BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>033067
MATSLMTMPQFSGLRPQISAAPAQSLVAAQPMRRKCSGALGARCGFIGSPTNLIMVTTTT
LMLFAGRFGLAPSANRKATAGLKLEVRDSGLQTGDPAGFTLADTLACGSVGHIIGVGVVL
GLKNLGAL

High Scoring Gene Products

Symbol, full name Information P value
PSAK
AT1G30380 		protein from Arabidopsis thaliana 1.6e-40

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  033067
        (128 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2204207 - symbol:PSAK "AT1G30380" species:3702...   431  1.6e-40   1


>TAIR|locus:2204207 [details] [associations]
            symbol:PSAK "AT1G30380" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0009507
            "chloroplast" evidence=ISM;IDA] [GO:0009522 "photosystem I"
            evidence=IEA;ISS] [GO:0015979 "photosynthesis" evidence=IEA;ISS]
            [GO:0016020 "membrane" evidence=IEA;ISS] [GO:0009535 "chloroplast
            thylakoid membrane" evidence=IDA] [GO:0009579 "thylakoid"
            evidence=IDA] [GO:0009534 "chloroplast thylakoid" evidence=IDA]
            [GO:0019344 "cysteine biosynthetic process" evidence=RCA]
            [GO:0030003 "cellular cation homeostasis" evidence=RCA] [GO:0070838
            "divalent metal ion transport" evidence=RCA] InterPro:IPR000549
            InterPro:IPR023618 Pfam:PF01241 PROSITE:PS01026 GO:GO:0016021
            EMBL:CP002684 GenomeReviews:CT485782_GR EMBL:AC025295 GO:GO:0009535
            GO:GO:0015979 GO:GO:0009522 GO:GO:0016168 UniGene:At.24759
            TCDB:5.B.4.1.1 Gene3D:1.10.286.40 InterPro:IPR016370
            PIRSF:PIRSF002912 EMBL:AJ245866 EMBL:AY039848 EMBL:AY074826
            IPI:IPI00525222 PIR:B86428 RefSeq:NP_174327.1 UniGene:At.24377
            UniGene:At.67254 ProteinModelPortal:Q9SUI5 SMR:Q9SUI5 STRING:Q9SUI5
            PaxDb:Q9SUI5 PRIDE:Q9SUI5 EnsemblPlants:AT1G30380.1 GeneID:839918
            KEGG:ath:AT1G30380 TAIR:At1g30380 eggNOG:NOG238582
            HOGENOM:HOG000242129 InParanoid:Q9SUI5 KO:K02698 OMA:DTLACGA
            PhylomeDB:Q9SUI5 ProtClustDB:PLN03070 BioCyc:MetaCyc:MONOMER-1091
            Genevestigator:Q9SUI5 GermOnline:AT1G30380 InterPro:IPR017493
            TIGRFAMs:TIGR03050 Uniprot:Q9SUI5
        Length = 130

 Score = 431 (156.8 bits), Expect = 1.6e-40, P = 1.6e-40
 Identities = 87/109 (79%), Positives = 98/109 (89%)

Query:     1 MATSLMT-MPQFSGLRP-QISAAPAQSLVAAQPMRRKCSGALGARCGFIGSPTNLIMVTT 58
             MA+++MT +PQF+GLR  +ISAAP Q L + QPMRRK +GALGA+C FIGS TNLIMVT+
Sbjct:     1 MASTMMTTLPQFNGLRATKISAAPVQGLASVQPMRRKGNGALGAKCDFIGSSTNLIMVTS 60

Query:    59 TTLMLFAGRFGLAPSANRKATAGLKLEVRDSGLQTGDPAGFTLADTLAC 107
             TTLMLFAGRFGLAPSANRKATAGL+LE RDSGLQTGDPAGFTLADTLAC
Sbjct:    61 TTLMLFAGRFGLAPSANRKATAGLRLEARDSGLQTGDPAGFTLADTLAC 109


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.132   0.385    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      128       107   0.00091  102 3  11 22  0.39    30
                                                     29  0.40    32


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  449 (48 KB)
  Total size of DFA:  84 KB (2066 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  10.42u 0.12s 10.54t   Elapsed:  00:00:00
  Total cpu time:  10.42u 0.12s 10.54t   Elapsed:  00:00:00
  Start:  Fri May 10 13:05:28 2013   End:  Fri May 10 13:05:28 2013

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