BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033071
(128 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3IFQ|A Chain A, Interction Of Plakoglobin And Beta-Catenin With Desmosomal
Cadherins
pdb|3IFQ|B Chain B, Interction Of Plakoglobin And Beta-Catenin With Desmosomal
Cadherins
Length = 553
Score = 32.7 bits (73), Expect = 0.053, Method: Composition-based stats.
Identities = 26/89 (29%), Positives = 37/89 (41%), Gaps = 4/89 (4%)
Query: 31 QNSTDEERKEKIVAN----LANFAYDPYNYTFLRQLNVLELFLDCITEPNEKLVEFGVGG 86
Q TD R E+IV L A DP N + +LN + LF+ + E + G
Sbjct: 425 QPYTDGVRMEEIVEGCTGALHILARDPMNRMEIFRLNTIPLFVQLLYSSVENIQRVAAGV 484
Query: 87 ICNASVDPANAAIITKSGGIPLIIECLSS 115
+C + D A I G ++E L S
Sbjct: 485 LCELAQDKEAADAIDAEGASAPLMELLHS 513
Score = 28.1 bits (61), Expect = 1.2, Method: Composition-based stats.
Identities = 12/22 (54%), Positives = 16/22 (72%)
Query: 100 ITKSGGIPLIIECLSSPVRNTV 121
I KSGGIP ++ LSSPV + +
Sbjct: 99 IFKSGGIPALVRMLSSPVESVL 120
Score = 26.2 bits (56), Expect = 4.7, Method: Composition-based stats.
Identities = 15/43 (34%), Positives = 22/43 (51%)
Query: 77 EKLVEFGVGGICNASVDPANAAIITKSGGIPLIIECLSSPVRN 119
E++VE G + + DP N I + IPL ++ L S V N
Sbjct: 434 EEIVEGCTGALHILARDPMNRMEIFRLNTIPLFVQLLYSSVEN 476
>pdb|3L6X|A Chain A, Crystal Structure Of P120 Catenin In Complex With
E-Cadherin
pdb|3L6Y|A Chain A, Crystal Structure Of P120 Catenin In Complex With
E-cadherin
pdb|3L6Y|C Chain C, Crystal Structure Of P120 Catenin In Complex With
E-cadherin
pdb|3L6Y|E Chain E, Crystal Structure Of P120 Catenin In Complex With
E-cadherin
Length = 584
Score = 32.7 bits (73), Expect = 0.054, Method: Composition-based stats.
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Query: 49 FAYDPYNYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNASVDPANAAIITKSGGIPL 108
+ Y Y + LRQ L D +T +E++V+ G + N +VD N +I K IP
Sbjct: 341 WTYGRYIRSALRQEKALSAIADLLTNEHERVVKAASGALRNLAVDARNKELIGKH-AIPN 399
Query: 109 IIECLSSPVRNT 120
+++ L +N+
Sbjct: 400 LVKNLPGGQQNS 411
>pdb|3BCT|A Chain A, The Armadillo Repeat Region From Murine Beta-Catenin
Length = 470
Score = 31.2 bits (69), Expect = 0.17, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 36/89 (40%), Gaps = 8/89 (8%)
Query: 5 NQRQEERTGRSGTPRLQYLQELVSQFQNSTDEERKEKIVANLANFAYDPYNYTFLRQLNV 64
+Q + RT GT Q+ V + EE E L A D +N +R LN
Sbjct: 352 HQDTQRRTSMGGTQ-----QQFVEGVRX---EEIVEGCTGALHILARDVHNRIVIRGLNT 403
Query: 65 LELFLDCITEPNEKLVEFGVGGICNASVD 93
+ LF+ + P E + G +C + D
Sbjct: 404 IPLFVQLLYSPIENIQRVAAGVLCELAQD 432
Score = 26.9 bits (58), Expect = 3.0, Method: Composition-based stats.
Identities = 14/42 (33%), Positives = 25/42 (59%)
Query: 79 LVEFGVGGICNASVDPANAAIITKSGGIPLIIECLSSPVRNT 120
L++ VG I N ++ PAN A + + G IP +++ L ++T
Sbjct: 314 LIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQDT 355
Score = 26.6 bits (57), Expect = 3.7, Method: Composition-based stats.
Identities = 11/18 (61%), Positives = 14/18 (77%)
Query: 100 ITKSGGIPLIIECLSSPV 117
I KSGGIP +++ L SPV
Sbjct: 39 IFKSGGIPALVKXLGSPV 56
Score = 26.2 bits (56), Expect = 4.7, Method: Composition-based stats.
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 77 EKLVEFGVGGICNASVDPANAAIITKSGGIPLIIECLSSPVRN 119
E++VE G + + D N +I IPL ++ L SP+ N
Sbjct: 375 EEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSPIEN 417
>pdb|2Z6H|A Chain A, Crystal Structure Of Beta-Catenin Armadillo Repeat Region
And Its C-Terminal Domain
Length = 644
Score = 31.2 bits (69), Expect = 0.18, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 36/89 (40%), Gaps = 8/89 (8%)
Query: 5 NQRQEERTGRSGTPRLQYLQELVSQFQNSTDEERKEKIVANLANFAYDPYNYTFLRQLNV 64
+Q + RT GT Q+ V + EE E L A D +N +R LN
Sbjct: 407 HQDTQRRTSMGGTQ-----QQFVEGVRM---EEIVEGCTGALHILARDVHNRIVIRGLNT 458
Query: 65 LELFLDCITEPNEKLVEFGVGGICNASVD 93
+ LF+ + P E + G +C + D
Sbjct: 459 IPLFVQLLYSPIENIQRVAAGVLCELAQD 487
Score = 27.3 bits (59), Expect = 2.6, Method: Composition-based stats.
Identities = 14/42 (33%), Positives = 25/42 (59%)
Query: 79 LVEFGVGGICNASVDPANAAIITKSGGIPLIIECLSSPVRNT 120
L++ VG I N ++ PAN A + + G IP +++ L ++T
Sbjct: 369 LIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQDT 410
Score = 26.9 bits (58), Expect = 3.0, Method: Composition-based stats.
Identities = 11/18 (61%), Positives = 14/18 (77%)
Query: 100 ITKSGGIPLIIECLSSPV 117
I KSGGIP +++ L SPV
Sbjct: 94 IFKSGGIPALVKMLGSPV 111
Score = 26.6 bits (57), Expect = 4.1, Method: Composition-based stats.
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 77 EKLVEFGVGGICNASVDPANAAIITKSGGIPLIIECLSSPVRN 119
E++VE G + + D N +I IPL ++ L SP+ N
Sbjct: 430 EEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSPIEN 472
>pdb|2Z6G|A Chain A, Crystal Structure Of A Full-Length Zebrafish Beta-Catenin
Length = 780
Score = 31.2 bits (69), Expect = 0.18, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 36/89 (40%), Gaps = 8/89 (8%)
Query: 5 NQRQEERTGRSGTPRLQYLQELVSQFQNSTDEERKEKIVANLANFAYDPYNYTFLRQLNV 64
+Q + RT GT Q+ V + EE E L A D +N +R LN
Sbjct: 543 HQDTQRRTSMGGTQ-----QQFVEGVRM---EEIVEACTGALHILARDIHNRIVIRGLNT 594
Query: 65 LELFLDCITEPNEKLVEFGVGGICNASVD 93
+ LF+ + P E + G +C + D
Sbjct: 595 IPLFVQLLYSPIENIQRVAAGVLCELAQD 623
Score = 26.9 bits (58), Expect = 2.9, Method: Composition-based stats.
Identities = 14/42 (33%), Positives = 25/42 (59%)
Query: 79 LVEFGVGGICNASVDPANAAIITKSGGIPLIIECLSSPVRNT 120
L++ VG I N ++ PAN A + + G IP +++ L ++T
Sbjct: 505 LIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQDT 546
Score = 26.6 bits (57), Expect = 3.9, Method: Composition-based stats.
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 77 EKLVEFGVGGICNASVDPANAAIITKSGGIPLIIECLSSPVRN 119
E++VE G + + D N +I IPL ++ L SP+ N
Sbjct: 566 EEIVEACTGALHILARDIHNRIVIRGLNTIPLFVQLLYSPIEN 608
Score = 26.2 bits (56), Expect = 4.6, Method: Composition-based stats.
Identities = 11/18 (61%), Positives = 13/18 (72%)
Query: 100 ITKSGGIPLIIECLSSPV 117
I KSGGIP ++ L SPV
Sbjct: 230 IFKSGGIPALVNMLGSPV 247
>pdb|4DJS|A Chain A, Structure Of Beta-Catenin In Complex With A Stapled
Peptide Inhibitor
Length = 518
Score = 30.8 bits (68), Expect = 0.19, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 36/89 (40%), Gaps = 8/89 (8%)
Query: 5 NQRQEERTGRSGTPRLQYLQELVSQFQNSTDEERKEKIVANLANFAYDPYNYTFLRQLNV 64
+Q + RT GT Q+ V + EE E L A D +N +R LN
Sbjct: 397 HQDTQRRTSMGGTQ-----QQFVEGVRM---EEIVEGCTGALHILARDVHNRIVIRGLNT 448
Query: 65 LELFLDCITEPNEKLVEFGVGGICNASVD 93
+ LF+ + P E + G +C + D
Sbjct: 449 IPLFVQLLYSPIENIQRVAAGVLCELAQD 477
Score = 26.9 bits (58), Expect = 2.8, Method: Composition-based stats.
Identities = 14/42 (33%), Positives = 25/42 (59%)
Query: 79 LVEFGVGGICNASVDPANAAIITKSGGIPLIIECLSSPVRNT 120
L++ VG I N ++ PAN A + + G IP +++ L ++T
Sbjct: 359 LIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQDT 400
Score = 26.9 bits (58), Expect = 3.2, Method: Composition-based stats.
Identities = 11/18 (61%), Positives = 14/18 (77%)
Query: 100 ITKSGGIPLIIECLSSPV 117
I KSGGIP +++ L SPV
Sbjct: 84 IFKSGGIPALVKMLGSPV 101
Score = 26.6 bits (57), Expect = 4.4, Method: Composition-based stats.
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 77 EKLVEFGVGGICNASVDPANAAIITKSGGIPLIIECLSSPVRN 119
E++VE G + + D N +I IPL ++ L SP+ N
Sbjct: 420 EEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSPIEN 462
>pdb|1LUJ|A Chain A, Crystal Structure Of The Beta-CateninICAT COMPLEX
Length = 514
Score = 30.8 bits (68), Expect = 0.19, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 36/89 (40%), Gaps = 8/89 (8%)
Query: 5 NQRQEERTGRSGTPRLQYLQELVSQFQNSTDEERKEKIVANLANFAYDPYNYTFLRQLNV 64
+Q + RT GT Q+ V + EE E L A D +N +R LN
Sbjct: 395 HQDTQRRTSMGGTQ-----QQFVEGVRM---EEIVEGCTGALHILARDVHNRIVIRGLNT 446
Query: 65 LELFLDCITEPNEKLVEFGVGGICNASVD 93
+ LF+ + P E + G +C + D
Sbjct: 447 IPLFVQLLYSPIENIQRVAAGVLCELAQD 475
Score = 26.9 bits (58), Expect = 2.8, Method: Composition-based stats.
Identities = 14/42 (33%), Positives = 25/42 (59%)
Query: 79 LVEFGVGGICNASVDPANAAIITKSGGIPLIIECLSSPVRNT 120
L++ VG I N ++ PAN A + + G IP +++ L ++T
Sbjct: 357 LIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQDT 398
Score = 26.9 bits (58), Expect = 3.2, Method: Composition-based stats.
Identities = 11/18 (61%), Positives = 14/18 (77%)
Query: 100 ITKSGGIPLIIECLSSPV 117
I KSGGIP +++ L SPV
Sbjct: 82 IFKSGGIPALVKMLGSPV 99
Score = 26.6 bits (57), Expect = 4.4, Method: Composition-based stats.
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 77 EKLVEFGVGGICNASVDPANAAIITKSGGIPLIIECLSSPVRN 119
E++VE G + + D N +I IPL ++ L SP+ N
Sbjct: 418 EEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSPIEN 460
>pdb|1T08|A Chain A, Crystal Structure Of Beta-CateninICAT HELICAL
DomainUNPHOSPHORYLATED APC R3
Length = 519
Score = 30.8 bits (68), Expect = 0.20, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 36/89 (40%), Gaps = 8/89 (8%)
Query: 5 NQRQEERTGRSGTPRLQYLQELVSQFQNSTDEERKEKIVANLANFAYDPYNYTFLRQLNV 64
+Q + RT GT Q+ V + EE E L A D +N +R LN
Sbjct: 399 HQDTQRRTSMGGTQ-----QQFVEGVRM---EEIVEGCTGALHILARDVHNRIVIRGLNT 450
Query: 65 LELFLDCITEPNEKLVEFGVGGICNASVD 93
+ LF+ + P E + G +C + D
Sbjct: 451 IPLFVQLLYSPIENIQRVAAGVLCELAQD 479
Score = 26.9 bits (58), Expect = 2.9, Method: Composition-based stats.
Identities = 14/42 (33%), Positives = 25/42 (59%)
Query: 79 LVEFGVGGICNASVDPANAAIITKSGGIPLIIECLSSPVRNT 120
L++ VG I N ++ PAN A + + G IP +++ L ++T
Sbjct: 361 LIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQDT 402
Score = 26.9 bits (58), Expect = 3.2, Method: Composition-based stats.
Identities = 11/18 (61%), Positives = 14/18 (77%)
Query: 100 ITKSGGIPLIIECLSSPV 117
I KSGGIP +++ L SPV
Sbjct: 86 IFKSGGIPALVKMLGSPV 103
Score = 26.6 bits (57), Expect = 4.5, Method: Composition-based stats.
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 77 EKLVEFGVGGICNASVDPANAAIITKSGGIPLIIECLSSPVRN 119
E++VE G + + D N +I IPL ++ L SP+ N
Sbjct: 422 EEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSPIEN 464
>pdb|1JPW|A Chain A, Crystal Structure Of A Human Tcf-4 BETA-Catenin Complex
pdb|1JPW|B Chain B, Crystal Structure Of A Human Tcf-4 BETA-Catenin Complex
pdb|1JPW|C Chain C, Crystal Structure Of A Human Tcf-4 BETA-Catenin Complex
Length = 540
Score = 30.8 bits (68), Expect = 0.20, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 36/89 (40%), Gaps = 8/89 (8%)
Query: 5 NQRQEERTGRSGTPRLQYLQELVSQFQNSTDEERKEKIVANLANFAYDPYNYTFLRQLNV 64
+Q + RT GT Q+ V + EE E L A D +N +R LN
Sbjct: 414 HQDTQRRTSMGGTQ-----QQFVEGVRM---EEIVEGCTGALHILARDVHNRIVIRGLNT 465
Query: 65 LELFLDCITEPNEKLVEFGVGGICNASVD 93
+ LF+ + P E + G +C + D
Sbjct: 466 IPLFVQLLYSPIENIQRVAAGVLCELAQD 494
Score = 26.9 bits (58), Expect = 2.9, Method: Composition-based stats.
Identities = 14/42 (33%), Positives = 25/42 (59%)
Query: 79 LVEFGVGGICNASVDPANAAIITKSGGIPLIIECLSSPVRNT 120
L++ VG I N ++ PAN A + + G IP +++ L ++T
Sbjct: 376 LIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQDT 417
Score = 26.9 bits (58), Expect = 3.2, Method: Composition-based stats.
Identities = 11/18 (61%), Positives = 14/18 (77%)
Query: 100 ITKSGGIPLIIECLSSPV 117
I KSGGIP +++ L SPV
Sbjct: 101 IFKSGGIPALVKMLGSPV 118
Score = 26.6 bits (57), Expect = 4.5, Method: Composition-based stats.
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 77 EKLVEFGVGGICNASVDPANAAIITKSGGIPLIIECLSSPVRN 119
E++VE G + + D N +I IPL ++ L SP+ N
Sbjct: 437 EEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSPIEN 479
>pdb|1G3J|A Chain A, Crystal Structure Of The Xtcf3-CbdBETA-Catenin Armadillo
Repeat Complex
pdb|1G3J|C Chain C, Crystal Structure Of The Xtcf3-CbdBETA-Catenin Armadillo
Repeat Complex
pdb|1TH1|A Chain A, Beta-Catenin In Complex With A Phosphorylated Apc 20aa
Repeat Fragment
pdb|1TH1|B Chain B, Beta-Catenin In Complex With A Phosphorylated Apc 20aa
Repeat Fragment
Length = 532
Score = 30.8 bits (68), Expect = 0.20, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 36/89 (40%), Gaps = 8/89 (8%)
Query: 5 NQRQEERTGRSGTPRLQYLQELVSQFQNSTDEERKEKIVANLANFAYDPYNYTFLRQLNV 64
+Q + RT GT Q+ V + EE E L A D +N +R LN
Sbjct: 412 HQDTQRRTSMGGTQ-----QQFVEGVRM---EEIVEGCTGALHILARDVHNRIVIRGLNT 463
Query: 65 LELFLDCITEPNEKLVEFGVGGICNASVD 93
+ LF+ + P E + G +C + D
Sbjct: 464 IPLFVQLLYSPIENIQRVAAGVLCELAQD 492
Score = 26.9 bits (58), Expect = 2.9, Method: Composition-based stats.
Identities = 14/42 (33%), Positives = 25/42 (59%)
Query: 79 LVEFGVGGICNASVDPANAAIITKSGGIPLIIECLSSPVRNT 120
L++ VG I N ++ PAN A + + G IP +++ L ++T
Sbjct: 374 LIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQDT 415
Score = 26.9 bits (58), Expect = 3.2, Method: Composition-based stats.
Identities = 11/18 (61%), Positives = 14/18 (77%)
Query: 100 ITKSGGIPLIIECLSSPV 117
I KSGGIP +++ L SPV
Sbjct: 99 IFKSGGIPALVKMLGSPV 116
Score = 26.6 bits (57), Expect = 4.5, Method: Composition-based stats.
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 77 EKLVEFGVGGICNASVDPANAAIITKSGGIPLIIECLSSPVRN 119
E++VE G + + D N +I IPL ++ L SP+ N
Sbjct: 435 EEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSPIEN 477
>pdb|1QZ7|A Chain A, Beta-Catenin Binding Domain Of Axin In Complex With Beta-
Catenin
Length = 533
Score = 30.8 bits (68), Expect = 0.20, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 36/89 (40%), Gaps = 8/89 (8%)
Query: 5 NQRQEERTGRSGTPRLQYLQELVSQFQNSTDEERKEKIVANLANFAYDPYNYTFLRQLNV 64
+Q + RT GT Q+ V + EE E L A D +N +R LN
Sbjct: 412 HQDTQRRTSMGGTQ-----QQFVEGVRM---EEIVEGCTGALHILARDVHNRIVIRGLNT 463
Query: 65 LELFLDCITEPNEKLVEFGVGGICNASVD 93
+ LF+ + P E + G +C + D
Sbjct: 464 IPLFVQLLYSPIENIQRVAAGVLCELAQD 492
Score = 26.9 bits (58), Expect = 2.8, Method: Composition-based stats.
Identities = 14/42 (33%), Positives = 25/42 (59%)
Query: 79 LVEFGVGGICNASVDPANAAIITKSGGIPLIIECLSSPVRNT 120
L++ VG I N ++ PAN A + + G IP +++ L ++T
Sbjct: 374 LIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQDT 415
Score = 26.9 bits (58), Expect = 3.2, Method: Composition-based stats.
Identities = 11/18 (61%), Positives = 14/18 (77%)
Query: 100 ITKSGGIPLIIECLSSPV 117
I KSGGIP +++ L SPV
Sbjct: 99 IFKSGGIPALVKMLGSPV 116
Score = 26.6 bits (57), Expect = 4.4, Method: Composition-based stats.
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 77 EKLVEFGVGGICNASVDPANAAIITKSGGIPLIIECLSSPVRN 119
E++VE G + + D N +I IPL ++ L SP+ N
Sbjct: 435 EEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSPIEN 477
>pdb|1I7X|A Chain A, Beta-CateninE-Cadherin Complex
pdb|1I7X|C Chain C, Beta-CateninE-Cadherin Complex
pdb|1I7W|A Chain A, Beta-CateninPHOSPHORYLATED E-Cadherin Complex
pdb|1I7W|C Chain C, Beta-CateninPHOSPHORYLATED E-Cadherin Complex
pdb|1JPP|A Chain A, The Structure Of A Beta-Catenin Binding Repeat From
Adenomatous Polyposis Coli (Apc) In Complex With
Beta-Catenin
pdb|1JPP|B Chain B, The Structure Of A Beta-Catenin Binding Repeat From
Adenomatous Polyposis Coli (Apc) In Complex With
Beta-Catenin
pdb|1M1E|A Chain A, Beta-Catenin Armadillo Repeat Domain Bound To Icat
pdb|1V18|A Chain A, The Crystal Structure Of Beta-Catenin Armadillo Repeat
Complexed With A Phosphorylated Apc 20mer Repeat
Length = 538
Score = 30.8 bits (68), Expect = 0.20, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 36/89 (40%), Gaps = 8/89 (8%)
Query: 5 NQRQEERTGRSGTPRLQYLQELVSQFQNSTDEERKEKIVANLANFAYDPYNYTFLRQLNV 64
+Q + RT GT Q+ V + EE E L A D +N +R LN
Sbjct: 411 HQDTQRRTSMGGTQ-----QQFVEGVRM---EEIVEGCTGALHILARDVHNRIVIRGLNT 462
Query: 65 LELFLDCITEPNEKLVEFGVGGICNASVD 93
+ LF+ + P E + G +C + D
Sbjct: 463 IPLFVQLLYSPIENIQRVAAGVLCELAQD 491
Score = 26.9 bits (58), Expect = 2.8, Method: Composition-based stats.
Identities = 14/42 (33%), Positives = 25/42 (59%)
Query: 79 LVEFGVGGICNASVDPANAAIITKSGGIPLIIECLSSPVRNT 120
L++ VG I N ++ PAN A + + G IP +++ L ++T
Sbjct: 373 LIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQDT 414
Score = 26.9 bits (58), Expect = 3.3, Method: Composition-based stats.
Identities = 11/18 (61%), Positives = 14/18 (77%)
Query: 100 ITKSGGIPLIIECLSSPV 117
I KSGGIP +++ L SPV
Sbjct: 98 IFKSGGIPALVKMLGSPV 115
Score = 26.2 bits (56), Expect = 4.5, Method: Composition-based stats.
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 77 EKLVEFGVGGICNASVDPANAAIITKSGGIPLIIECLSSPVRN 119
E++VE G + + D N +I IPL ++ L SP+ N
Sbjct: 434 EEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSPIEN 476
>pdb|2BCT|A Chain A, The Armadillo Repeat Region From Murine Beta-Catenin
Length = 516
Score = 30.8 bits (68), Expect = 0.20, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 36/89 (40%), Gaps = 8/89 (8%)
Query: 5 NQRQEERTGRSGTPRLQYLQELVSQFQNSTDEERKEKIVANLANFAYDPYNYTFLRQLNV 64
+Q + RT GT Q+ V + EE E L A D +N +R LN
Sbjct: 395 HQDTQRRTSMGGTQ-----QQFVEGVRM---EEIVEGCTGALHILARDVHNRIVIRGLNT 446
Query: 65 LELFLDCITEPNEKLVEFGVGGICNASVD 93
+ LF+ + P E + G +C + D
Sbjct: 447 IPLFVQLLYSPIENIQRVAAGVLCELAQD 475
Score = 26.9 bits (58), Expect = 2.8, Method: Composition-based stats.
Identities = 14/42 (33%), Positives = 25/42 (59%)
Query: 79 LVEFGVGGICNASVDPANAAIITKSGGIPLIIECLSSPVRNT 120
L++ VG I N ++ PAN A + + G IP +++ L ++T
Sbjct: 357 LIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQDT 398
Score = 26.9 bits (58), Expect = 3.2, Method: Composition-based stats.
Identities = 11/18 (61%), Positives = 14/18 (77%)
Query: 100 ITKSGGIPLIIECLSSPV 117
I KSGGIP +++ L SPV
Sbjct: 82 IFKSGGIPALVKMLGSPV 99
Score = 26.6 bits (57), Expect = 4.4, Method: Composition-based stats.
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 77 EKLVEFGVGGICNASVDPANAAIITKSGGIPLIIECLSSPVRN 119
E++VE G + + D N +I IPL ++ L SP+ N
Sbjct: 418 EEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSPIEN 460
>pdb|1JDH|A Chain A, Crystal Structure Of Beta-Catenin And Htcf-4
Length = 529
Score = 30.8 bits (68), Expect = 0.20, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 36/89 (40%), Gaps = 8/89 (8%)
Query: 5 NQRQEERTGRSGTPRLQYLQELVSQFQNSTDEERKEKIVANLANFAYDPYNYTFLRQLNV 64
+Q + RT GT Q+ V + EE E L A D +N +R LN
Sbjct: 410 HQDTQRRTSMGGTQ-----QQFVEGVRM---EEIVEGCTGALHILARDVHNRIVIRGLNT 461
Query: 65 LELFLDCITEPNEKLVEFGVGGICNASVD 93
+ LF+ + P E + G +C + D
Sbjct: 462 IPLFVQLLYSPIENIQRVAAGVLCELAQD 490
Score = 26.9 bits (58), Expect = 2.8, Method: Composition-based stats.
Identities = 14/42 (33%), Positives = 25/42 (59%)
Query: 79 LVEFGVGGICNASVDPANAAIITKSGGIPLIIECLSSPVRNT 120
L++ VG I N ++ PAN A + + G IP +++ L ++T
Sbjct: 372 LIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQDT 413
Score = 26.9 bits (58), Expect = 3.3, Method: Composition-based stats.
Identities = 11/18 (61%), Positives = 14/18 (77%)
Query: 100 ITKSGGIPLIIECLSSPV 117
I KSGGIP +++ L SPV
Sbjct: 97 IFKSGGIPALVKMLGSPV 114
Score = 26.2 bits (56), Expect = 4.5, Method: Composition-based stats.
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 77 EKLVEFGVGGICNASVDPANAAIITKSGGIPLIIECLSSPVRN 119
E++VE G + + D N +I IPL ++ L SP+ N
Sbjct: 433 EEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSPIEN 475
>pdb|3OUW|A Chain A, Structure Of Beta-Catenin With Lef-1
pdb|3OUX|A Chain A, Structure Of Beta-Catenin With Phosphorylated Lef-1
Length = 540
Score = 30.8 bits (68), Expect = 0.20, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 36/89 (40%), Gaps = 8/89 (8%)
Query: 5 NQRQEERTGRSGTPRLQYLQELVSQFQNSTDEERKEKIVANLANFAYDPYNYTFLRQLNV 64
+Q + RT GT Q+ V + EE E L A D +N +R LN
Sbjct: 413 HQDTQRRTSMGGTQ-----QQFVEGVRM---EEIVEGCTGALHILARDVHNRIVIRGLNT 464
Query: 65 LELFLDCITEPNEKLVEFGVGGICNASVD 93
+ LF+ + P E + G +C + D
Sbjct: 465 IPLFVQLLYSPIENIQRVAAGVLCELAQD 493
Score = 26.9 bits (58), Expect = 2.9, Method: Composition-based stats.
Identities = 14/42 (33%), Positives = 25/42 (59%)
Query: 79 LVEFGVGGICNASVDPANAAIITKSGGIPLIIECLSSPVRNT 120
L++ VG I N ++ PAN A + + G IP +++ L ++T
Sbjct: 375 LIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQDT 416
Score = 26.9 bits (58), Expect = 3.3, Method: Composition-based stats.
Identities = 11/18 (61%), Positives = 14/18 (77%)
Query: 100 ITKSGGIPLIIECLSSPV 117
I KSGGIP +++ L SPV
Sbjct: 100 IFKSGGIPALVKMLGSPV 117
Score = 26.2 bits (56), Expect = 4.5, Method: Composition-based stats.
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 77 EKLVEFGVGGICNASVDPANAAIITKSGGIPLIIECLSSPVRN 119
E++VE G + + D N +I IPL ++ L SP+ N
Sbjct: 436 EEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSPIEN 478
>pdb|3TX7|A Chain A, Crystal Structure Of Lrh-1BETA-Catenin Complex
Length = 527
Score = 30.8 bits (68), Expect = 0.21, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 36/89 (40%), Gaps = 8/89 (8%)
Query: 5 NQRQEERTGRSGTPRLQYLQELVSQFQNSTDEERKEKIVANLANFAYDPYNYTFLRQLNV 64
+Q + RT GT Q+ V + EE E L A D +N +R LN
Sbjct: 408 HQDTQRRTSMGGTQ-----QQFVEGVRM---EEIVEGCTGALHILARDVHNRIVIRGLNT 459
Query: 65 LELFLDCITEPNEKLVEFGVGGICNASVD 93
+ LF+ + P E + G +C + D
Sbjct: 460 IPLFVQLLYSPIENIQRVAAGVLCELAQD 488
Score = 26.9 bits (58), Expect = 2.9, Method: Composition-based stats.
Identities = 14/42 (33%), Positives = 25/42 (59%)
Query: 79 LVEFGVGGICNASVDPANAAIITKSGGIPLIIECLSSPVRNT 120
L++ VG I N ++ PAN A + + G IP +++ L ++T
Sbjct: 370 LIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQDT 411
Score = 26.9 bits (58), Expect = 3.4, Method: Composition-based stats.
Identities = 11/18 (61%), Positives = 14/18 (77%)
Query: 100 ITKSGGIPLIIECLSSPV 117
I KSGGIP +++ L SPV
Sbjct: 95 IFKSGGIPALVKMLGSPV 112
Score = 26.6 bits (57), Expect = 4.5, Method: Composition-based stats.
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 77 EKLVEFGVGGICNASVDPANAAIITKSGGIPLIIECLSSPVRN 119
E++VE G + + D N +I IPL ++ L SP+ N
Sbjct: 431 EEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSPIEN 473
>pdb|2GL7|A Chain A, Crystal Structure Of A Beta-CateninBCL9TCF4 COMPLEX
pdb|2GL7|D Chain D, Crystal Structure Of A Beta-CateninBCL9TCF4 COMPLEX
Length = 550
Score = 30.8 bits (68), Expect = 0.23, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 36/89 (40%), Gaps = 8/89 (8%)
Query: 5 NQRQEERTGRSGTPRLQYLQELVSQFQNSTDEERKEKIVANLANFAYDPYNYTFLRQLNV 64
+Q + RT GT Q+ V + EE E L A D +N +R LN
Sbjct: 408 HQDTQRRTSMGGTQ-----QQFVEGVRM---EEIVEGCTGALHILARDVHNRIVIRGLNT 459
Query: 65 LELFLDCITEPNEKLVEFGVGGICNASVD 93
+ LF+ + P E + G +C + D
Sbjct: 460 IPLFVQLLYSPIENIQRVAAGVLCELAQD 488
Score = 26.9 bits (58), Expect = 3.0, Method: Composition-based stats.
Identities = 14/42 (33%), Positives = 25/42 (59%)
Query: 79 LVEFGVGGICNASVDPANAAIITKSGGIPLIIECLSSPVRNT 120
L++ VG I N ++ PAN A + + G IP +++ L ++T
Sbjct: 370 LIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQDT 411
Score = 26.6 bits (57), Expect = 3.5, Method: Composition-based stats.
Identities = 11/18 (61%), Positives = 14/18 (77%)
Query: 100 ITKSGGIPLIIECLSSPV 117
I KSGGIP +++ L SPV
Sbjct: 95 IFKSGGIPALVKMLGSPV 112
Score = 26.2 bits (56), Expect = 4.8, Method: Composition-based stats.
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 77 EKLVEFGVGGICNASVDPANAAIITKSGGIPLIIECLSSPVRN 119
E++VE G + + D N +I IPL ++ L SP+ N
Sbjct: 431 EEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSPIEN 473
>pdb|3O4Z|A Chain A, Tel2 Structure And Function In The Hsp90-Dependent
Maturation Of Mtor And Atr Complexes
pdb|3O4Z|B Chain B, Tel2 Structure And Function In The Hsp90-Dependent
Maturation Of Mtor And Atr Complexes
pdb|3O4Z|C Chain C, Tel2 Structure And Function In The Hsp90-Dependent
Maturation Of Mtor And Atr Complexes
pdb|3O4Z|D Chain D, Tel2 Structure And Function In The Hsp90-Dependent
Maturation Of Mtor And Atr Complexes
Length = 647
Score = 28.5 bits (62), Expect = 1.1, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 29/54 (53%)
Query: 21 QYLQELVSQFQNSTDEERKEKIVANLANFAYDPYNYTFLRQLNVLELFLDCITE 74
+++ LVS+F + TDEE K L FA N++ ++ E FL+ +T+
Sbjct: 278 KFVSALVSKFADFTDEEVDTKTCELLVLFAVHNLNHSQREEIAHDERFLNGVTK 331
>pdb|3SLA|A Chain A, X-Ray Structure Of First Four Repeats Of Human
Beta-Catenin
pdb|3SLA|B Chain B, X-Ray Structure Of First Four Repeats Of Human
Beta-Catenin
pdb|3SLA|C Chain C, X-Ray Structure Of First Four Repeats Of Human
Beta-Catenin
pdb|3SLA|D Chain D, X-Ray Structure Of First Four Repeats Of Human
Beta-Catenin
pdb|3SLA|E Chain E, X-Ray Structure Of First Four Repeats Of Human
Beta-Catenin
Length = 168
Score = 27.7 bits (60), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 11/18 (61%), Positives = 14/18 (77%)
Query: 100 ITKSGGIPLIIECLSSPV 117
I KSGGIP +++ L SPV
Sbjct: 93 IFKSGGIPALVKMLGSPV 110
>pdb|3SL9|A Chain A, X-Ray Structure Of Beta Catenin In Complex With Bcl9
pdb|3SL9|B Chain B, X-Ray Structure Of Beta Catenin In Complex With Bcl9
pdb|3SL9|E Chain E, X-Ray Structure Of Beta Catenin In Complex With Bcl9
pdb|3SL9|G Chain G, X-Ray Structure Of Beta Catenin In Complex With Bcl9
Length = 167
Score = 27.7 bits (60), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 11/18 (61%), Positives = 14/18 (77%)
Query: 100 ITKSGGIPLIIECLSSPV 117
I KSGGIP +++ L SPV
Sbjct: 93 IFKSGGIPALVKMLGSPV 110
>pdb|2XZM|4 Chain 4, Crystal Structure Of The Eukaryotic 40s Ribosomal Subunit
In Complex With Initiation Factor 1. This File Contains
The 40s Subunit And Initiation Factor For Molecule 1
pdb|2XZN|4 Chain 4, Crystal Structure Of The Eukaryotic 40s Ribosomal Subunit
In Complex With Initiation Factor 1. This File Contains
The 40s Subunit And Initiation Factor For Molecule 2
Length = 265
Score = 27.3 bits (59), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 19/29 (65%)
Query: 1 MFTNNQRQEERTGRSGTPRLQYLQELVSQ 29
++++ ++ E+ TGR G P Q Q L++Q
Sbjct: 237 LYSHEKKGEKATGRDGAPEEQAAQNLLAQ 265
>pdb|3GFF|A Chain A, Crystal Structure Of Iroe-Like Serine Hydrolase
(Np_718593.1) From Shewanella Oneidensis At 2.12 A
Resolution
pdb|3GFF|B Chain B, Crystal Structure Of Iroe-Like Serine Hydrolase
(Np_718593.1) From Shewanella Oneidensis At 2.12 A
Resolution
Length = 331
Score = 27.3 bits (59), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 21/43 (48%)
Query: 10 ERTGRSGTPRLQYLQELVSQFQNSTDEERKEKIVANLANFAYD 52
ER G TP QYL++L+ ERK+ + +FA D
Sbjct: 289 ERFGHKVTPSQQYLEQLIQYSDRQQLTERKQXLEGLRQHFAKD 331
>pdb|3MQ1|A Chain A, Crystal Structure Of Dust Mite Allergen Der P 5
pdb|3MQ1|B Chain B, Crystal Structure Of Dust Mite Allergen Der P 5
pdb|3MQ1|C Chain C, Crystal Structure Of Dust Mite Allergen Der P 5
pdb|3MQ1|D Chain D, Crystal Structure Of Dust Mite Allergen Der P 5
pdb|3MQ1|E Chain E, Crystal Structure Of Dust Mite Allergen Der P 5
pdb|3MQ1|F Chain F, Crystal Structure Of Dust Mite Allergen Der P 5
Length = 103
Score = 26.9 bits (58), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 14 RSGTPRLQYLQELVSQFQNSTDEERKEKIVANL 46
+ G L YLQE ++ F+ +E K+KIVA +
Sbjct: 14 KKGELALFYLQEQINHFEEKPTKEMKDKIVAEM 46
>pdb|4HXT|A Chain A, Crystal Structure Of Engineered Protein. Northeast
Structural Genomics Consortium Target Or329
Length = 252
Score = 26.6 bits (57), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 20/93 (21%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
Query: 25 ELVSQFQNSTDEERKEKIVANLANFAYDPYN-YTFLRQLNVLELFLDCITEPNEKLVEFG 83
E++ + STD E +++ LAN A P + +E+ + +T + ++ +
Sbjct: 47 EVLVKLLTSTDSEVQKEAARALANIASGPDEAIKAIVDAGGVEVLVKLLTSTDSEVQKEA 106
Query: 84 VGGICNASVDPANA-AIITKSGGIPLIIECLSS 115
+ N + P A I +GG+ ++++ L+S
Sbjct: 107 ARALANIASGPDEAIKAIVDAGGVEVLVKLLTS 139
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 25.4 bits (54), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Query: 40 EKIVANLANFAYDPYNYTFLRQLNVLELFLDCITEPNEKLV-EFGVGGICN 89
E I + N + + L+ N++ L C+ EPN LV EF GG N
Sbjct: 44 EDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLN 94
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.136 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,704,492
Number of Sequences: 62578
Number of extensions: 133933
Number of successful extensions: 431
Number of sequences better than 100.0: 25
Number of HSP's better than 100.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 358
Number of HSP's gapped (non-prelim): 73
length of query: 128
length of database: 14,973,337
effective HSP length: 87
effective length of query: 41
effective length of database: 9,529,051
effective search space: 390691091
effective search space used: 390691091
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 45 (21.9 bits)