E+ + M+ E D DG G ++ EF ++MVR
Sbjct: 27 FIQDAEDGCISTKELGKVMRMLGQNP---TPEELQEMIDEVDEDGSGTVDFDEFLVMMVR 83
>pdb|1R2U|A Chain A, Nmr Structure Of The N Domain Of Trout Cardiac Troponin C
At 30 C
pdb|1R6P|A Chain A, Nmr Structure Of The N-Terminal Domain Of Trout Cardiac
Troponin C At 7 C
Length = 89
Score = 31.2 bits (69), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 47 LLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREGDLDGDGALNETEFCILMVR 106
+ D + G I+ L + +LG T E+ + M+ E D DG G ++ EF ++MVR
Sbjct: 27 FIQDAEDGCISTKELGKVMRMLGQNP---TPEELQEMIDEVDEDGSGTVDFDEFLVMMVR 83
>pdb|3QGA|C Chain C, 3.0 A Model Of Iron Containing Urease Urea2b2 From
Helicobacter Mustelae
pdb|3QGA|F Chain F, 3.0 A Model Of Iron Containing Urease Urea2b2 From
Helicobacter Mustelae
pdb|3QGA|I Chain I, 3.0 A Model Of Iron Containing Urease Urea2b2 From
Helicobacter Mustelae
pdb|3QGA|L Chain L, 3.0 A Model Of Iron Containing Urease Urea2b2 From
Helicobacter Mustelae
pdb|3QGA|O Chain O, 3.0 A Model Of Iron Containing Urease Urea2b2 From
Helicobacter Mustelae
pdb|3QGA|R Chain R, 3.0 A Model Of Iron Containing Urease Urea2b2 From
Helicobacter Mustelae
pdb|3QGK|C Chain C, 3.0 A Model Of Iron Containing Urease Urea2b2 From
Helicobacter Mustelae (Refined W NO ORDERED SOLVENT)
pdb|3QGK|F Chain F, 3.0 A Model Of Iron Containing Urease Urea2b2 From
Helicobacter Mustelae (Refined W NO ORDERED SOLVENT)
pdb|3QGK|I Chain I, 3.0 A Model Of Iron Containing Urease Urea2b2 From
Helicobacter Mustelae (Refined W NO ORDERED SOLVENT)
pdb|3QGK|L Chain L, 3.0 A Model Of Iron Containing Urease Urea2b2 From
Helicobacter Mustelae (Refined W NO ORDERED SOLVENT)
pdb|3QGK|O Chain O, 3.0 A Model Of Iron Containing Urease Urea2b2 From
Helicobacter Mustelae (Refined W NO ORDERED SOLVENT)
pdb|3QGK|R Chain R, 3.0 A Model Of Iron Containing Urease Urea2b2 From
Helicobacter Mustelae (Refined W NO ORDERED SOLVENT)
Length = 568
Score = 30.8 bits (68), Expect = 0.22, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 20/34 (58%)
Query: 56 ITPGSLRQNSALLGMGMDGMTKEDAEAMVREGDL 89
I PGS+ L MG+ MT D++AM R G++
Sbjct: 338 IRPGSIAAEDTLHDMGVIAMTSSDSQAMGRAGEV 371
>pdb|1A75|B Chain B, Whiting Parvalbumin
Length = 109
Score = 30.4 bits (67), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 47 LLADRD-SGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREGDLDGDGALNETEFCILM 104
+ D+D SG I L+ + G +T + +A ++ GD DGDGA+ E+ L+
Sbjct: 49 VFIDQDKSGFIEEDELKLFLQVFKAGARALTDAETKAFLKAGDSDGDGAIGVEEWVALV 107
>pdb|1A75|A Chain A, Whiting Parvalbumin
Length = 108
Score = 30.4 bits (67), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 47 LLADRD-SGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREGDLDGDGALNETEFCILM 104
+ D+D SG I L+ + G +T + +A ++ GD DGDGA+ E+ L+
Sbjct: 48 VFIDQDKSGFIEEDELKLFLQVFKAGARALTDAETKAFLKAGDSDGDGAIGVEEWVALV 106
>pdb|2K2A|A Chain A, Solution Structure Of The Apo C Terminal Domain Of
Lethoceru C Isoform F1
Length = 70
Score = 30.4 bits (67), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 40 ELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREGDLDGDGALNETE 99
EL FRL +G I+ +R+ A L + ++ ED +AM+ E D DG G ++ E
Sbjct: 4 ELREAFRLYDKEGNGYISTDVMREILAELD---ETLSSEDLDAMIDEIDADGSGTVDFEE 60
Query: 100 FCILM 104
F +M
Sbjct: 61 FMGVM 65
>pdb|1SW8|A Chain A, Solution Structure Of The N-Terminal Domain Of Human N60d
Calmodulin Refined With Paramagnetism Based Strategy
Length = 79
Score = 30.0 bits (66), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Query: 34 VESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREGDLDGDG 93
E ++E F L G IT L + + +G + T+ + + M+ E D DGDG
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKEL--GTVMRSLGQNP-TEAELQDMINEVDADGDG 61
Query: 94 ALNETEFCILMVR 106
++ EF +M R
Sbjct: 62 TIDFPEFLTMMAR 74
>pdb|3E3R|A Chain A, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
pdb|3E3R|B Chain B, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
Length = 204
Score = 30.0 bits (66), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 8/80 (10%)
Query: 45 FRLLADRD-SGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREGDLDGDGALNETEFCIL 103
FR L DRD S + RQ A LG+ +D + +AE + R+ D +G G L+ EF
Sbjct: 43 FRQL-DRDGSRSLDADEFRQGLAKLGLVLD---QAEAEGVCRKWDRNGSGTLDLEEF--- 95
Query: 104 MVRLSPGMMQDAEAWLQKAL 123
+ L P M Q EA + A
Sbjct: 96 LRALRPPMSQAREAVIAAAF 115
>pdb|2I08|A Chain A, Solvation Effect In Conformational Changes Of Ef-Hand
Proteins: X-Ray Structure Of Ca2+-Saturated Double
Mutant Q41l-K75i Of N-Domain Of Calmodulin
Length = 78
Score = 29.6 bits (65), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Query: 38 VSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREGDLDGDGALNE 97
++E F L G IT L + + +G++ T+ + + M+ E D DG+G ++
Sbjct: 9 IAEFKEAFSLYDKDGDGTITTKEL--GTVMRSLGLNP-TEAELQDMINEVDADGNGTIDF 65
Query: 98 TEFCILMVRL 107
EF +M R+
Sbjct: 66 PEFLTMMARI 75
>pdb|3C1D|A Chain A, X-Ray Crystal Structure Of Recx
pdb|3C1D|B Chain B, X-Ray Crystal Structure Of Recx
Length = 159
Score = 29.3 bits (64), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 13/77 (16%)
Query: 16 STGSEYEDLLPVMAEK--LDVESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMD 73
+T +YE ++ E LD FV+ R +A R P +RQ +
Sbjct: 44 ATAEDYERVIAWCHEHGYLDDSRFVA------RFIASRSRKGYGPARIRQE-----LNQK 92
Query: 74 GMTKEDAEAMVREGDLD 90
G+++E E +RE D+D
Sbjct: 93 GISREATEKAMREADID 109
>pdb|2KFX|T Chain T, Structure Of The N-Terminal Domain Of Human Cardiac
Troponin C Bound To Calcium Ion And To The Inhibitor W7
Length = 89
Score = 29.3 bits (64), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%)
Query: 76 TKEDAEAMVREGDLDGDGALNETEFCILMVR 106
T E+ + M+ E D DG G ++ EF ++MVR
Sbjct: 53 TPEELQEMIDEVDEDGSGTVDFDEFLVMMVR 83
>pdb|2CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 30
Structures
Length = 89
Score = 29.3 bits (64), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%)
Query: 76 TKEDAEAMVREGDLDGDGALNETEFCILMVR 106
T E+ + M+ E D DG G ++ EF ++MVR
Sbjct: 53 TPEELQEMIDEVDEDGSGTVDFDEFLVMMVR 83
>pdb|1WRK|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRK|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRL|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|C Chain C, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|D Chain D, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|E Chain E, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|F Chain F, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
Length = 88
Score = 28.9 bits (63), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%)
Query: 76 TKEDAEAMVREGDLDGDGALNETEFCILMVR 106
T E+ + M+ E D DG G ++ EF ++MVR
Sbjct: 53 TPEELQEMIDEVDEDGSGTVDFDEFLVMMVR 83
>pdb|2RO8|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 N-Terminal Domain
Length = 79
Score = 28.9 bits (63), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Query: 38 VSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREGDLDGDGALNE 97
+SE F L G IT L + + +G + T+ + + M+ E D DG+G ++
Sbjct: 9 ISEFKEAFSLFDKDGDGCITTKEL--GTVMRSLGQNP-TEAELQDMINEVDADGNGTIDF 65
Query: 98 TEFCILMVR 106
EF LM R
Sbjct: 66 PEFLNLMAR 74
>pdb|3B2N|A Chain A, Crystal Structure Of Dna-binding Response Regulator, Luxr
Family, From Staphylococcus Aureus
Length = 133
Score = 28.9 bits (63), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 15/90 (16%)
Query: 40 ELCGGFRLLADRDSGLITPGSLRQ---NSALLGMGMDGMTKEDAEAMVREGDLDGDGALN 96
+L G F +LAD D+GL + + N +L + M GMT + A +R+ L+
Sbjct: 24 KLHGDFEILADTDNGLDAMKLIEEYNPNVVILDIEMPGMTGLEVLAEIRKKHLN------ 77
Query: 97 ETEFCILMVRLSPG-----MMQDAEAWLQK 121
+ I+ PG ++ D +A++ K
Sbjct: 78 -IKVIIVTTFKRPGYFEKAVVNDVDAYVLK 106
>pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C
Length = 161
Score = 28.5 bits (62), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%)
Query: 76 TKEDAEAMVREGDLDGDGALNETEFCILMVR 106
T E+ + M+ E D DG G ++ EF ++MVR
Sbjct: 53 TPEELQEMIDEVDEDGSGTVDFDEFLVMMVR 83
Score = 26.9 bits (58), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Query: 40 ELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREGDLDGDGALNETE 99
EL FR+ G I L+ +L + +T++D E ++++GD + DG ++ E
Sbjct: 96 ELSDLFRMWDKNADGYIDLDELK---IMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 152
Query: 100 FCILM 104
F M
Sbjct: 153 FLEFM 157
>pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C
Length = 161
Score = 28.5 bits (62), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%)
Query: 76 TKEDAEAMVREGDLDGDGALNETEFCILMVR 106
T E+ + M+ E D DG G ++ EF ++MVR
Sbjct: 53 TPEELQEMIDEVDEDGSGTVDFDEFLVMMVR 83
Score = 25.4 bits (54), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Query: 40 ELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREGDLDGDGALNETE 99
EL FR+ G I L+ +L + +T++D E ++++GD + DG ++ E
Sbjct: 96 ELSDLFRMFDKNADGYIDLDELK---IMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 152
Query: 100 FCILM 104
+ M
Sbjct: 153 WLEFM 157
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 28.5 bits (62), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%)
Query: 76 TKEDAEAMVREGDLDGDGALNETEFCILMVR 106
T E+ + M+ E D DG G ++ EF ++MVR
Sbjct: 53 TPEELQEMIDEVDEDGSGTVDFDEFLVMMVR 83
Score = 27.3 bits (59), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Query: 40 ELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREGDLDGDGALNETE 99
EL FR+ G I L + +L + +T++D E ++++GD + DG ++ E
Sbjct: 96 ELSDLFRMFDKNADGYI---DLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 152
Query: 100 FCILM 104
F M
Sbjct: 153 FLEFM 157
>pdb|3IFK|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
pdb|3IFK|B Chain B, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
Length = 90
Score = 28.5 bits (62), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Query: 34 VESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREGDLDGDG 93
E ++E F L G IT L + + +G + T+ + + M+ E D DG+G
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKEL--GTVMRSLGQNP-TEAELQDMINEVDADGNG 61
Query: 94 ALNETEFCILMVR 106
++ EF +M R
Sbjct: 62 TIDFPEFLTMMAR 74
>pdb|4GJF|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant L29q In Complex With Cadmium
Length = 89
Score = 28.5 bits (62), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Query: 52 DSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREGDLDGDGALNETEFCILMVR 106
+ G I+ L + +LG T E+ + M+ E D DG G ++ EF ++MVR
Sbjct: 32 EDGCISTKELGKVMRMLGQNP---TPEELQEMIDEVDEDGSGTVDFDEFLVMMVR 83
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1
Structure
Length = 161
Score = 28.5 bits (62), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%)
Query: 76 TKEDAEAMVREGDLDGDGALNETEFCILMVR 106
T E+ + M+ E D DG G ++ EF ++MVR
Sbjct: 53 TPEELQEMIDEVDEDGSGTVDFDEFLVMMVR 83
Score = 27.7 bits (60), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Query: 40 ELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREGDLDGDGALNETE 99
EL FR+ G I L + +L + +T++D E ++++GD + DG ++ E
Sbjct: 96 ELSDLFRMFDKNADGYI---DLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 152
Query: 100 FCILM 104
F M
Sbjct: 153 FLEFM 157
>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The
F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C
Length = 161
Score = 28.5 bits (62), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%)
Query: 76 TKEDAEAMVREGDLDGDGALNETEFCILMVR 106
T E+ + M+ E D DG G ++ EF ++MVR
Sbjct: 53 TPEELQEMIDEVDEDGSGTVDFDEFLVMMVR 83
Score = 26.6 bits (57), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Query: 40 ELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREGDLDGDGALNETE 99
EL FR+ G I L+ +L + +T++D E ++++GD + DG ++ E
Sbjct: 96 ELSDLFRMXDKNADGYIDLDELK---IMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 152
Query: 100 FCILM 104
F M
Sbjct: 153 FLEFM 157
>pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan Mutant
Of Human Cardiac Troponin C
Length = 161
Score = 28.5 bits (62), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%)
Query: 76 TKEDAEAMVREGDLDGDGALNETEFCILMVR 106
T E+ + M+ E D DG G ++ EF ++MVR
Sbjct: 53 TPEELQEMIDEVDEDGSGTVDFDEFLVMMVR 83
>pdb|1NPQ|A Chain A, Structure Of A Rhodamine-Labeled N-Domain Troponin C
Mutant (Ca2+ Saturated) In Complex With Skeletal
Troponin I 115- 131
Length = 90
Score = 28.5 bits (62), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Query: 35 ESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREGDLDGDGA 94
E ++E F + G I+ L +LG TK + +A++ E D DG G
Sbjct: 16 EEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNP---TKCELDAIICEVDEDGSGT 72
Query: 95 LNETEFCILMVR 106
++ EF ++MVR
Sbjct: 73 IDFEEFLVMMVR 84
>pdb|3UCT|A Chain A, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCT|B Chain B, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCW|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|B Chain B, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|C Chain C, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|D Chain D, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCY|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
Length = 79
Score = 28.5 bits (62), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Query: 34 VESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREGDLDGDG 93
E ++E F L G IT L + + +G + T+ + + M+ E D DG+G
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKEL--GTVMRSLGQNP-TEAELQDMINEVDADGNG 61
Query: 94 ALNETEFCILMVR 106
++ EF +M R
Sbjct: 62 TIDFPEFLTMMAR 74
>pdb|1MXL|C Chain C, Structure Of Cardiac Troponin C-troponin I Complex
pdb|1LXF|C Chain C, Structure Of The Regulatory N-Domain Of Human Cardiac
Troponin C In Complex With Human Cardiac Troponin-I(147-
163) And Bepridil
pdb|1AP4|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Saturated State, Nmr, 40 Structures
pdb|1SPY|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Free State, Nmr, 40 Structures
pdb|2KRD|C Chain C, Solution Structure Of The Regulatory Domain Of Human
Cardiac C In Complex With The Switch Region Of Cardiac
Troponin I A
pdb|2L1R|A Chain A, The Structure Of The Calcium-Sensitizer, Dfbp-O, In
Complex With The N-Domain Of Troponin C And The Switch
Region Of Troponin I
pdb|3SD6|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.4
Resolution.
pdb|3SWB|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.7 A
Resolution
pdb|4GJE|A Chain A, Crystal Structure Of The Refolded Amino-terminal Domain Of
Human Cardiac Troponin C In Complex With Cadmium
Length = 89
Score = 28.5 bits (62), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Query: 52 DSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREGDLDGDGALNETEFCILMVR 106
+ G I+ L + +LG T E+ + M+ E D DG G ++ EF ++MVR
Sbjct: 32 EDGCISTKELGKVMRMLGQNP---TPEELQEMIDEVDEDGSGTVDFDEFLVMMVR 83
>pdb|2LLO|A Chain A, Solution Nmr-Derived Structure Of Calmodulin N-Lobe Bound
With Er Alpha Peptide
Length = 80
Score = 28.5 bits (62), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Query: 34 VESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREGDLDGDG 93
E ++E F L G IT L + + +G + T+ + + M+ E D DG+G
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKEL--GTVMRSLGQNP-TEAELQDMINEVDADGNG 61
Query: 94 ALNETEFCILMVR 106
++ EF +M R
Sbjct: 62 TIDFPEFLTMMAR 74
>pdb|2LQC|A Chain A, Nmr Solution Structure Of A Ca2+-Calmodulin With A Binding
Motif (Nscate) Peptide From The N-Terminal Cytoplasmic
Domain Of The L-Type Voltage-Cated Calcium Channel
Alpha1c Subunit
Length = 77
Score = 28.5 bits (62), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Query: 34 VESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREGDLDGDG 93
E ++E F L G IT L + + +G + T+ + + M+ E D DG+G
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKEL--GTVMRSLGQNP-TEAELQDMINEVDADGNG 61
Query: 94 ALNETEFCILMVR 106
++ EF +M R
Sbjct: 62 TIDFPEFLTMMAR 74
>pdb|1J7O|A Chain A, Solution Structure Of Calcium-calmodulin N-terminal Domain
Length = 76
Score = 28.5 bits (62), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Query: 34 VESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREGDLDGDG 93
E ++E F L G IT L + + +G + T+ + + M+ E D DG+G
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKEL--GTVMRSLGQNP-TEAELQDMINEVDADGNG 61
Query: 94 ALNETEFCILMVR 106
++ EF +M R
Sbjct: 62 TIDFPEFLTMMAR 74
>pdb|1F70|A Chain A, Refined Solution Structure Of Calmodulin N-Terminal Domain
pdb|2PQ3|A Chain A, N-Terminal Calmodulin Zn-Trapped Intermediate
pdb|2KUG|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam N-Terminal Domain
Length = 76
Score = 28.5 bits (62), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Query: 34 VESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREGDLDGDG 93
E ++E F L G IT L + + +G + T+ + + M+ E D DG+G
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKEL--GTVMRSLGQNP-TEAELQDMINEVDADGNG 61
Query: 94 ALNETEFCILMVR 106
++ EF +M R
Sbjct: 62 TIDFPEFLTMMAR 74
>pdb|3B32|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-75
Length = 75
Score = 28.1 bits (61), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Query: 34 VESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREGDLDGDG 93
E ++E F L G IT L + + +G + T+ + + M+ E D DG+G
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKEL--GTVMRSLGQNP-TEAELQDMINEVDADGNG 61
Query: 94 ALNETEFCILMVR 106
++ EF +M R
Sbjct: 62 TIDFPEFLTMMAR 74
>pdb|1AK8|A Chain A, Nmr Solution Structure Of Cerium-Loaded Calmodulin Amino-
Terminal Domain (Ce2-Tr1c), 23 Structures
Length = 76
Score = 28.1 bits (61), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Query: 34 VESFVSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREGDLDGDG 93
E ++E F L G IT L + + +G + T+ + + M+ E D DG+G
Sbjct: 6 TEEQIAEFKEAFSLFDKDGDGTITTKEL--GTVMRSLGQNP-TEAELQDMINEVDADGNG 62
Query: 94 ALNETEFCILMVR 106
++ EF +M R
Sbjct: 63 TIDFPEFLTMMAR 75
>pdb|2LVI|A Chain A, Solution Structure Of Apo-phl P 7
pdb|2LVJ|A Chain A, Solution Structure Of Hemi-mg-bound Phl P 7
pdb|2LVK|A Chain A, Solution Structure Of Ca-bound Phl P 7
Length = 77
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 76 TKEDAEAMVREGDLDGDGALNETEFCILMVRLSPGMMQDA 115
+ ++ + M+ E D DGDG ++ EF I +PG+M+D
Sbjct: 35 SADEVQRMMAEIDTDGDGFIDFNEF-ISFCNANPGLMKDV 73
>pdb|2O1C|A Chain A, Structure Of The E. Coli Dihydroneopterin Triphosphate
Pyrophosphohydrolase
pdb|2O1C|B Chain B, Structure Of The E. Coli Dihydroneopterin Triphosphate
Pyrophosphohydrolase
pdb|2O1C|C Chain C, Structure Of The E. Coli Dihydroneopterin Triphosphate
Pyrophosphohydrolase
pdb|2O1C|D Chain D, Structure Of The E. Coli Dihydroneopterin Triphosphate
Pyrophosphohydrolase
pdb|2O5W|A Chain A, Structure Of The E. Coli Dihydroneopterin Triphosphate
Pyrophosphohydrolase In Complex With Sm+3 And
Pyrophosphate
pdb|2O5W|B Chain B, Structure Of The E. Coli Dihydroneopterin Triphosphate
Pyrophosphohydrolase In Complex With Sm+3 And
Pyrophosphate
pdb|2O5W|C Chain C, Structure Of The E. Coli Dihydroneopterin Triphosphate
Pyrophosphohydrolase In Complex With Sm+3 And
Pyrophosphate
pdb|2O5W|D Chain D, Structure Of The E. Coli Dihydroneopterin Triphosphate
Pyrophosphohydrolase In Complex With Sm+3 And
Pyrophosphate
Length = 150
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 18/29 (62%)
Query: 100 FCILMVRLSPGMMQDAEAWLQKALDHQQQ 128
F L R +PG+ ++ E+W AL H++Q
Sbjct: 84 FSHLRHRYAPGVTRNTESWFCLALPHERQ 112
>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|B Chain B, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|C Chain C, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|D Chain D, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
Length = 147
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Query: 38 VSELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREGDLDGDGALNE 97
++E F L +SG I+ L + + +G+ E A+ M E D+DG+ A+
Sbjct: 10 IAEFKEAFALFDKDNSGSISASELA--TVMRSLGLSPSEAEVADLM-NEIDVDGNHAIEF 66
Query: 98 TEFCILMVR 106
+EF LM R
Sbjct: 67 SEFLALMSR 75
>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin C
In The Troponin C-Troponin I Complex
Length = 161
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%)
Query: 76 TKEDAEAMVREGDLDGDGALNETEFCILMVR 106
T E+ + M+ E D DG G ++ EF ++MVR
Sbjct: 53 TPEELQEMIDEVDEDGSGTVDFDEFLVMMVR 83
Score = 26.9 bits (58), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Query: 39 SELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREGDLDGDGALNET 98
EL FR+ G I L + +L + +T++D E ++++GD + DG ++
Sbjct: 95 EELSDLFRMFDKNADGYI---DLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYD 151
Query: 99 EFCILM 104
EF M
Sbjct: 152 EFLEFM 157
>pdb|1K9U|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
pdb|1K9U|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
Length = 78
Score = 28.1 bits (61), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 76 TKEDAEAMVREGDLDGDGALNETEFCILMVRLSPGMMQDA 115
+ ++ + M+ E D DGDG ++ EF I +PG+M+D
Sbjct: 36 SADEVQRMMAEIDTDGDGFIDFNEF-ISFCNANPGLMKDV 74
>pdb|2AAO|A Chain A, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
pdb|2AAO|B Chain B, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
Length = 166
Score = 27.7 bits (60), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 26/63 (41%), Gaps = 9/63 (14%)
Query: 41 LCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDA--EAMVREGDLDGDGALNET 98
L F SG ITP L+Q G+ ED E + R+ D D DG ++
Sbjct: 101 LFAAFTYFDKDGSGYITPDELQQACEEFGV-------EDVRIEELXRDVDQDNDGRIDYN 153
Query: 99 EFC 101
EF
Sbjct: 154 EFV 156
>pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean
Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The
Presence Of Ca2+ And The Junction Domain (Jd)
Length = 188
Score = 27.3 bits (59), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 5/64 (7%)
Query: 41 LCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREGDLDGDGALNETEF 100
L F SG IT ++Q A G+D + +D M++E D D DG ++ EF
Sbjct: 84 LVSAFSYFDKDGSGYITLDEIQQ--ACKDFGLDDIHIDD---MIKEIDQDNDGQIDYGEF 138
Query: 101 CILM 104
+M
Sbjct: 139 AAMM 142
>pdb|1TIZ|A Chain A, Solution Structure Of A Calmodulin-Like Calcium-Binding
Domain From Arabidopsis Thaliana
Length = 67
Score = 27.3 bits (59), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Query: 75 MTKEDAEAMVREGDLDGDGALNETEF--CI 102
T+ED E D+DG+G LN EF CI
Sbjct: 34 FTQEDIVKFFEEIDVDGNGELNADEFTSCI 63
>pdb|1IH0|A Chain A, Structure Of The C-Domain Of Human Cardiac Troponin C In
Complex With Ca2+ Sensitizer Emd 57033
Length = 71
Score = 27.3 bits (59), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Query: 40 ELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREGDLDGDGALNETE 99
EL FR+ G I L+ +L + +T++D E ++++GD + DG ++ E
Sbjct: 6 ELSDLFRMFDKNADGYIDLEELK---IMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 62
Query: 100 FCILM 104
F M
Sbjct: 63 FLEFM 67
>pdb|1QXP|A Chain A, Crystal Structure Of A Mu-Like Calpain
pdb|1QXP|B Chain B, Crystal Structure Of A Mu-Like Calpain
Length = 900
Score = 27.3 bits (59), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 19/35 (54%)
Query: 73 DGMTKEDAEAMVREGDLDGDGALNETEFCILMVRL 107
+G + E +MV D DG+G L EF IL R+
Sbjct: 572 NGFSLESCRSMVNLMDRDGNGKLGLVEFNILWNRI 606
>pdb|2KDH|A Chain A, The Solution Structure Of Human Cardiac Troponin C In
Complex With The Green Tea Polyphenol; (-)-
Epigallocatechin-3-Gallate
pdb|2L98|A Chain A, Structure Of Trans-Resveratrol In Complex With The Cardiac
Regulatory Protein Troponin C
Length = 72
Score = 26.9 bits (58), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Query: 40 ELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREGDLDGDGALNETE 99
EL FR+ G I L+ +L + +T++D E ++++GD + DG ++ E
Sbjct: 7 ELSDLFRMFDKNADGYIDLDELK---IMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 63
Query: 100 FCILM 104
F M
Sbjct: 64 FLEFM 68
>pdb|3CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 30
Structures
Length = 76
Score = 26.9 bits (58), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Query: 40 ELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREGDLDGDGALNETE 99
EL FR+ G I L + +L + +T++D E ++++GD + DG ++ E
Sbjct: 11 ELSDLFRMFDKNADGYI---DLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 67
Query: 100 FCILM 104
F M
Sbjct: 68 FLEFM 72
>pdb|1OZS|A Chain A, C-Domain Of Human Cardiac Troponin C In Complex With The
Inhibitory Region Of Human Cardiac Troponin I
Length = 73
Score = 26.9 bits (58), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Query: 40 ELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREGDLDGDGALNETE 99
EL FR+ G I L + +L + +T++D E ++++GD + DG ++ E
Sbjct: 8 ELSDLFRMFDKNADGYI---DLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 64
Query: 100 FCILM 104
F M
Sbjct: 65 FLEFM 69
>pdb|2AMI|A Chain A, Solution Structure Of The Calcium-Loaded N-Terminal Sensor
Domain Of Centrin
Length = 96
Score = 26.6 bits (57), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Query: 40 ELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREGDLDGDGALNETE 99
E+ F L SG I L+ A+ +G + KE+ + M+ E D DG G ++ E
Sbjct: 31 EIREAFDLFDTDGSGTIDAKELK--VAMRALGFEP-KKEEIKKMISEIDKDGSGTIDFEE 87
Query: 100 FCILMV 105
F +M
Sbjct: 88 FLTMMT 93
>pdb|1XKS|A Chain A, The Crystal Structure Of The N-Terminal Domain Of Nup133
Reveals A Beta-Propeller Fold Common To Several
Nucleoporins
Length = 450
Score = 26.6 bits (57), Expect = 3.7, Method: Composition-based stats.
Identities = 15/50 (30%), Positives = 30/50 (60%), Gaps = 6/50 (12%)
Query: 42 CGGFRLLADRDSGLITPGSLRQNSALLGMGMDG-----MTKEDAEAMVRE 86
CGG ++ R+SGL++ S R+N ++L ++G + ++E+M+ E
Sbjct: 393 CGGVPIIFSRNSGLVSITS-RENVSILAEDLEGSLASSVAGPNSESMIFE 441
>pdb|1FI5|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I.
pdb|1SBJ|A Chain A, Nmr Structure Of The Mg2+-Loaded C Terminal Domain Of
Cardiac Troponin C Bound To The N Terminal Domain Of
Cardiac Troponin I
pdb|1SCV|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I
Length = 81
Score = 26.6 bits (57), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Query: 40 ELCGGFRLLADRDSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREGDLDGDGALNETE 99
EL FR+ G I L + +L + +T++D E ++++GD + DG ++ E
Sbjct: 16 ELSDLFRMFDKNADGYI---DLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 72
Query: 100 FCILM 104
F M
Sbjct: 73 FLEFM 77
>pdb|2KGB|C Chain C, Nmr Solution Of The Regulatory Domain Cardiac
F77w-Troponin C In Complex With The Cardiac Troponin I
144-163 Switch Peptide
Length = 89
Score = 26.6 bits (57), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Query: 52 DSGLITPGSLRQNSALLGMGMDGMTKEDAEAMVREGDLDGDGALNETEFCILMVR 106
+ G I+ L + +LG T E+ + M+ E D DG G ++ E+ ++MVR
Sbjct: 32 EDGCISTKELGKVMRMLGQNP---TPEELQEMIDEVDEDGSGTVDFDEWLVMMVR 83
>pdb|3O4Y|A Chain A, Crystal Structure Of Cad Domain Of The Plasmodium Vivax
Cdpk, Pvx_11610
Length = 196
Score = 26.2 bits (56), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 40/93 (43%), Gaps = 5/93 (5%)
Query: 16 STGSEYEDLLPVMAEKLDVESFVSELCG-GFRLLADRDSGLITPGSLRQNSALLGMGMDG 74
S GS D +A +D +L FR+ + G IT L + G
Sbjct: 101 SDGSGNIDYTEFLAAAIDRRQLSKKLIYCAFRVFDVDNDGEITTAEL-AHVLFNGNKRGN 159
Query: 75 MTKEDA---EAMVREGDLDGDGALNETEFCILM 104
+T+ D + M+RE D +GDG ++ EF +M
Sbjct: 160 ITERDVNQVKKMIREVDKNGDGKIDFYEFSEMM 192
>pdb|3DF0|A Chain A, Calcium-Dependent Complex Between M-Calpain And
Calpastatin
pdb|3BOW|A Chain A, Structure Of M-Calpain In Complex With Calpastatin
Length = 714
Score = 26.2 bits (56), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 18/35 (51%)
Query: 73 DGMTKEDAEAMVREGDLDGDGALNETEFCILMVRL 107
DG + E + MV D DG G L EF IL ++
Sbjct: 570 DGFSIETCKIMVDMLDEDGSGKLGLKEFYILWTKI 604
>pdb|2FGT|A Chain A, Crystal Structure Of Yych From Bacillus Subtilis
Length = 417
Score = 26.2 bits (56), Expect = 4.9, Method: Composition-based stats.
Identities = 30/128 (23%), Positives = 52/128 (40%), Gaps = 10/128 (7%)
Query: 3 KSNNSSRTAKGTTSTGSEYEDLLPVMAEKLDVESFVSEL--CGGFRLLADRDSGLITPGS 60
K+ S+ A S GS+ E LLP +D + FV+E F+ D ++ S
Sbjct: 158 KNRQSNMPAFSLFSIGSKKEFLLPNKPLTMDKKEFVTESIKTNTFKQALFSDPSIVREDS 217
Query: 61 LRQNSALLGMGMDGMTKEDAEAMVREGDLDGDGALNETEFCI-LMVRLSPGMMQDAEAWL 119
N +L DG+++ D R+ + T + +++ S ++D +W
Sbjct: 218 NYNNRNVL---TDGISRLDVNLSQRQVQFQQRNLVQSTSYQTGELIKKSQKYLEDTGSW- 273
Query: 120 QKALDHQQ 127
DH Q
Sbjct: 274 ---TDHYQ 278
>pdb|1RTP|1 Chain 1, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RTP|2 Chain 2, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RTP|3 Chain 3, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RWY|A Chain A, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|1RWY|B Chain B, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|1RWY|C Chain C, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|2JWW|A Chain A, Calcium-Free Rat Alpha-Parvalbumin
Length = 109
Score = 26.2 bits (56), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 4/62 (6%)
Query: 45 FRLLADRDSGLITPGSLRQNSALLGMGMDG--MTKEDAEAMVREGDLDGDGALNETEFCI 102
F +L SG I L S L G D ++ ++ + ++ GD DGDG + EF
Sbjct: 47 FHILDKDKSGFIEEDEL--GSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEFST 104
Query: 103 LM 104
L+
Sbjct: 105 LV 106
>pdb|3F45|A Chain A, Structure Of The R75a Mutant Of Rat Alpha-Parvalbumin
Length = 109
Score = 26.2 bits (56), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 4/62 (6%)
Query: 45 FRLLADRDSGLITPGSLRQNSALLGMGMDG--MTKEDAEAMVREGDLDGDGALNETEFCI 102
F +L SG I L S L G D ++ ++ + ++ GD DGDG + EF
Sbjct: 47 FHILDKDKSGFIEEDEL--GSILKGFSSDAADLSAKETKTLMAAGDKDGDGKIGVEEFST 104
Query: 103 LM 104
L+
Sbjct: 105 LV 106
>pdb|1G33|A Chain A, Crystal Structure Of Rat Parvalbumin Without The
N-Terminal Domain
Length = 73
Score = 26.2 bits (56), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 4/62 (6%)
Query: 45 FRLLADRDSGLITPGSLRQNSALLGMGMDG--MTKEDAEAMVREGDLDGDGALNETEFCI 102
F +L SG I L S L G D ++ ++ + ++ GD DGDG + EF
Sbjct: 11 FHILDKDKSGFIEEDEL--GSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEFST 68
Query: 103 LM 104
L+
Sbjct: 69 LV 70
>pdb|2EBU|A Chain A, Solution Structure Of The Brct Domain From Human
Replication Factor C Large Subunit 1
Length = 112
Score = 25.8 bits (55), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 9/74 (12%)
Query: 48 LADRDSGLITPGSLRQNSALLGMGMD-GMTKEDAEAMVREGDLDGDGALNETEFCILMVR 106
L +R G +T G++ + + L MG D G +K D A + +D DG LN ++R
Sbjct: 45 LIERYGGKVT-GNVSKKTNYLVMGRDSGQSKSDKAAALGTKIIDEDGLLN-------LIR 96
Query: 107 LSPGMMQDAEAWLQ 120
PG E ++
Sbjct: 97 TMPGKKSKYEIAVE 110
>pdb|1KFX|L Chain L, Crystal Structure Of Human M-Calpain Form I
pdb|1KFU|L Chain L, Crystal Structure Of Human M-Calpain Form Ii
Length = 699
Score = 25.8 bits (55), Expect = 6.0, Method: Composition-based stats.
Identities = 14/35 (40%), Positives = 18/35 (51%)
Query: 73 DGMTKEDAEAMVREGDLDGDGALNETEFCILMVRL 107
DG + E + MV D DG G L EF IL ++
Sbjct: 569 DGFSIETCKIMVDMLDSDGSGKLGLKEFYILWTKI 603
>pdb|1U5I|A Chain A, Crystal Structure Analysis Of Rat M-Calpain Mutant Lys10
Thr
Length = 700
Score = 25.8 bits (55), Expect = 6.2, Method: Composition-based stats.
Identities = 14/35 (40%), Positives = 18/35 (51%)
Query: 73 DGMTKEDAEAMVREGDLDGDGALNETEFCILMVRL 107
DG + E + MV D DG G L EF IL ++
Sbjct: 570 DGFSIETCKIMVDMLDEDGSGKLGLKEFYILWTKI 604
>pdb|1DF0|A Chain A, Crystal Structure Of M-Calpain
Length = 700
Score = 25.8 bits (55), Expect = 6.2, Method: Composition-based stats.
Identities = 14/35 (40%), Positives = 18/35 (51%)
Query: 73 DGMTKEDAEAMVREGDLDGDGALNETEFCILMVRL 107
DG + E + MV D DG G L EF IL ++
Sbjct: 570 DGFSIETCKIMVDMLDEDGSGKLGLKEFYILWTKI 604
>pdb|2CCL|B Chain B, The S45a, T46a Mutant Of The Type I Cohesin-Dockerin
Complex From The Cellulosome Of Clostridium Thermocellum
pdb|2CCL|D Chain D, The S45a, T46a Mutant Of The Type I Cohesin-Dockerin
Complex From The Cellulosome Of Clostridium Thermocellum
Length = 63
Score = 25.8 bits (55), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 10/21 (47%), Positives = 15/21 (71%)
Query: 83 MVREGDLDGDGALNETEFCIL 103
MV GD++GDG +N T+ +L
Sbjct: 1 MVLLGDVNGDGTINSTDLTML 21
>pdb|2E30|A Chain A, Solution Structure Of The Cytoplasmic Region Of Na+H+
Exchanger 1 Complexed With Essential Cofactor
Calcineurin B Homologous Protein 1
Length = 195
Score = 25.4 bits (54), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 10/28 (35%), Positives = 19/28 (67%)
Query: 80 AEAMVREGDLDGDGALNETEFCILMVRL 107
A+ ++E D DGD A++ TEF ++ ++
Sbjct: 156 ADRTIQEADQDGDSAISFTEFVKVLEKV 183
>pdb|2CT9|A Chain A, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
pdb|2CT9|B Chain B, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
Length = 208
Score = 25.4 bits (54), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 10/28 (35%), Positives = 19/28 (67%)
Query: 80 AEAMVREGDLDGDGALNETEFCILMVRL 107
A+ ++E D DGD A++ TEF ++ ++
Sbjct: 156 ADRTIQEADQDGDSAISFTEFVKVLEKV 183
>pdb|2BEC|A Chain A, Crystal Structure Of Chp2 In Complex With Its Binding
Region In Nhe1 And Insights Into The Mechanism Of Ph
Regulation
Length = 202
Score = 25.4 bits (54), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 80 AEAMVREGDLDGDGALNETEFC 101
A+ V+E D DGDGA++ EF
Sbjct: 157 ADRTVQEADEDGDGAVSFVEFT 178
>pdb|1DGU|A Chain A, Homology-Based Model Of Calcium-Saturated Cib (Calcium-And
Integrin-Binding Protein)
pdb|1DGV|A Chain A, Homology-Based Model Of Apo Cib (Calcium-And Integrin-
Binding Protein)
pdb|1XO5|A Chain A, Crystal Structure Of Cib1, An Ef-Hand, Integrin And
Kinase- Binding Protein
pdb|1XO5|B Chain B, Crystal Structure Of Cib1, An Ef-Hand, Integrin And
Kinase- Binding Protein
pdb|1Y1A|A Chain A, Crystal Structure Of Calcium And Integrin Binding Protein
pdb|1Y1A|B Chain B, Crystal Structure Of Calcium And Integrin Binding Protein
Length = 183
Score = 25.4 bits (54), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 15/113 (13%)
Query: 7 SSRTAKGTTSTGSEYEDLLPVMAEKL--DVESFVSELCGGFRLLADRDSGLITPGSL-RQ 63
S+ AK + S ++ DLL V ++ D++S FR+ D G + L R
Sbjct: 70 STSPAKDSLS-FEDFLDLLSVFSDTATPDIKSHY-----AFRIFDFDDDGTLNREDLSRL 123
Query: 64 NSALLGMGMDGMT-----KEDAEAMVREGDLDGDGALNETEFCILMVRLSPGM 111
+ L G G D K+ + ++ E D+D DG +N +EF ++ R SP
Sbjct: 124 VNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVISR-SPDF 175
>pdb|2L4H|A Chain A, The Solution Structure Of Calcium Bound Cib1
pdb|2L4I|A Chain A, The Solution Structure Of Magnesium Bound Cib1
pdb|2LM5|A Chain A, Solution Structure Of Ca2+-Cib1 In Complex With The
Cytoplasmic Domain Of The Integrin Aiib Subunit
Length = 214
Score = 25.4 bits (54), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 15/113 (13%)
Query: 7 SSRTAKGTTSTGSEYEDLLPVMAEKL--DVESFVSELCGGFRLLADRDSGLITPGSL-RQ 63
S+ AK + S ++ DLL V ++ D++S FR+ D G + L R
Sbjct: 101 STSPAKDSLS-FEDFLDLLSVFSDTATPDIKSHY-----AFRIFDFDDDGTLNREDLSRL 154
Query: 64 NSALLGMGMDGM-----TKEDAEAMVREGDLDGDGALNETEFCILMVRLSPGM 111
+ L G G D K+ + ++ E D+D DG +N +EF ++ R SP
Sbjct: 155 VNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVISR-SPDF 206
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.313 0.130 0.363
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,716,297
Number of Sequences: 62578
Number of extensions: 137556
Number of successful extensions: 456
Number of sequences better than 100.0: 193
Number of HSP's better than 100.0 without gapping: 156
Number of HSP's successfully gapped in prelim test: 37
Number of HSP's that attempted gapping in prelim test: 225
Number of HSP's gapped (non-prelim): 263
length of query: 128
length of database: 14,973,337
effective HSP length: 87
effective length of query: 41
effective length of database: 9,529,051
effective search space: 390691091
effective search space used: 390691091
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 45 (21.9 bits)