Query 033068
Match_columns 128
No_of_seqs 142 out of 1313
Neff 6.8
Searched_HMMs 29240
Date Mon Mar 25 15:22:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033068.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/033068hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2kci_A Putative acyl carrier p 99.8 2.1E-19 7E-24 119.3 6.6 78 50-127 2-79 (87)
2 2dnw_A Acyl carrier protein; A 99.8 1.3E-18 4.6E-23 116.7 9.5 88 40-127 5-92 (99)
3 3gzm_A Acyl carrier protein; h 99.8 1E-18 3.6E-23 112.8 8.3 79 47-125 2-80 (81)
4 2kjs_A Putative acyl carrier p 99.8 1.3E-18 4.4E-23 115.2 8.1 76 52-127 4-79 (87)
5 2l4b_A Acyl carrier protein; i 99.8 1.2E-18 4E-23 114.2 7.5 83 45-127 3-88 (88)
6 2kwl_A ACP, acyl carrier prote 99.8 3.3E-18 1.1E-22 110.9 9.2 81 44-124 3-83 (84)
7 3ejb_A Acyl carrier protein; p 99.8 1.6E-18 5.6E-23 116.4 7.4 81 44-124 16-96 (97)
8 2lol_A ACP, acyl carrier prote 99.7 8E-18 2.7E-22 108.1 9.4 79 46-124 2-80 (81)
9 2cnr_A FAS, ACP, acyl carrier 99.7 1.3E-17 4.3E-22 107.1 10.1 80 45-124 2-81 (82)
10 1f80_D Acyl carrier protein; t 99.7 2E-18 6.9E-23 110.9 5.5 79 45-123 2-80 (81)
11 2ava_A ACP I, acyl carrier pro 99.7 9.6E-18 3.3E-22 108.1 8.4 80 47-127 1-81 (82)
12 4dxe_H ACP, acyl carrier prote 99.7 4.6E-18 1.6E-22 115.3 7.2 79 46-124 22-100 (101)
13 2qnw_A Acyl carrier protein; m 99.7 1E-17 3.5E-22 108.2 8.5 80 45-124 2-81 (82)
14 1x3o_A Acyl carrier protein; s 99.7 1.7E-17 5.9E-22 105.8 9.4 79 46-124 1-79 (80)
15 1vku_A Acyl carrier protein; T 99.7 1.2E-17 4.2E-22 113.1 8.6 82 45-127 12-93 (100)
16 2l9f_A CALE8, meacp; transfera 99.7 1.2E-17 4E-22 113.8 8.4 78 49-127 13-92 (102)
17 1klp_A ACP, ACPM, meromycolate 99.7 3.7E-17 1.3E-21 112.5 10.4 82 45-126 2-83 (115)
18 3ce7_A Specific mitochodrial a 99.7 2.3E-17 7.8E-22 112.9 9.2 80 46-126 15-99 (107)
19 1l0i_A Acyl carrier protein; a 99.7 3.3E-17 1.1E-21 104.5 8.0 75 50-124 3-77 (78)
20 1af8_A Actinorhodin polyketide 99.7 1.3E-17 4.4E-22 108.5 4.8 77 49-126 4-84 (86)
21 1dv5_A APO-DCP, APO-D-alanyl c 99.7 5.1E-17 1.7E-21 105.1 7.4 75 48-123 2-79 (80)
22 2cgq_A Acyl carrier protein AC 99.7 6E-17 2E-21 112.1 6.8 77 45-127 26-102 (113)
23 2kw2_A Specialized acyl carrie 99.7 8E-17 2.8E-21 108.7 6.8 77 50-126 3-90 (101)
24 2amw_A Hypothetical protein NE 99.7 2.5E-16 8.7E-21 102.0 7.9 75 51-125 3-82 (83)
25 2lki_A Putative uncharacterize 99.7 3.8E-16 1.3E-20 106.6 8.3 76 50-125 24-104 (105)
26 2lte_A Specialized acyl carrie 99.5 1.2E-17 4.1E-22 113.6 0.0 79 46-126 23-101 (103)
27 2ehs_A ACP, acyl carrier prote 99.6 6.9E-16 2.3E-20 97.5 8.2 75 51-125 2-76 (77)
28 2jq4_A AGR_C_4658P, hypothetic 99.6 3.8E-16 1.3E-20 106.3 7.0 82 44-126 16-101 (105)
29 1or5_A Acyl carrier protein; A 99.6 2E-16 6.8E-21 102.2 4.2 76 50-126 4-82 (83)
30 2l3v_A ACP, acyl carrier prote 99.6 5.8E-17 2E-21 103.4 0.8 76 49-124 3-78 (79)
31 1nq4_A Oxytetracycline polyket 99.6 1.6E-15 5.5E-20 101.2 6.9 73 52-125 6-82 (95)
32 2afd_A Protein ASL1650; twiste 99.6 1.1E-14 3.8E-19 93.9 9.6 81 43-124 7-87 (88)
33 1fh1_A NODF, nodulation protei 99.6 1.7E-16 5.8E-21 105.1 -0.8 78 49-127 3-91 (92)
34 2kr5_A PKS, aflatoxin biosynth 99.5 3.8E-14 1.3E-18 92.1 7.7 79 45-124 6-86 (89)
35 2liu_A CURA; holo state, trans 99.5 4.4E-14 1.5E-18 93.1 7.1 80 46-126 17-96 (99)
36 2ju1_A Erythronolide synthase; 99.5 6.1E-14 2.1E-18 92.1 6.3 78 46-124 16-94 (95)
37 2l22_A Mupirocin didomain acyl 99.4 4.3E-13 1.5E-17 100.1 7.4 82 43-125 19-100 (212)
38 2cg5_B Fatty acid synthase; tr 99.4 1.2E-12 4E-17 87.4 8.0 70 53-124 9-79 (91)
39 4i4d_A Peptide synthetase NRPS 99.4 1.9E-12 6.7E-17 85.4 8.7 77 47-126 13-89 (93)
40 2l22_A Mupirocin didomain acyl 99.3 4.2E-12 1.4E-16 94.7 9.4 80 46-126 126-205 (212)
41 1dny_A Non-ribosomal peptide s 99.3 4.2E-12 1.4E-16 83.7 8.3 75 46-123 10-84 (91)
42 2cq8_A 10-formyltetrahydrofola 99.0 1.6E-09 5.4E-14 74.5 6.8 75 47-124 22-98 (110)
43 3tej_A Enterobactin synthase c 98.9 4.1E-09 1.4E-13 82.2 8.3 76 46-124 7-82 (329)
44 2jgp_A Tyrocidine synthetase 3 98.6 1.2E-07 4.2E-12 77.4 8.3 75 46-123 6-80 (520)
45 2fq1_A Isochorismatase; ENTB, 98.5 1.3E-07 4.4E-12 73.5 6.4 66 53-121 218-283 (287)
46 2vsq_A Surfactin synthetase su 98.2 1.8E-06 6.1E-11 78.4 6.8 76 46-124 968-1043(1304)
47 4f6l_B AUSA reductase domain p 98.2 1.8E-07 6.2E-12 76.9 0.0 75 46-124 41-115 (508)
48 3rg2_A Enterobactin synthase c 98.2 1.9E-06 6.5E-11 72.3 6.0 71 51-124 546-616 (617)
49 4dg8_A PA1221; ANL superfamily 98.1 3.3E-07 1.1E-11 77.5 -1.1 75 47-124 521-596 (620)
50 2vz8_A Fatty acid synthase; tr 97.3 4.2E-05 1.4E-09 74.0 0.0 70 52-123 2125-2195(2512)
51 2px6_A Thioesterase domain; th 91.6 0.031 1.1E-06 42.4 -0.2 37 81-117 1-37 (316)
52 1v32_A AT5G08430, hypothetical 76.0 2.7 9.2E-05 27.7 3.4 69 32-100 16-92 (101)
53 1v31_A Hypothetical protein RA 75.9 0.86 2.9E-05 29.6 1.0 68 31-99 13-83 (93)
54 1dd4_C 50S ribosomal protein L 74.0 3.4 0.00012 22.8 3.0 21 81-101 12-32 (40)
55 1uhr_A SWI/SNF related, matrix 70.4 2.1 7.2E-05 27.7 1.8 66 33-99 15-83 (93)
56 3zen_D Fatty acid synthase; tr 69.4 0.96 3.3E-05 45.2 0.0 54 51-104 1795-1848(3089)
57 1zav_U 50S ribosomal protein L 60.5 7 0.00024 20.1 2.3 17 83-99 14-30 (30)
58 3ufe_A Transcriptional antiter 46.6 14 0.00049 23.2 2.7 21 87-107 79-99 (111)
59 3r9j_C MINE, cell division top 42.8 17 0.00059 22.7 2.5 35 38-72 18-52 (77)
60 1q1v_A DEK protein; winged-hel 40.6 44 0.0015 20.3 4.1 42 46-105 12-54 (70)
61 2pls_A CBS domain protein; APC 36.2 49 0.0017 20.2 3.9 34 91-124 19-53 (86)
62 1wyq_A Spectrin beta chain, br 35.4 97 0.0033 20.6 6.7 13 3-15 7-19 (127)
63 1bkr_A Spectrin beta chain; fi 35.1 90 0.0031 20.1 6.6 14 3-16 3-16 (109)
64 2bnk_A Early protein GP16.7; D 34.5 54 0.0018 19.6 3.6 31 93-123 14-49 (67)
65 2oai_A Hemolysin; PFAM03471, x 34.1 41 0.0014 21.0 3.4 34 91-124 28-61 (94)
66 3llb_A Uncharacterized protein 31.9 58 0.002 19.7 3.7 31 91-124 19-49 (83)
67 2kxo_A Cell division topologic 30.9 49 0.0017 21.3 3.3 29 43-71 35-63 (95)
68 3rio_A PTSGHI operon antitermi 30.2 33 0.0011 24.0 2.6 21 87-107 147-167 (180)
69 2rk5_A Putative hemolysin; str 29.8 59 0.002 19.8 3.5 29 91-122 18-46 (87)
70 2pag_A Hypothetical protein; n 29.2 31 0.0011 23.2 2.2 18 88-105 24-41 (135)
71 2p3h_A Uncharacterized CBS dom 28.4 63 0.0022 20.7 3.6 30 91-123 22-51 (101)
72 3ded_A Probable hemolysin; str 27.0 86 0.0029 20.3 4.1 34 91-124 45-80 (113)
73 1nha_A TFIIF-alpha, transcript 26.6 1.2E+02 0.0042 19.0 5.4 43 6-62 22-65 (82)
74 3lae_A UPF0053 protein HI0107; 26.4 54 0.0018 19.8 2.8 26 91-119 19-44 (81)
75 2pli_A Uncharacterized protein 25.8 78 0.0027 19.5 3.6 30 91-123 28-57 (91)
76 2r2z_A Hemolysin; APC85144, en 25.2 80 0.0027 19.4 3.5 30 91-123 26-55 (93)
77 2p13_A CBS domain; alpha-beta 23.6 96 0.0033 19.0 3.7 32 91-123 25-56 (90)
78 3m20_A 4-oxalocrotonate tautom 23.5 89 0.003 17.5 3.3 23 48-70 15-37 (62)
79 3fwu_A Macrophage migration in 23.1 13 0.00044 25.1 -0.7 60 10-70 57-116 (133)
80 2p4p_A Hypothetical protein HD 22.8 90 0.0031 18.9 3.4 30 91-122 19-49 (86)
81 2opa_A Probable tautomerase YW 22.5 81 0.0028 17.2 2.9 23 48-70 16-38 (61)
82 1otf_A 4-oxalocrotonate tautom 22.5 81 0.0028 17.2 2.9 23 48-70 16-38 (62)
83 3abf_A 4-oxalocrotonate tautom 21.2 76 0.0026 17.5 2.6 23 48-70 17-39 (64)
84 2hfk_A Pikromycin, type I poly 21.1 6.2 0.00021 29.5 -2.9 41 46-99 24-64 (319)
85 2eo2_A Adult MALE hypothalamus 20.7 1.3E+02 0.0044 18.4 3.6 38 28-71 25-69 (71)
86 2x4k_A 4-oxalocrotonate tautom 20.3 96 0.0033 16.7 2.9 23 48-70 19-41 (63)
No 1
>2kci_A Putative acyl carrier protein; alpha, ACP, PCP, structural genomics, unknown function, PSI- 2, protein structure initiative; NMR {Geobacter metallireducens gs-15} PDB: 2kjs_A* 2lml_A* 2kwm_A*
Probab=99.78 E-value=2.1e-19 Score=119.30 Aligned_cols=78 Identities=15% Similarity=0.273 Sum_probs=73.2
Q ss_pred HHHHHHHHHHHHhhCCCCCCCCCccCccccCCCChhHHHHHHHHHHHHhCCccChhhhccCCCHHHHHHHHHHhhCCC
Q 033068 50 EIMHRVIALVKKFDKTDAHKVTETADFQKDLSLDSLDRVELVMAFEEEFSVEIPEEKADKLTCCADVARYIASEAGEK 127 (128)
Q Consensus 50 ~i~~~l~~ii~~~l~i~~~~i~~d~~l~~dlGlDSL~~veli~~LEe~fgI~i~~~el~~~~Tv~dl~~~I~~~~~~~ 127 (128)
++.+++++++++.+++++++++++++|.+++|||||+++++++.||++|||+||++++.++.||+++++||.+++..|
T Consensus 2 ~i~ekv~~il~e~l~~d~~~i~~d~~l~~dlg~DSL~~veli~~lE~eF~I~i~~ed~~~~~Tv~dlv~~I~~~~~~~ 79 (87)
T 2kci_A 2 PTLDALTPIFRQVFDDDSIVLTRETSANDIDAWDSLSHMNLIVSLEVHYKIKFALGELQKLKNVGDLADLVDKKLARK 79 (87)
T ss_dssp CSHHHHHHHHHHHTTCSCCCCCTTCCSTTCCCCCSTHHHHHHHHHHHHHTCCCCHHHHTTCCSHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhCCCHHHCCCCCCcccccCCChHHHHHHHHHHHHHHCCccCHHHHHhCCCHHHHHHHHHHHHHHH
Confidence 367899999999999999999999999888999999999999999999999999999999999999999999877543
No 2
>2dnw_A Acyl carrier protein; ACP, fatty acid biosynthesis, mitochondria, NADH:ubiquinone oxidereductase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.77 E-value=1.3e-18 Score=116.66 Aligned_cols=88 Identities=39% Similarity=0.641 Sum_probs=81.7
Q ss_pred HhcCCCCChHHHHHHHHHHHHHhhCCCCCCCCCccCccccCCCChhHHHHHHHHHHHHhCCccChhhhccCCCHHHHHHH
Q 033068 40 MCASTSANPDEIMHRVIALVKKFDKTDAHKVTETADFQKDLSLDSLDRVELVMAFEEEFSVEIPEEKADKLTCCADVARY 119 (128)
Q Consensus 40 ~~~~~~~~~~~i~~~l~~ii~~~l~i~~~~i~~d~~l~~dlGlDSL~~veli~~LEe~fgI~i~~~el~~~~Tv~dl~~~ 119 (128)
++.-++++++++.++|++++++.+++++++++++++|..++|+|||++++++..||++||++||.+++..+.||++++++
T Consensus 5 ~~~m~~m~~~~i~~~l~~~l~~~l~~~~~~i~~d~~l~~dlG~DSL~~vel~~~le~~fgi~i~~~~l~~~~Tv~~l~~~ 84 (99)
T 2dnw_A 5 SSGMPPLTLEGIQDRVLYVLKLYDKIDPEKLSVNSHFMKDLGLDSLDQVEIIMAMEDEFGFEIPDIDAEKLMCPQEIVDY 84 (99)
T ss_dssp CCCCCCCCHHHHHHHHHHHHHHCTTSCTTTCCTTCCCCCCCCCCHHHHHHHHHHHHHHTTCCCCHHHHTTCCSHHHHHHH
T ss_pred ccCCCCCCHHHHHHHHHHHHHHHhCCCHhhCCCCCchhhhcCCCHHHHHHHHHHHHHHHCCCCCHHHHHhCCCHHHHHHH
Confidence 44456799999999999999999999999999999997799999999999999999999999999999999999999999
Q ss_pred HHHhhCCC
Q 033068 120 IASEAGEK 127 (128)
Q Consensus 120 I~~~~~~~ 127 (128)
|.+++.++
T Consensus 85 i~~~~~~~ 92 (99)
T 2dnw_A 85 IADKKDVY 92 (99)
T ss_dssp HHHHCCSC
T ss_pred HHHHhccc
Confidence 99987654
No 3
>3gzm_A Acyl carrier protein; helix bundle, phosphopantetheine, fatty acid biosynthesis, L synthesis, transit peptide, biosynthetic protein; HET: PNS; 1.80A {Plasmodium falciparum} SCOP: a.28.1.0 PDB: 3gzl_A* 2fq0_A* 2fq2_A*
Probab=99.77 E-value=1e-18 Score=112.80 Aligned_cols=79 Identities=32% Similarity=0.496 Sum_probs=74.9
Q ss_pred ChHHHHHHHHHHHHHhhCCCCCCCCCccCccccCCCChhHHHHHHHHHHHHhCCccChhhhccCCCHHHHHHHHHHhhC
Q 033068 47 NPDEIMHRVIALVKKFDKTDAHKVTETADFQKDLSLDSLDRVELVMAFEEEFSVEIPEEKADKLTCCADVARYIASEAG 125 (128)
Q Consensus 47 ~~~~i~~~l~~ii~~~l~i~~~~i~~d~~l~~dlGlDSL~~veli~~LEe~fgI~i~~~el~~~~Tv~dl~~~I~~~~~ 125 (128)
+++++.+++++++++.+++++++++++++|..++|||||++++++..||++||+++|++++..+.|++++++||.++++
T Consensus 2 ~~~~i~~~l~~ii~~~l~~~~~~i~~d~~l~~dlg~DSl~~vel~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~~~ 80 (81)
T 3gzm_A 2 SLKSTFDDIKKIISKQLSVEEDKIQMNSNFTKDLGADSLDLVELIMALEEKFNVTISDQDALKINTVQDAIDYIEKNNK 80 (81)
T ss_dssp CHHHHHHHHHHHHHHHHTCCGGGCCTTCBHHHHSCCCHHHHHHHHHHHHHHHTCCCCHHHHHTCCBHHHHHHHHHHHC-
T ss_pred CHHHHHHHHHHHHHHHhCcCHHHCCCCCcchhhcCCCHHHHHHHHHHHHHHHCCCcCHHHHHHcCCHHHHHHHHHHHhc
Confidence 5678999999999999999999999999997799999999999999999999999999999999999999999998875
No 4
>2kjs_A Putative acyl carrier protein; alpha, ACP, PNS, structural genomics, PSI-2, protein structure initiative; HET: PNS; NMR {Geobacter metallireducens gs-15} PDB: 2lml_A* 2kwm_A*
Probab=99.77 E-value=1.3e-18 Score=115.23 Aligned_cols=76 Identities=16% Similarity=0.285 Sum_probs=72.1
Q ss_pred HHHHHHHHHHhhCCCCCCCCCccCccccCCCChhHHHHHHHHHHHHhCCccChhhhccCCCHHHHHHHHHHhhCCC
Q 033068 52 MHRVIALVKKFDKTDAHKVTETADFQKDLSLDSLDRVELVMAFEEEFSVEIPEEKADKLTCCADVARYIASEAGEK 127 (128)
Q Consensus 52 ~~~l~~ii~~~l~i~~~~i~~d~~l~~dlGlDSL~~veli~~LEe~fgI~i~~~el~~~~Tv~dl~~~I~~~~~~~ 127 (128)
.++|.+++++.++++...|+++++|.+++|||||+.++++..||++|||+||.+++..++||+++++||.+++++|
T Consensus 4 le~l~~I~~e~l~~d~~~i~~~~~~~d~lg~DSL~~veli~~ie~~fgi~i~~~~l~~~~TV~dl~~~I~~kl~~k 79 (87)
T 2kjs_A 4 LDALTPIFRQVFDDDSIVLTRETSANDIDAWDSLSHMNLIVSLEVHYKIKFALGELQKLKNVGDLADLVDKKLARK 79 (87)
T ss_dssp HHHHHHHHHHHHTCSSCCCCTTCCSTTCSCCCHHHHHHHHHHHHHHHTCCCCHHHHTTCCSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCccccCCCCCcccCCCCChHHHHHHHHHHHHHhCceecHHHHHcCCCHHHHHHHHHHHHHHH
Confidence 5789999999999999999999999777999999999999999999999999999999999999999999988764
No 5
>2l4b_A Acyl carrier protein; infectious disease, human granulocytic anaplasmosis, ssgcid, structural genomics; NMR {Anaplasma phagocytophilum}
Probab=99.76 E-value=1.2e-18 Score=114.18 Aligned_cols=83 Identities=39% Similarity=0.576 Sum_probs=78.2
Q ss_pred CCChHHHHHHHHHHHHHhh---CCCCCCCCCccCccccCCCChhHHHHHHHHHHHHhCCccChhhhccCCCHHHHHHHHH
Q 033068 45 SANPDEIMHRVIALVKKFD---KTDAHKVTETADFQKDLSLDSLDRVELVMAFEEEFSVEIPEEKADKLTCCADVARYIA 121 (128)
Q Consensus 45 ~~~~~~i~~~l~~ii~~~l---~i~~~~i~~d~~l~~dlGlDSL~~veli~~LEe~fgI~i~~~el~~~~Tv~dl~~~I~ 121 (128)
.++++++.+++++++++.+ ++++++++++++|..++||||+++++++..||++||++||.+++..+.|++++++||.
T Consensus 3 ~m~~~~i~~~v~~~i~~~l~~~~~~~~~i~~d~~l~~dlglDSl~~vel~~~lE~~fgi~i~~~~~~~~~Tv~~l~~~i~ 82 (88)
T 2l4b_A 3 SMVSEEIKAQVMESVIGCLKLNDEQKQILSGTTNLAKDFNLDSLDFVDLIMSLEERFSLEISDEDAQKLETVDDICRYIA 82 (88)
T ss_dssp SSSCHHHHHHHHHHHHHHHTCCHHHHHSCCTTSCTTTTTTCCHHHHHHHHHHHHHHTTCCCCHHHHHTCCSHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhhCCCCHhhCCCCCchhhccCCcHHHHHHHHHHHHHHHCCCcCHHHHHHcCCHHHHHHHHH
Confidence 4788999999999999999 8888899999999889999999999999999999999999999999999999999999
Q ss_pred HhhCCC
Q 033068 122 SEAGEK 127 (128)
Q Consensus 122 ~~~~~~ 127 (128)
++++++
T Consensus 83 ~~~~~~ 88 (88)
T 2l4b_A 83 SKSSDA 88 (88)
T ss_dssp HHSSCC
T ss_pred HhhccC
Confidence 987653
No 6
>2kwl_A ACP, acyl carrier protein; structural genomics, seattle structura genomics center for infectious disease, ssgcid, lipid bindi protein; NMR {Borrelia burgdorferi}
Probab=99.76 E-value=3.3e-18 Score=110.90 Aligned_cols=81 Identities=31% Similarity=0.504 Sum_probs=77.6
Q ss_pred CCCChHHHHHHHHHHHHHhhCCCCCCCCCccCccccCCCChhHHHHHHHHHHHHhCCccChhhhccCCCHHHHHHHHHHh
Q 033068 44 TSANPDEIMHRVIALVKKFDKTDAHKVTETADFQKDLSLDSLDRVELVMAFEEEFSVEIPEEKADKLTCCADVARYIASE 123 (128)
Q Consensus 44 ~~~~~~~i~~~l~~ii~~~l~i~~~~i~~d~~l~~dlGlDSL~~veli~~LEe~fgI~i~~~el~~~~Tv~dl~~~I~~~ 123 (128)
++++++++.+++++++++.+++++++++++++|..++|+||+++++++..||++||+++|++++.++.|+++++++|.++
T Consensus 3 ~~m~~~~i~~~l~~~i~~~l~~~~~~i~~~~~l~~dlG~DSl~~vel~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~ 82 (84)
T 2kwl_A 3 GSMDNDEIFSKVRSIISEQLDKKEDEITTDSRFVEDLNADSLDIYELLYLLEEAFDDKIPENEANEFETVGDVVNFIKKR 82 (84)
T ss_dssp CCSTHHHHHHHHHHHHHHHHCCCGGGCCTTTHHHHTSSSCHHHHHHHHHHHHHHHTCCTTTTGGGGCSSHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHhCCCcccCCCCCchhhhcCCCHHHHHHHHHHHHHHHCCCcCHHHHHHCCCHHHHHHHHHHH
Confidence 45899999999999999999999999999999988999999999999999999999999999999999999999999987
Q ss_pred h
Q 033068 124 A 124 (128)
Q Consensus 124 ~ 124 (128)
+
T Consensus 83 ~ 83 (84)
T 2kwl_A 83 K 83 (84)
T ss_dssp H
T ss_pred c
Confidence 5
No 7
>3ejb_A Acyl carrier protein; protein-protein complex, cytochrome P450 fold, carrier protein, 4-helix bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Escherichia coli} SCOP: a.28.1.1 PDB: 3ejd_A* 3eje_A*
Probab=99.76 E-value=1.6e-18 Score=116.44 Aligned_cols=81 Identities=40% Similarity=0.563 Sum_probs=75.5
Q ss_pred CCCChHHHHHHHHHHHHHhhCCCCCCCCCccCccccCCCChhHHHHHHHHHHHHhCCccChhhhccCCCHHHHHHHHHHh
Q 033068 44 TSANPDEIMHRVIALVKKFDKTDAHKVTETADFQKDLSLDSLDRVELVMAFEEEFSVEIPEEKADKLTCCADVARYIASE 123 (128)
Q Consensus 44 ~~~~~~~i~~~l~~ii~~~l~i~~~~i~~d~~l~~dlGlDSL~~veli~~LEe~fgI~i~~~el~~~~Tv~dl~~~I~~~ 123 (128)
.+.+++++.++|++++++.+++++++++++++|..++|+|||+.++++..||++|||+||++++..+.||+++++||.++
T Consensus 16 ~~~t~~~i~~~l~~iia~~l~~~~~~i~~d~~l~~dLGlDSL~~vel~~~lE~~fgi~i~~~~l~~~~Tv~~l~~~i~~~ 95 (97)
T 3ejb_A 16 RGSHMSTIEERVKKIIGEQLGVKQEEVTNNASFVEDLGADSLDTVELVMALEEEFDTEIPDEEAEKITTVQAAIDYINGH 95 (97)
T ss_dssp --CCCCCHHHHHHHHHHHHSCCCTTTSCTTCBTTTTTCCCTTHHHHHHHHHHHHTTCCCCHHHHHHCCBHHHHHHHHHHC
T ss_pred CCCCHHHHHHHHHHHHHHHHCcCHHHCCCCCCchhhcCCCHHHHHHHHHHHHHHHCCCCCHHHHHhCCCHHHHHHHHHHh
Confidence 44788899999999999999999999999999977999999999999999999999999999999999999999999876
Q ss_pred h
Q 033068 124 A 124 (128)
Q Consensus 124 ~ 124 (128)
+
T Consensus 96 ~ 96 (97)
T 3ejb_A 96 Q 96 (97)
T ss_dssp -
T ss_pred c
Confidence 4
No 8
>2lol_A ACP, acyl carrier protein; lipid transport; NMR {Rickettsia prowazekii str}
Probab=99.75 E-value=8e-18 Score=108.09 Aligned_cols=79 Identities=37% Similarity=0.610 Sum_probs=75.1
Q ss_pred CChHHHHHHHHHHHHHhhCCCCCCCCCccCccccCCCChhHHHHHHHHHHHHhCCccChhhhccCCCHHHHHHHHHHhh
Q 033068 46 ANPDEIMHRVIALVKKFDKTDAHKVTETADFQKDLSLDSLDRVELVMAFEEEFSVEIPEEKADKLTCCADVARYIASEA 124 (128)
Q Consensus 46 ~~~~~i~~~l~~ii~~~l~i~~~~i~~d~~l~~dlGlDSL~~veli~~LEe~fgI~i~~~el~~~~Tv~dl~~~I~~~~ 124 (128)
++++++.+++++++++.+++++++++++++|..++|+||+++++++..||++||+++|.+++..+.|+++++++|.+++
T Consensus 2 m~~~~i~~~l~~ii~~~l~~~~~~i~~~~~l~~dlG~DSl~~~el~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~~ 80 (81)
T 2lol_A 2 STTDKIEQKVIEMVAEKLNKDKAIITTDSRFIEDLKADSLDTVELMMAIEVEYGIDIPDDEATKIKTVSDVIKYIKERQ 80 (81)
T ss_dssp CSHHHHHHHHHHHHHHHSCCCTTTCCTTCCHHHHTTCCHHHHHHHHHHHHHHHCCCCCGGGGGGSSSHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHHHHHCCChhhCCCCCcHHHhcCCcHHHHHHHHHHHHHHHCCCCCHHHHHHcCCHHHHHHHHHHhc
Confidence 4678999999999999999999999999999679999999999999999999999999999999999999999998875
No 9
>2cnr_A FAS, ACP, acyl carrier protein; polykdetide, phosphopantetheine, lipid transport; NMR {Streptomyces coelicolor} PDB: 2koo_A* 2kop_A* 2koq_A* 2kor_A* 2kos_A*
Probab=99.75 E-value=1.3e-17 Score=107.11 Aligned_cols=80 Identities=31% Similarity=0.532 Sum_probs=76.2
Q ss_pred CCChHHHHHHHHHHHHHhhCCCCCCCCCccCccccCCCChhHHHHHHHHHHHHhCCccChhhhccCCCHHHHHHHHHHhh
Q 033068 45 SANPDEIMHRVIALVKKFDKTDAHKVTETADFQKDLSLDSLDRVELVMAFEEEFSVEIPEEKADKLTCCADVARYIASEA 124 (128)
Q Consensus 45 ~~~~~~i~~~l~~ii~~~l~i~~~~i~~d~~l~~dlGlDSL~~veli~~LEe~fgI~i~~~el~~~~Tv~dl~~~I~~~~ 124 (128)
+++++++.+++.+++++.+++++++++++++|..++|+||+++++++..||++||+++|.+++..+.|+++++++|.+++
T Consensus 2 ~m~~~~i~~~l~~~i~~~l~~~~~~i~~~~~l~~dlG~DSl~~~~l~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~~ 81 (82)
T 2cnr_A 2 AATQEEIVAGLAEIVNEIAGIPVEDVKLDKSFTDDLDVDSLSMVEVVVAAEERFDVKIPDDDVKNLKTVGDATKYILDHQ 81 (82)
T ss_dssp CCCHHHHHHHHHHHHHHHSCCCTTTCCTTSBTTTTSCCCHHHHHHHHHHHHGGGTBCCCGGGGGTCSBHHHHHHHHHHSB
T ss_pred CCCHHHHHHHHHHHHHHHhCCCHHHCCCCcchhhccCCChHHHHHHHHHHHHHhCCCCCHHHHHHcCCHHHHHHHHHHHc
Confidence 47889999999999999999999999999999779999999999999999999999999999999999999999998765
No 10
>1f80_D Acyl carrier protein; transferase; HET: PN2; 2.30A {Bacillus subtilis} SCOP: a.28.1.1 PDB: 2x2b_A* 1hy8_A
Probab=99.74 E-value=2e-18 Score=110.91 Aligned_cols=79 Identities=34% Similarity=0.556 Sum_probs=72.1
Q ss_pred CCChHHHHHHHHHHHHHhhCCCCCCCCCccCccccCCCChhHHHHHHHHHHHHhCCccChhhhccCCCHHHHHHHHHHh
Q 033068 45 SANPDEIMHRVIALVKKFDKTDAHKVTETADFQKDLSLDSLDRVELVMAFEEEFSVEIPEEKADKLTCCADVARYIASE 123 (128)
Q Consensus 45 ~~~~~~i~~~l~~ii~~~l~i~~~~i~~d~~l~~dlGlDSL~~veli~~LEe~fgI~i~~~el~~~~Tv~dl~~~I~~~ 123 (128)
+++++++.+++++++++.+++++++++++++|..++|+||+++++++..||++||+++|.+++.++.|+++++++|.++
T Consensus 2 ~m~~~~i~~~l~~~l~~~l~~~~~~i~~~~~l~~dlG~DSl~~vel~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~ 80 (81)
T 1f80_D 2 PLGSADTLERVTKIIVDRLGVDEADVKLEASFKEDLGADXLDVVELVMELEDEFDMEISDEDAEKIATVGDAVNYIQNQ 80 (81)
T ss_dssp ---CCHHHHHHHHHHHHHSSCCSSCCCTTCBHHHHSCCCHHHHHHHHHHHHHHTTCCCCHHHHHHCCBHHHHHHHCC--
T ss_pred CCCHHHHHHHHHHHHHHHHCCCHHhCCCccchHHHcCCcHHHHHHHHHHHHHHhCCccCHHHHHHCCCHHHHHHHHHhh
Confidence 5788899999999999999999999999999988999999999999999999999999999999999999999998765
No 11
>2ava_A ACP I, acyl carrier protein I, chloroplast; four-helix-bundle, biosynthetic protein; NMR {Spinacia oleracea} PDB: 2fva_A* 2fve_A 2fvf_A* 2xz0_D* 2xz1_C*
Probab=99.74 E-value=9.6e-18 Score=108.09 Aligned_cols=80 Identities=34% Similarity=0.475 Sum_probs=74.7
Q ss_pred ChHHHHHHHHHHHHHhhCCCCC-CCCCccCccccCCCChhHHHHHHHHHHHHhCCccChhhhccCCCHHHHHHHHHHhhC
Q 033068 47 NPDEIMHRVIALVKKFDKTDAH-KVTETADFQKDLSLDSLDRVELVMAFEEEFSVEIPEEKADKLTCCADVARYIASEAG 125 (128)
Q Consensus 47 ~~~~i~~~l~~ii~~~l~i~~~-~i~~d~~l~~dlGlDSL~~veli~~LEe~fgI~i~~~el~~~~Tv~dl~~~I~~~~~ 125 (128)
+++++.+++++++++.++++++ +++++++| .++|+|||++++++..||++||+++|++++..+.|+++++++|.++++
T Consensus 1 ~~~~i~~~l~~i~~~~l~~~~~~~i~~~~~l-~dlG~DSl~~vel~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~~~ 79 (82)
T 2ava_A 1 AKKETIDKVSDIVKEKLALGADVVVTADSEF-SKLGADSLDTVEIVMNLEEEFGINVDEDKAQDISTIQQAADVIEGLLE 79 (82)
T ss_dssp CCHHHHHHHHHHHHHHTTCSSSSCCCSSCCS-CCCTTCCSCHHHHHHHHHHHTTCCCCGGGSSSCCSHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHhCCCcccccCCCCch-hhcCCCHHHHHHHHHHHHHHHCCccCHHHHHhCCCHHHHHHHHHHHHh
Confidence 4578999999999999999887 89999999 699999999999999999999999999999999999999999998876
Q ss_pred CC
Q 033068 126 EK 127 (128)
Q Consensus 126 ~~ 127 (128)
++
T Consensus 80 ~~ 81 (82)
T 2ava_A 80 KK 81 (82)
T ss_dssp HC
T ss_pred cC
Confidence 54
No 12
>4dxe_H ACP, acyl carrier protein; acyl-carrier-protein synthase, type II acid synthesis pathway; 2.51A {Staphylococcus aureus}
Probab=99.74 E-value=4.6e-18 Score=115.33 Aligned_cols=79 Identities=42% Similarity=0.604 Sum_probs=71.6
Q ss_pred CChHHHHHHHHHHHHHhhCCCCCCCCCccCccccCCCChhHHHHHHHHHHHHhCCccChhhhccCCCHHHHHHHHHHhh
Q 033068 46 ANPDEIMHRVIALVKKFDKTDAHKVTETADFQKDLSLDSLDRVELVMAFEEEFSVEIPEEKADKLTCCADVARYIASEA 124 (128)
Q Consensus 46 ~~~~~i~~~l~~ii~~~l~i~~~~i~~d~~l~~dlGlDSL~~veli~~LEe~fgI~i~~~el~~~~Tv~dl~~~I~~~~ 124 (128)
+++.++.++|++++++.+++++++++++++|..++|||||+.++|+..||++|||+||++++..+.||+++++||.++.
T Consensus 22 m~~mei~~~l~~iiae~l~~~~~~I~~d~~l~~dLGlDSL~~veLi~~lE~~fgi~i~~~~l~~~~Tv~dl~~~I~~~~ 100 (101)
T 4dxe_H 22 SNAMENFDKVKDIIVDRLGVDADKVTEDASFKDDLGADSLDIAELVMELEDEFGTEIPDEEAEKINTVGDAVKFINSLE 100 (101)
T ss_dssp --CTTHHHHHHHHHHHTTCCCGGGCCTTCBTTTTSCCCHHHHHHHHHHHHHHTTCCCCHHHHTTCCBHHHHHHHHC---
T ss_pred cCHHHHHHHHHHHHHHHHCcChhhCCCCCcchhhcCCCcHHHHHHHHHHHHHHCCCCCHHHHHcCCCHHHHHHHHHHcc
Confidence 3445799999999999999999999999999999999999999999999999999999999999999999999998764
No 13
>2qnw_A Acyl carrier protein; malaria, SGC, structural genomics CONS fatty acid biosynthesis, lipid synthesis, phosphopantethein transit peptide; 1.90A {Toxoplasma gondii}
Probab=99.73 E-value=1e-17 Score=108.19 Aligned_cols=80 Identities=40% Similarity=0.615 Sum_probs=75.2
Q ss_pred CCChHHHHHHHHHHHHHhhCCCCCCCCCccCccccCCCChhHHHHHHHHHHHHhCCccChhhhccCCCHHHHHHHHHHhh
Q 033068 45 SANPDEIMHRVIALVKKFDKTDAHKVTETADFQKDLSLDSLDRVELVMAFEEEFSVEIPEEKADKLTCCADVARYIASEA 124 (128)
Q Consensus 45 ~~~~~~i~~~l~~ii~~~l~i~~~~i~~d~~l~~dlGlDSL~~veli~~LEe~fgI~i~~~el~~~~Tv~dl~~~I~~~~ 124 (128)
+.+++++.+++++++++.+++++++++++++|..++|+|||++++++..||++||+++|++++..+.|+++++++|.++.
T Consensus 2 ~~~~~~i~~~l~~ii~~~l~~~~~~i~~d~~l~~dlG~DSl~~vel~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~~ 81 (82)
T 2qnw_A 2 SSDDRPLLERVKDVVADQLGVDRARINPESNFIKDLDADSLDSVELVMAFEEKFGVSIPDEEASKIATVQDALSYIEKAK 81 (82)
T ss_dssp -CCSHHHHHHHHHHHHHHHCCCGGGCCTTCBHHHHSCCCHHHHHHHHHHHHHHHTCCCCHHHHTTCCBHHHHHHHHHHHT
T ss_pred CCcHHHHHHHHHHHHHHHHCCCHhhCCCccchhhccCCcHHHHHHHHHHHHHHHCCcCCHHHHHHcCCHHHHHHHHHHhc
Confidence 35678899999999999999999999999999779999999999999999999999999999999999999999998874
No 14
>1x3o_A Acyl carrier protein; structural genomics, riken structural genomics/proteomics in RSGI, NPPSFA; 1.50A {Thermus thermophilus}
Probab=99.73 E-value=1.7e-17 Score=105.84 Aligned_cols=79 Identities=38% Similarity=0.591 Sum_probs=75.6
Q ss_pred CChHHHHHHHHHHHHHhhCCCCCCCCCccCccccCCCChhHHHHHHHHHHHHhCCccChhhhccCCCHHHHHHHHHHhh
Q 033068 46 ANPDEIMHRVIALVKKFDKTDAHKVTETADFQKDLSLDSLDRVELVMAFEEEFSVEIPEEKADKLTCCADVARYIASEA 124 (128)
Q Consensus 46 ~~~~~i~~~l~~ii~~~l~i~~~~i~~d~~l~~dlGlDSL~~veli~~LEe~fgI~i~~~el~~~~Tv~dl~~~I~~~~ 124 (128)
|+++++.+++.+++++.+++++++++++++|..++|+||+++++++..||++||+++|.+++..+.|+++++++|.+++
T Consensus 1 M~~~~i~~~l~~~i~~~l~~~~~~i~~~~~l~~~lG~DSl~~~~l~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~~ 79 (80)
T 1x3o_A 1 MTEQEIFEKVKAVIADKLQVEPEKVTLEARFIEDLGADSLDTVELIMGLEDEFGLEISDEEAEKIRTVKDAVEYIKAKL 79 (80)
T ss_dssp CCHHHHHHHHHHHHHHHHTCCGGGCCTTCBTTTTTCCCHHHHHHHHHHHHHHHCCCCCHHHHHHCCBHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHhCCCHHHCCCcCcHHhhcCccHHHHHHHHHHHHHHHCCCcCHHHHHHcCCHHHHHHHHHHHc
Confidence 5778999999999999999999999999999899999999999999999999999999999999999999999998875
No 15
>1vku_A Acyl carrier protein; TM0175, structural genomics, JCSG, Pro structure initiative, PSI; 2.00A {Thermotoga maritima} SCOP: a.28.1.1
Probab=99.73 E-value=1.2e-17 Score=113.07 Aligned_cols=82 Identities=26% Similarity=0.464 Sum_probs=77.4
Q ss_pred CCChHHHHHHHHHHHHHhhCCCCCCCCCccCccccCCCChhHHHHHHHHHHHHhCCccChhhhccCCCHHHHHHHHHHhh
Q 033068 45 SANPDEIMHRVIALVKKFDKTDAHKVTETADFQKDLSLDSLDRVELVMAFEEEFSVEIPEEKADKLTCCADVARYIASEA 124 (128)
Q Consensus 45 ~~~~~~i~~~l~~ii~~~l~i~~~~i~~d~~l~~dlGlDSL~~veli~~LEe~fgI~i~~~el~~~~Tv~dl~~~I~~~~ 124 (128)
.+.+.++.++|++++++.+++++++++++++| .++|||||+.++|+..||++||++||++++..+.||+++++||.+++
T Consensus 12 ~~~~~~i~~~l~~ila~~l~v~~~~I~~d~~L-~dLGlDSL~~veL~~~LE~~fgi~i~~~~l~~~~TV~~L~~~I~~~~ 90 (100)
T 1vku_A 12 HMERKKLIAKFVEIASEKMGKDLETVDEENTF-KELGFDSIDVIDLVMFFEDEFALRIEDEEISKIRKVKDLIDIVIKKL 90 (100)
T ss_dssp TTHHHHHHHHHHHHHHHTTCCCCCSCCTTSBT-TTTTCCHHHHHHHHHHHHHHHTCCCCHHHHTTCCBHHHHHHHHHHHH
T ss_pred hccHHHHHHHHHHHHHHHHCCCHHHCCCCCCH-HHcCCchHHHHHHHHHHHHHHCCCCCHHHHHcCCCHHHHHHHHHHHh
Confidence 36778999999999999999999999999999 99999999999999999999999999999999999999999999887
Q ss_pred CCC
Q 033068 125 GEK 127 (128)
Q Consensus 125 ~~~ 127 (128)
+++
T Consensus 91 ~~~ 93 (100)
T 1vku_A 91 EEI 93 (100)
T ss_dssp HHC
T ss_pred hhh
Confidence 543
No 16
>2l9f_A CALE8, meacp; transferase, acyl carrier protein; NMR {Micromonospora echinospora}
Probab=99.73 E-value=1.2e-17 Score=113.77 Aligned_cols=78 Identities=14% Similarity=0.187 Sum_probs=72.6
Q ss_pred HHHHHHHHHHHHHhhCCCCCCCCCccCccccCCCChhHHHHHHHHHHHHhCCccChhhhccC--CCHHHHHHHHHHhhCC
Q 033068 49 DEIMHRVIALVKKFDKTDAHKVTETADFQKDLSLDSLDRVELVMAFEEEFSVEIPEEKADKL--TCCADVARYIASEAGE 126 (128)
Q Consensus 49 ~~i~~~l~~ii~~~l~i~~~~i~~d~~l~~dlGlDSL~~veli~~LEe~fgI~i~~~el~~~--~Tv~dl~~~I~~~~~~ 126 (128)
.+|.+++++++++.++++++.++|+++|.+|||+|||+.++|++.+|++||+++|.+ ..++ .||+++++||.++.+.
T Consensus 13 ~~I~~~V~~ilaE~lev~~e~Vtpda~l~dDLglDSLd~VeLVm~lE~~fGi~ipd~-~e~~~~~TV~d~vdyI~~~~~~ 91 (102)
T 2l9f_A 13 TGALELVRHLVAERAELPVEVLRDDSRFLDDLHMSSITVGQLVNEAARAMGLSAVAM-PTNFATATVREMAEALEARERE 91 (102)
T ss_dssp CCHHHHHHHHHHHHTTSCSSSCCTTCBTTTTSCCCHHHHHHHHHHHHHHHTCSTTSS-CSCCTTCBHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHCCCHHHcCCCcchhhhcCCcHHHHHHHHHHHHHHhCCCCCcc-HHHHHHccHHHHHHHHHHhhcc
Confidence 468999999999999999999999999999999999999999999999999999877 6667 9999999999998765
Q ss_pred C
Q 033068 127 K 127 (128)
Q Consensus 127 ~ 127 (128)
+
T Consensus 92 ~ 92 (102)
T 2l9f_A 92 A 92 (102)
T ss_dssp C
T ss_pred c
Confidence 3
No 17
>1klp_A ACP, ACPM, meromycolate extension acyl carrier protein; four-helix bundle, ligand transport; NMR {Mycobacterium tuberculosis} SCOP: a.28.1.1
Probab=99.72 E-value=3.7e-17 Score=112.47 Aligned_cols=82 Identities=27% Similarity=0.502 Sum_probs=78.2
Q ss_pred CCChHHHHHHHHHHHHHhhCCCCCCCCCccCccccCCCChhHHHHHHHHHHHHhCCccChhhhccCCCHHHHHHHHHHhh
Q 033068 45 SANPDEIMHRVIALVKKFDKTDAHKVTETADFQKDLSLDSLDRVELVMAFEEEFSVEIPEEKADKLTCCADVARYIASEA 124 (128)
Q Consensus 45 ~~~~~~i~~~l~~ii~~~l~i~~~~i~~d~~l~~dlGlDSL~~veli~~LEe~fgI~i~~~el~~~~Tv~dl~~~I~~~~ 124 (128)
+++++++.++|++++++.+++++++++++++|..++|+|||++++++..||++||++||.+++..+.||++++++|.++.
T Consensus 2 ~m~~~~i~~~l~~il~~~l~~~~~~i~~d~~l~~dlG~DSL~~vel~~~lE~~fgi~i~~~~l~~~~Tv~~l~~~i~~~~ 81 (115)
T 1klp_A 2 PVTQEEIIAGIAEIIEEVTGIEPSEITPEKSFVDDLDIDSLSMVEIAVQTEDKYGVKIPDEDLAGLRTVGDVVAYIQKLE 81 (115)
T ss_dssp CCCHHHHHHHHHHHHHHHTCCCTTTCCTTCCTTTTTCSHHHHHHHHHHHHHHHTCCCCCHHHHTTCCSHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHhCcCHHhCCCCCchhhccCCCHHHHHHHHHHHHHHHCCCCCHHHHHcCCCHHHHHHHHHHHH
Confidence 57889999999999999999999999999999779999999999999999999999999999999999999999999887
Q ss_pred CC
Q 033068 125 GE 126 (128)
Q Consensus 125 ~~ 126 (128)
..
T Consensus 82 ~~ 83 (115)
T 1klp_A 82 EE 83 (115)
T ss_dssp SS
T ss_pred cc
Confidence 64
No 18
>3ce7_A Specific mitochodrial acyl carrier protein; malaria, mitochondrial, ACP, fatty acid biosynthesis, lipid synthesis, phosphopantetheine; 1.64A {Toxoplasma}
Probab=99.72 E-value=2.3e-17 Score=112.89 Aligned_cols=80 Identities=29% Similarity=0.544 Sum_probs=76.1
Q ss_pred CChHHHHHHHHHHHHHhhCCCCCCCCCccCcc-----ccCCCChhHHHHHHHHHHHHhCCccChhhhccCCCHHHHHHHH
Q 033068 46 ANPDEIMHRVIALVKKFDKTDAHKVTETADFQ-----KDLSLDSLDRVELVMAFEEEFSVEIPEEKADKLTCCADVARYI 120 (128)
Q Consensus 46 ~~~~~i~~~l~~ii~~~l~i~~~~i~~d~~l~-----~dlGlDSL~~veli~~LEe~fgI~i~~~el~~~~Tv~dl~~~I 120 (128)
++.+++.++|++++++.++ ++++++++++|. .+||||||++++|+..||++|||+||++++..+.||+++++||
T Consensus 15 ~~~~~i~~~i~~il~e~l~-~~~~i~~d~~l~~~~~~~dLglDSL~~veli~~lE~~fgi~i~~~~~~~~~Tv~~l~~~i 93 (107)
T 3ce7_A 15 TDINAVTNYIVGMCQKFLQ-KGEKVTPSSKLEELRTREDRLWDCLDTVEFVLDVEEIFDVTVPDEVADNFQTLQEIADFV 93 (107)
T ss_dssp TCHHHHHHHHHHHHHTTBC-TTCCCCTTSCGGGSBBTTSSBCCHHHHHHHHHHHHHHHTCCCCHHHHTTCCSHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHhC-CccccCCCCcccccCcccccCCCHHHHHHHHHHHHHHHCCCCCHHHHHhcCCHHHHHHHH
Confidence 6789999999999999999 899999999997 7999999999999999999999999999999999999999999
Q ss_pred HHhhCC
Q 033068 121 ASEAGE 126 (128)
Q Consensus 121 ~~~~~~ 126 (128)
.++..+
T Consensus 94 ~~~~~~ 99 (107)
T 3ce7_A 94 VSERAK 99 (107)
T ss_dssp HHHHHS
T ss_pred HHHHHH
Confidence 988754
No 19
>1l0i_A Acyl carrier protein; acyl chain binding, fatty acid biosynt lipid transport; HET: PSR; 1.20A {Escherichia coli} SCOP: a.28.1.1 PDB: 3ny7_B* 2fhs_C 1l0h_A* 1acp_A 1t8k_A 2fac_A* 2fad_A* 2fae_A* 2k92_A 2k93_A 2k94_A 2l0q_A
Probab=99.71 E-value=3.3e-17 Score=104.50 Aligned_cols=75 Identities=43% Similarity=0.605 Sum_probs=71.4
Q ss_pred HHHHHHHHHHHHhhCCCCCCCCCccCccccCCCChhHHHHHHHHHHHHhCCccChhhhccCCCHHHHHHHHHHhh
Q 033068 50 EIMHRVIALVKKFDKTDAHKVTETADFQKDLSLDSLDRVELVMAFEEEFSVEIPEEKADKLTCCADVARYIASEA 124 (128)
Q Consensus 50 ~i~~~l~~ii~~~l~i~~~~i~~d~~l~~dlGlDSL~~veli~~LEe~fgI~i~~~el~~~~Tv~dl~~~I~~~~ 124 (128)
++.+++++++++.+++++++++++++|..++|+||+++++++..||++||+++|++++..+.|+++++++|.++.
T Consensus 3 ~i~~~l~~~~~~~l~~~~~~i~~~~~l~~dlG~DSl~~~el~~~le~~fgi~i~~~~l~~~~Tv~~l~~~i~~~~ 77 (78)
T 1l0i_A 3 TIEERVKKIIGEQLGVKQEEVTNNASFVEDLGADSLDTVELVMALEEEFDTEIPDEEAEKMTTVQAAIDYINGHQ 77 (78)
T ss_dssp CHHHHHHHHHHHHHTCCGGGCCTTCBTTTTSCCCHHHHHHHHHHHHHHHTCCCCHHHHTTCCBHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHhCCCHHHCCCCcchhhhcCCCHHHHHHHHHHHHHHhCCCCCHHHHHHcCCHHHHHHHHHHhc
Confidence 578999999999999999999999999669999999999999999999999999999999999999999998765
No 20
>1af8_A Actinorhodin polyketide synthase acyl carrier Pro; acyl carrier protein, solution STR antibiotic biosynthesis; NMR {Streptomyces coelicolor} SCOP: a.28.1.1 PDB: 2af8_A 2k0x_A* 2k0y_A 2kg6_A* 2kg8_A* 2kg9_A* 2kga_A* 2kgc_A* 2kgd_A* 2kge_A*
Probab=99.70 E-value=1.3e-17 Score=108.50 Aligned_cols=77 Identities=17% Similarity=0.206 Sum_probs=71.3
Q ss_pred HHHHHHHHHHHHHhhCCCCC----CCCCccCccccCCCChhHHHHHHHHHHHHhCCccChhhhccCCCHHHHHHHHHHhh
Q 033068 49 DEIMHRVIALVKKFDKTDAH----KVTETADFQKDLSLDSLDRVELVMAFEEEFSVEIPEEKADKLTCCADVARYIASEA 124 (128)
Q Consensus 49 ~~i~~~l~~ii~~~l~i~~~----~i~~d~~l~~dlGlDSL~~veli~~LEe~fgI~i~~~el~~~~Tv~dl~~~I~~~~ 124 (128)
+.+.+++++++++.++++++ +++++++| .++|+|||++++++..||++||+++|++++..+.|++++++||.++.
T Consensus 4 ~~~~~~l~~il~~~l~~~~~~~~~~i~~~~~l-~dlG~DSL~~vel~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~~ 82 (86)
T 1af8_A 4 LLTTDDLRRALVECAGETDGTDLSGDFLDLRF-EDIGYDSLALMETAARLESRYGVSIPDDVAGRVDTPRELLDLINGAL 82 (86)
T ss_dssp SSCHHHHHHHHHTTCCCCSCCCTTTCSSTTST-TTTTCCTTTHHHHHHHHTTTTCSCCCTTTTTTCCSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCcccccccCCCCCCh-hhcCCCHHHHHHHHHHHHHHHCCCcCHHHHHcCCCHHHHHHHHHHHh
Confidence 44678899999999999876 78999999 99999999999999999999999999999999999999999999887
Q ss_pred CC
Q 033068 125 GE 126 (128)
Q Consensus 125 ~~ 126 (128)
++
T Consensus 83 ~~ 84 (86)
T 1af8_A 83 AE 84 (86)
T ss_dssp HH
T ss_pred hc
Confidence 54
No 21
>1dv5_A APO-DCP, APO-D-alanyl carrier protein; 3-helix bundle, transport protein; NMR {Lactobacillus casei} SCOP: a.28.1.3 PDB: 1hqb_A
Probab=99.69 E-value=5.1e-17 Score=105.11 Aligned_cols=75 Identities=17% Similarity=0.339 Sum_probs=69.4
Q ss_pred hHHHHHHHHHHHHHhhCCCCCCCCCccCccccCC-CChhHHHHHHHHHHHHhCCccChhhhc--cCCCHHHHHHHHHHh
Q 033068 48 PDEIMHRVIALVKKFDKTDAHKVTETADFQKDLS-LDSLDRVELVMAFEEEFSVEIPEEKAD--KLTCCADVARYIASE 123 (128)
Q Consensus 48 ~~~i~~~l~~ii~~~l~i~~~~i~~d~~l~~dlG-lDSL~~veli~~LEe~fgI~i~~~el~--~~~Tv~dl~~~I~~~ 123 (128)
.+++.+++++++++.++.++.+++++++| .++| +||+++++++..||++|||+||++++. ++.||+++++||.++
T Consensus 2 ~~~i~~~i~~il~~~~~~~~~~i~~d~~l-~~~g~lDSl~~velv~~lE~~fgi~i~~~~~~~~~~~Tv~~l~~~i~~~ 79 (80)
T 1dv5_A 2 DEAIKNGVLDILADLTGSDDVKKNLDLNL-FETGLLDSMGTVQLLLELQSQFGVDAPVSEFDRKEWDTPNKIIAKVEQA 79 (80)
T ss_dssp CHHHHHHHHHHHHHHHTSSSTTTCSSCCS-STTSSCCSHHHHHHHHHHTTTSCCCCCCSSCCTTTTTSHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHhCCCcccCCCCcch-hhccCcChHHHHHHHHHHHHHhCCcCCHHHcCHHhcCCHHHHHHHHHHc
Confidence 46799999999999999988889999999 5666 999999999999999999999999986 999999999999875
No 22
>2cgq_A Acyl carrier protein ACPA; RV0033, protein transport, phosphopant; 1.83A {Mycobacterium tuberculosis}
Probab=99.68 E-value=6e-17 Score=112.12 Aligned_cols=77 Identities=22% Similarity=0.317 Sum_probs=70.2
Q ss_pred CCChHHHHHHHHHHHHHhhCCCCCCCCCccCccccCCCChhHHHHHHHHHHHHhCCccChhhhccCCCHHHHHHHHHHhh
Q 033068 45 SANPDEIMHRVIALVKKFDKTDAHKVTETADFQKDLSLDSLDRVELVMAFEEEFSVEIPEEKADKLTCCADVARYIASEA 124 (128)
Q Consensus 45 ~~~~~~i~~~l~~ii~~~l~i~~~~i~~d~~l~~dlGlDSL~~veli~~LEe~fgI~i~~~el~~~~Tv~dl~~~I~~~~ 124 (128)
++ ++++.++|++++++.++ |+++++|..++|||||++++|+..||++|||+||++++..+.||++++++|.+++
T Consensus 26 ~M-~~ei~~~v~~il~e~l~-----I~~d~~l~~dLGlDSLd~veLi~~LEe~FgI~I~~e~l~~~~TV~dlv~~I~~~l 99 (113)
T 2cgq_A 26 AM-EEAINATIQRILRTDRG-----ITANQVLVDDLGFDSLKLFQLITELEDEFDIAISFRDAQNIKTVGDVYTSVAVWF 99 (113)
T ss_dssp CH-HHHHHHHHHHHHTCCSC-----CCTTCBTTTTTCCCHHHHHHHHHHHHHHHTCCCCHHHHHHCCBHHHHHHHHHTTC
T ss_pred cc-HHHHHHHHHHHHHHHhC-----CCCCCchhhhcCCCHHHHHHHHHHHHHHhCCCcCHHHHHhCCCHHHHHHHHHHHH
Confidence 45 78899999999999987 8999999889999999999999999999999999999999999999999999887
Q ss_pred CCC
Q 033068 125 GEK 127 (128)
Q Consensus 125 ~~~ 127 (128)
+++
T Consensus 100 ~~~ 102 (113)
T 2cgq_A 100 PET 102 (113)
T ss_dssp ---
T ss_pred hcc
Confidence 653
No 23
>2kw2_A Specialized acyl carrier protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Rhodopseudomonas palustris} PDB: 2ll8_A* 2lpk_A 3lmo_A
Probab=99.67 E-value=8e-17 Score=108.67 Aligned_cols=77 Identities=23% Similarity=0.378 Sum_probs=71.5
Q ss_pred HHHHHHHHHHHHhhCCCCCCCCCccCccccCCCChhHHHHHHHHHHHHhCCccChhh------hccCCC-----HHHHHH
Q 033068 50 EIMHRVIALVKKFDKTDAHKVTETADFQKDLSLDSLDRVELVMAFEEEFSVEIPEEK------ADKLTC-----CADVAR 118 (128)
Q Consensus 50 ~i~~~l~~ii~~~l~i~~~~i~~d~~l~~dlGlDSL~~veli~~LEe~fgI~i~~~e------l~~~~T-----v~dl~~ 118 (128)
++.++|++++++.+++++++++++++|..++|||||++++++..||++|||+||+++ +..+.| |+++++
T Consensus 3 ~i~~~v~~ii~~~l~~~~~~i~~d~~l~~dLGlDSL~~veLi~~lE~~fgi~i~~~~l~~~~~~~~~~T~~~~Tv~~l~~ 82 (101)
T 2kw2_A 3 STFDRVATIIAETCDIPRETITPESHAIDDLGIDSLDFLDIAFAIDKAFGIKLPLEKWTQEVNDGKATTEQYFVLKNLAA 82 (101)
T ss_dssp CHHHHHHHHHHHHHCCCGGGCCTTCBCCCCCCCCHHHHHHHHHHHHHHTTCCCCHHHHHHHHHTTSSCHHHHHBHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCHhhCCCCcchHHhcCCCHHHHHHHHHHHHHHHCCccCHHHhcchhhhhhccCCCcCcHHHHHH
Confidence 588999999999999999999999999889999999999999999999999999987 578888 999999
Q ss_pred HHHHhhCC
Q 033068 119 YIASEAGE 126 (128)
Q Consensus 119 ~I~~~~~~ 126 (128)
||.+++++
T Consensus 83 ~i~~~~~~ 90 (101)
T 2kw2_A 83 RIDELVAA 90 (101)
T ss_dssp HHHHHHHH
T ss_pred HHHHHhcc
Confidence 99987754
No 24
>2amw_A Hypothetical protein NE2163; all helical protein, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=99.66 E-value=2.5e-16 Score=102.03 Aligned_cols=75 Identities=15% Similarity=0.291 Sum_probs=69.0
Q ss_pred HHHHHHHHHHHhhCCC--CCCCCCccCccccCCC-ChhHHHHHHHHHHHHhCCccChhhhc--cCCCHHHHHHHHHHhhC
Q 033068 51 IMHRVIALVKKFDKTD--AHKVTETADFQKDLSL-DSLDRVELVMAFEEEFSVEIPEEKAD--KLTCCADVARYIASEAG 125 (128)
Q Consensus 51 i~~~l~~ii~~~l~i~--~~~i~~d~~l~~dlGl-DSL~~veli~~LEe~fgI~i~~~el~--~~~Tv~dl~~~I~~~~~ 125 (128)
+.+++++++++.++++ +++++++++|..++|+ ||+++++++..||++|||+||++++. ++.|++++++||.++++
T Consensus 3 i~~~l~~il~~~l~~~~~~~~i~~d~~l~~dlg~~DSl~~~elv~~lE~~fgi~i~~~~l~~~~~~Tv~~l~~~i~~~~~ 82 (83)
T 2amw_A 3 HLEAVRNILGDVLNLGERKHTLTASSVLLGNIPELDSMAVVNVITALEEYFDFSVDDDEISAQTFETLGSLALFVEHKLS 82 (83)
T ss_dssp THHHHHHHHHHHTTCGGGGGSCCTTSCSTTTSTTTTHHHHHHHHHHHHHHTTCCCCTTTCCGGGSSSHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhCCCCccccCCCcchhhhccCccCHHHHHHHHHHHHHHhCCeeCHHhhhHHhcCCHHHHHHHHHHHhc
Confidence 5789999999999998 7899999999668999 99999999999999999999999974 49999999999998764
No 25
>2lki_A Putative uncharacterized protein; helical bundle, acyl carrier, phosphopantetheine, fatty acid biosynthesis, lipid synthesis, PSI-biology; HET: PNS; NMR {Nitrosomonas europaea}
Probab=99.65 E-value=3.8e-16 Score=106.58 Aligned_cols=76 Identities=16% Similarity=0.311 Sum_probs=70.3
Q ss_pred HHHHHHHHHHHHhhCCC--CCCCCCccCccccCCC-ChhHHHHHHHHHHHHhCCccChhh--hccCCCHHHHHHHHHHhh
Q 033068 50 EIMHRVIALVKKFDKTD--AHKVTETADFQKDLSL-DSLDRVELVMAFEEEFSVEIPEEK--ADKLTCCADVARYIASEA 124 (128)
Q Consensus 50 ~i~~~l~~ii~~~l~i~--~~~i~~d~~l~~dlGl-DSL~~veli~~LEe~fgI~i~~~e--l~~~~Tv~dl~~~I~~~~ 124 (128)
++.++|++++++.++++ +++++++++|..++|+ |||++++|+..||++|||+||+++ ...+.||+++++||.+++
T Consensus 24 ~i~~~i~~il~e~l~~~~~~~~i~~d~~L~~dLGl~DSL~~veLi~~lE~~FgI~I~~eel~~~~~~Tv~~l~~~I~~~~ 103 (105)
T 2lki_A 24 QHLEAVRNILGDVLNLGERKHTLTASSVLLGNIPELDSMAVVNVITALEEYFDFSVDDDEISAQTFETLGSLALFVEHKL 103 (105)
T ss_dssp CTHHHHHHHHHHHTTCTTGGGTCCTTSBCBTTBTTCCHHHHHHHHHHHHHHHTSCCCGGGCCGGGGSBHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhCCCcccccCCCCCchhhhcCcccHHHHHHHHHHHHHHhCCCcCHHHhhHHhcCCHHHHHHHHHHHh
Confidence 47889999999999998 7899999999678999 999999999999999999999999 468999999999999876
Q ss_pred C
Q 033068 125 G 125 (128)
Q Consensus 125 ~ 125 (128)
+
T Consensus 104 ~ 104 (105)
T 2lki_A 104 S 104 (105)
T ss_dssp T
T ss_pred c
Confidence 4
No 26
>2lte_A Specialized acyl carrier protein; APO protein, transferase; NMR {Pseudomonas aeruginosa}
Probab=99.45 E-value=1.2e-17 Score=113.61 Aligned_cols=79 Identities=16% Similarity=0.309 Sum_probs=74.5
Q ss_pred CChHHHHHHHHHHHHHhhCCCCCCCCCccCccccCCCChhHHHHHHHHHHHHhCCccChhhhccCCCHHHHHHHHHHhhC
Q 033068 46 ANPDEIMHRVIALVKKFDKTDAHKVTETADFQKDLSLDSLDRVELVMAFEEEFSVEIPEEKADKLTCCADVARYIASEAG 125 (128)
Q Consensus 46 ~~~~~i~~~l~~ii~~~l~i~~~~i~~d~~l~~dlGlDSL~~veli~~LEe~fgI~i~~~el~~~~Tv~dl~~~I~~~~~ 125 (128)
++++ +.++|++++++.+++++++++++++| .++|+|||++++|+..||++||++||++++..+.||++++++|.++++
T Consensus 23 M~~e-i~~~l~~ila~~l~i~~~~I~~d~~l-~dLGlDSL~~veL~~~lE~~fgi~i~~~~l~~~~TV~~l~~~I~~~~~ 100 (103)
T 2lte_A 23 MPND-MEDHLLTVLSVASGVPKEEISRDSRM-EDLAFDSLVVSELSLKLRKEFGVTGVDDELDLLETVDELFQLVEKHRA 100 (103)
Confidence 4554 99999999999999999999999999 999999999999999999999999999999999999999999998875
Q ss_pred C
Q 033068 126 E 126 (128)
Q Consensus 126 ~ 126 (128)
+
T Consensus 101 ~ 101 (103)
T 2lte_A 101 A 101 (103)
Confidence 4
No 27
>2ehs_A ACP, acyl carrier protein; lipid transport, structural genomics, NPPSFA, national proje protein structural and functional analyses; 1.30A {Aquifex aeolicus} PDB: 2eht_A
Probab=99.64 E-value=6.9e-16 Score=97.52 Aligned_cols=75 Identities=43% Similarity=0.695 Sum_probs=70.8
Q ss_pred HHHHHHHHHHHhhCCCCCCCCCccCccccCCCChhHHHHHHHHHHHHhCCccChhhhccCCCHHHHHHHHHHhhC
Q 033068 51 IMHRVIALVKKFDKTDAHKVTETADFQKDLSLDSLDRVELVMAFEEEFSVEIPEEKADKLTCCADVARYIASEAG 125 (128)
Q Consensus 51 i~~~l~~ii~~~l~i~~~~i~~d~~l~~dlGlDSL~~veli~~LEe~fgI~i~~~el~~~~Tv~dl~~~I~~~~~ 125 (128)
+.+++.+++++.+++++++++++++|..++|+||+++++++..+|++||+++|..++..+.|++++++++.++.+
T Consensus 2 i~~~l~~~~~~~l~~~~~~i~~~~~l~~~lG~DSl~~~~l~~~le~~~gi~i~~~~~~~~~tv~~l~~~i~~~~~ 76 (77)
T 2ehs_A 2 LEERVKEIIAEQLGVEKEKITPEAKFVEDLGADSLDVVELIMAFEEEFGIEIPDEDAEKIQTVGDVINYLKEKVG 76 (77)
T ss_dssp HHHHHHHHHHHHHCCCGGGCCTTCBTTTTTCCCHHHHHHHHHHHHHHHTCCCCHHHHHTCCBHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHhCCChhhCCCccchhhccCCCHHHHHHHHHHHHHHhCCccCHHHHHHcCCHHHHHHHHHHHhc
Confidence 678899999999999999999999998899999999999999999999999999999999999999999998753
No 28
>2jq4_A AGR_C_4658P, hypothetical protein ATU2571; ATC2521, unknown function, ATC, S genomics, PSI-2, protein structure initiative; NMR {Agrobacterium tumefaciens} SCOP: a.28.1.1
Probab=99.64 E-value=3.8e-16 Score=106.31 Aligned_cols=82 Identities=17% Similarity=0.317 Sum_probs=68.5
Q ss_pred CCCChHHHHHHHHHHHHHhhC--CCCCCCCCccCccccCCCChhHHHHHHHHHHHHhCCccChhhhc--cCCCHHHHHHH
Q 033068 44 TSANPDEIMHRVIALVKKFDK--TDAHKVTETADFQKDLSLDSLDRVELVMAFEEEFSVEIPEEKAD--KLTCCADVARY 119 (128)
Q Consensus 44 ~~~~~~~i~~~l~~ii~~~l~--i~~~~i~~d~~l~~dlGlDSL~~veli~~LEe~fgI~i~~~el~--~~~Tv~dl~~~ 119 (128)
++.+++++.++|+++|++.++ ++.++++++++| .++|+|||++++|+..||++|||+||++++. .+.|+++++++
T Consensus 16 ~~~~~~~i~~~i~~il~~~l~~~v~~~~i~~d~~l-~dlGlDSL~~veLv~~lE~~fgI~i~~~~l~~~~~~tv~~l~~~ 94 (105)
T 2jq4_A 16 NLYFQGHMNATIREILAKFGQLPTPVDTIADEADL-YAAGLSSFASVQLMLGIEEAFDIEFPDNLLNRKSFASIKAIEDT 94 (105)
T ss_dssp -------CHHHHHHHHHHTSCCSSCGGGCCTTSCG-GGGTCCHHHHHHHHHHHHHHHSCCCCHHHHSSGGGGCHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHhccCCCcccCCCCCCH-hhcCCCHHHHHHHHHHHHHHHCCCcCHHHhhhhhcCCHHHHHHH
Confidence 457888999999999999875 568899999999 5999999999999999999999999999986 88999999999
Q ss_pred HHHhhCC
Q 033068 120 IASEAGE 126 (128)
Q Consensus 120 I~~~~~~ 126 (128)
|....++
T Consensus 95 v~~~~~~ 101 (105)
T 2jq4_A 95 VKLILDG 101 (105)
T ss_dssp HHHHHHT
T ss_pred HHHHhcc
Confidence 9876654
No 29
>1or5_A Acyl carrier protein; ACP, biosynthesis, frenolicin, holo, polyketide synthase, PKS, biosynthetic protein; NMR {Streptomyces roseofulvus} SCOP: a.28.1.1
Probab=99.62 E-value=2e-16 Score=102.19 Aligned_cols=76 Identities=14% Similarity=0.272 Sum_probs=70.6
Q ss_pred HHHHHHHHHHHHhhCCCCC-CCC--CccCccccCCCChhHHHHHHHHHHHHhCCccChhhhccCCCHHHHHHHHHHhhCC
Q 033068 50 EIMHRVIALVKKFDKTDAH-KVT--ETADFQKDLSLDSLDRVELVMAFEEEFSVEIPEEKADKLTCCADVARYIASEAGE 126 (128)
Q Consensus 50 ~i~~~l~~ii~~~l~i~~~-~i~--~d~~l~~dlGlDSL~~veli~~LEe~fgI~i~~~el~~~~Tv~dl~~~I~~~~~~ 126 (128)
.+.+++++++++.++++++ +++ ++++| .++|+|||++++++..||++||+++|++++..+.|+++++++|.+++++
T Consensus 4 ~~~~~l~~~l~~~l~~~~~~~i~~~~~~~~-~dlG~DSL~~vel~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~~~~ 82 (83)
T 1or5_A 4 LTVDDLKKLLAETAGEDDSVDLAGELDTPF-VDLGYDSLALLETAAVLQQRYGIALTDETVGRLGTPRELLDEVNTTPAT 82 (83)
T ss_dssp SCHHHHHHHHHHHSCCCSSCCGGGCSSSCH-HHHSCCHHHHHHHHHHHHTTSCCCCSHHHHHHCCCSHHHHHHHTTCCSC
T ss_pred HHHHHHHHHHHHHhCCCcccccCCCCCCcH-HHhCCCHHHHHHHHHHHHHHHCCccCHHHHhccCCHHHHHHHHHHHhcC
Confidence 4678899999999999877 899 99998 9999999999999999999999999999999999999999999887654
No 30
>2l3v_A ACP, acyl carrier protein; structural genomi seattle structural genomics center for infectious disease, lipid binding protein; NMR {Brucella melitensis}
Probab=99.61 E-value=5.8e-17 Score=103.44 Aligned_cols=76 Identities=46% Similarity=0.674 Sum_probs=72.5
Q ss_pred HHHHHHHHHHHHHhhCCCCCCCCCccCccccCCCChhHHHHHHHHHHHHhCCccChhhhccCCCHHHHHHHHHHhh
Q 033068 49 DEIMHRVIALVKKFDKTDAHKVTETADFQKDLSLDSLDRVELVMAFEEEFSVEIPEEKADKLTCCADVARYIASEA 124 (128)
Q Consensus 49 ~~i~~~l~~ii~~~l~i~~~~i~~d~~l~~dlGlDSL~~veli~~LEe~fgI~i~~~el~~~~Tv~dl~~~I~~~~ 124 (128)
+++.+++++++++.+++++++++++++|..++|+||+++++++..||++||+++|..++..+.|++++++++.+++
T Consensus 3 ~~i~~~l~~~~~~~l~~~~~~i~~~~~l~~~lG~DSl~~~~l~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~~ 78 (79)
T 2l3v_A 3 SDTAERVKKIVVEHLGVDADKVTEGASFIDDLGADSLDTVELVMAFEEEFGVEIPDDAAETILTVGDAVKFIDKAS 78 (79)
T ss_dssp THHHHHHHHHHHHHTCCCSTTCCTTCCHHHHTCCCSSSSSSTTTTHHHHTTCCCCHHHHTTCSSSSTTHHHHHHTC
T ss_pred HHHHHHHHHHHHHHhCCCHhhCCCCCccccccCCCHHHHHHHHHHHHHHHCCCCCHHHHHHcCCHHHHHHHHHHhc
Confidence 4789999999999999999999999999889999999999999999999999999999999999999999998865
No 31
>1nq4_A Oxytetracycline polyketide synthase acyl carrier protein; solution structure, dynamics, ACP, biosynthetic protein; NMR {Streptomyces rimosus} SCOP: a.28.1.1
Probab=99.60 E-value=1.6e-15 Score=101.21 Aligned_cols=73 Identities=16% Similarity=0.283 Sum_probs=63.9
Q ss_pred HHHHHHHHHHhhCCC----CCCCCCccCccccCCCChhHHHHHHHHHHHHhCCccChhhhccCCCHHHHHHHHHHhhC
Q 033068 52 MHRVIALVKKFDKTD----AHKVTETADFQKDLSLDSLDRVELVMAFEEEFSVEIPEEKADKLTCCADVARYIASEAG 125 (128)
Q Consensus 52 ~~~l~~ii~~~l~i~----~~~i~~d~~l~~dlGlDSL~~veli~~LEe~fgI~i~~~el~~~~Tv~dl~~~I~~~~~ 125 (128)
.++|++++++.++.+ +++++++++| .++|+|||+.++++..||++|||+||++++..+.|+++++++|.++++
T Consensus 6 ~~~l~~ii~~~l~~~~~~~~~~i~~d~~~-~dlG~DSL~~vel~~~le~~fgi~i~~~~l~~~~Tv~~l~~~i~~~~~ 82 (95)
T 1nq4_A 6 LSDLLTLLRECAGEEESIDLGGDVEDVAF-DALGYDSLALLNTVGRIERDYGVQLGDDAVEKATTPRALIEMTNASLT 82 (95)
T ss_dssp HHHHHHHHHHHHTCSSTTCSCSCCSSSCH-HHHTCCSHHHHHHHHHHHHHTCCCSCTTHHHHCCSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccccccccccCCCCCCh-hhhCCCHHHHHHHHHHHHHHHCCccCHHHHHcCCCHHHHHHHHHHHHh
Confidence 345666677776654 3489999999 899999999999999999999999999999999999999999998764
No 32
>2afd_A Protein ASL1650; twisted antiparallel helical bundle, acyl carrier protein FA structural genomics, PSI, protein structure initiative; NMR {Nostoc SP} PDB: 2afe_A
Probab=99.58 E-value=1.1e-14 Score=93.88 Aligned_cols=81 Identities=15% Similarity=0.148 Sum_probs=76.4
Q ss_pred CCCCChHHHHHHHHHHHHHhhCCCCCCCCCccCccccCCCChhHHHHHHHHHHHHhCCccChhhhccCCCHHHHHHHHHH
Q 033068 43 STSANPDEIMHRVIALVKKFDKTDAHKVTETADFQKDLSLDSLDRVELVMAFEEEFSVEIPEEKADKLTCCADVARYIAS 122 (128)
Q Consensus 43 ~~~~~~~~i~~~l~~ii~~~l~i~~~~i~~d~~l~~dlGlDSL~~veli~~LEe~fgI~i~~~el~~~~Tv~dl~~~I~~ 122 (128)
..+.+.+++.+++.+++++.++++++.++++.+| .++|+||+..+++...|++.||+++|..++..+.|++++++++.+
T Consensus 7 ~~~~~~~~~~~~l~~~~~~~l~~~~~~i~~~~~~-~~lG~DSl~~~~l~~~l~~~~~~~i~~~~~~~~~ti~~la~~l~~ 85 (88)
T 2afd_A 7 IQPASVEDIQSWLIDQFAQQLDVDPDDIDMEESF-DNYDLNSSKALILLGRLEKWLGKELNPVLIFNYPTIAQLAKRLGE 85 (88)
T ss_dssp CCCSSHHHHHHHHHHHHHHHHTSCGGGCCTTSCG-GGTTCCSTHHHHHHHHHHHHTTSCCCGGGTTTCCSHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHHHHHHCcCHHHcCCCCCH-HHcCccHHHHHHHHHHHHHHHCCCcCHHHHHhCCCHHHHHHHHHH
Confidence 4557888999999999999999998999999999 899999999999999999999999999999999999999999987
Q ss_pred hh
Q 033068 123 EA 124 (128)
Q Consensus 123 ~~ 124 (128)
++
T Consensus 86 ~~ 87 (88)
T 2afd_A 86 LY 87 (88)
T ss_dssp HT
T ss_pred Hh
Confidence 65
No 33
>1fh1_A NODF, nodulation protein F; ROOT nodulation factor, protein backbone fold, lipid binding protein; NMR {Rhizobium leguminosarum} SCOP: i.11.1.1
Probab=99.56 E-value=1.7e-16 Score=105.15 Aligned_cols=78 Identities=18% Similarity=0.349 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHhhCC--------CCCCCCCccCccccCCCChhHHHHHHHHHHHHhCCccC---hhhhccCCCHHHHH
Q 033068 49 DEIMHRVIALVKKFDKT--------DAHKVTETADFQKDLSLDSLDRVELVMAFEEEFSVEIP---EEKADKLTCCADVA 117 (128)
Q Consensus 49 ~~i~~~l~~ii~~~l~i--------~~~~i~~d~~l~~dlGlDSL~~veli~~LEe~fgI~i~---~~el~~~~Tv~dl~ 117 (128)
+++.+++++++++.++. ++++++++++| .++|||||++++++..||++||++|| ..++..+.||++++
T Consensus 3 ~~i~~~i~~ii~~~~~~~~~~~~~~~~~~i~~d~~l-~dlg~DSl~~vel~~~lE~~fgi~i~~~~~~~~~~~~Tv~~l~ 81 (92)
T 1fh1_A 3 DQLTLEIISAINKLVKAENGERTSVALGEITTDTEL-TSLGIDSLGLADVLWDLEQLYGIKIEMNTADAWSNLNNIGDVV 81 (92)
T ss_dssp --CHHHHHHHHHHHC-----------------------------CTTTTHHHHHHHC-----------------CTTTST
T ss_pred hHHHHHHHHHHHHHHHhccccccCCCHhhCCCCCCH-hhcCCChHHHHHHHHHHHHHhCCccCCccHhHHhhcCCHHHHH
Confidence 35678888888888874 45589999999 99999999999999999999999999 67889999999999
Q ss_pred HHHHHhhCCC
Q 033068 118 RYIASEAGEK 127 (128)
Q Consensus 118 ~~I~~~~~~~ 127 (128)
+||.++++++
T Consensus 82 ~~i~~~~~~~ 91 (92)
T 1fh1_A 82 EAVRGLLTKE 91 (92)
T ss_dssp HHHHC-----
T ss_pred HHHHHHhhcc
Confidence 9999988765
No 34
>2kr5_A PKS, aflatoxin biosynthesis polyketide synthase; acyl carrrier protein, holo, phosphopantetheine, transport protein; HET: PNS; NMR {Aspergillus parasiticus}
Probab=99.52 E-value=3.8e-14 Score=92.10 Aligned_cols=79 Identities=15% Similarity=0.292 Sum_probs=73.7
Q ss_pred CCChHHHHHHHHHHHHHhhCCCCCCCCCccCccccCCCChhHHHHHHHHHHHHhCCccCh--hhhccCCCHHHHHHHHHH
Q 033068 45 SANPDEIMHRVIALVKKFDKTDAHKVTETADFQKDLSLDSLDRVELVMAFEEEFSVEIPE--EKADKLTCCADVARYIAS 122 (128)
Q Consensus 45 ~~~~~~i~~~l~~ii~~~l~i~~~~i~~d~~l~~dlGlDSL~~veli~~LEe~fgI~i~~--~el~~~~Tv~dl~~~I~~ 122 (128)
+...+++.+.+++++++.+++++++++++++| .++|+|||..+++...|+++||+++|. .++..+.|+++++++|.+
T Consensus 6 ~~~~~~~~~~l~~~~~~~l~~~~~~i~~~~~~-~~lG~DSL~~~~l~~~l~~~~g~~l~~~~~~l~~~~Tv~~la~~l~~ 84 (89)
T 2kr5_A 6 VGVSNEKLDAVMRVVSEESGIALEELTDDSNF-ADMGIDSLSSMVIGSRFREDLGLDLGPEFSLFIDCTTVRALKDFMLG 84 (89)
T ss_dssp CCCCHHHHHHHHHHHHHHHCCCGGGCCTTCBH-HHHTCCHHHHHHHHHHHHHTTCCCCCSSCCTTTSCCBHHHHHHHHHT
T ss_pred CCccHHHHHHHHHHHHHHHCcCHHHCCCCCCH-HHcCccHHHHHHHHHHHHHHHCCCCCchHHHHHcCCCHHHHHHHHHH
Confidence 35667899999999999999999999999999 999999999999999999999999999 999999999999999987
Q ss_pred hh
Q 033068 123 EA 124 (128)
Q Consensus 123 ~~ 124 (128)
..
T Consensus 85 ~~ 86 (89)
T 2kr5_A 85 SG 86 (89)
T ss_dssp TT
T ss_pred hC
Confidence 43
No 35
>2liu_A CURA; holo state, transferase; NMR {Lyngbya majuscula} PDB: 2liw_A*
Probab=99.50 E-value=4.4e-14 Score=93.06 Aligned_cols=80 Identities=21% Similarity=0.295 Sum_probs=75.6
Q ss_pred CChHHHHHHHHHHHHHhhCCCCCCCCCccCccccCCCChhHHHHHHHHHHHHhCCccChhhhccCCCHHHHHHHHHHhhC
Q 033068 46 ANPDEIMHRVIALVKKFDKTDAHKVTETADFQKDLSLDSLDRVELVMAFEEEFSVEIPEEKADKLTCCADVARYIASEAG 125 (128)
Q Consensus 46 ~~~~~i~~~l~~ii~~~l~i~~~~i~~d~~l~~dlGlDSL~~veli~~LEe~fgI~i~~~el~~~~Tv~dl~~~I~~~~~ 125 (128)
.+.+++.+.+.+++++.++++.++++++.+| .++|+|||..+++...|++.||++++..++..+.|+++++++|.+++.
T Consensus 17 ~~~~~~~~~l~~~~~~~l~~~~~~i~~~~~~-~~lG~DSl~~~~l~~~l~~~~g~~l~~~~l~~~~ti~~la~~l~~~~~ 95 (99)
T 2liu_A 17 VNLSEIKQVLKQQLAEALYTEESEIAEDQKF-VDLGLDSIVGVEWTTTINQTYNLNLKATKLYDYPTLLELSGYIAQILS 95 (99)
T ss_dssp CCHHHHHHHHHHHHHHHTTSCGGGCCSSSCH-HHHTCCHHHHHHHHHHHHHHHTCCCCHHHHHHCCSHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHCcCHHHcCCCCCH-HHhCccHHHHHHHHHHHHHHHCCCcCHHHHHhCCCHHHHHHHHHHHhh
Confidence 5788999999999999999999999999999 899999999999999999999999999999999999999999988764
Q ss_pred C
Q 033068 126 E 126 (128)
Q Consensus 126 ~ 126 (128)
.
T Consensus 96 ~ 96 (99)
T 2liu_A 96 S 96 (99)
T ss_dssp H
T ss_pred c
Confidence 3
No 36
>2ju1_A Erythronolide synthase; carrier protein domain, modular polyketide synthase, alpha- helical bundle, acyltransferase; NMR {Saccharopolyspora erythraea} PDB: 2ju2_A
Probab=99.48 E-value=6.1e-14 Score=92.12 Aligned_cols=78 Identities=22% Similarity=0.278 Sum_probs=72.3
Q ss_pred CChHHHHHHHHHHHHHhhC-CCCCCCCCccCccccCCCChhHHHHHHHHHHHHhCCccChhhhccCCCHHHHHHHHHHhh
Q 033068 46 ANPDEIMHRVIALVKKFDK-TDAHKVTETADFQKDLSLDSLDRVELVMAFEEEFSVEIPEEKADKLTCCADVARYIASEA 124 (128)
Q Consensus 46 ~~~~~i~~~l~~ii~~~l~-i~~~~i~~d~~l~~dlGlDSL~~veli~~LEe~fgI~i~~~el~~~~Tv~dl~~~I~~~~ 124 (128)
...+.+.+.+.+++++.++ .+++.++++.+| .++|+|||..+++...++++||+++|..++..+.|++++++++.+++
T Consensus 16 ~~~~~~~~~l~~~~~~~l~~~~~~~i~~~~~f-~~lG~DSL~a~~l~~~l~~~~g~~l~~~~l~~~~ti~~la~~l~~~l 94 (95)
T 2ju1_A 16 ERTAELVRLVRTSTATVLGHDDPKAVRATTPF-KELGFDSLAAVRLRNLLNAATGLRLPSTLVFDHPNASAVAGFLDAEL 94 (95)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCGGGCCSSSCH-HHHTCSSHHHHHHHHHHGGGTSSCCCTTHHHHCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHCCCChhhCCCCCCH-HHcCCcHHHHHHHHHHHHHHHCCCCChhHHhcCCCHHHHHHHHHHHc
Confidence 3446688899999999999 788899999999 99999999999999999999999999999999999999999998875
No 37
>2l22_A Mupirocin didomain acyl carrier protein; biosynthetic protein; NMR {Pseudomonas fluorescens}
Probab=99.41 E-value=4.3e-13 Score=100.09 Aligned_cols=82 Identities=12% Similarity=0.243 Sum_probs=75.6
Q ss_pred CCCCChHHHHHHHHHHHHHhhCCCCCCCCCccCccccCCCChhHHHHHHHHHHHHhCCccChhhhccCCCHHHHHHHHHH
Q 033068 43 STSANPDEIMHRVIALVKKFDKTDAHKVTETADFQKDLSLDSLDRVELVMAFEEEFSVEIPEEKADKLTCCADVARYIAS 122 (128)
Q Consensus 43 ~~~~~~~~i~~~l~~ii~~~l~i~~~~i~~d~~l~~dlGlDSL~~veli~~LEe~fgI~i~~~el~~~~Tv~dl~~~I~~ 122 (128)
....+.+++.++|++++++++++++++|+++.+| .++|+|||+.+++...|+++||+++|..++..+.|+++++++|..
T Consensus 19 ~~~~~~~~i~~~l~~~~a~~l~~~~~~i~~~~~f-~~lG~DSl~~~el~~~l~~~~g~~l~~~~~~~~~Ti~~la~~l~~ 97 (212)
T 2l22_A 19 SHMVADDECAQFLRQSLAAMLYCEPGQIRDGSRF-LELGLDSVIAAQWIREINKHYQLKIPADGIYTYPVFKAFTQWVGT 97 (212)
T ss_dssp ---CCTTHHHHHHHHHHHHHTTCCTTSCCTTCBH-HHHTCCHHHHHHHHHHHHHHTTCCCCTTHHHHCCBHHHHHHHHHT
T ss_pred CCCCCHHHHHHHHHHHHHHHHCcCHHHcCCCCCH-HHhCCcHHHHHHHHHHHHHHHCCCCCHHHHHcCCCHHHHHHHHHH
Confidence 3447788999999999999999999999999999 899999999999999999999999999999999999999999987
Q ss_pred hhC
Q 033068 123 EAG 125 (128)
Q Consensus 123 ~~~ 125 (128)
+..
T Consensus 98 ~~~ 100 (212)
T 2l22_A 98 QLQ 100 (212)
T ss_dssp TSC
T ss_pred hcc
Confidence 764
No 38
>2cg5_B Fatty acid synthase; transferase-hydrolase complex, transferase/hydrolase (comple fatty acid biosynthesis, phosphopantetheine transferase; HET: COA; 2.7A {Homo sapiens} PDB: 2png_A
Probab=99.39 E-value=1.2e-12 Score=87.38 Aligned_cols=70 Identities=17% Similarity=0.241 Sum_probs=63.5
Q ss_pred HHHHHHHHHhhCCC-CCCCCCccCccccCCCChhHHHHHHHHHHHHhCCccChhhhccCCCHHHHHHHHHHhh
Q 033068 53 HRVIALVKKFDKTD-AHKVTETADFQKDLSLDSLDRVELVMAFEEEFSVEIPEEKADKLTCCADVARYIASEA 124 (128)
Q Consensus 53 ~~l~~ii~~~l~i~-~~~i~~d~~l~~dlGlDSL~~veli~~LEe~fgI~i~~~el~~~~Tv~dl~~~I~~~~ 124 (128)
..+++.++++++++ +++|+++.+| .++|+|||+.+||...||++||+++|..++... |++++++++....
T Consensus 9 ~~v~~~va~iLg~~~~~~I~~~~~l-~dLG~DSL~aVELr~~Le~~fgi~lp~~~l~~~-Ti~~La~~v~~~~ 79 (91)
T 2cg5_B 9 RDLVEAVAHILGIRDLAAVNLDSSL-ADLGLDALMSVEVRQTLERELNLVLSVREVRQL-TLRKLQELSSKAD 79 (91)
T ss_dssp TTHHHHHHHHTTCCSCTTSCTTSBT-TTTTCCHHHHHHHHHHHHHHHCCCCCHHHHHTC-BHHHHHHHHHCC-
T ss_pred HHHHHHHHHHHCCCchhhCCCCCCH-HHhCCcchHHHHHHHHHHHHHCCCCCHHHHHhC-CHHHHHHHHhccc
Confidence 46888999999996 5899999999 999999999999999999999999999999875 9999999987643
No 39
>4i4d_A Peptide synthetase NRPS type II-PCP; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MLY; 2.10A {Streptomyces verticillus}
Probab=99.39 E-value=1.9e-12 Score=85.36 Aligned_cols=77 Identities=13% Similarity=0.116 Sum_probs=70.7
Q ss_pred ChHHHHHHHHHHHHHhhCCCCCCCCCccCccccCCCChhHHHHHHHHHHHHhCCccChhhhccCCCHHHHHHHHHHhhCC
Q 033068 47 NPDEIMHRVIALVKKFDKTDAHKVTETADFQKDLSLDSLDRVELVMAFEEEFSVEIPEEKADKLTCCADVARYIASEAGE 126 (128)
Q Consensus 47 ~~~~i~~~l~~ii~~~l~i~~~~i~~d~~l~~dlGlDSL~~veli~~LEe~fgI~i~~~el~~~~Tv~dl~~~I~~~~~~ 126 (128)
...++.++|.+++++++++ +.++++++| .++|.|||..++++..|+++||++++..++....|+++++++|.+....
T Consensus 13 ~~~~~e~~l~~i~~~vL~~--~~i~~~~~F-f~lGgdSL~a~~l~~~l~~~~g~~l~~~~l~~~pTi~~la~~l~~~~~~ 89 (93)
T 4i4d_A 13 RRRALERDIAAIWAETLGR--DSVGPHEDF-AALGGNSIHAIXITNRVEELVDAELSIRVLLETRTVAGMTDHVHATLTG 89 (93)
T ss_dssp HHHHHHHHHHHHHHHHHTC--SCCCTTCCT-TTTTCCHHHHHHHHHHHHHHHTSCCCHHHHHHHCSHHHHHHHHHHHTC-
T ss_pred CCCHHHHHHHHHHHHHhCC--CCCCCCCCH-HHcCCcHHHHHHHHHHHHHHhCCCCCHHHHHcCCCHHHHHHHHHHHccc
Confidence 3567899999999999999 469999999 8999999999999999999999999999999999999999999987654
No 40
>2l22_A Mupirocin didomain acyl carrier protein; biosynthetic protein; NMR {Pseudomonas fluorescens}
Probab=99.35 E-value=4.2e-12 Score=94.70 Aligned_cols=80 Identities=15% Similarity=0.208 Sum_probs=74.5
Q ss_pred CChHHHHHHHHHHHHHhhCCCCCCCCCccCccccCCCChhHHHHHHHHHHHHhCCccChhhhccCCCHHHHHHHHHHhhC
Q 033068 46 ANPDEIMHRVIALVKKFDKTDAHKVTETADFQKDLSLDSLDRVELVMAFEEEFSVEIPEEKADKLTCCADVARYIASEAG 125 (128)
Q Consensus 46 ~~~~~i~~~l~~ii~~~l~i~~~~i~~d~~l~~dlGlDSL~~veli~~LEe~fgI~i~~~el~~~~Tv~dl~~~I~~~~~ 125 (128)
.+.+.+.+++.+++++.+++++++++++.+| .++|+||+..++++..|+++||++++..++..+.|+++++++|.++.+
T Consensus 126 ~~~~~i~~~l~~~~~~~l~~~~~~i~~~~~f-~~lG~DSl~a~el~~~l~~~~g~~l~~~~l~~~~Ti~~La~~l~~~~~ 204 (212)
T 2l22_A 126 AQRESIQDYLKQSLGELLFLDPGQLRSGAQF-LDLGMDSVTGTQWMRGVSRHFSIQLAADAIYTWPTLKSLADEVDRRVQ 204 (212)
T ss_dssp HHHHHHHHHHHHHHHHHHSSCSSSCCSSCCG-GGGCSSSHHHHHHHHHHHHHTTCCCCGGGGGGCCSHHHHHHHHHHHHC
T ss_pred cCHHHHHHHHHHHHHHHHCCChhhCCCCCCH-HHhCCCHHHHHHHHHHHHHHHCCCcCHHHHHcCCCHHHHHHHHHHHhc
Confidence 3467899999999999999999999999999 899999999999999999999999999999999999999999998765
Q ss_pred C
Q 033068 126 E 126 (128)
Q Consensus 126 ~ 126 (128)
.
T Consensus 205 ~ 205 (212)
T 2l22_A 205 L 205 (212)
T ss_dssp -
T ss_pred c
Confidence 4
No 41
>1dny_A Non-ribosomal peptide synthetase peptidyl carrier protein; four-helix bundle, modular enzyme, domain, flexible region; NMR {Brevibacillus brevis} SCOP: a.28.1.2 PDB: 2gdw_A 2gdx_A 2gdy_A 2k2q_A
Probab=99.35 E-value=4.2e-12 Score=83.70 Aligned_cols=75 Identities=15% Similarity=0.243 Sum_probs=68.8
Q ss_pred CChHHHHHHHHHHHHHhhCCCCCCCCCccCccccCCCChhHHHHHHHHHHHHhCCccChhhhccCCCHHHHHHHHHHh
Q 033068 46 ANPDEIMHRVIALVKKFDKTDAHKVTETADFQKDLSLDSLDRVELVMAFEEEFSVEIPEEKADKLTCCADVARYIASE 123 (128)
Q Consensus 46 ~~~~~i~~~l~~ii~~~l~i~~~~i~~d~~l~~dlGlDSL~~veli~~LEe~fgI~i~~~el~~~~Tv~dl~~~I~~~ 123 (128)
....++.++|.++++++++++ .++++++| .++|.|||..++++..|+++||++++..++....|++++++++.+.
T Consensus 10 ~p~~~~e~~l~~i~~~vL~~~--~i~~~~~F-f~lGgdSL~a~~l~~~l~~~~g~~l~~~~l~~~~Ti~~la~~i~~~ 84 (91)
T 1dny_A 10 APTNAVESKLAEIWERVLGVS--GIGILDNF-FQIGGHSLKAMAVAAQVHREYQVELPLKVLFAQPTIKALAQYVATR 84 (91)
T ss_dssp CCSSHHHHHHHHHHHHHHTCS--SCCSSCCT-TSSCCSSHHHHHHHHHHHHHCCCCCCHHHHHHSCSHHHHHHHHHC-
T ss_pred CCCCHHHHHHHHHHHHHhCCC--CCCCCCCH-HHcCCCHHHHHHHHHHHHHHHCCCCCHHHHHcCCCHHHHHHHHHHh
Confidence 345678999999999999995 69999999 8999999999999999999999999999999999999999999764
No 42
>2cq8_A 10-formyltetrahydrofolate dehydrogenase; 10-FTHFDH, PP-binding, acyl carrier protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.96 E-value=1.6e-09 Score=74.46 Aligned_cols=75 Identities=17% Similarity=0.183 Sum_probs=68.8
Q ss_pred ChHHHHHHHHHHHHHhhC-CCCCCCCCccCccccCCCChhHHHHHHHHHHHHhC-CccChhhhccCCCHHHHHHHHHHhh
Q 033068 47 NPDEIMHRVIALVKKFDK-TDAHKVTETADFQKDLSLDSLDRVELVMAFEEEFS-VEIPEEKADKLTCCADVARYIASEA 124 (128)
Q Consensus 47 ~~~~i~~~l~~ii~~~l~-i~~~~i~~d~~l~~dlGlDSL~~veli~~LEe~fg-I~i~~~el~~~~Tv~dl~~~I~~~~ 124 (128)
.+.++..+|.+++.++++ + ..|.++++| .++|-|||.++.++..|+++|+ ++++..++...+|+++++.+|..++
T Consensus 22 ~~~~~E~~La~iW~~vL~~~--~~i~~~ddF-F~lGG~SLla~rLv~~ir~~~g~v~l~l~~Lf~~pTl~~lA~~l~~~~ 98 (110)
T 2cq8_A 22 AELVTAEAVRSVWQRILPKV--LEVEDSTDF-FKSGAASVDVVRLVEEVKELCDGLELENEDVYMASTFGDFIQLLVRKL 98 (110)
T ss_dssp THHHHHHHHHHHHHHHCSSC--SCCCTTCBH-HHHHCCTTHHHHHHHHHHHHHTSCCCCHHHHHHCCBHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHhCCC--CCCCCCCCH-HhcCChHHHHHHHHHHHHHHcCCCCcCHHHHHhCCCHHHHHHHHHHHh
Confidence 446689999999999998 5 459999999 8999999999999999999999 9999999999999999999998765
No 43
>3tej_A Enterobactin synthase component F; nonribosomal peptide, thioesterase, carrier domain, ATP- BIN enterobactin biosynthesis, ION transport, iron; HET: UF0; 1.90A {Escherichia coli} PDB: 2roq_A
Probab=98.90 E-value=4.1e-09 Score=82.16 Aligned_cols=76 Identities=17% Similarity=0.143 Sum_probs=68.9
Q ss_pred CChHHHHHHHHHHHHHhhCCCCCCCCCccCccccCCCChhHHHHHHHHHHHHhCCccChhhhccCCCHHHHHHHHHHhh
Q 033068 46 ANPDEIMHRVIALVKKFDKTDAHKVTETADFQKDLSLDSLDRVELVMAFEEEFSVEIPEEKADKLTCCADVARYIASEA 124 (128)
Q Consensus 46 ~~~~~i~~~l~~ii~~~l~i~~~~i~~d~~l~~dlGlDSL~~veli~~LEe~fgI~i~~~el~~~~Tv~dl~~~I~~~~ 124 (128)
....++...|.++++++++++. ++.+++| .++|.|||..++++..|+++||++++..++....|+++++++|....
T Consensus 7 ~p~~~~e~~l~~~~~~~l~~~~--i~~~~~f-f~lGgdSl~a~~l~~~l~~~~~~~~~~~~~~~~~t~~~la~~~~~~~ 82 (329)
T 3tej_A 7 APKAGSETIIAAAFSSLLGCDV--QDADADF-FALGGHXLLAMKLAAQLSRQVARQVTPGQVMVASTVAKLATIIDAEE 82 (329)
T ss_dssp CCCTTHHHHHHHHHHHHHTC-C--CSTTCBT-TTTTCCHHHHHHHHHHHHHHHTSCCCHHHHHHCCBHHHHHHHHHSCT
T ss_pred CCCCHHHHHHHHHHHHHhCCCC--CCCCCCH-HHcCCcHHHHHHHHHHHHHHHCCCCCHHHHHhCCCHHHHHHHHHhhc
Confidence 4455688999999999999964 8999999 89999999999999999999999999999999999999999998654
No 44
>2jgp_A Tyrocidine synthetase 3; multifunctional enzyme, antibiotic biosynthesis, condensatio domain, peptide bond formation, ligase; 1.85A {Brevibacillus brevis}
Probab=98.60 E-value=1.2e-07 Score=77.38 Aligned_cols=75 Identities=19% Similarity=0.232 Sum_probs=68.9
Q ss_pred CChHHHHHHHHHHHHHhhCCCCCCCCCccCccccCCCChhHHHHHHHHHHHHhCCccChhhhccCCCHHHHHHHHHHh
Q 033068 46 ANPDEIMHRVIALVKKFDKTDAHKVTETADFQKDLSLDSLDRVELVMAFEEEFSVEIPEEKADKLTCCADVARYIASE 123 (128)
Q Consensus 46 ~~~~~i~~~l~~ii~~~l~i~~~~i~~d~~l~~dlGlDSL~~veli~~LEe~fgI~i~~~el~~~~Tv~dl~~~I~~~ 123 (128)
....++...|.++++++++++ .+..+++| .++|.|||..++++..++++||++++..++....|++++++++...
T Consensus 6 ~p~~~~e~~l~~iw~~vL~~~--~i~~~d~f-f~lGgdSl~a~~l~~~~~~~~g~~l~~~~i~~~~ti~~la~~~~~~ 80 (520)
T 2jgp_A 6 APRSVWEARLAQVWEQVLNVP--QVGALDDF-FALGGHSLRAMRVLSSMHNEYQVDIPLRILFEKPTIQELAAFIEET 80 (520)
T ss_dssp CCCSHHHHHHHHHHHHHHTCS--CCCTTCBT-TTTTCCHHHHHHHHHHHHHHHCBCCCHHHHHHSCBHHHHHHHHHHC
T ss_pred CCCCHHHHHHHHHHHHHhCCC--CCCCCccH-HHhcccHHHHHHHHHHHHHHhCCCcCHHHHhcCCCHHHHHHHHHhh
Confidence 345578899999999999995 69999999 9999999999999999999999999999999999999999999764
No 45
>2fq1_A Isochorismatase; ENTB, NRPS, multi-domain, ACP, hydrolase; 2.30A {Escherichia coli}
Probab=98.53 E-value=1.3e-07 Score=73.53 Aligned_cols=66 Identities=11% Similarity=0.103 Sum_probs=62.6
Q ss_pred HHHHHHHHHhhCCCCCCCCCccCccccCCCChhHHHHHHHHHHHHhCCccChhhhccCCCHHHHHHHHH
Q 033068 53 HRVIALVKKFDKTDAHKVTETADFQKDLSLDSLDRVELVMAFEEEFSVEIPEEKADKLTCCADVARYIA 121 (128)
Q Consensus 53 ~~l~~ii~~~l~i~~~~i~~d~~l~~dlGlDSL~~veli~~LEe~fgI~i~~~el~~~~Tv~dl~~~I~ 121 (128)
+++++.+++.+ ++++++.++.+| .++|+||+.++.++..+++. |+++++.++....|++++.+++.
T Consensus 218 dwlr~~va~~L-~~~~~i~~~~nL-~~lGlDSi~~m~l~~~~~~~-g~~~~~~~l~~~ptl~~~~~~l~ 283 (287)
T 2fq1_A 218 AALREVILPLL-DESDEPFDDDNL-IDYGLDSVRMMALAARWRKV-HGDIDFVMLAKNPTIDAWWKLLS 283 (287)
T ss_dssp HHHHHHHGGGC-CCSSCCCTTSCS-GGGTCCTTHHHHHHHHHTTT-CTTCCHHHHHTSCSHHHHHHHHH
T ss_pred HHHHHHHHHHh-CCHhhcCCCCCH-HHhCccHHHHHHHHHHHHHc-CCCCCHHHHHhCccHHHHHHHHH
Confidence 46888999999 888899999999 99999999999999999998 99999999999999999999997
No 46
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}
Probab=98.22 E-value=1.8e-06 Score=78.43 Aligned_cols=76 Identities=12% Similarity=0.215 Sum_probs=69.4
Q ss_pred CChHHHHHHHHHHHHHhhCCCCCCCCCccCccccCCCChhHHHHHHHHHHHHhCCccChhhhccCCCHHHHHHHHHHhh
Q 033068 46 ANPDEIMHRVIALVKKFDKTDAHKVTETADFQKDLSLDSLDRVELVMAFEEEFSVEIPEEKADKLTCCADVARYIASEA 124 (128)
Q Consensus 46 ~~~~~i~~~l~~ii~~~l~i~~~~i~~d~~l~~dlGlDSL~~veli~~LEe~fgI~i~~~el~~~~Tv~dl~~~I~~~~ 124 (128)
....++++.+.++++++++++ .+..+++| .++|.|||..++++..|+++||++++..++....|+.++++++....
T Consensus 968 ~p~~~~e~~l~~~~~~vL~~~--~i~~~~~f-f~lGg~Sl~a~~l~~~l~~~~g~~l~~~~~~~~~ti~~la~~~~~~~ 1043 (1304)
T 2vsq_A 968 GPRNEMEETIAQIWSEVLGRK--QIGIHDDF-FALGGHALKAMTAASRIKKELGIDLPVKLLFEAPTIAGISAYLKNGG 1043 (1304)
T ss_dssp CCSSHHHHHHHHHHHHHHTCS--CCCTTCCT-TTTTCCHHHHHHHHHHSSSTTSCCCCSSCTTTCCSHHHHHHHHHHTT
T ss_pred CCCChHHHHHHHHHHHHcCCC--ccCCCCCH-HHhCCChHHHHHHHHHHHHHhCCCCCHHHHHhCCCHHHHHHHHHhcC
Confidence 445678899999999999984 58999999 89999999999999999999999999999999999999999997643
No 47
>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}
Probab=98.20 E-value=1.8e-07 Score=76.94 Aligned_cols=75 Identities=17% Similarity=0.278 Sum_probs=0.0
Q ss_pred CChHHHHHHHHHHHHHhhCCCCCCCCCccCccccCCCChhHHHHHHHHHHHHhCCccChhhhccCCCHHHHHHHHHHhh
Q 033068 46 ANPDEIMHRVIALVKKFDKTDAHKVTETADFQKDLSLDSLDRVELVMAFEEEFSVEIPEEKADKLTCCADVARYIASEA 124 (128)
Q Consensus 46 ~~~~~i~~~l~~ii~~~l~i~~~~i~~d~~l~~dlGlDSL~~veli~~LEe~fgI~i~~~el~~~~Tv~dl~~~I~~~~ 124 (128)
....+++..|.++++++++++ .+..+++| .++|.|||.+++++..|++ ||++++..++....|+++++++|.+..
T Consensus 41 ~p~~~~e~~l~~~w~~~l~~~--~i~~~~~f-f~lGg~Sl~a~~l~~~~~~-~~~~~~~~~~~~~~t~~~la~~~~~~~ 115 (508)
T 4f6l_B 41 EPSNEIEQTFVDVFGEVLKQN--DVGVDDDF-FELGGNSLEAMLVVSHLKR-FGHHISMQTLYQYKTVRQIVNYMYQNQ 115 (508)
T ss_dssp -------------------------------------------------------------------------------
T ss_pred CCCCHHHHHHHHHHHHHhCCC--CCCCCCCh-HHcCchHHHHHHHHHHHHH-cCCCccHHHHhcCCcHHHHHHHHHhhc
Confidence 345678899999999999986 69999999 8999999999999999986 999999999999999999999997653
No 48
>3rg2_A Enterobactin synthase component E (ENTE), 2,3-DIH dihydroxybenzoate synthetase, isochroismatase...; adenylate-forming enzymes, ANL superfamily; HET: SVS PNS; 3.10A {Escherichia coli}
Probab=98.19 E-value=1.9e-06 Score=72.32 Aligned_cols=71 Identities=11% Similarity=0.096 Sum_probs=61.0
Q ss_pred HHHHHHHHHHHhhCCCCCCCCCccCccccCCCChhHHHHHHHHHHHHhCCccChhhhccCCCHHHHHHHHHHhh
Q 033068 51 IMHRVIALVKKFDKTDAHKVTETADFQKDLSLDSLDRVELVMAFEEEFSVEIPEEKADKLTCCADVARYIASEA 124 (128)
Q Consensus 51 i~~~l~~ii~~~l~i~~~~i~~d~~l~~dlGlDSL~~veli~~LEe~fgI~i~~~el~~~~Tv~dl~~~I~~~~ 124 (128)
....+.+++.+.++. .+.+..+++| .++|.|||.+++++..|++ ++++++..++....|+.+++++|.+.+
T Consensus 546 ~~~~l~~~~~~~l~~-~~~~~~~d~F-f~lGgdSl~a~~l~~~l~~-~~~~~~~~~~~~~pti~~la~~l~~~~ 616 (617)
T 3rg2_A 546 SKAALREVILPLLDE-SDEPFDDDNL-IDYGLDSVRMMALAARWRK-VHGDIDFVMLAKNPTIDAWWKLLSREV 616 (617)
T ss_dssp SHHHHHHHHGGGSCT-TCCCCTTSCG-GGGTCCHHHHHHHHHHHHT-TSTTCCHHHHHHSCCHHHHHHHHCC--
T ss_pred cHHHHHHHHHHHhcc-CCCCCCCCCh-hhcCccHHHHHHHHHHHHH-hcCCCCHHHHhcCCCHHHHHHHHHhhc
Confidence 456788888888874 3468889999 9999999999999999997 788999999999999999999987654
No 49
>4dg8_A PA1221; ANL superfamily, adenylation domain, peptidyl carrier protei ribosomal peptide synthetase, NRPS, valine adenylation, LIG; HET: AMP; 2.15A {Pseudomonas aeruginosa} PDB: 4dg9_A*
Probab=98.06 E-value=3.3e-07 Score=77.53 Aligned_cols=75 Identities=13% Similarity=0.040 Sum_probs=0.0
Q ss_pred ChHHHHHHHHHHHHHhhCCCCCCCCCccCccccCCCChhHHHHHHHHHHH-HhCCccChhhhccCCCHHHHHHHHHHhh
Q 033068 47 NPDEIMHRVIALVKKFDKTDAHKVTETADFQKDLSLDSLDRVELVMAFEE-EFSVEIPEEKADKLTCCADVARYIASEA 124 (128)
Q Consensus 47 ~~~~i~~~l~~ii~~~l~i~~~~i~~d~~l~~dlGlDSL~~veli~~LEe-~fgI~i~~~el~~~~Tv~dl~~~I~~~~ 124 (128)
..+.....+.++++++++++ .+..+++| .++|.|||.+++++..|++ .||++++..++....|+.+++++|.+..
T Consensus 521 ~~~~~e~~l~~iw~~vL~~~--~~~~~d~F-f~lGGdSl~a~~l~~~l~~~~~~~~l~~~~~f~~pti~~la~~l~~~~ 596 (620)
T 4dg8_A 521 ALDPDQRGCAQLWSELLGCE--VGAADQDF-FLCGGNSLLALQLVALCQSAGAGANLGLADLQANSRLDQFSRLLRSHG 596 (620)
T ss_dssp -------------------------------------------------------------------------------
T ss_pred CCCHHHHHHHHHHHHHhCCC--CCCCCCCh-hhccCcHHHHHHHHHHHHhhCCCCCcCHHHHhcCCCHHHHHHHHHhcC
Confidence 34567788999999999985 47888999 9999999999999999999 8999999999999999999999998643
No 50
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=97.26 E-value=4.2e-05 Score=74.02 Aligned_cols=70 Identities=16% Similarity=0.205 Sum_probs=0.0
Q ss_pred HHHHHHHHHHhhCCC-CCCCCCccCccccCCCChhHHHHHHHHHHHHhCCccChhhhccCCCHHHHHHHHHHh
Q 033068 52 MHRVIALVKKFDKTD-AHKVTETADFQKDLSLDSLDRVELVMAFEEEFSVEIPEEKADKLTCCADVARYIASE 123 (128)
Q Consensus 52 ~~~l~~ii~~~l~i~-~~~i~~d~~l~~dlGlDSL~~veli~~LEe~fgI~i~~~el~~~~Tv~dl~~~I~~~ 123 (128)
.+.+.++++++++++ .++++++.+| .++|+|||..++|...|+++||++++..++.. .|+..+++++...
T Consensus 2125 ~~~l~~~~a~vL~~~~~~~i~~~~~~-~~lG~DSL~avelr~~i~~~~~~~l~~~~i~~-~t~~~la~~~~~~ 2195 (2512)
T 2vz8_A 2125 QKDLVKAVAHILGIRDVASINPDSTL-VDLGLDSLMGVEVRQILEREHDLVLSMREVRQ-LSLRKLQELSSKT 2195 (2512)
T ss_dssp -------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHhCCCcccccCCCCch-HHhCcchHHHHHHHHHHHHHhCCcccHHHHHh-hhHHHHHHHHhhc
Confidence 456889999999986 5789999999 99999999999999999999999999998866 6888888776543
No 51
>2px6_A Thioesterase domain; thioesaterse domain, orlistat, fatty acid synthase, drug complex, tetrahydrolipstatin, transferase; HET: DH9; 2.30A {Homo sapiens}
Probab=91.61 E-value=0.031 Score=42.41 Aligned_cols=37 Identities=3% Similarity=-0.248 Sum_probs=8.7
Q ss_pred CCChhHHHHHHHHHHHHhCCccChhhhccCCCHHHHH
Q 033068 81 SLDSLDRVELVMAFEEEFSVEIPEEKADKLTCCADVA 117 (128)
Q Consensus 81 GlDSL~~veli~~LEe~fgI~i~~~el~~~~Tv~dl~ 117 (128)
|.|||..++++..|+++||++++..++....|+..++
T Consensus 1 GGdSL~a~~l~~rl~~~~g~~l~~~~lf~~pt~~~l~ 37 (316)
T 2px6_A 1 GSHNLACPTPKEDGLAQQQTQLNLRSLLVNPEGPTLM 37 (316)
T ss_dssp -------------------------CCCCCTTSCSEE
T ss_pred CCchHHHHHHHHHHHHHHhhccchhhhhcCCCcCeeE
Confidence 7899999999999999999999999988887776543
No 52
>1v32_A AT5G08430, hypothetical protein RAFL09-47-K03; SWI/SNF complex subunit, structural genomics; NMR {Arabidopsis thaliana} SCOP: a.42.1.1
Probab=75.99 E-value=2.7 Score=27.74 Aligned_cols=69 Identities=10% Similarity=0.068 Sum_probs=54.5
Q ss_pred hHHHHHHHH---hcC--CCCChHHHHHHHHHHHHHh-hCC--CCCCCCCccCccccCCCChhHHHHHHHHHHHHhCC
Q 033068 32 VLKQLSRQM---CAS--TSANPDEIMHRVIALVKKF-DKT--DAHKVTETADFQKDLSLDSLDRVELVMAFEEEFSV 100 (128)
Q Consensus 32 ~~~~~~~~~---~~~--~~~~~~~i~~~l~~ii~~~-l~i--~~~~i~~d~~l~~dlGlDSL~~veli~~LEe~fgI 100 (128)
.|++|...+ -.. ..+++.++...|+++|.+. +.- +...|..|..|..-+|-|++.+.++...|..+|--
T Consensus 16 ~S~eLa~fl~~iG~~~~~~~sR~eVvk~lW~YIK~nnLQdp~~Kr~I~cD~kLk~lFg~~~v~~~~m~klL~~Hl~~ 92 (101)
T 1v32_A 16 GSRQLIEFLHSLGKDTSEMISRYDVSDTIAKYISKEGLLDPSNKKKVVCDKRLVLLFGTRTIFRMKVYDLLEKHYKE 92 (101)
T ss_dssp SCHHHHHHHHHHTCCCSSCCCHHHHHHHHHHHHHHHTCBCSSCTTEEECCSHHHHHTCCSEEETTHHHHHHHHHSCS
T ss_pred CCHHHHHHHHHcCCCCccccCHHHHHHHHHHHHHhhcCcCcccCCeeeccHHHHHHHCCCcccHHHHHHHHHHHcCc
Confidence 455566554 232 4599999999999999998 543 45568899999778899999999999999988854
No 53
>1v31_A Hypothetical protein RAFL11-05-P19; SWI/SNF complex subunit, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: a.42.1.1
Probab=75.94 E-value=0.86 Score=29.55 Aligned_cols=68 Identities=15% Similarity=0.099 Sum_probs=53.8
Q ss_pred hhHHHHHHHHhcCCCCChHHHHHHHHHHHHHh-hCC--CCCCCCCccCccccCCCChhHHHHHHHHHHHHhC
Q 033068 31 NVLKQLSRQMCASTSANPDEIMHRVIALVKKF-DKT--DAHKVTETADFQKDLSLDSLDRVELVMAFEEEFS 99 (128)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~i~~~l~~ii~~~-l~i--~~~~i~~d~~l~~dlGlDSL~~veli~~LEe~fg 99 (128)
..|++|.. +.....+++.++...|+++|... +.- +...|..|..|..-+|-|++.+.++...|..+|-
T Consensus 13 ~lS~~La~-~lG~~~~sr~evvk~lW~YIK~n~Lqdp~~k~~I~cD~~L~~lfg~~~v~~~~~~klL~~Hl~ 83 (93)
T 1v31_A 13 KLSTALMD-VLGIEVETRPRIIAAIWHYVKARKLQNPNDPSFFNCDAALQKVFGEEKLKFTMVSQKISHHLS 83 (93)
T ss_dssp ECCHHHHH-HSCCSEECSHHHHHHHHHHHHHTTCBCSSCSSEEECCSHHHHHSCSSEEETTTTHHHHHHHCB
T ss_pred ccCHHHHH-HHCCCccCHHHHHHHHHHHHHHccCcCcccCceeehhHHHHHHhCCCcccHHHHHHHHHHhcC
Confidence 45666664 44556799999999999999998 543 3445889999977889999999999999988774
No 54
>1dd4_C 50S ribosomal protein L7/L12; dimer formation, flexibility, hinge region, four-helix- bundle, five-helix- bundle, alpha-beta structure; HET: TBR; 2.40A {Thermotoga maritima} SCOP: a.108.1.1
Probab=73.96 E-value=3.4 Score=22.80 Aligned_cols=21 Identities=33% Similarity=0.493 Sum_probs=17.4
Q ss_pred CCChhHHHHHHHHHHHHhCCc
Q 033068 81 SLDSLDRVELVMAFEEEFSVE 101 (128)
Q Consensus 81 GlDSL~~veli~~LEe~fgI~ 101 (128)
++.=+...+|+..+|++|||.
T Consensus 12 ~lTvlE~~eLvk~leekfGVs 32 (40)
T 1dd4_C 12 KLTVSELAELVKKLEDKFGVT 32 (40)
T ss_dssp TSCHHHHHHHHHHHHHHTCCC
T ss_pred hCcHHHHHHHHHHHHHHHCCC
Confidence 344567789999999999996
No 55
>1uhr_A SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily...; structural genomics, chromatin remodeling; NMR {Mus musculus} SCOP: a.42.1.1
Probab=70.40 E-value=2.1 Score=27.68 Aligned_cols=66 Identities=9% Similarity=0.067 Sum_probs=52.2
Q ss_pred HHHHHHHHhcCCCCChHHHHHHHHHHHHHh-hCC--CCCCCCCccCccccCCCChhHHHHHHHHHHHHhC
Q 033068 33 LKQLSRQMCASTSANPDEIMHRVIALVKKF-DKT--DAHKVTETADFQKDLSLDSLDRVELVMAFEEEFS 99 (128)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~i~~~l~~ii~~~-l~i--~~~~i~~d~~l~~dlGlDSL~~veli~~LEe~fg 99 (128)
|++|. .+.....+++.++...++++|... +.- +...|..|..|..-+|-|++.+.++...|...|.
T Consensus 15 S~~La-~~lG~~~~sr~evvk~lW~YIK~n~Lqdp~~k~~I~cD~~Lk~lfg~~~v~~~~~~klL~~Hl~ 83 (93)
T 1uhr_A 15 DPRLA-RLLGIHTQTRPVIIQALWQYIKTHKLQDPHEREFVLCDKYLQQIFESQRMKFSEIPQRLHALLM 83 (93)
T ss_dssp CTTHH-HHTCCSEEEHHHHHHHHHHHHHHTTCBCSSCSSEECCCTTHHHHTCCSSEEGGGSHHHHHHHEE
T ss_pred CHHHH-HHHCCCccCHHHHHHHHHHHHHhccCCCccccceeechHHHHHHhCCCcccHHHHHHHHHHhcC
Confidence 34444 445566799999999999999998 543 3456899999977899999999999998888764
No 56
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*
Probab=69.41 E-value=0.96 Score=45.24 Aligned_cols=54 Identities=13% Similarity=0.147 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHhhCCCCCCCCCccCccccCCCChhHHHHHHHHHHHHhCCccCh
Q 033068 51 IMHRVIALVKKFDKTDAHKVTETADFQKDLSLDSLDRVELVMAFEEEFSVEIPE 104 (128)
Q Consensus 51 i~~~l~~ii~~~l~i~~~~i~~d~~l~~dlGlDSL~~veli~~LEe~fgI~i~~ 104 (128)
..+.++.+++..++.++++|.+++++.+..|.+|....||+..|+.+||..+|+
T Consensus 1795 a~~~~~~liA~~~k~~~~~i~~~~~i~~L~gg~St~~nell~dl~~efg~~~p~ 1848 (3089)
T 3zen_D 1795 AADATVALIALSAKMRIDQIEALDSIESITDGASSRRNQLLVDLGSELNLGAID 1848 (3089)
T ss_dssp ------------------------------------------------------
T ss_pred HHHHHHHHHHHHhCCChhHCCccccHHHHhCCchHHHHHHHHHHHHHhCCCCCC
Confidence 466788899999999999999999994444999999999999999999996653
No 57
>1zav_U 50S ribosomal protein L7/L12; ribosome structure and function, L10-L12 complex structure, L10E structure, L7/12 ribosomal stalk; 1.90A {Thermotoga maritima} SCOP: a.108.1.1 PDB: 1zaw_U 1zax_U 1dd3_C
Probab=60.51 E-value=7 Score=20.13 Aligned_cols=17 Identities=29% Similarity=0.464 Sum_probs=13.7
Q ss_pred ChhHHHHHHHHHHHHhC
Q 033068 83 DSLDRVELVMAFEEEFS 99 (128)
Q Consensus 83 DSL~~veli~~LEe~fg 99 (128)
.=+.+.+++..+|++||
T Consensus 14 TvlEl~eLvk~lEe~fG 30 (30)
T 1zav_U 14 TVSELAELVKKLEDKFG 30 (30)
T ss_dssp BHHHHHHHHHHHHHHTC
T ss_pred cHHHHHHHHHHHHHHhC
Confidence 34667889999999997
No 58
>3ufe_A Transcriptional antiterminator (BGLG family); extended helix bundle, arcimboldo; 1.50A {Bacillus subtilis} PDB: 3gwh_A
Probab=46.57 E-value=14 Score=23.16 Aligned_cols=21 Identities=14% Similarity=0.276 Sum_probs=18.1
Q ss_pred HHHHHHHHHHHhCCccChhhh
Q 033068 87 RVELVMAFEEEFSVEIPEEKA 107 (128)
Q Consensus 87 ~veli~~LEe~fgI~i~~~el 107 (128)
+..+...+++.||+++|++|+
T Consensus 79 a~~i~~~ie~~~~i~i~~~Ei 99 (111)
T 3ufe_A 79 AWKLIKILQQTLKKPVHEAEA 99 (111)
T ss_dssp HHHHHHHHHHHHCSCCCTHHH
T ss_pred HHHHHHHHHHHHCCCCCHHHH
Confidence 457788899999999999987
No 59
>3r9j_C MINE, cell division topological specificity factor; ATPase, protein complex, bacterial cell division inhibitor; HET: ADP; 4.30A {Escherichia coli} PDB: 1ev0_A
Probab=42.76 E-value=17 Score=22.66 Aligned_cols=35 Identities=14% Similarity=0.248 Sum_probs=27.0
Q ss_pred HHHhcCCCCChHHHHHHHHHHHHHhhCCCCCCCCC
Q 033068 38 RQMCASTSANPDEIMHRVIALVKKFDKTDAHKVTE 72 (128)
Q Consensus 38 ~~~~~~~~~~~~~i~~~l~~ii~~~l~i~~~~i~~ 72 (128)
.|-+..++-..+.+...|.++|+.+..++.+.++-
T Consensus 18 dR~~~~~pd~l~~lk~eIl~VIsKYv~Id~~~v~v 52 (77)
T 3r9j_C 18 RRRSDAEPHYLPQLRKDILEVICKYVQIDPEMVTV 52 (77)
T ss_dssp HHHHTTSCSSHHHHHHHHTTGGGTTSCCCCSCCCC
T ss_pred HhccCCCHHHHHHHHHHHHHHHHhheecCcccEEE
Confidence 34434566777899999999999999998776543
No 60
>1q1v_A DEK protein; winged-helix motif, DNA binding protein; NMR {Homo sapiens} SCOP: a.159.4.1
Probab=40.65 E-value=44 Score=20.26 Aligned_cols=42 Identities=12% Similarity=0.301 Sum_probs=29.8
Q ss_pred CChHHHHHHHHHHHHHhhCCCCCCCCCccCccccCCCChhHHHHHHHHHHHHh-CCccChh
Q 033068 46 ANPDEIMHRVIALVKKFDKTDAHKVTETADFQKDLSLDSLDRVELVMAFEEEF-SVEIPEE 105 (128)
Q Consensus 46 ~~~~~i~~~l~~ii~~~l~i~~~~i~~d~~l~~dlGlDSL~~veli~~LEe~f-gI~i~~~ 105 (128)
.+.+++...|.+++++. .++++..=.+...|++.| |+++...
T Consensus 12 Psd~ei~~~I~~IL~~a------------------DL~tvT~K~VR~~Le~~~pg~dLs~k 54 (70)
T 1q1v_A 12 PTDEELKETIKKLLASA------------------NLEEVTMKQICKKVYENYPTYDLTER 54 (70)
T ss_dssp CCHHHHHHHHHHHHTTS------------------CGGGCCHHHHHHHHHHHCSSSCCSHH
T ss_pred cCHHHHHHHHHHHHHhC------------------CHHHHhHHHHHHHHHHHccCCCChHH
Confidence 45666777777776542 244556677899999999 9998853
No 61
>2pls_A CBS domain protein; APC86064.2, CORC/HLYC transporter associated domain, CBS DOM protein, structural genomics, PSI-2 structure initiative; 2.15A {Chlorobium tepidum tls} SCOP: d.145.1.4
Probab=36.15 E-value=49 Score=20.16 Aligned_cols=34 Identities=12% Similarity=0.313 Sum_probs=22.1
Q ss_pred HHHHHHHhCCc-cChhhhccCCCHHHHHHHHHHhh
Q 033068 91 VMAFEEEFSVE-IPEEKADKLTCCADVARYIASEA 124 (128)
Q Consensus 91 i~~LEe~fgI~-i~~~el~~~~Tv~dl~~~I~~~~ 124 (128)
+..+.+.||++ +|.++-..+.|++.++-....+.
T Consensus 19 l~dl~~~l~~~~l~~~~~~~~~Tl~G~i~~~lg~i 53 (86)
T 2pls_A 19 VPELKDTLGLRAVPEEEKGVYHTLSGMIMWLLGRL 53 (86)
T ss_dssp HHHHHHHHTCSCCTTTTSCSCCBHHHHHHHHHTSC
T ss_pred HHHHHHHhCCCcCCCccCCCcccHHHHHHHHhCCC
Confidence 35678889998 88632235788888765444433
No 62
>1wyq_A Spectrin beta chain, brain 2; NPPSFA, structural genomics, riken structural genomics/proteomics initiative, RSGI, structural protein; NMR {Homo sapiens}
Probab=35.40 E-value=97 Score=20.56 Aligned_cols=13 Identities=15% Similarity=0.529 Sum_probs=10.4
Q ss_pred chHHHHHhhhhhc
Q 033068 3 NIKETILRYVRVR 15 (128)
Q Consensus 3 ~~~~~~~~~~~~~ 15 (128)
.+|++||+|++-.
T Consensus 7 s~k~~LL~W~q~~ 19 (127)
T 1wyq_A 7 GAKDALLLWCQMK 19 (127)
T ss_dssp CSTHHHHHHHHHH
T ss_pred CHHHHHHHHHHHH
Confidence 5789999998744
No 63
>1bkr_A Spectrin beta chain; filamentous actin-binding domain, cytoskeleton; 1.10A {Homo sapiens} SCOP: a.40.1.1 PDB: 1aa2_A
Probab=35.09 E-value=90 Score=20.08 Aligned_cols=14 Identities=14% Similarity=0.477 Sum_probs=11.2
Q ss_pred chHHHHHhhhhhcc
Q 033068 3 NIKETILRYVRVRG 16 (128)
Q Consensus 3 ~~~~~~~~~~~~~~ 16 (128)
.+|++||+|++-..
T Consensus 3 s~k~~LL~W~q~~~ 16 (109)
T 1bkr_A 3 SAKDALLLWCQMKT 16 (109)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHH
Confidence 57899999998553
No 64
>2bnk_A Early protein GP16.7; DNA-binding protein; 2.9A {Bacillus phage PHI29} SCOP: a.251.1.1 PDB: 2c5r_A 1zae_A
Probab=34.50 E-value=54 Score=19.59 Aligned_cols=31 Identities=23% Similarity=0.455 Sum_probs=24.7
Q ss_pred HHHHHhCCccChhhh-----ccCCCHHHHHHHHHHh
Q 033068 93 AFEEEFSVEIPEEKA-----DKLTCCADVARYIASE 123 (128)
Q Consensus 93 ~LEe~fgI~i~~~el-----~~~~Tv~dl~~~I~~~ 123 (128)
.+=++-||.||.+-+ ..+.|-.++.+||..+
T Consensus 14 DlYe~SnIrIP~DIIEdl~~~~L~te~EVmnYiEnq 49 (67)
T 2bnk_A 14 DLYEQSNIRIPSDIIEDLVNQRLQSEQEVLNYIETQ 49 (67)
T ss_dssp HHHHHTTCCCCHHHHHHHHTTCCCCSHHHHHHHHHH
T ss_pred HHHHHcCCcCcHHHHHHHHHHhhhhHHHHHHHHHhh
Confidence 344678999998744 6789999999999875
No 65
>2oai_A Hemolysin; PFAM03471, xylella fastidiosa temecula1, structur genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; HET: MLY; 1.80A {Xylella fastidiosa} SCOP: d.145.1.4 PDB: 2r8d_A*
Probab=34.10 E-value=41 Score=20.98 Aligned_cols=34 Identities=12% Similarity=0.225 Sum_probs=18.2
Q ss_pred HHHHHHHhCCccChhhhccCCCHHHHHHHHHHhh
Q 033068 91 VMAFEEEFSVEIPEEKADKLTCCADVARYIASEA 124 (128)
Q Consensus 91 i~~LEe~fgI~i~~~el~~~~Tv~dl~~~I~~~~ 124 (128)
+..+.+.||+++|.++-..+.|++.++-....+.
T Consensus 28 l~dl~~~l~~~l~~~~~~~~dTlgG~i~~~lg~i 61 (94)
T 2oai_A 28 IEELREVLGAELPDGEENNYHTLAGMCISYFGRI 61 (94)
T ss_dssp HHHHHHHHTC-------CCCSBHHHHHHHHHSSC
T ss_pred HHHHHHHhCCCCCcccCCCCccHHHHHHHHhCCC
Confidence 4567888999998632236788888765444333
No 66
>3llb_A Uncharacterized protein; protein PA3983, unknown function, structural genomics, PSI2, MCSG, protein structure initiative; 1.80A {Pseudomonas aeruginosa} SCOP: d.145.1.0
Probab=31.89 E-value=58 Score=19.73 Aligned_cols=31 Identities=19% Similarity=0.274 Sum_probs=21.1
Q ss_pred HHHHHHHhCCccChhhhccCCCHHHHHHHHHHhh
Q 033068 91 VMAFEEEFSVEIPEEKADKLTCCADVARYIASEA 124 (128)
Q Consensus 91 i~~LEe~fgI~i~~~el~~~~Tv~dl~~~I~~~~ 124 (128)
+..+.+.||+++|.+ .+.|++.++-..-.+.
T Consensus 19 l~dl~~~l~~~l~~~---~~~Tl~G~i~~~lg~i 49 (83)
T 3llb_A 19 VDAFNDFFGSEFSDE---EFDTVGGLVMSAFGHL 49 (83)
T ss_dssp HHHHHHHHCCCCCTT---TCSBHHHHHHHHHSSC
T ss_pred HHHHHHHhCCCCCCC---CCcCHHHHHHHHhCcC
Confidence 356788899999854 5678887765444333
No 67
>2kxo_A Cell division topological specificity factor; MINE, MIND-binding, to specificity, cell cycle; NMR {Neisseria gonorrhoeae}
Probab=30.93 E-value=49 Score=21.29 Aligned_cols=29 Identities=7% Similarity=0.197 Sum_probs=23.8
Q ss_pred CCCCChHHHHHHHHHHHHHhhCCCCCCCC
Q 033068 43 STSANPDEIMHRVIALVKKFDKTDAHKVT 71 (128)
Q Consensus 43 ~~~~~~~~i~~~l~~ii~~~l~i~~~~i~ 71 (128)
.++-..+.+.+.|.++|+.+..++.+.++
T Consensus 35 ~~pd~l~~lk~eIl~VIsKYv~Id~~~v~ 63 (95)
T 2kxo_A 35 QTPDYLPTLRKALMEVLSKYVNVSLDNIR 63 (95)
T ss_dssp CCCCSHHHHHHHHHHHHHHHSCCCTTSEE
T ss_pred CCHHHHHHHHHHHHHHHHHheecchhheE
Confidence 34566789999999999999999876554
No 68
>3rio_A PTSGHI operon antiterminator; twisted beta sheet, four helix bundle, transcriptional antitermination, transcription; 1.99A {Bacillus subtilis}
Probab=30.22 E-value=33 Score=24.03 Aligned_cols=21 Identities=19% Similarity=0.314 Sum_probs=18.2
Q ss_pred HHHHHHHHHHHhCCccChhhh
Q 033068 87 RVELVMAFEEEFSVEIPEEKA 107 (128)
Q Consensus 87 ~veli~~LEe~fgI~i~~~el 107 (128)
...++..|++.|++++|++|+
T Consensus 147 a~~~~~~Ie~~~~i~lpedEi 167 (180)
T 3rio_A 147 AKEVIDMINEKAGLCLPEGEI 167 (180)
T ss_dssp HHHHHHHHHHHHTSCCCTTHH
T ss_pred HHHHHHHHHHHHCCCCCHHHH
Confidence 357788899999999999987
No 69
>2rk5_A Putative hemolysin; structural genomics, PSI-2, MCSG, protein structure initiative, midwest center for structural genomics, membrane; 1.50A {Streptococcus mutans UA159} SCOP: d.145.1.4
Probab=29.84 E-value=59 Score=19.82 Aligned_cols=29 Identities=14% Similarity=0.192 Sum_probs=20.1
Q ss_pred HHHHHHHhCCccChhhhccCCCHHHHHHHHHH
Q 033068 91 VMAFEEEFSVEIPEEKADKLTCCADVARYIAS 122 (128)
Q Consensus 91 i~~LEe~fgI~i~~~el~~~~Tv~dl~~~I~~ 122 (128)
+..+.+.||+++|.+ .+.|++.++-....
T Consensus 18 l~dl~~~l~~~l~~~---~~dTl~G~v~~~lg 46 (87)
T 2rk5_A 18 LNDFNEYFETDLESD---NVDTIAGFYLTGVG 46 (87)
T ss_dssp HHHHHHHHTCCCCCT---TCCBHHHHHHHHHC
T ss_pred HHHHHHHhCCCCCCC---CcccHHHHHHHHhC
Confidence 356788899999864 46788877644333
No 70
>2pag_A Hypothetical protein; nysgx, target 10412I, novel fold, structural genomics, PSI-2 structure initiative; 1.60A {Pseudomonas syringae PV} SCOP: d.369.1.1
Probab=29.15 E-value=31 Score=23.25 Aligned_cols=18 Identities=22% Similarity=0.399 Sum_probs=16.0
Q ss_pred HHHHHHHHHHhCCccChh
Q 033068 88 VELVMAFEEEFSVEIPEE 105 (128)
Q Consensus 88 veli~~LEe~fgI~i~~~ 105 (128)
-+-+..+|+++|+++|.+
T Consensus 24 ~e~I~~~E~~Lgi~fP~d 41 (135)
T 2pag_A 24 EDQLVEIEEQLFINIPFV 41 (135)
T ss_dssp HHHHHHHHHHHTCCCCHH
T ss_pred HHHHHHHHHHHCCCCCHH
Confidence 577899999999999986
No 71
>2p3h_A Uncharacterized CBS domain-containing protein; structural genomics, CORC_HLYC, PFAM03471, putative transpor protein; 1.80A {Corynebacterium glutamicum} SCOP: d.145.1.4
Probab=28.40 E-value=63 Score=20.71 Aligned_cols=30 Identities=17% Similarity=0.176 Sum_probs=20.8
Q ss_pred HHHHHHHhCCccChhhhccCCCHHHHHHHHHHh
Q 033068 91 VMAFEEEFSVEIPEEKADKLTCCADVARYIASE 123 (128)
Q Consensus 91 i~~LEe~fgI~i~~~el~~~~Tv~dl~~~I~~~ 123 (128)
+..+++.||+++|.+ .+.|++.++-....+
T Consensus 22 l~dl~~~lg~~l~~e---~~dTlgGli~~~lg~ 51 (101)
T 2p3h_A 22 LDEVERAIGYELPEG---DYETISGLLFDHANA 51 (101)
T ss_dssp HHHHHHHHTSCCCCS---SCCBHHHHHHHHHCS
T ss_pred HHHHHHHhCCCCCCC---CCccHHHHHHHHhCC
Confidence 356788899999863 577888876544333
No 72
>3ded_A Probable hemolysin; structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG, membrane; HET: MSE; 2.14A {Chromobacterium violaceum} SCOP: d.145.1.4
Probab=26.98 E-value=86 Score=20.35 Aligned_cols=34 Identities=26% Similarity=0.405 Sum_probs=23.4
Q ss_pred HHHHHHHhCCc--cChhhhccCCCHHHHHHHHHHhh
Q 033068 91 VMAFEEEFSVE--IPEEKADKLTCCADVARYIASEA 124 (128)
Q Consensus 91 i~~LEe~fgI~--i~~~el~~~~Tv~dl~~~I~~~~ 124 (128)
+..+.+.||++ +|.++-..+.|++.++-....+.
T Consensus 45 l~dl~e~lg~~~~l~~~~~~~~dTlgGlil~~lg~i 80 (113)
T 3ded_A 45 LDRFREFFELEAPLPGEAGGNIHTLAGVMLYQLGRV 80 (113)
T ss_dssp HHHHHHHTTCCSCCTTGGGTCCCBHHHHHHHHHCSS
T ss_pred HHHHHHHhCCCccCCcccCCCCccHHHHHHHHhCCC
Confidence 45778899998 88643356789888765544433
No 73
>1nha_A TFIIF-alpha, transcription initiation factor IIF, alpha subunit; transcription factor, human general transcription factor TFIIF, RAP74; NMR {Homo sapiens} SCOP: a.4.5.30 PDB: 1onv_A
Probab=26.62 E-value=1.2e+02 Score=19.03 Aligned_cols=43 Identities=16% Similarity=0.371 Sum_probs=29.8
Q ss_pred HHHHhhhhhccCccccccccCCCCchhHHHHHHHHhcCCC-CChHHHHHHHHHHHHHh
Q 033068 6 ETILRYVRVRGFNETYWSYTGTGSRNVLKQLSRQMCASTS-ANPDEIMHRVIALVKKF 62 (128)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~l~~ii~~~ 62 (128)
|++-+||+ + .|-+ ..+|...|...+. +..++..+.+.+|+..+
T Consensus 22 e~VRryL~-r-kPmT------------T~dLl~KFK~r~~~~~~~e~v~~~a~ILKki 65 (82)
T 1nha_A 22 DAVRRYLT-R-KPMT------------TKDLLKKFQTKKTGLSSEQTVNVLAQILKRL 65 (82)
T ss_dssp HHHHHHHH-H-SCBC------------HHHHHHHTTSSCCSSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHH-h-CCcc------------HHHHHHHHHHhcccCCCHHHHHHHHHHHHHc
Confidence 56677777 3 5555 4566667777665 77788888888888765
No 74
>3lae_A UPF0053 protein HI0107; APC85784.2, conserved protein, haemophilus influenzae RD KW20, structural genomics, PSI-2; HET: MSE; 1.45A {Haemophilus influenzae} SCOP: d.145.1.4 PDB: 2o1r_A*
Probab=26.44 E-value=54 Score=19.77 Aligned_cols=26 Identities=12% Similarity=0.132 Sum_probs=18.6
Q ss_pred HHHHHHHhCCccChhhhccCCCHHHHHHH
Q 033068 91 VMAFEEEFSVEIPEEKADKLTCCADVARY 119 (128)
Q Consensus 91 i~~LEe~fgI~i~~~el~~~~Tv~dl~~~ 119 (128)
+..+++.||+++|.+ .+.|++.++-.
T Consensus 19 l~dl~~~l~~~l~~~---~~~Tl~G~i~~ 44 (81)
T 3lae_A 19 LRDLNKMFNWELDTE---DARTFNGLILE 44 (81)
T ss_dssp HHHHHHHHCCCCCCS---SCSBHHHHHHH
T ss_pred HHHHHHHhCCCCCCC---CCccHHHHHHH
Confidence 346788899999853 46788776543
No 75
>2pli_A Uncharacterized protein; CORC-associated region, MCSG, PSI2, structural genomics, Pro structure initiative; 1.70A {Neisseria meningitidis} SCOP: d.145.1.4
Probab=25.83 E-value=78 Score=19.47 Aligned_cols=30 Identities=10% Similarity=0.079 Sum_probs=20.8
Q ss_pred HHHHHHHhCCccChhhhccCCCHHHHHHHHHHh
Q 033068 91 VMAFEEEFSVEIPEEKADKLTCCADVARYIASE 123 (128)
Q Consensus 91 i~~LEe~fgI~i~~~el~~~~Tv~dl~~~I~~~ 123 (128)
+..+.+.||+++|.+ .+.|++.++-....+
T Consensus 28 l~dl~~~l~~~l~~~---~~dTlgG~i~~~lg~ 57 (91)
T 2pli_A 28 IEDINTFFGTEYSSE---EADTIGGLVIQELGH 57 (91)
T ss_dssp HHHHHHHHCCCCCCS---SCCBHHHHHHHHHSS
T ss_pred HHHHHHHhCCCCCCC---CCccHHHHHHHHhCC
Confidence 456788899999863 577888776544333
No 76
>2r2z_A Hemolysin; APC85144, enterococcus faecalis V583, STRU initiative, midwest center for structural genomics, MCSG; 1.20A {Enterococcus faecalis} SCOP: d.145.1.4
Probab=25.16 E-value=80 Score=19.39 Aligned_cols=30 Identities=13% Similarity=0.164 Sum_probs=20.8
Q ss_pred HHHHHHHhCCccChhhhccCCCHHHHHHHHHHh
Q 033068 91 VMAFEEEFSVEIPEEKADKLTCCADVARYIASE 123 (128)
Q Consensus 91 i~~LEe~fgI~i~~~el~~~~Tv~dl~~~I~~~ 123 (128)
+..+.+.||+++|.+ .+.|++.++-....+
T Consensus 26 l~dl~~~l~~~l~~~---~~~TlgG~i~~~lg~ 55 (93)
T 2r2z_A 26 IDEFNEVFETDLHMS---DVDTMAGYLITALGT 55 (93)
T ss_dssp HHHHHHHHTCCCCCT---TCCBHHHHHHHHHSS
T ss_pred HHHHHHHhCCCCCCC---CcccHHHHHHHHhCC
Confidence 456788899999864 477888876444333
No 77
>2p13_A CBS domain; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; 1.65A {Nitrosomonas europaea} SCOP: d.145.1.4
Probab=23.56 E-value=96 Score=18.96 Aligned_cols=32 Identities=6% Similarity=0.088 Sum_probs=21.1
Q ss_pred HHHHHHHhCCccChhhhccCCCHHHHHHHHHHh
Q 033068 91 VMAFEEEFSVEIPEEKADKLTCCADVARYIASE 123 (128)
Q Consensus 91 i~~LEe~fgI~i~~~el~~~~Tv~dl~~~I~~~ 123 (128)
+..+.+.||+++|.+ -..+.|++.++-....+
T Consensus 25 l~dl~~~l~~~l~~~-~~~~~TlgG~i~~~lg~ 56 (90)
T 2p13_A 25 IRKASNLLEHDLVDE-AERYSTLGGYLLWQFGY 56 (90)
T ss_dssp HHHHHHHHTSCCCCT-TCCCCBHHHHHHHHHSS
T ss_pred HHHHHHHHCCCCCCc-CCCCccHHHHHHHHhCC
Confidence 456788899999863 12577888776444333
No 78
>3m20_A 4-oxalocrotonate tautomerase, putative; DMPI, thermophIle, beta-alpha-beta, catalytic proline, isomerase; 2.37A {Archaeoglobus fulgidus}
Probab=23.54 E-value=89 Score=17.52 Aligned_cols=23 Identities=13% Similarity=0.270 Sum_probs=18.6
Q ss_pred hHHHHHHHHHHHHHhhCCCCCCC
Q 033068 48 PDEIMHRVIALVKKFDKTDAHKV 70 (128)
Q Consensus 48 ~~~i~~~l~~ii~~~l~i~~~~i 70 (128)
+..+.+.|.+.+.+.+|++++.+
T Consensus 15 K~~L~~~it~~~~~~lg~~~~~v 37 (62)
T 3m20_A 15 KREFVERLTSVAAEIYGMDRSAI 37 (62)
T ss_dssp HHHHHHHHHHHHHHHHTCCTTSC
T ss_pred HHHHHHHHHHHHHHHhCcCcceE
Confidence 45678889999999999987664
No 79
>3fwu_A Macrophage migration inhibitory factor-like protein; homotrimer, tautomerase, cytokine; 1.80A {Leishmania major}
Probab=23.09 E-value=13 Score=25.12 Aligned_cols=60 Identities=13% Similarity=0.141 Sum_probs=35.3
Q ss_pred hhhhhccCccccccccCCCCchhHHHHHHHHhcCCCCChHHHHHHHHHHHHHhhCCCCCCC
Q 033068 10 RYVRVRGFNETYWSYTGTGSRNVLKQLSRQMCASTSANPDEIMHRVIALVKKFDKTDAHKV 70 (128)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ii~~~l~i~~~~i 70 (128)
.|+-|.+-+...+.|+++....+.-++. ..-...+....++...|.+.+.+.+|++++.+
T Consensus 57 ~~vmV~~~~~~~m~fgGs~dP~a~v~i~-sig~~~~e~n~~~s~~i~~~l~~~LgI~~~ri 116 (133)
T 3fwu_A 57 DLVMMTFHDSTPMHFFGSTDPVACVRVE-ALGGYGPSEPEKVTSIVTAAITKECGIVADRI 116 (133)
T ss_dssp GGCEEEEECSCCCCBTTBCSSCEEEEEE-CTTCCCTTHHHHHHHHHHHHHHHHHCCCGGGE
T ss_pred cEEEEEEECCceEEECCcCCCEEEEEEE-EcCCCCHHHHHHHHHHHHHHHHHHhCcChhhE
Confidence 3777777777666777664221111111 01111123345788899999999999987664
No 80
>2p4p_A Hypothetical protein HD1797; CORC_HLYC, PFAM: PF03471, structural GE PSI-2, protein structure initiative, midwest center for STR genomics; HET: MLY MSE; 1.80A {Haemophilus ducreyi} SCOP: d.145.1.4
Probab=22.83 E-value=90 Score=18.91 Aligned_cols=30 Identities=7% Similarity=0.281 Sum_probs=19.7
Q ss_pred HHHHHHHhCCc-cChhhhccCCCHHHHHHHHHH
Q 033068 91 VMAFEEEFSVE-IPEEKADKLTCCADVARYIAS 122 (128)
Q Consensus 91 i~~LEe~fgI~-i~~~el~~~~Tv~dl~~~I~~ 122 (128)
+..+.+.||++ +|.+ ..+.|++.++-....
T Consensus 19 l~dl~~~l~~~~l~~~--~~~~Tl~G~i~~~lg 49 (86)
T 2p4p_A 19 LEDVMRALNIHTFPRD--ENYETIGGFMMYMLR 49 (86)
T ss_dssp HHHHHHHTTCCCSCCS--CSSCBHHHHHHHHHC
T ss_pred HHHHHHHhCCCCCCcC--CCCccHHHHHHHHhC
Confidence 35678889996 8753 256788877644433
No 81
>2opa_A Probable tautomerase YWHB; homohexamer, 4-oxalocrotonate tautomerase, inhibitor, 2-FLUO hydroxycinnamate, isomerase; HET: FHC; 2.40A {Bacillus subtilis} PDB: 2op8_A*
Probab=22.54 E-value=81 Score=17.18 Aligned_cols=23 Identities=17% Similarity=0.312 Sum_probs=17.8
Q ss_pred hHHHHHHHHHHHHHhhCCCCCCC
Q 033068 48 PDEIMHRVIALVKKFDKTDAHKV 70 (128)
Q Consensus 48 ~~~i~~~l~~ii~~~l~i~~~~i 70 (128)
+..+.+.|.+.+.+.+|++++.+
T Consensus 16 k~~l~~~i~~~l~~~lg~~~~~v 38 (61)
T 2opa_A 16 KRNLVEKVTEAVKETTGASEEKI 38 (61)
T ss_dssp HHHHHHHHHHHHHHHHCCCGGGC
T ss_pred HHHHHHHHHHHHHHHhCcCcCeE
Confidence 34678888899999999877543
No 82
>1otf_A 4-oxalocrotonate tautomerase; isomerase; 1.90A {Pseudomonas SP} SCOP: d.80.1.1 PDB: 4otc_A 4ota_A 4otb_A 1bjp_A 2fm7_A
Probab=22.46 E-value=81 Score=17.19 Aligned_cols=23 Identities=9% Similarity=0.157 Sum_probs=17.8
Q ss_pred hHHHHHHHHHHHHHhhCCCCCCC
Q 033068 48 PDEIMHRVIALVKKFDKTDAHKV 70 (128)
Q Consensus 48 ~~~i~~~l~~ii~~~l~i~~~~i 70 (128)
+..+.+.|.+.+.+.+|++++.+
T Consensus 16 k~~l~~~i~~~l~~~lg~p~~~v 38 (62)
T 1otf_A 16 KETLIRQVSEAMANSLDAPLERV 38 (62)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGC
T ss_pred HHHHHHHHHHHHHHHhCcCcccE
Confidence 34678888899999999887543
No 83
>3abf_A 4-oxalocrotonate tautomerase; isomerase; 1.94A {Thermus thermophilus}
Probab=21.25 E-value=76 Score=17.49 Aligned_cols=23 Identities=13% Similarity=0.265 Sum_probs=18.1
Q ss_pred hHHHHHHHHHHHHHhhCCCCCCC
Q 033068 48 PDEIMHRVIALVKKFDKTDAHKV 70 (128)
Q Consensus 48 ~~~i~~~l~~ii~~~l~i~~~~i 70 (128)
+.++.+.|.+.+.+.+|++++.+
T Consensus 17 k~~l~~~lt~~l~~~lg~~~~~v 39 (64)
T 3abf_A 17 KRELVRRLTEMASRLLGEPYEEV 39 (64)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGE
T ss_pred HHHHHHHHHHHHHHHhCCCcccE
Confidence 34688899999999999876543
No 84
>2hfk_A Pikromycin, type I polyketide synthase pikaiv; alpha/beta hydrolase, thioesterase; HET: E4H; 1.79A {Streptomyces venezuelae} PDB: 2h7x_A* 2h7y_A* 2hfj_A* 1mna_A 1mn6_A 1mnq_A
Probab=21.11 E-value=6.2 Score=29.45 Aligned_cols=41 Identities=22% Similarity=0.282 Sum_probs=27.8
Q ss_pred CChHHHHHHHHHHHHHhhCCCCCCCCCccCccccCCCChhHHHHHHHHHHHHhC
Q 033068 46 ANPDEIMHRVIALVKKFDKTDAHKVTETADFQKDLSLDSLDRVELVMAFEEEFS 99 (128)
Q Consensus 46 ~~~~~i~~~l~~ii~~~l~i~~~~i~~d~~l~~dlGlDSL~~veli~~LEe~fg 99 (128)
..+.++++.|.++++++++++. +++| .+| +.++..|++.|.
T Consensus 24 ~P~~~~E~~la~iw~~vL~~~~-----~d~F-f~l-------~~l~~~~~~~f~ 64 (319)
T 2hfk_A 24 ADTGAGAGMFRALFRQAVEDDR-----YGEF-LDV-------LAEASAFRPQFA 64 (319)
T ss_dssp ------CCHHHHHHHHHHHTTC-----HHHH-HHH-------HHHHHTTSCEEC
T ss_pred CCCCchHHHHHHHHHHHHcCCc-----hHHH-HHH-------HHHHHHHHHhcC
Confidence 4556778899999999999865 7777 444 888888877654
No 85
>2eo2_A Adult MALE hypothalamus cDNA, riken FULL-length enriched library, clone:A230045M11...; FTHFSDC1, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=20.66 E-value=1.3e+02 Score=18.45 Aligned_cols=38 Identities=13% Similarity=0.128 Sum_probs=23.9
Q ss_pred CCchhHHHHHHHHhcC-------CCCChHHHHHHHHHHHHHhhCCCCCCCC
Q 033068 28 GSRNVLKQLSRQMCAS-------TSANPDEIMHRVIALVKKFDKTDAHKVT 71 (128)
Q Consensus 28 ~~~~~~~~~~~~~~~~-------~~~~~~~i~~~l~~ii~~~l~i~~~~i~ 71 (128)
|.+.+++-..+|+... ..++.+++....+ +++|++.|+
T Consensus 25 G~R~Fs~iql~RL~kLGI~ktdP~~LT~eEi~~FaR------LdIDP~TIT 69 (71)
T 2eo2_A 25 GVREFSEIQLSRLKKLGIHKTDPSTLTEEEVRKFAR------LNIDPATIT 69 (71)
T ss_dssp SSCCCCHHHHHHHHHHTCCCCSTTTCCHHHHHHHHH------TCCCSTTCC
T ss_pred CeeecCHHHHHHHHHcCCCCCCcccCCHHHHhhcee------cccCcccee
Confidence 6677777777766554 2367776655432 677776654
No 86
>2x4k_A 4-oxalocrotonate tautomerase; isomerase; 1.10A {Staphylococcus aureus}
Probab=20.28 E-value=96 Score=16.72 Aligned_cols=23 Identities=13% Similarity=0.228 Sum_probs=18.1
Q ss_pred hHHHHHHHHHHHHHhhCCCCCCC
Q 033068 48 PDEIMHRVIALVKKFDKTDAHKV 70 (128)
Q Consensus 48 ~~~i~~~l~~ii~~~l~i~~~~i 70 (128)
+..+.+.+.+.+.+.+|++++.+
T Consensus 19 k~~l~~~l~~~l~~~lg~p~~~v 41 (63)
T 2x4k_A 19 LKNLVSEVTDAVEKTTGANRQAI 41 (63)
T ss_dssp HHHHHHHHHHHHHHHHCCCGGGC
T ss_pred HHHHHHHHHHHHHHHhCcCcccE
Confidence 34678889999999999987544
Done!