BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033069
(128 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q91VC0|DCTP1_RAT dCTP pyrophosphatase 1 OS=Rattus norvegicus GN=Dctpp1 PE=2 SV=1
Length = 170
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 54/101 (53%), Positives = 75/101 (74%)
Query: 12 SLDLLRQKMADFAKERDWDKFHSPRNLLLALVGEVGELSEIFQWKGEVPKGLPDWKEEEK 71
+L+ +R+ A+FA ERDW++FH PRNLLLALVGEVGEL+E+FQWK + G W+ +E+
Sbjct: 30 TLEDIRRLHAEFAAERDWEQFHQPRNLLLALVGEVGELAELFQWKSDAEPGPQAWQPKER 89
Query: 72 IHLGEELSDVLLYLVRLSDICGIDLGKAALRKVELNAIKYP 112
L EELSDVL+YLV L+ C +DL +A + K++ N +YP
Sbjct: 90 AALQEELSDVLIYLVALAARCHVDLPRAVISKMDTNRQRYP 130
>sp|Q9QY93|DCTP1_MOUSE dCTP pyrophosphatase 1 OS=Mus musculus GN=Dctpp1 PE=1 SV=1
Length = 170
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 57/112 (50%), Positives = 79/112 (70%), Gaps = 1/112 (0%)
Query: 12 SLDLLRQKMADFAKERDWDKFHSPRNLLLALVGEVGELSEIFQWKGEVPKGLPDWKEEEK 71
+L+ +R+ A+FA ERDW++FH PRNLLLALVGEVGEL+E+FQWK + G W +E+
Sbjct: 30 TLEDIRRLHAEFAAERDWEQFHQPRNLLLALVGEVGELAELFQWKSDTEPGPQAWPPKER 89
Query: 72 IHLGEELSDVLLYLVRLSDICGIDLGKAALRKVELNAIKYPATACTNGSSNK 123
L EELSDVL+YLV L+ C +DL +A + K++ N +YP + GS+ K
Sbjct: 90 AALQEELSDVLIYLVALAARCHVDLPQAVISKMDTNRQRYP-VHLSRGSACK 140
>sp|Q9H773|DCTP1_HUMAN dCTP pyrophosphatase 1 OS=Homo sapiens GN=DCTPP1 PE=1 SV=1
Length = 170
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 78/117 (66%)
Query: 12 SLDLLRQKMADFAKERDWDKFHSPRNLLLALVGEVGELSEIFQWKGEVPKGLPDWKEEEK 71
+L+ +R+ A+FA ERDW++FH PRNLLLALVGEVGEL+E+FQWK + G W E+
Sbjct: 30 TLEDIRRLHAEFAAERDWEQFHQPRNLLLALVGEVGELAELFQWKTDGEPGPQGWSPRER 89
Query: 72 IHLGEELSDVLLYLVRLSDICGIDLGKAALRKVELNAIKYPATACTNGSSNKQPTPN 128
L EELSDVL+YLV L+ C +DL A L K+++N +YPA + S P+
Sbjct: 90 AALQEELSDVLIYLVALAARCRVDLPLAVLSKMDINRRRYPAHLARSSSRKYTELPH 146
>sp|Q32KY6|DCTP1_BOVIN dCTP pyrophosphatase 1 OS=Bos taurus GN=DCTPP1 PE=2 SV=1
Length = 169
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 54/101 (53%), Positives = 73/101 (72%)
Query: 12 SLDLLRQKMADFAKERDWDKFHSPRNLLLALVGEVGELSEIFQWKGEVPKGLPDWKEEEK 71
+L+ +R+ A+FA ERDW++FH PRNLLLALVGEVGEL+E+FQWK + G W E+
Sbjct: 29 TLEDIRRLHAEFAAERDWEQFHQPRNLLLALVGEVGELAELFQWKPDEEPGPQAWSPRER 88
Query: 72 IHLGEELSDVLLYLVRLSDICGIDLGKAALRKVELNAIKYP 112
L EELSD+L+YLV L+ C +DL +A L K++ N +YP
Sbjct: 89 AALQEELSDILIYLVALAARCRVDLPQAVLCKMDTNRRRYP 129
>sp|O32263|YVDC_BACSU Uncharacterized protein YvdC OS=Bacillus subtilis (strain 168)
GN=yvdC PE=4 SV=1
Length = 106
Score = 33.1 bits (74), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 6/81 (7%)
Query: 20 MADFAKERDWDKFHSPRNLLLALVGEVGELSEIFQWKGEVPKGLPDWKE----EEKIHLG 75
M +F ++R W ++ P + L+ E GEL+ + E+ + PD KE E+K L
Sbjct: 10 MKEFYEKRGWTEY-GPFIRVGFLMEEAGELARAVR-AYEIGRDRPDEKESSRAEQKQELI 67
Query: 76 EELSDVLLYLVRLSDICGIDL 96
EE+ DV+ + L+D+ G+ L
Sbjct: 68 EEMGDVIGNIAILADMYGVSL 88
>sp|P42979|YPJD_BACSU Uncharacterized protein YpjD OS=Bacillus subtilis (strain 168)
GN=ypjD PE=1 SV=1
Length = 111
Score = 32.3 bits (72), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
Query: 32 FHSPRNLLLALVGEVGELS-EIFQWKGEVPKGLPDWKEEEKIHLGEELSDVLLYLVRLSD 90
+ SP ++ L E+GEL+ E+ GE PK E+ + EE+ DVL LV L++
Sbjct: 24 YFSPLAMMARLTEELGELAREVNHRYGEKPKKAT----EDDKSMEEEIGDVLFVLVCLAN 79
Query: 91 ICGIDLGKAALR 102
I L +A R
Sbjct: 80 SLDISLEEAHDR 91
>sp|Q54RA4|Y3291_DICDI Probable iron/ascorbate oxidoreductase DDB_G0283291
OS=Dictyostelium discoideum GN=DDB_G0283291 PE=3 SV=1
Length = 363
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 53 FQWKGEVPKGLPDWKEEEKIHLGEELSDVLLYLVRLSDICGIDLGKAALRKVELNAIKYP 112
F GE+ GL DWK E ++LG EL+D ++ + + G++L ++E + + +
Sbjct: 94 FVVGGELTSGLKDWK--EGLYLGTELNDDHPLVIAQTPLHGLNLFPTLEEEIEYDIVGFK 151
Query: 113 ATACT 117
T T
Sbjct: 152 DTILT 156
>sp|P15287|AGSA_APLCA Adenosine deaminase AGSA OS=Aplysia californica PE=1 SV=2
Length = 525
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 23/40 (57%)
Query: 84 YLVRLSDICGIDLGKAALRKVELNAIKYPATACTNGSSNK 123
+ V L D+CG D L+++ LN+I+Y A + T + K
Sbjct: 460 FYVALMDLCGRDTALTFLKQLALNSIRYSAMSDTEKVAAK 499
>sp|Q1AX26|SYS_RUBXD Serine--tRNA ligase OS=Rubrobacter xylanophilus (strain DSM 9941 /
NBRC 16129) GN=serS PE=3 SV=1
Length = 424
Score = 30.8 bits (68), Expect = 2.5, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 23/40 (57%)
Query: 69 EEKIHLGEELSDVLLYLVRLSDICGIDLGKAALRKVELNA 108
EE + + EE+ L R+ DIC DLG AA RK ++ A
Sbjct: 298 EEMLSIEEEIFRTLEIPYRVVDICTGDLGAAAYRKYDVEA 337
>sp|Q5BJD5|TM41B_HUMAN Transmembrane protein 41B OS=Homo sapiens GN=TMEM41B PE=1 SV=1
Length = 291
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Query: 2 TTGVGDGESVSLDLLRQKMADFAKERDWDKFHSPRNLLLALVGEVGELSEIFQWKGEVPK 61
TT VGDG + + L D KE+ W + S R LL LV LS F V K
Sbjct: 17 TTPVGDGAAGTRGLAAPGSRDHQKEKSWVEAGSARMSLLILVSIF--LSAAFV-MFLVYK 73
Query: 62 GLPDWKEEEKIHL 74
P EEE++++
Sbjct: 74 NFPQLSEEERVNM 86
>sp|Q76G15|RMTB_SERMA 16S rRNA (guanine(1405)-N(7))-methyltransferase OS=Serratia
marcescens GN=rmtB PE=1 SV=1
Length = 251
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 22/32 (68%)
Query: 23 FAKERDWDKFHSPRNLLLALVGEVGELSEIFQ 54
FA+E+DWD + +++L A E G+L+ IF+
Sbjct: 143 FAREKDWDFTFALQDVLCAPPAEAGDLALIFK 174
>sp|Q5RBZ8|TM41B_PONAB Transmembrane protein 41B OS=Pongo abelii GN=TMEM41B PE=2 SV=1
Length = 291
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Query: 2 TTGVGDGESVSLDLLRQKMADFAKERDWDKFHSPRNLLLALVGEVGELSEIFQWKGEVPK 61
TT VGDG + + D+ KE+ W + S R LL LV LS F V K
Sbjct: 17 TTPVGDGAAGTRGPAAPGSRDYQKEKSWAEAGSARMSLLILVSIF--LSAAFV-MFLVYK 73
Query: 62 GLPDWKEEEKIHL 74
P EEE++++
Sbjct: 74 NFPQLSEEERVNM 86
>sp|Q7VZ77|CYSG_BORPE Siroheme synthase OS=Bordetella pertussis (strain Tohama I / ATCC
BAA-589 / NCTC 13251) GN=cysG PE=3 SV=1
Length = 473
Score = 29.3 bits (64), Expect = 7.4, Method: Composition-based stats.
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 40 LALVGEVGELSEIFQWKGEVPKGLP 64
L ++GEV L++ QW G+ +GLP
Sbjct: 442 LLVIGEVAALADTLQWFGQHQRGLP 466
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.135 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,180,953
Number of Sequences: 539616
Number of extensions: 1965939
Number of successful extensions: 3718
Number of sequences better than 100.0: 19
Number of HSP's better than 100.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 3707
Number of HSP's gapped (non-prelim): 19
length of query: 128
length of database: 191,569,459
effective HSP length: 94
effective length of query: 34
effective length of database: 140,845,555
effective search space: 4788748870
effective search space used: 4788748870
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 55 (25.8 bits)