BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033065
(128 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5I0K7|ALG13_RAT UDP-N-acetylglucosamine transferase subunit ALG13 homolog OS=Rattus
norvegicus GN=Alg13 PE=1 SV=1
Length = 165
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 72/125 (57%), Gaps = 2/125 (1%)
Query: 1 MGQGTYLPAESIGEDGLLAVDCFTFSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIV 60
+G+GT +P E +D + + S+ + L A LVISHAG+GS E+L GKPL+V
Sbjct: 41 IGRGTVVPEPFSTEP--FTLDVYRYKESLKEDLQQADLVISHAGAGSCLESLEKGKPLVV 98
Query: 61 VVNEDLMDNHQSELAEELADRKHLYCAHPQSLHQVIVGMDLKSLLPYQPGDATPVAKLIN 120
VVNE LM+NHQ ELA++L HL+ L ++ MDL +L Y PG + ++
Sbjct: 99 VVNEKLMNNHQFELAKQLHKEGHLFYCTCSMLPGLLQSMDLSTLKCYPPGQPEKFSAFLD 158
Query: 121 RFLGF 125
+ +G
Sbjct: 159 KVVGL 163
>sp|Q9D8C3|ALG13_MOUSE UDP-N-acetylglucosamine transferase subunit ALG13 homolog OS=Mus
musculus GN=Alg13 PE=2 SV=2
Length = 1166
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 56/88 (63%), Gaps = 3/88 (3%)
Query: 1 MGQGTYLPAESIGEDGLLAVDCFTFSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIV 60
+G+GT +P E +D + + S+ + L A LVISHAG+GS E+L GKPL+V
Sbjct: 41 VGRGTVVPKPFRTES--FTLDVYRYKDSLKEDLQQADLVISHAGAGSCLESLEKGKPLVV 98
Query: 61 VVNEDLMDNHQSELAEELADRKHL-YCA 87
VVNE LM+NHQ ELA++L HL YC
Sbjct: 99 VVNEKLMNNHQFELAKQLHKEGHLFYCT 126
>sp|Q9NP73|ALG13_HUMAN UDP-N-acetylglucosamine transferase subunit ALG13 homolog OS=Homo
sapiens GN=ALG13 PE=1 SV=2
Length = 1137
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 56/88 (63%), Gaps = 3/88 (3%)
Query: 1 MGQGTYLPAESIGEDGLLAVDCFTFSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIV 60
+G+GT +P E +D + + S+ + + A LVISHAG+GS ETL GKPL+V
Sbjct: 41 IGRGTVVPEPFSTES--FTLDVYRYKDSLKEDIQKADLVISHAGAGSCLETLEKGKPLVV 98
Query: 61 VVNEDLMDNHQSELAEELADRKHL-YCA 87
V+NE LM+NHQ ELA++L HL YC
Sbjct: 99 VINEKLMNNHQLELAKQLHKEGHLFYCT 126
>sp|Q6C3P1|ALG13_YARLI UDP-N-acetylglucosamine transferase subunit ALG13 OS=Yarrowia
lipolytica (strain CLIB 122 / E 150) GN=ALG13 PE=3 SV=1
Length = 196
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 54/74 (72%)
Query: 14 EDGLLAVDCFTFSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSE 73
++G++++ F ++ +A +S A LVISHAG+GS+ + LR+GK +VVVN LMDNHQ E
Sbjct: 81 KEGVMSITGFEYTDDLAGEMSRAHLVISHAGTGSVLDALRIGKHPVVVVNSKLMDNHQIE 140
Query: 74 LAEELADRKHLYCA 87
+AEEL ++HL +
Sbjct: 141 IAEELFRKRHLLVS 154
>sp|O14190|ALG13_SCHPO UDP-N-acetylglucosamine transferase subunit alg13
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=alg13 PE=3 SV=1
Length = 162
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 61/103 (59%)
Query: 18 LAVDCFTFSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEE 77
L + F ++ I ++ AS+VISHAG+GSI +TLR GK L+VV NE LMDNHQ ELA +
Sbjct: 56 LTILGFDYAPEIESYIHDASIVISHAGAGSILQTLRSGKRLLVVPNESLMDNHQVELATK 115
Query: 78 LADRKHLYCAHPQSLHQVIVGMDLKSLLPYQPGDATPVAKLIN 120
LA +L +L + + + K L P+ D + K++
Sbjct: 116 LASMNYLVTCSTSNLVEGLEELYPKILTPFPKSDCSTFQKVMQ 158
>sp|Q5ABE5|ALG13_CANAL UDP-N-acetylglucosamine transferase subunit ALG13 OS=Candida
albicans (strain SC5314 / ATCC MYA-2876) GN=ALG13 PE=3
SV=1
Length = 293
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 50/71 (70%), Gaps = 2/71 (2%)
Query: 18 LAVDCFTFSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEE 77
+ + F++SS+I ++ + L+ISHAG+GSI + L L KPLIV+VN+ LMDNHQ E+A++
Sbjct: 169 IEILAFSYSSNINKYIENVDLIISHAGTGSIIDCLHLNKPLIVIVNDKLMDNHQLEIAQQ 228
Query: 78 LADRKHLYCAH 88
K YC +
Sbjct: 229 FT--KLNYCIY 237
>sp|Q6BST1|ALG13_DEBHA UDP-N-acetylglucosamine transferase subunit ALG13 OS=Debaryomyces
hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC
0083 / IGC 2968) GN=ALG13 PE=3 SV=2
Length = 212
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 51/81 (62%), Gaps = 9/81 (11%)
Query: 23 FTFSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRK 82
F FS+ I +S + +VISHAG+GSI +TLRL KPLIVV N+ LM+ HQ E+A+EL
Sbjct: 103 FPFSNDIGSFISESDVVISHAGTGSIIDTLRLEKPLIVVTNDKLMNKHQEEVADELV--- 159
Query: 83 HLYCAHPQSLHQVIVGMDLKS 103
L C ++ D+KS
Sbjct: 160 KLGCCRKMTIE------DMKS 174
>sp|P53178|ALG13_YEAST UDP-N-acetylglucosamine transferase subunit ALG13 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=ALG13 PE=1
SV=1
Length = 202
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 51/76 (67%), Gaps = 1/76 (1%)
Query: 15 DGLLAVDCFTFSSSIADHLSSAS-LVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSE 73
+G L V F FS+ + + S LVISHAG+GSI ++LRL KPLIV VN+ LMDNHQ +
Sbjct: 89 NGKLKVIGFDFSTKMQSIIRDYSDLVISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQ 148
Query: 74 LAEELADRKHLYCAHP 89
+A++ + +++ P
Sbjct: 149 IADKFVELGYVWSCAP 164
>sp|Q6CXY0|ALG13_KLULA UDP-N-acetylglucosamine transferase subunit ALG13 OS=Kluyveromyces
lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC
1267 / NRRL Y-1140 / WM37) GN=ALG13 PE=3 SV=1
Length = 197
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 48/70 (68%), Gaps = 1/70 (1%)
Query: 23 FTFSSSIADHLSS-ASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADR 81
F FS I +++ LVISHAG+GSI ++LR+GK LIVVVN+ LMDNHQ +A++ +
Sbjct: 92 FEFSHDIEKLIANNIDLVISHAGTGSILDSLRVGKKLIVVVNDTLMDNHQQLIADKFEQQ 151
Query: 82 KHLYCAHPQS 91
K L+ H +
Sbjct: 152 KLLWSVHANT 161
>sp|Q4WQN1|ALG13_ASPFU UDP-N-acetylglucosamine transferase subunit alg13 OS=Neosartorya
fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 /
FGSC A1100) GN=alg13 PE=3 SV=2
Length = 197
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 43/62 (69%)
Query: 35 SASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYCAHPQSLHQ 94
S LVISHAGSG+I E LR+G PLIVV N L DNHQ ELA +L + ++ +H Q+L Q
Sbjct: 97 SGGLVISHAGSGTILEVLRMGIPLIVVPNPSLQDNHQEELARQLQKQGYVVASHYQNLCQ 156
Query: 95 VI 96
+
Sbjct: 157 AL 158
>sp|Q6FVR6|ALG13_CANGA UDP-N-acetylglucosamine transferase subunit ALG13 OS=Candida
glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC
0622 / NRRL Y-65) GN=ALG13 PE=3 SV=1
Length = 198
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Query: 23 FTFSSSIADHLSS-ASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADR 81
F +S++I + +VISHAG+GSI ++LRL K LIVVVN LMDNHQ ++AE+ +
Sbjct: 93 FAYSNNILQIIDRYGDVVISHAGTGSILDSLRLNKKLIVVVNHTLMDNHQKQIAEKFQNL 152
Query: 82 KHLYCAHPQSL 92
H+ +P ++
Sbjct: 153 GHILATNPTAI 163
>sp|Q750J3|ALG13_ASHGO UDP-N-acetylglucosamine transferase subunit ALG13 OS=Ashbya
gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 /
NRRL Y-1056) GN=ALG13 PE=3 SV=1
Length = 203
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
Query: 34 SSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHLYC--AHPQS 91
+SA+LV+SHAG+GSI + LR KPLIV VNE L+DNHQ ++A HL+ A
Sbjct: 110 TSAALVVSHAGTGSILDALRQQKPLIVCVNEALLDNHQEQIARRFEALGHLWAIRADVDE 169
Query: 92 LHQVIVGMDLKSLLPYQPGDATPVAKLIN 120
L + ++L P P A+L+
Sbjct: 170 LAGALARSTRETLAPLPPAYKQGFAELLQ 198
>sp|P0CN88|ALG13_CRYNJ UDP-N-acetylglucosamine transferase subunit ALG13 OS=Cryptococcus
neoformans var. neoformans serotype D (strain JEC21 /
ATCC MYA-565) GN=ALG13 PE=3 SV=1
Length = 200
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 18 LAVDCFTFSSSIADHLSSASLVISHAGSGSIFETLRLGKP--LIVVVNEDLMDNHQSELA 75
+ V+ F++ + + VISHAGSGSI LR P L+VV N LMD+HQSELA
Sbjct: 87 MVVEVMRFTNDFEGLVGKSDAVISHAGSGSILTVLRRAPPIPLLVVPNRSLMDDHQSELA 146
Query: 76 EELADRKHLYCAHPQSLHQVI 96
+ L ++ A + L + +
Sbjct: 147 DALYKDGYVMVASVEDLEEKV 167
>sp|P0CN89|ALG13_CRYNB UDP-N-acetylglucosamine transferase subunit ALG13 OS=Cryptococcus
neoformans var. neoformans serotype D (strain B-3501A)
GN=ALG13 PE=3 SV=1
Length = 200
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 18 LAVDCFTFSSSIADHLSSASLVISHAGSGSIFETLRLGKP--LIVVVNEDLMDNHQSELA 75
+ V+ F++ + + VISHAGSGSI LR P L+VV N LMD+HQSELA
Sbjct: 87 MVVEVMRFTNDFEGLVGKSDAVISHAGSGSILTVLRRAPPIPLLVVPNRSLMDDHQSELA 146
Query: 76 EELADRKHLYCAHPQSLHQVI 96
+ L ++ A + L + +
Sbjct: 147 DALYKDGYVMVASVEDLEEKV 167
>sp|Q39YL9|MURG_GEOMG UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)
pyrophosphoryl-undecaprenol N-acetylglucosamine
transferase OS=Geobacter metallireducens (strain GS-15 /
ATCC 53774 / DSM 7210) GN=murG PE=3 SV=1
Length = 364
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 43/92 (46%)
Query: 14 EDGLLAVDCFTFSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSE 73
E+ +A D F S+AD A LV+ AG+ +I E GKP I + +D+HQ
Sbjct: 236 EEQGVAADVVAFIDSMADAYRWADLVVCRAGATTIAEITACGKPCIFIPYPHAVDDHQRR 295
Query: 74 LAEELADRKHLYCAHPQSLHQVIVGMDLKSLL 105
AE L R + Q L ++ ++ L+
Sbjct: 296 NAEALLKRGAGFVIIEQELSGEVLAKTIRDLM 327
>sp|Q748D6|MURG_GEOSL UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)
pyrophosphoryl-undecaprenol N-acetylglucosamine
transferase OS=Geobacter sulfurreducens (strain ATCC
51573 / DSM 12127 / PCA) GN=murG PE=3 SV=1
Length = 364
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 1/92 (1%)
Query: 14 EDGLLAVDCFTFSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSE 73
E G A D F S+AD A L++ AG+ ++ E GKP I + +D+HQ
Sbjct: 237 EQGFTA-DVVAFIDSMADAYRWADLIVCRAGATTLAEVTACGKPCIFIPYPHAVDDHQRR 295
Query: 74 LAEELADRKHLYCAHPQSLHQVIVGMDLKSLL 105
AE L R + Q L ++ ++ L+
Sbjct: 296 NAESLLKRGAGFVIIEQELSGEVLAQAIRDLM 327
>sp|A6L071|MURG_BACV8 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)
pyrophosphoryl-undecaprenol N-acetylglucosamine
transferase OS=Bacteroides vulgatus (strain ATCC 8482 /
DSM 1447 / NCTC 11154) GN=murG PE=3 SV=1
Length = 376
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 38/57 (66%)
Query: 25 FSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADR 81
F S +A S+A L+IS AG+GSI E L KP+I+V + ++ ++HQ++ A L ++
Sbjct: 255 FISDMAAAYSAADLIISRAGAGSISEFCLLQKPVILVPSPNVAEDHQTKNALALVNK 311
>sp|A6LEU3|MURG_PARD8 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)
pyrophosphoryl-undecaprenol N-acetylglucosamine
transferase OS=Parabacteroides distasonis (strain ATCC
8503 / DSM 20701 / NCTC 11152) GN=murG PE=3 SV=1
Length = 368
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 37/58 (63%)
Query: 18 LAVDCFTFSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELA 75
+ V C F + + S+A LVIS AG+ SI E LGKP+++V + ++ ++HQ++ A
Sbjct: 246 MPVWCSDFITRMDYAYSAADLVISRAGASSISELCLLGKPVVLVPSPNVAEDHQTKNA 303
>sp|Q4ULT6|MURG_RICFE UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)
pyrophosphoryl-undecaprenol N-acetylglucosamine
transferase OS=Rickettsia felis (strain ATCC VR-1525 /
URRWXCal2) GN=murG PE=3 SV=1
Length = 360
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 35/68 (51%)
Query: 25 FSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHL 84
F ++A A LVIS AG+ +I E +G P I + DNHQ A+ LAD+K
Sbjct: 248 FFDNMALKYKEADLVISRAGASTIEELTYIGLPAIFIPLPSAADNHQYYNAKLLADKKAG 307
Query: 85 YCAHPQSL 92
+C S+
Sbjct: 308 WCLEQNSI 315
>sp|Q68WW7|MURG_RICTY UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)
pyrophosphoryl-undecaprenol N-acetylglucosamine
transferase OS=Rickettsia typhi (strain ATCC VR-144 /
Wilmington) GN=murG PE=3 SV=1
Length = 385
Score = 41.6 bits (96), Expect = 0.001, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 33/62 (53%)
Query: 25 FSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHL 84
F +IA A+LVIS AG+ +I E +G P I + DNHQ A+ LAD K
Sbjct: 271 FFDNIALQYKVANLVISRAGASTIEELTYIGLPTIFIPLPSAADNHQYYNAKLLADNKAG 330
Query: 85 YC 86
+C
Sbjct: 331 WC 332
>sp|A8GNC7|MURG_RICAH UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)
pyrophosphoryl-undecaprenol N-acetylglucosamine
transferase OS=Rickettsia akari (strain Hartford)
GN=murG PE=3 SV=1
Length = 382
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 34/66 (51%)
Query: 21 DCFTFSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELAD 80
+C F ++A A +VIS AG+ +I E +G P I + DNHQ A+ L D
Sbjct: 261 ECAEFFDNMALQYKEADVVISRAGASTIEELTYIGLPAIFIPLPSAADNHQYYNAKLLED 320
Query: 81 RKHLYC 86
+K +C
Sbjct: 321 KKAGWC 326
>sp|Q8A258|MURG_BACTN UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)
pyrophosphoryl-undecaprenol N-acetylglucosamine
transferase OS=Bacteroides thetaiotaomicron (strain ATCC
29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482) GN=murG
PE=3 SV=1
Length = 372
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 38/58 (65%)
Query: 25 FSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRK 82
F +A +++ LVIS AG+GSI E L KP+++V + ++ ++HQ++ A L D++
Sbjct: 256 FIKDMAAAYAASDLVISRAGAGSISEFCLLHKPVVLVPSPNVAEDHQTKNALALVDKQ 313
>sp|Q7V388|MURG_PROMP UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)
pyrophosphoryl-undecaprenol N-acetylglucosamine
transferase OS=Prochlorococcus marinus subsp. pastoris
(strain CCMP1986 / MED4) GN=murG PE=3 SV=1
Length = 364
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 33/51 (64%)
Query: 25 FSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELA 75
F++ IA + + LVIS +G+G+I E ++ GKP I++ + +NHQ + A
Sbjct: 240 FTNQIASLMQNCELVISRSGAGTINELIQTGKPSILIPYPNSKNNHQEKNA 290
>sp|A8GRZ6|MURG_RICRS UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)
pyrophosphoryl-undecaprenol N-acetylglucosamine
transferase OS=Rickettsia rickettsii (strain Sheila
Smith) GN=murG PE=3 SV=1
Length = 376
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 32/62 (51%)
Query: 25 FSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHL 84
F ++A A LVIS AG+ +I E +G P I + DNHQ A+ LAD K
Sbjct: 264 FFDNMALQYKEADLVISRAGASTIEELTYIGLPAIFIPLPSAADNHQYYNAQLLADEKTG 323
Query: 85 YC 86
+C
Sbjct: 324 WC 325
>sp|B0BXF6|MURG_RICRO UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)
pyrophosphoryl-undecaprenol N-acetylglucosamine
transferase OS=Rickettsia rickettsii (strain Iowa)
GN=murG PE=3 SV=1
Length = 376
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 32/62 (51%)
Query: 25 FSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHL 84
F ++A A LVIS AG+ +I E +G P I + DNHQ A+ LAD K
Sbjct: 264 FFDNMALQYKEADLVISRAGASTIEELTYIGLPAIFIPLPSAADNHQYYNAQLLADEKTG 323
Query: 85 YC 86
+C
Sbjct: 324 WC 325
>sp|B4RFS0|MURG_PHEZH UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)
pyrophosphoryl-undecaprenol N-acetylglucosamine
transferase OS=Phenylobacterium zucineum (strain HLK1)
GN=murG PE=3 SV=1
Length = 365
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 34/67 (50%)
Query: 14 EDGLLAVDCFTFSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSE 73
D L+ + F IA L A LV+ AG+G++ E GKP I+V +D+ Q +
Sbjct: 238 RDALVDAEIAPFFRDIAGRLREAHLVVGRAGAGTVCEFAIAGKPSILVPLAIALDDDQGQ 297
Query: 74 LAEELAD 80
A LAD
Sbjct: 298 NARLLAD 304
>sp|Q0BXU2|MURG_HYPNA UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)
pyrophosphoryl-undecaprenol N-acetylglucosamine
transferase OS=Hyphomonas neptunium (strain ATCC 15444)
GN=murG PE=3 SV=1
Length = 366
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
Query: 20 VDC--FTFSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEE 77
++C F + + L++A LVI+ +G+G++ E +G+P I++ MD+HQ+ AE
Sbjct: 244 IECELAAFFGDMPERLAAAHLVIARSGAGTVSELATVGRPSILIPLAIAMDDHQAANAEA 303
Query: 78 L 78
L
Sbjct: 304 L 304
>sp|A2BUH4|MURG_PROM5 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)
pyrophosphoryl-undecaprenol N-acetylglucosamine
transferase OS=Prochlorococcus marinus (strain MIT 9515)
GN=murG PE=3 SV=1
Length = 364
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 46/95 (48%)
Query: 25 FSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHL 84
F++ IA + + LVIS +G+G+I E ++ KP I+V + +NHQ + A L+
Sbjct: 240 FTNQIASLMQNCDLVISRSGAGTINELIQTKKPSILVPYPNSKNNHQEKNAIILSSIGGA 299
Query: 85 YCAHPQSLHQVIVGMDLKSLLPYQPGDATPVAKLI 119
+ + +V LK + + P +++
Sbjct: 300 ILINQDKISKVFFQETLKRIFKVKKNKGKPTYEIL 334
>sp|Q58652|Y1255_METJA Uncharacterized glycosyltransferase MJ1255 OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=MJ1255 PE=3 SV=2
Length = 394
Score = 39.7 bits (91), Expect = 0.006, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 20 VDCFTFSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELA 79
V+ ++++ + + +A L++SH G +I E L GKPLIV+ DL Q A+++
Sbjct: 252 VEIIPITTNMKELIKNAELIVSHGGHSTIMEALSFGKPLIVI--PDLDHPEQGNNAKKVH 309
Query: 80 D 80
D
Sbjct: 310 D 310
>sp|Q9ZDC0|MURG_RICPR UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)
pyrophosphoryl-undecaprenol N-acetylglucosamine
transferase OS=Rickettsia prowazekii (strain Madrid E)
GN=murG PE=3 SV=1
Length = 385
Score = 39.7 bits (91), Expect = 0.006, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 32/62 (51%)
Query: 25 FSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHL 84
F +IA A+LVIS AG+ +I E +G P I + DNHQ A+ L D K
Sbjct: 271 FFDNIALQYKVANLVISRAGASTIEELTYIGLPAIFIPLPSAADNHQYYNAKLLEDNKAG 330
Query: 85 YC 86
+C
Sbjct: 331 WC 332
>sp|Q9RNM6|MURG_ZYMMO UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)
pyrophosphoryl-undecaprenol N-acetylglucosamine
transferase OS=Zymomonas mobilis subsp. mobilis (strain
ATCC 31821 / ZM4 / CP4) GN=murG PE=3 SV=2
Length = 387
Score = 39.3 bits (90), Expect = 0.007, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 32/61 (52%)
Query: 18 LAVDCFTFSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEE 77
+ D T+ + + L + LVIS AG+ +I E G+P I++ MDNHQ A E
Sbjct: 243 IPADISTYMADLPQRLGWSHLVISRAGASTIAELGVAGRPAILIPYPAAMDNHQYANARE 302
Query: 78 L 78
L
Sbjct: 303 L 303
>sp|B1ZU31|MURG_OPITP UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)
pyrophosphoryl-undecaprenol N-acetylglucosamine
transferase OS=Opitutus terrae (strain DSM 11246 /
PB90-1) GN=murG PE=3 SV=1
Length = 377
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 30/52 (57%)
Query: 20 VDCFTFSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQ 71
+ TF + + LS+A LV+S AG+G+I E +R P I+V D+HQ
Sbjct: 244 IQFLTFCDCVPELLSAADLVLSRAGAGTIAELVRCETPAILVPFPQAADDHQ 295
>sp|A8EZ14|MURG_RICCK UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)
pyrophosphoryl-undecaprenol N-acetylglucosamine
transferase OS=Rickettsia canadensis (strain McKiel)
GN=murG PE=3 SV=1
Length = 354
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 33/68 (48%)
Query: 25 FSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHL 84
F +IA A LVIS AG+ +I E +G P I + DNHQ A+ L D K
Sbjct: 242 FFDNIALQYKDADLVISRAGASTIEELTYIGLPAIFIPLPSAADNHQYYNAKWLEDTKAG 301
Query: 85 YCAHPQSL 92
+C ++
Sbjct: 302 WCLEQNNI 309
>sp|Q1RI55|MURG_RICBR UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)
pyrophosphoryl-undecaprenol N-acetylglucosamine
transferase OS=Rickettsia bellii (strain RML369-C)
GN=murG PE=3 SV=1
Length = 356
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 32/62 (51%)
Query: 25 FSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHL 84
F ++A+ + LVIS AG+ +I E +G P I + DNHQ A+ L D K
Sbjct: 244 FFDNMANQYKNTDLVISRAGASTIEELTYIGLPAIFIPLPSAADNHQYHNAKLLEDEKCG 303
Query: 85 YC 86
+C
Sbjct: 304 WC 305
>sp|A8GVJ7|MURG_RICB8 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)
pyrophosphoryl-undecaprenol N-acetylglucosamine
transferase OS=Rickettsia bellii (strain OSU 85-389)
GN=murG PE=3 SV=1
Length = 356
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 32/62 (51%)
Query: 25 FSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHL 84
F ++A+ + LVIS AG+ +I E +G P I + DNHQ A+ L D K
Sbjct: 244 FFDNMANQYKNTDLVISRAGASTIEELTYIGLPAIFIPLPSAADNHQYHNAKLLEDEKCG 303
Query: 85 YC 86
+C
Sbjct: 304 WC 305
>sp|A3PHS8|MURG_RHOS1 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)
pyrophosphoryl-undecaprenol N-acetylglucosamine
transferase OS=Rhodobacter sphaeroides (strain ATCC
17029 / ATH 2.4.9) GN=murG PE=3 SV=1
Length = 364
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 10 ESIGEDGLLAVDCFTFSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDN 69
E+ GLLA + TF + I LS A LVIS +G+ S+ + +G+P I+V +
Sbjct: 233 EAYDRAGLLA-EVKTFFTDIPRRLSEAQLVISRSGASSVADISIIGRPAILVPFAAATAD 291
Query: 70 HQSELAEELAD 80
HQ+ A L +
Sbjct: 292 HQTANARGLVE 302
>sp|A7GRN6|MURG_BACCN UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)
pyrophosphoryl-undecaprenol N-acetylglucosamine
transferase OS=Bacillus cereus subsp. cytotoxis (strain
NVH 391-98) GN=murG PE=3 SV=1
Length = 364
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 35/57 (61%)
Query: 25 FSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADR 81
F ++ + L+ LV+S AG+ ++ E LGKP I++ + + +NHQ + A+ + D+
Sbjct: 249 FIHNMPEVLTGVDLVVSRAGATTLAELTALGKPSILIPSPYVTNNHQEKNAKSIVDK 305
>sp|A4XI04|MURG_CALS8 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)
pyrophosphoryl-undecaprenol N-acetylglucosamine
transferase OS=Caldicellulosiruptor saccharolyticus
(strain ATCC 43494 / DSM 8903) GN=murG PE=3 SV=1
Length = 370
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%)
Query: 20 VDCFTFSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEEL 78
+ + S + +L++A +VIS AG+ +I E LGKP I+V + + +NHQ A+ L
Sbjct: 250 IKILPYISDMPRYLAAADIVISRAGAIAISEITALGKPSIIVPSPYVANNHQEYNAKAL 308
>sp|Q3J4M2|MURG_RHOS4 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)
pyrophosphoryl-undecaprenol N-acetylglucosamine
transferase OS=Rhodobacter sphaeroides (strain ATCC
17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=murG PE=3 SV=1
Length = 364
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 10 ESIGEDGLLAVDCFTFSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDN 69
E+ GLLA + TF + I LS A LVIS +G+ S+ + +G+P I+V +
Sbjct: 233 EAYDRAGLLA-EVKTFFTDIPRRLSEAQLVISRSGASSVADISIIGRPAILVPFAAATAD 291
Query: 70 HQSELAEELAD 80
HQ+ A L +
Sbjct: 292 HQTANARGLVE 302
>sp|C4K2A6|MURG_RICPU UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)
pyrophosphoryl-undecaprenol N-acetylglucosamine
transferase OS=Rickettsia peacockii (strain Rustic)
GN=murG PE=3 SV=1
Length = 376
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 33/68 (48%)
Query: 25 FSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHL 84
F ++A A LVIS AG+ +I E +G P I + DNHQ A+ L D K
Sbjct: 264 FFDNMALQYKEADLVISRAGASTIEELTYIGLPAIFIPLPSAADNHQYYNAQLLEDEKTG 323
Query: 85 YCAHPQSL 92
+C ++
Sbjct: 324 WCLEQNNI 331
>sp|C3PND5|MURG_RICAE UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)
pyrophosphoryl-undecaprenol N-acetylglucosamine
transferase OS=Rickettsia africae (strain ESF-5) GN=murG
PE=3 SV=1
Length = 376
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 33/68 (48%)
Query: 25 FSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHL 84
F ++A A LVIS AG+ +I E +G P I + DNHQ A+ L D K
Sbjct: 264 FFDNMALQYKEADLVISRAGASTIEELTYIGLPAIFIPLPSAADNHQYYNAQLLEDEKTG 323
Query: 85 YCAHPQSL 92
+C ++
Sbjct: 324 WCLEQNNI 331
>sp|Q31CY4|MURG_PROM9 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)
pyrophosphoryl-undecaprenol N-acetylglucosamine
transferase OS=Prochlorococcus marinus (strain MIT 9312)
GN=murG PE=3 SV=1
Length = 363
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 34/56 (60%)
Query: 25 FSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELAD 80
F++ IA + + LVIS +G+G+I E + KP I++ D +NHQ + A LA+
Sbjct: 239 FTNEIAALIQNCDLVISRSGAGTINELIEAEKPSILIPYPDSKNNHQEKNALILAE 294
>sp|Q92I58|MURG_RICCN UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)
pyrophosphoryl-undecaprenol N-acetylglucosamine
transferase OS=Rickettsia conorii (strain ATCC VR-613 /
Malish 7) GN=murG PE=3 SV=1
Length = 376
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 31/62 (50%)
Query: 25 FSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHL 84
F ++A A LVIS AG+ +I E +G P I + DNHQ A+ L D K
Sbjct: 264 FFDNMALQYKEADLVISRAGASTIEELTYIGLPAIFIPLPSAADNHQYYNAQLLEDEKTG 323
Query: 85 YC 86
+C
Sbjct: 324 WC 325
>sp|Q7MAW5|MURG_PORGI UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)
pyrophosphoryl-undecaprenol N-acetylglucosamine
transferase OS=Porphyromonas gingivalis (strain ATCC
BAA-308 / W83) GN=murG PE=3 SV=1
Length = 379
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 32/47 (68%)
Query: 35 SASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADR 81
+A LV+S AG+ SI E LGKP I+V + ++ ++HQ++ A L+ R
Sbjct: 270 AADLVVSRAGACSISELCLLGKPTILVPSPNVAEDHQTKNALALSTR 316
>sp|Q0BV25|MURG_GRABC UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)
pyrophosphoryl-undecaprenol N-acetylglucosamine
transferase OS=Granulibacter bethesdensis (strain ATCC
BAA-1260 / CGDNIH1) GN=murG PE=3 SV=1
Length = 384
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
Query: 25 FSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHL 84
F + +A ++ A LVI+ AG+ ++ E +G+P I+V +D+HQ+ A L D +
Sbjct: 255 FFTDVATLIADAHLVIARAGASTVAELATIGRPAIMVPLPGAIDDHQTANARILVDAQGG 314
Query: 85 YCAH-----PQSLHQVIVGM 99
+ P +L I G+
Sbjct: 315 WMIRQPDFTPDTLAARIAGL 334
>sp|B2RIF1|MURG_PORG3 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)
pyrophosphoryl-undecaprenol N-acetylglucosamine
transferase OS=Porphyromonas gingivalis (strain ATCC
33277 / DSM 20709 / JCM 12257) GN=murG PE=3 SV=1
Length = 379
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 32/47 (68%)
Query: 35 SASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADR 81
+A LV+S AG+ SI E LGKP I+V + ++ ++HQ++ A L+ R
Sbjct: 270 AADLVVSRAGACSISELCLLGKPTILVPSPNVAEDHQTKNALALSTR 316
>sp|Q1CSB1|MURG_HELPH UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)
pyrophosphoryl-undecaprenol N-acetylglucosamine
transferase OS=Helicobacter pylori (strain HPAG1)
GN=murG PE=3 SV=1
Length = 353
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 44/95 (46%), Gaps = 6/95 (6%)
Query: 14 EDGLL-AVDCFTFSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQS 72
E GLL ++ F F ++I + + A L +S AG+ S++E G P I + +NHQ
Sbjct: 225 ELGLLDKIELFAFHNNITEVMHRADLCVSRAGASSVWELCANGLPTIFIPYPFASNNHQY 284
Query: 73 ELAEELADRKHLYCAH-----PQSLHQVIVGMDLK 102
E Y A P+ L +VI ++ K
Sbjct: 285 YNVLEFEKENLCYVAPQNELLPKKLFEVIRKLNQK 319
>sp|B3CRE9|MURG_ORITI UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)
pyrophosphoryl-undecaprenol N-acetylglucosamine
transferase OS=Orientia tsutsugamushi (strain Ikeda)
GN=murG PE=3 SV=1
Length = 359
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%)
Query: 25 FSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHL 84
F +IAD ++ L I AG+ +I E + L +P I+V NHQ A+ +AD K
Sbjct: 245 FFYNIADKYKNSHLAICRAGASTISEIISLCQPAILVPYPISAQNHQLFNAKAIADNKAG 304
Query: 85 YCAHPQSL 92
+C ++
Sbjct: 305 WCIEQSTI 312
>sp|A5CEL6|MURG_ORITB UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)
pyrophosphoryl-undecaprenol N-acetylglucosamine
transferase OS=Orientia tsutsugamushi (strain Boryong)
GN=murG PE=3 SV=1
Length = 359
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%)
Query: 25 FSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELADRKHL 84
F +IAD ++ L I AG+ +I E + L +P I+V NHQ A+ +AD K
Sbjct: 245 FFYNIADKYKNSHLAICRAGASTISEIISLCQPAILVPYPVSAQNHQLFNAKAIADNKAG 304
Query: 85 YCAHPQSL 92
+C ++
Sbjct: 305 WCIEQSTI 312
>sp|Q3AVX2|MURG_SYNS9 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)
pyrophosphoryl-undecaprenol N-acetylglucosamine
transferase OS=Synechococcus sp. (strain CC9902) GN=murG
PE=3 SV=1
Length = 358
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 43/103 (41%), Gaps = 1/103 (0%)
Query: 20 VDCFTFSSSIADHLSSASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELAEELA 79
V+C FS I L A L IS AG+GS+ E G P I+V D HQ A A
Sbjct: 232 VEC-RFSDDIPGLLQHADLAISRAGAGSLSELAVCGTPSILVPFPQAADQHQDANAACAA 290
Query: 80 DRKHLYCAHPQSLHQVIVGMDLKSLLPYQPGDATPVAKLINRF 122
+ H +G +K LL + GD +L+ +
Sbjct: 291 ELGGAVIVHQHPPGHPALGNSIKRLLGARLGDTDSRPELLEQM 333
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.137 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,474,901
Number of Sequences: 539616
Number of extensions: 1821100
Number of successful extensions: 5491
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 353
Number of HSP's successfully gapped in prelim test: 35
Number of HSP's that attempted gapping in prelim test: 5133
Number of HSP's gapped (non-prelim): 389
length of query: 128
length of database: 191,569,459
effective HSP length: 94
effective length of query: 34
effective length of database: 140,845,555
effective search space: 4788748870
effective search space used: 4788748870
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)