Query 033071
Match_columns 128
No_of_seqs 70 out of 72
Neff 4.0
Searched_HMMs 29240
Date Mon Mar 25 15:26:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033071.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/033071hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4db6_A Armadillo repeat protei 99.4 6.9E-13 2.4E-17 95.6 8.3 103 22-125 13-117 (210)
2 3l6x_A Catenin delta-1; cateni 99.4 3.4E-13 1.2E-17 118.9 7.1 115 4-119 31-149 (584)
3 3tt9_A Plakophilin-2; cell adh 99.4 5.5E-13 1.9E-17 105.4 6.9 100 23-123 10-114 (233)
4 4hxt_A De novo protein OR329; 99.4 2E-12 6.7E-17 94.0 8.5 104 21-125 44-149 (252)
5 4db8_A Armadillo-repeat protei 99.4 2.2E-12 7.6E-17 95.1 8.8 104 21-125 54-159 (252)
6 4db6_A Armadillo repeat protei 99.3 3.4E-12 1.2E-16 92.0 8.8 104 21-125 54-159 (210)
7 1xm9_A Plakophilin 1; armadill 99.3 4.5E-12 1.5E-16 105.0 10.1 101 23-124 4-107 (457)
8 4db8_A Armadillo-repeat protei 99.3 1.7E-11 5.9E-16 90.3 9.9 104 21-125 96-201 (252)
9 4hxt_A De novo protein OR329; 99.3 1.4E-11 4.8E-16 89.4 8.9 103 22-125 3-107 (252)
10 1xm9_A Plakophilin 1; armadill 99.2 9.5E-12 3.2E-16 103.0 6.7 94 19-114 42-137 (457)
11 3nmw_A APC variant protein; AR 99.2 1.3E-11 4.4E-16 101.5 7.5 105 20-124 213-325 (354)
12 3tt9_A Plakophilin-2; cell adh 99.2 1E-11 3.5E-16 98.1 5.6 95 18-114 49-145 (233)
13 3ul1_B Importin subunit alpha- 99.2 4.1E-11 1.4E-15 100.0 9.2 101 20-120 99-201 (510)
14 3nmw_A APC variant protein; AR 99.2 3.4E-11 1.1E-15 99.0 6.7 105 20-124 169-283 (354)
15 3tpo_A Importin subunit alpha- 99.1 1.1E-10 3.7E-15 97.5 8.9 102 19-120 117-220 (529)
16 2z6h_A Catenin beta-1, beta-ca 99.1 1.4E-10 4.9E-15 98.5 9.0 91 34-124 428-518 (644)
17 3nmz_A APC variant protein; pr 99.1 7.3E-11 2.5E-15 100.7 7.0 105 20-124 329-441 (458)
18 3nmz_A APC variant protein; pr 99.1 1.2E-10 4.1E-15 99.4 8.3 98 21-119 243-345 (458)
19 1jdh_A Beta-catenin; beta-cate 99.1 1.2E-10 4.2E-15 93.5 7.5 100 21-120 59-159 (529)
20 3l6x_A Catenin delta-1; cateni 99.1 1.4E-10 4.6E-15 102.4 7.9 93 19-113 88-183 (584)
21 1jdh_A Beta-catenin; beta-cate 99.1 3.6E-10 1.2E-14 90.8 8.8 91 35-125 432-522 (529)
22 4b8j_A Importin subunit alpha- 99.0 6.9E-10 2.4E-14 90.9 8.2 102 21-122 117-221 (528)
23 2z6g_A B-catenin; FULL-length, 99.0 6.9E-10 2.4E-14 98.0 8.2 90 35-124 565-654 (780)
24 3tpo_A Importin subunit alpha- 99.0 5.4E-10 1.8E-14 93.3 6.9 103 22-125 336-441 (529)
25 1xqr_A HSPBP1 protein; armadil 98.9 1.5E-09 5.3E-14 87.3 7.5 104 21-124 81-187 (296)
26 1xqr_A HSPBP1 protein; armadil 98.9 1.1E-09 3.8E-14 88.2 6.6 103 18-120 25-141 (296)
27 2z6h_A Catenin beta-1, beta-ca 98.9 2.2E-09 7.4E-14 91.3 8.7 105 21-125 352-478 (644)
28 3ul1_B Importin subunit alpha- 98.9 3.7E-09 1.3E-13 88.3 9.7 102 23-125 59-164 (510)
29 1wa5_B Importin alpha subunit; 98.9 2.4E-09 8.3E-14 88.1 7.6 105 20-124 129-235 (530)
30 2jdq_A Importin alpha-1 subuni 98.9 7.9E-09 2.7E-13 81.1 8.8 104 21-124 64-170 (450)
31 2z6g_A B-catenin; FULL-length, 98.8 5.5E-09 1.9E-13 92.3 7.2 101 20-120 191-292 (780)
32 4b8j_A Importin subunit alpha- 98.8 2.2E-08 7.4E-13 82.0 9.3 106 19-125 72-181 (528)
33 3now_A UNC-45 protein, SD10334 98.7 2.6E-08 9E-13 90.9 8.4 103 20-123 420-555 (810)
34 2jdq_A Importin alpha-1 subuni 98.7 3.1E-08 1.1E-12 77.7 7.6 104 21-125 276-382 (450)
35 1wa5_B Importin alpha subunit; 98.6 8E-08 2.7E-12 79.0 7.9 104 21-125 341-449 (530)
36 3now_A UNC-45 protein, SD10334 98.6 6.3E-08 2.2E-12 88.4 6.7 104 21-125 623-729 (810)
37 3opb_A SWI5-dependent HO expre 98.2 3.4E-06 1.2E-10 77.3 7.6 65 55-119 449-513 (778)
38 4gmo_A Putative uncharacterize 98.1 2.3E-06 7.9E-11 74.8 4.2 97 19-116 32-131 (684)
39 3opb_A SWI5-dependent HO expre 98.0 7.5E-06 2.6E-10 75.0 6.5 93 21-114 457-555 (778)
40 4gmo_A Putative uncharacterize 96.8 0.00073 2.5E-08 59.1 4.0 66 59-125 31-97 (684)
41 3ltm_A Alpha-REP4; protein eng 96.5 0.0093 3.2E-07 42.7 7.3 95 18-124 16-132 (211)
42 3ltm_A Alpha-REP4; protein eng 96.1 0.022 7.5E-07 40.7 7.3 83 21-124 81-163 (211)
43 3ltj_A Alpharep-4; protein eng 96.1 0.027 9.1E-07 40.0 7.5 58 22-90 46-103 (201)
44 3ltj_A Alpharep-4; protein eng 95.9 0.033 1.1E-06 39.5 7.3 83 21-124 76-158 (201)
45 1te4_A Conserved protein MTH18 95.5 0.031 1.1E-06 38.0 5.8 82 23-125 44-125 (131)
46 3grl_A General vesicular trans 95.3 0.041 1.4E-06 49.8 7.4 105 18-125 18-143 (651)
47 3grl_A General vesicular trans 95.1 0.058 2E-06 48.8 7.6 97 22-119 167-269 (651)
48 1oyz_A Hypothetical protein YI 94.8 0.12 4.1E-06 38.4 7.6 47 64-120 129-175 (280)
49 1oyz_A Hypothetical protein YI 94.7 0.1 3.5E-06 38.8 7.1 74 33-124 139-212 (280)
50 2vgl_B AP-2 complex subunit be 93.5 0.088 3E-06 44.6 5.1 59 32-93 131-190 (591)
51 1te4_A Conserved protein MTH18 91.4 0.013 4.6E-07 39.8 -2.2 82 21-124 12-93 (131)
52 2vgl_B AP-2 complex subunit be 88.8 0.32 1.1E-05 41.1 3.7 57 66-125 124-181 (591)
53 1b3u_A Protein (protein phosph 88.0 1.4 4.9E-05 35.1 6.8 69 21-91 241-309 (588)
54 2qk2_A LP04448P; mini spindles 86.7 4.7 0.00016 29.4 8.6 94 22-124 99-196 (242)
55 3dad_A FH1/FH2 domain-containi 85.8 3 0.0001 35.0 7.9 100 25-125 122-223 (339)
56 1b3u_A Protein (protein phosph 85.7 2.7 9.3E-05 33.5 7.3 56 63-120 164-219 (588)
57 1ibr_B P95, importin beta-1 su 83.0 2.7 9.3E-05 32.4 6.0 71 21-92 216-288 (462)
58 2qk2_A LP04448P; mini spindles 82.3 5.7 0.0002 28.9 7.3 92 20-119 55-148 (242)
59 4fdd_A Transportin-1; heat rep 78.6 4.1 0.00014 35.3 6.2 100 23-125 176-277 (852)
60 1w63_A Adapter-related protein 77.4 4 0.00014 34.8 5.8 57 64-125 143-200 (618)
61 4fdd_A Transportin-1; heat rep 74.7 3.6 0.00012 35.6 4.8 92 28-123 365-461 (852)
62 1ibr_B P95, importin beta-1 su 73.0 8.7 0.0003 29.5 6.2 67 25-93 369-438 (462)
63 3dad_A FH1/FH2 domain-containi 71.8 1.7 5.9E-05 36.5 2.0 58 70-127 125-183 (339)
64 1w63_A Adapter-related protein 71.1 13 0.00046 31.6 7.5 87 21-114 141-229 (618)
65 1u6g_C TIP120 protein, CAND1; 70.6 17 0.00057 32.8 8.3 93 22-120 7-102 (1230)
66 3u0r_A Apoptosis inhibitor 5; 70.1 3.9 0.00013 36.2 4.0 88 18-118 27-114 (507)
67 2vgl_A Adaptor protein complex 69.2 31 0.0011 29.6 9.4 83 32-122 339-422 (621)
68 3b2a_A TON_1937, putative unch 68.7 4.7 0.00016 33.0 3.9 61 64-125 34-96 (265)
69 2bpt_A Importin beta-1 subunit 67.9 11 0.00037 31.7 6.1 88 26-117 602-693 (861)
70 4ffb_C Protein STU2; tubulin f 64.5 8.6 0.0003 28.9 4.5 59 18-91 25-83 (278)
71 2qk1_A Protein STU2; STU2P, XM 63.4 19 0.00065 27.2 6.3 98 21-123 104-210 (249)
72 3tjz_B Coatomer subunit gamma; 62.3 48 0.0016 27.2 8.9 59 32-95 150-209 (355)
73 1qgr_A Protein (importin beta 61.9 14 0.00048 31.1 5.7 100 21-121 128-234 (876)
74 1u6g_C TIP120 protein, CAND1; 58.0 13 0.00043 33.7 5.0 92 21-117 133-226 (1230)
75 2bpt_A Importin beta-1 subunit 57.2 43 0.0015 28.1 7.8 81 32-116 379-466 (861)
76 2vgl_A Adaptor protein complex 56.3 54 0.0018 28.1 8.5 96 15-120 51-164 (621)
77 2x19_B Importin-13; nuclear tr 53.4 42 0.0014 29.2 7.4 75 20-102 23-103 (963)
78 3b2a_A TON_1937, putative unch 52.9 7.8 0.00027 31.8 2.5 58 63-125 150-210 (265)
79 3o2t_A Symplekin; heat repeat, 52.6 56 0.0019 27.4 7.9 61 63-125 100-175 (386)
80 1qgr_A Protein (importin beta 44.9 75 0.0026 26.7 7.4 59 32-92 376-437 (876)
81 3tjz_B Coatomer subunit gamma; 43.7 30 0.001 28.5 4.8 26 66-91 107-132 (355)
82 1wa5_C Importin alpha RE-expor 37.9 86 0.003 27.7 7.1 66 24-92 458-525 (960)
83 4e17_B Catenin alpha-1; four h 37.1 17 0.00059 21.9 1.7 13 20-32 25-37 (40)
84 2qk1_A Protein STU2; STU2P, XM 36.9 96 0.0033 23.2 6.4 69 22-91 147-219 (249)
85 3l9t_A Putative uncharacterize 33.6 1.8E+02 0.0061 23.1 8.3 56 64-125 140-198 (240)
86 3mq1_A Mite allergen DER P 5; 33.3 39 0.0013 24.1 3.4 26 19-44 19-44 (103)
87 3s4w_B Protein FACD2, fanconi 30.4 28 0.00096 34.0 2.9 38 64-102 193-230 (1323)
88 3uj4_A Inositol 1,4,5-trisphos 29.8 1E+02 0.0035 27.3 6.2 65 39-103 473-577 (604)
89 2f31_A Diaphanous protein homo 28.6 1.8E+02 0.0063 21.7 7.3 72 51-122 31-114 (233)
90 4e18_B Catenin alpha-1; four h 27.2 32 0.0011 22.3 1.8 14 20-33 44-57 (59)
91 2jmh_A BLO T 5, mite allergen 26.4 48 0.0016 24.2 2.9 26 19-44 34-59 (119)
92 2cpg_A REPA protein, transcrip 25.1 32 0.0011 19.1 1.5 27 6-32 15-41 (45)
93 2lm9_A BLO T 21 allergen; DUST 25.0 33 0.0011 24.2 1.7 26 19-44 13-38 (96)
94 2iw3_A Elongation factor 3A; a 24.1 1.1E+02 0.0038 28.7 5.6 95 20-118 132-227 (986)
95 3eg5_B Protein diaphanous homo 23.9 2E+02 0.0068 23.5 6.5 73 50-122 96-180 (383)
96 1ho8_A Vacuolar ATP synthase s 23.4 37 0.0013 29.6 2.1 66 54-125 392-468 (480)
97 2kua_A BCL-2-like protein 10; 21.9 2.4E+02 0.0083 20.7 8.2 113 6-119 23-169 (170)
98 1f16_A Protein (apoptosis regu 20.9 2.6E+02 0.009 20.8 8.0 99 20-121 60-173 (192)
99 2gom_A Fibrinogen-binding prot 20.5 69 0.0024 20.6 2.4 31 23-53 10-42 (61)
100 3gs3_A Symplekin, LD45768P; he 20.4 2.4E+02 0.0081 22.0 6.1 54 35-90 47-117 (257)
No 1
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A
Probab=99.41 E-value=6.9e-13 Score=95.65 Aligned_cols=103 Identities=18% Similarity=0.346 Sum_probs=91.6
Q ss_pred HHHHHHHHhhcCChHHHHHHHHHHhhhhc-cCCCcHHHHHhhcchhHHHHhhcCCcHHHHHHHhhhhhhccc-ChhhHHH
Q 033071 22 YLQELVSQFQNSTDEERKEKIVANLANFA-YDPYNYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNASV-DPANAAI 99 (128)
Q Consensus 22 yLq~LV~Efq~t~~~eakeqvlAnLaNFA-yDP~N~~~Lrql~vidlFld~L~~~n~~l~efaiggLcNlcl-Dp~n~~~ 99 (128)
+-..|+.-. .+++.+.|+.++..|+|++ .++.+...+.+.++++.++.+|.++++.+++.|+..|+|+|. ++.+++.
T Consensus 13 ~~~~l~~LL-~s~~~~v~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~ 91 (210)
T 4db6_A 13 ELPQMVQQL-NSPDQQELQSALRKLSQIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQA 91 (210)
T ss_dssp CHHHHHHHT-TCSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHH
T ss_pred hhHHHHHHh-cCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCcHHHHH
Confidence 334555555 6778999999999999999 679999999999999999999999999999999999999995 7999999
Q ss_pred HHhcCChhhHHhhhcCCChhhhhhcc
Q 033071 100 ITKSGGIPLIIECLSSPVRNTVNQRF 125 (128)
Q Consensus 100 I~~~ggi~~i~~~LsS~~e~tVl~a~ 125 (128)
|++.|+|+.++.+|+++++++...|.
T Consensus 92 i~~~g~i~~L~~lL~~~~~~v~~~a~ 117 (210)
T 4db6_A 92 VIDAGALPALVQLLSSPNEQILQEAL 117 (210)
T ss_dssp HHHTTCHHHHHHHTTCSCHHHHHHHH
T ss_pred HHHCCCHHHHHHHHcCCcHHHHHHHH
Confidence 99999999999999999988766553
No 2
>3l6x_A Catenin delta-1; catenin, armadillo, ARM, JMD, CE adhesion, complex, cell-CELL adhesion, ARVCF, delta-catenin DP120, JAC-1, cell membrane, membrane; 2.40A {Homo sapiens} PDB: 3l6y_A
Probab=99.39 E-value=3.4e-13 Score=118.86 Aligned_cols=115 Identities=17% Similarity=0.229 Sum_probs=98.7
Q ss_pred cHHHHHHhhCCCCCChHHHHHHHHHHhhcCChHHHHHHHHHHhhhhcc-CCCcHHHHHhhcchhHHHHhhcCCcHHHHHH
Q 033071 4 NNQRQEERTGRSGTPRLQYLQELVSQFQNSTDEERKEKIVANLANFAY-DPYNYTFLRQLNVLELFLDCITEPNEKLVEF 82 (128)
Q Consensus 4 s~~~l~~Rtg~~g~~R~eyLq~LV~Efq~t~~~eakeqvlAnLaNFAy-DP~N~~~Lrql~vidlFld~L~~~n~~l~ef 82 (128)
|-.++.||.++.+.-|..-|+.||.-. .+++.+.|++.+..|.|.++ ++.|...+++.|+|+.|+++|.++++.+++.
T Consensus 31 ~~~~~~~~~~~~~~~~~~~i~~LV~~L-~s~~~~~q~~Aa~~L~~La~~~~~~k~~V~~~G~Ip~LV~LL~s~~~~vq~~ 109 (584)
T 3l6x_A 31 SLDSLRKGGPPPPNWRQPELPEVIAML-GFRLDAVKSNAAAYLQHLCYRNDKVKTDVRKLKGIPVLVGLLDHPKKEVHLG 109 (584)
T ss_dssp ---------CCCCCCCCCCHHHHHHHT-TCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHGGGCSSHHHHHH
T ss_pred HHHHHHhcCCCCCCcccccHHHHHHHH-CCCCHHHHHHHHHHHHHHHcCChHHHHHHHHcCCcHHHHHHHCCCCHHHHHH
Confidence 334667777888888999999999988 56788999999999999998 8999999999999999999999999999999
Q ss_pred Hhhhhhhccc--ChhhHHHHHhcCChhhHHhhhcCC-Chh
Q 033071 83 GVGGICNASV--DPANAAIITKSGGIPLIIECLSSP-VRN 119 (128)
Q Consensus 83 aiggLcNlcl--Dp~n~~~I~~~ggi~~i~~~LsS~-~e~ 119 (128)
|+++|.||+. +++||..|++.||||.++.+|+++ +++
T Consensus 110 Aa~AL~nLa~~~~~~nk~~I~~~GaIp~LV~LL~s~~~~~ 149 (584)
T 3l6x_A 110 ACGALKNISFGRDQDNKIAIKNCDGVPALVRLLRKARDMD 149 (584)
T ss_dssp HHHHHHHHTSSSCHHHHHHHHHTTHHHHHHHHHHHCCSHH
T ss_pred HHHHHHHHHccCCHHHHHHHHHcCCHHHHHHHHcCCCCHH
Confidence 9999999998 499999999999999999999985 444
No 3
>3tt9_A Plakophilin-2; cell adhesion; 1.55A {Homo sapiens}
Probab=99.38 E-value=5.5e-13 Score=105.40 Aligned_cols=100 Identities=17% Similarity=0.216 Sum_probs=87.1
Q ss_pred HHHHHHHhhcCChH--HHHHHHHHHhhhhcc-CCCcHHHHHhhcchhHHHHhhcCCcHHHHHHHhhhhhhcccC-hhhHH
Q 033071 23 LQELVSQFQNSTDE--ERKEKIVANLANFAY-DPYNYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNASVD-PANAA 98 (128)
Q Consensus 23 Lq~LV~Efq~t~~~--eakeqvlAnLaNFAy-DP~N~~~Lrql~vidlFld~L~~~n~~l~efaiggLcNlclD-p~n~~ 98 (128)
|+.||.-.+ +++. +.|...++-|.|.++ ||.|+..+++.|+|+.|+++|.++++.+++.|+++|.||+.+ ++||.
T Consensus 10 i~~lV~lL~-s~~~~~~~q~~Aa~~l~~L~~~~~~~r~~I~~~G~Ip~LV~lL~s~~~~vq~~Aa~aL~nLa~~~~~nk~ 88 (233)
T 3tt9_A 10 LERAVSMLE-ADHMLPSRISAAATFIQHECFQKSEARKRVNQLRGILKLLQLLKVQNEDVQRAVCGALRNLVFEDNDNKL 88 (233)
T ss_dssp HHHHHHTCC-SSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHTTHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHhC-CCCchHHHHHHHHHHHHHHHcCCcHHHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCHHHHH
Confidence 567888774 4444 777788889999996 799999999999999999999999999999999999999984 99999
Q ss_pred HHHhcCChhhHHhhhc-CCChhhhhh
Q 033071 99 IITKSGGIPLIIECLS-SPVRNTVNQ 123 (128)
Q Consensus 99 ~I~~~ggi~~i~~~Ls-S~~e~tVl~ 123 (128)
.|.+.||||+++++|+ ++++++.-.
T Consensus 89 ~I~~~GaI~~Lv~lL~~~~~~~~~e~ 114 (233)
T 3tt9_A 89 EVAELNGVPRLLQVLKQTRDLETKKQ 114 (233)
T ss_dssp HHHHTTHHHHHHHHHHHCCCHHHHHH
T ss_pred HHHHcCCHHHHHHHHccCCCHHHHHH
Confidence 9999999999999998 456665433
No 4
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene}
Probab=99.37 E-value=2e-12 Score=93.95 Aligned_cols=104 Identities=17% Similarity=0.228 Sum_probs=95.9
Q ss_pred HHHHHHHHHhhcCChHHHHHHHHHHhhhhccC-CCcHHHHHhhcchhHHHHhhcCCcHHHHHHHhhhhhhcc-cChhhHH
Q 033071 21 QYLQELVSQFQNSTDEERKEKIVANLANFAYD-PYNYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNAS-VDPANAA 98 (128)
Q Consensus 21 eyLq~LV~Efq~t~~~eakeqvlAnLaNFAyD-P~N~~~Lrql~vidlFld~L~~~n~~l~efaiggLcNlc-lDp~n~~ 98 (128)
+.++.|+.-.+ +++.+.+++++..|+|++.+ |.+...+.+.++++.++.+|.++++.+++.|+++|+|+| -++++++
T Consensus 44 g~i~~L~~ll~-~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~l~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~ 122 (252)
T 4hxt_A 44 GGVEVLVKLLT-STDSEVQKEAARALANIASGPDEAIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGPDEAIK 122 (252)
T ss_dssp THHHHHHHHTT-CSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCSSHHHHHHHHHHHHHHTTSCHHHHH
T ss_pred CCHHHHHHHHh-CCCHHHHHHHHHHHHHHHcCChHHHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCHHHHH
Confidence 56788888774 45699999999999999999 999999999999999999999999999999999999999 7899999
Q ss_pred HHHhcCChhhHHhhhcCCChhhhhhcc
Q 033071 99 IITKSGGIPLIIECLSSPVRNTVNQRF 125 (128)
Q Consensus 99 ~I~~~ggi~~i~~~LsS~~e~tVl~a~ 125 (128)
.+++.|+++.++++|+++++++...|+
T Consensus 123 ~~~~~~~i~~L~~~l~~~~~~~~~~a~ 149 (252)
T 4hxt_A 123 AIVDAGGVEVLVKLLTSTDSEVQKEAA 149 (252)
T ss_dssp HHHHTTHHHHHHHHTTCSCHHHHHHHH
T ss_pred HHHHCCCHHHHHHHHcCCCHHHHHHHH
Confidence 999999999999999999988876664
No 5
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct}
Probab=99.36 E-value=2.2e-12 Score=95.09 Aligned_cols=104 Identities=17% Similarity=0.306 Sum_probs=94.5
Q ss_pred HHHHHHHHHhhcCChHHHHHHHHHHhhhhcc-CCCcHHHHHhhcchhHHHHhhcCCcHHHHHHHhhhhhhcccChhhH-H
Q 033071 21 QYLQELVSQFQNSTDEERKEKIVANLANFAY-DPYNYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNASVDPANA-A 98 (128)
Q Consensus 21 eyLq~LV~Efq~t~~~eakeqvlAnLaNFAy-DP~N~~~Lrql~vidlFld~L~~~n~~l~efaiggLcNlclDp~n~-~ 98 (128)
+.++.||.-.+. ++.+.+++++..|+|++. +|.|...+.+.|+++.++.+|.++++.+++.|+++|+|+|.++.++ +
T Consensus 54 g~i~~L~~lL~~-~~~~v~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~ 132 (252)
T 4db8_A 54 GALPALVQLLSS-PNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQ 132 (252)
T ss_dssp THHHHHHHGGGC-SCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHHH
T ss_pred CcHHHHHHHHcC-CCHHHHHHHHHHHHHHhcCCHHHHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHhhcCCchHHH
Confidence 467788887754 458999999999999998 7999999999999999999999999999999999999999999998 9
Q ss_pred HHHhcCChhhHHhhhcCCChhhhhhcc
Q 033071 99 IITKSGGIPLIIECLSSPVRNTVNQRF 125 (128)
Q Consensus 99 ~I~~~ggi~~i~~~LsS~~e~tVl~a~ 125 (128)
.+++.|+++.++.+|+++++++...|+
T Consensus 133 ~~~~~~~i~~L~~lL~~~~~~v~~~a~ 159 (252)
T 4db8_A 133 AVIDAGALPALVQLLSSPNEQILQEAL 159 (252)
T ss_dssp HHHHTTHHHHHHHGGGCSCHHHHHHHH
T ss_pred HHHHCCCHHHHHHHHhCCCHHHHHHHH
Confidence 999999999999999999887766553
No 6
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A
Probab=99.35 E-value=3.4e-12 Score=92.02 Aligned_cols=104 Identities=18% Similarity=0.311 Sum_probs=93.6
Q ss_pred HHHHHHHHHhhcCChHHHHHHHHHHhhhhcc-CCCcHHHHHhhcchhHHHHhhcCCcHHHHHHHhhhhhhccc-ChhhHH
Q 033071 21 QYLQELVSQFQNSTDEERKEKIVANLANFAY-DPYNYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNASV-DPANAA 98 (128)
Q Consensus 21 eyLq~LV~Efq~t~~~eakeqvlAnLaNFAy-DP~N~~~Lrql~vidlFld~L~~~n~~l~efaiggLcNlcl-Dp~n~~ 98 (128)
+.++.||.-.+ +++.+.+++++..|+|++. +|.+...+.+.++++.++.+|.++++.+++.|+++|+|+|. ++..++
T Consensus 54 g~i~~L~~lL~-~~~~~v~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~ 132 (210)
T 4db6_A 54 GALPALVQLLS-SPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQ 132 (210)
T ss_dssp THHHHHHHHTT-CSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHH
T ss_pred CCHHHHHHHHc-CCCHHHHHHHHHHHHHHhcCCcHHHHHHHHCCCHHHHHHHHcCCcHHHHHHHHHHHHHHHcCCHHHHH
Confidence 56788888874 4578999999999999994 78999999999999999999999999999999999999995 588888
Q ss_pred HHHhcCChhhHHhhhcCCChhhhhhcc
Q 033071 99 IITKSGGIPLIIECLSSPVRNTVNQRF 125 (128)
Q Consensus 99 ~I~~~ggi~~i~~~LsS~~e~tVl~a~ 125 (128)
.+++.|+++.++++|+++++++...|+
T Consensus 133 ~~~~~~~i~~L~~ll~~~~~~v~~~a~ 159 (210)
T 4db6_A 133 AVIDAGALPALVQLLSSPNEQILQEAL 159 (210)
T ss_dssp HHHHTTHHHHHHHHTTCSCHHHHHHHH
T ss_pred HHHHcCcHHHHHHHHcCCCHHHHHHHH
Confidence 999999999999999999888776654
No 7
>1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24
Probab=99.34 E-value=4.5e-12 Score=104.99 Aligned_cols=101 Identities=16% Similarity=0.185 Sum_probs=90.0
Q ss_pred HHHHHHHhhcCChHHHHHHHHHHhhhhccC-CCcHHHHHhhcchhHHHHhhcCCcHHHHHHHhhhhhhcccC-hhhHHHH
Q 033071 23 LQELVSQFQNSTDEERKEKIVANLANFAYD-PYNYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNASVD-PANAAII 100 (128)
Q Consensus 23 Lq~LV~Efq~t~~~eakeqvlAnLaNFAyD-P~N~~~Lrql~vidlFld~L~~~n~~l~efaiggLcNlclD-p~n~~~I 100 (128)
|+.||.-. .+++.+.|++.+..|.|++++ |.++..+.+.|+++.++.+|.++++.+++.|+++|.||+.+ ++++..|
T Consensus 4 l~~lv~~L-~s~~~~~q~~A~~~L~~l~~~~~~~~~~i~~~g~i~~Lv~lL~s~~~~~~~~A~~aL~nLa~~~~~~k~~i 82 (457)
T 1xm9_A 4 IPKAVQYL-SSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 82 (457)
T ss_dssp HHHHHHHH-HSSCTHHHHHHHHHHHHHTSSCSSHHHHHHHTTHHHHHHHHTTSSCHHHHHHHHHHHHHHHSSCHHHHHHH
T ss_pred HHHHHHHH-CCCCHHHHHHHHHHHHHHHcCChHHHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCHHHHHHH
Confidence 56778766 566789999999999999976 56687999999999999999999999999999999999998 9999999
Q ss_pred HhcCChhhHHhhhc-CCChhhhhhc
Q 033071 101 TKSGGIPLIIECLS-SPVRNTVNQR 124 (128)
Q Consensus 101 ~~~ggi~~i~~~Ls-S~~e~tVl~a 124 (128)
++.||||.++++|+ |+++++.-.|
T Consensus 83 ~~~G~i~~Lv~lL~~~~~~~~~~~a 107 (457)
T 1xm9_A 83 RRQNGIREAVSLLRRTGNAEIQKQL 107 (457)
T ss_dssp HHTTCHHHHHHHHTTCCCHHHHHHH
T ss_pred HHcCCHHHHHHHHhhCCCHHHHHHH
Confidence 99999999999999 8777765443
No 8
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct}
Probab=99.29 E-value=1.7e-11 Score=90.30 Aligned_cols=104 Identities=17% Similarity=0.306 Sum_probs=94.3
Q ss_pred HHHHHHHHHhhcCChHHHHHHHHHHhhhhccCCCcH-HHHHhhcchhHHHHhhcCCcHHHHHHHhhhhhhccc-ChhhHH
Q 033071 21 QYLQELVSQFQNSTDEERKEKIVANLANFAYDPYNY-TFLRQLNVLELFLDCITEPNEKLVEFGVGGICNASV-DPANAA 98 (128)
Q Consensus 21 eyLq~LV~Efq~t~~~eakeqvlAnLaNFAyDP~N~-~~Lrql~vidlFld~L~~~n~~l~efaiggLcNlcl-Dp~n~~ 98 (128)
+.++.|+.-.+. ++.+.+++++..|+|++.++.+. ..+.+.++++.++++|.++++.+++.|+++|+|+|. ++.+++
T Consensus 96 g~i~~L~~lL~~-~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~ 174 (252)
T 4db8_A 96 GALPALVQLLSS-PNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQ 174 (252)
T ss_dssp THHHHHHHGGGC-SCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHHH
T ss_pred CCHHHHHHHHcC-CCHHHHHHHHHHHHHhhcCCchHHHHHHHCCCHHHHHHHHhCCCHHHHHHHHHHHHHHHcCChHHHH
Confidence 467888887754 67899999999999999999999 999999999999999999999999999999999997 578889
Q ss_pred HHHhcCChhhHHhhhcCCChhhhhhcc
Q 033071 99 IITKSGGIPLIIECLSSPVRNTVNQRF 125 (128)
Q Consensus 99 ~I~~~ggi~~i~~~LsS~~e~tVl~a~ 125 (128)
.+++.|+++.++++|+++++++...|+
T Consensus 175 ~~~~~~~i~~L~~ll~~~~~~v~~~a~ 201 (252)
T 4db8_A 175 AVIDAGALPALVQLLSSPNEQILQEAL 201 (252)
T ss_dssp HHHHTTCHHHHHHGGGCSSHHHHHHHH
T ss_pred HHHHCCCHHHHHHHHCCCCHHHHHHHH
Confidence 999999999999999999888766553
No 9
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene}
Probab=99.28 E-value=1.4e-11 Score=89.40 Aligned_cols=103 Identities=17% Similarity=0.287 Sum_probs=93.0
Q ss_pred HHHHHHHHhhcCChHHHHHHHHHHhhhhccCC-CcHHHHHhhcchhHHHHhhcCCcHHHHHHHhhhhhhcccC-hhhHHH
Q 033071 22 YLQELVSQFQNSTDEERKEKIVANLANFAYDP-YNYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNASVD-PANAAI 99 (128)
Q Consensus 22 yLq~LV~Efq~t~~~eakeqvlAnLaNFAyDP-~N~~~Lrql~vidlFld~L~~~n~~l~efaiggLcNlclD-p~n~~~ 99 (128)
-++.||.-.+. ++.+.|.+++..|+|++.+. .|...+.+.++++.++.+|.++++.+++.|+.+|+|++.+ +++++.
T Consensus 3 ~i~~L~~~L~~-~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~g~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~ 81 (252)
T 4hxt_A 3 DVEKLVKLLTS-TDSETQKEAARDLAEIASGPASAIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGPDEAIKA 81 (252)
T ss_dssp HHHHHHHHTTC-SCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHH
T ss_pred cHHHHHHHHcC-CCHHHHHHHHHHHHHHhcCCcHHHHHHHHCCCHHHHHHHHhCCCHHHHHHHHHHHHHHHcCChHHHHH
Confidence 36788888854 45899999999999999775 5999999999999999999999999999999999999998 999999
Q ss_pred HHhcCChhhHHhhhcCCChhhhhhcc
Q 033071 100 ITKSGGIPLIIECLSSPVRNTVNQRF 125 (128)
Q Consensus 100 I~~~ggi~~i~~~LsS~~e~tVl~a~ 125 (128)
+.+.|+++.++.+|+++++++...|+
T Consensus 82 ~~~~~~i~~l~~ll~~~~~~v~~~a~ 107 (252)
T 4hxt_A 82 IVDAGGVEVLVKLLTSTDSEVQKEAA 107 (252)
T ss_dssp HHHTTHHHHHHHHTTCSSHHHHHHHH
T ss_pred HHHCCCHHHHHHHHcCCCHHHHHHHH
Confidence 99999999999999999988776553
No 10
>1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24
Probab=99.24 E-value=9.5e-12 Score=103.03 Aligned_cols=94 Identities=15% Similarity=0.180 Sum_probs=88.2
Q ss_pred hHHHHHHHHHHhhcCChHHHHHHHHHHhhhhccC-CCcHHHHHhhcchhHHHHhhc-CCcHHHHHHHhhhhhhcccChhh
Q 033071 19 RLQYLQELVSQFQNSTDEERKEKIVANLANFAYD-PYNYTFLRQLNVLELFLDCIT-EPNEKLVEFGVGGICNASVDPAN 96 (128)
Q Consensus 19 R~eyLq~LV~Efq~t~~~eakeqvlAnLaNFAyD-P~N~~~Lrql~vidlFld~L~-~~n~~l~efaiggLcNlclDp~n 96 (128)
..+.++.||.-.+ +++.+.|++.+..|.|.+++ |.|...+.+.|+++.|+.+|. ++++.+++.|++.|+|||.++++
T Consensus 42 ~~g~i~~Lv~lL~-s~~~~~~~~A~~aL~nLa~~~~~~k~~i~~~G~i~~Lv~lL~~~~~~~~~~~a~~aL~nLa~~~~~ 120 (457)
T 1xm9_A 42 QLGGICKLVDLLR-SPNQNVQQAAAGALRNLVFRSTTNKLETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDEL 120 (457)
T ss_dssp HTTHHHHHHHHTT-SSCHHHHHHHHHHHHHHHSSCHHHHHHHHHTTCHHHHHHHHTTCCCHHHHHHHHHHHHHHHTSSST
T ss_pred HcCCHHHHHHHHc-CCCHHHHHHHHHHHHHHhcCCHHHHHHHHHcCCHHHHHHHHhhCCCHHHHHHHHHHHHHHhcCHHh
Confidence 4567899999885 78889999999999999998 999999999999999999999 88999999999999999999999
Q ss_pred HHHHHhcCChhhHHhhhc
Q 033071 97 AAIITKSGGIPLIIECLS 114 (128)
Q Consensus 97 ~~~I~~~ggi~~i~~~Ls 114 (128)
+..|++ ||||.++.+|.
T Consensus 121 ~~~i~~-g~i~~Lv~ll~ 137 (457)
T 1xm9_A 121 KEELIA-DALPVLADRVI 137 (457)
T ss_dssp HHHHHH-HHHHHHHHHTT
T ss_pred HHHHHh-ccHHHHHHHHh
Confidence 999999 99999999993
No 11
>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A
Probab=99.24 E-value=1.3e-11 Score=101.46 Aligned_cols=105 Identities=17% Similarity=0.182 Sum_probs=93.9
Q ss_pred HHHHHHHHHHhhcCChH---HHHHHHHHHhhhhcc----CCCcHHHHHhhcchhHHHHhhcCCcHHHHHHHhhhhhhccc
Q 033071 20 LQYLQELVSQFQNSTDE---ERKEKIVANLANFAY----DPYNYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNASV 92 (128)
Q Consensus 20 ~eyLq~LV~Efq~t~~~---eakeqvlAnLaNFAy----DP~N~~~Lrql~vidlFld~L~~~n~~l~efaiggLcNlcl 92 (128)
.+.|..||.-.+..+.. +.++.++.-|+|.+. +|.|...+++.|+++.++++|.++++.+++.|++.|+|||.
T Consensus 213 ~Gai~~Lv~lL~~~~~~~~~~v~~~A~~aL~nLs~~~a~~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~A~~aL~nLa~ 292 (354)
T 3nmw_A 213 DGALAFLVGTLTYRSQTNTLAIIESGGGILRNVSSLIATNEDHRQILRENNCLQTLLQHLKSHSLTIVSNACGTLWNLSA 292 (354)
T ss_dssp TTHHHHHHHHTTCCCSSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHTTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTS
T ss_pred cCcHHHHHHHhccCCCcccHHHHHHHHHHHHHHHhhccCCHHHHHHHHHcCCHHHHHHHHcCCChHHHHHHHHHHHHHhC
Confidence 45788899988655443 689999999999985 99999999999999999999999999999999999999995
Q ss_pred -ChhhHHHHHhcCChhhHHhhhcCCChhhhhhc
Q 033071 93 -DPANAAIITKSGGIPLIIECLSSPVRNTVNQR 124 (128)
Q Consensus 93 -Dp~n~~~I~~~ggi~~i~~~LsS~~e~tVl~a 124 (128)
|+++++.|++.|+||.++++|+|+++.+...|
T Consensus 293 ~~~~~~~~i~~~G~i~~Lv~LL~s~~~~i~~~A 325 (354)
T 3nmw_A 293 RNPKDQEALWDMGAVSMLKNLIHSKHKMIAMGS 325 (354)
T ss_dssp SCHHHHHHHHHTTHHHHHHTTTTCSSHHHHHHH
T ss_pred CCHHHHHHHHHCCCHHHHHHHHhCCCHHHHHHH
Confidence 89999999999999999999999999876554
No 12
>3tt9_A Plakophilin-2; cell adhesion; 1.55A {Homo sapiens}
Probab=99.22 E-value=1e-11 Score=98.11 Aligned_cols=95 Identities=15% Similarity=0.194 Sum_probs=86.4
Q ss_pred ChHHHHHHHHHHhhcCChHHHHHHHHHHhhhhcc-CCCcHHHHHhhcchhHHHHhhc-CCcHHHHHHHhhhhhhcccChh
Q 033071 18 PRLQYLQELVSQFQNSTDEERKEKIVANLANFAY-DPYNYTFLRQLNVLELFLDCIT-EPNEKLVEFGVGGICNASVDPA 95 (128)
Q Consensus 18 ~R~eyLq~LV~Efq~t~~~eakeqvlAnLaNFAy-DP~N~~~Lrql~vidlFld~L~-~~n~~l~efaiggLcNlclDp~ 95 (128)
-+.+.|+.||.-. .+++.+.|++.+..|.|.++ ++.|...+.+.|+|+.++.+|. .+++.++|.|+|.||||+..+.
T Consensus 49 ~~~G~Ip~LV~lL-~s~~~~vq~~Aa~aL~nLa~~~~~nk~~I~~~GaI~~Lv~lL~~~~~~~~~e~a~~aL~nLS~~~~ 127 (233)
T 3tt9_A 49 NQLRGILKLLQLL-KVQNEDVQRAVCGALRNLVFEDNDNKLEVAELNGVPRLLQVLKQTRDLETKKQITGLLWNLSSNDK 127 (233)
T ss_dssp HHTTHHHHHHHGG-GCCCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHHCCCHHHHHHHHHHHHHHHTSGG
T ss_pred HHcCCHHHHHHHH-cCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHcCCHHHHHHHHccCCCHHHHHHHHHHHHHHHcChh
Confidence 3456789999988 67899999999999999999 5999999999999999999998 5789999999999999999999
Q ss_pred hHHHHHhcCChhhHHhhhc
Q 033071 96 NAAIITKSGGIPLIIECLS 114 (128)
Q Consensus 96 n~~~I~~~ggi~~i~~~Ls 114 (128)
+|..|.+ +|||.++++|.
T Consensus 128 ~k~~i~~-~~i~~Lv~ll~ 145 (233)
T 3tt9_A 128 LKNLMIT-EALLTLTENII 145 (233)
T ss_dssp GHHHHHH-HHHHHHCCCCC
T ss_pred hHHHHHh-ccHHHHHHHHh
Confidence 9999998 47999998764
No 13
>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ...
Probab=99.21 E-value=4.1e-11 Score=100.04 Aligned_cols=101 Identities=18% Similarity=0.200 Sum_probs=92.9
Q ss_pred HHHHHHHHHHhhcCChHHHHHHHHHHhhhhcc-CCCcHHHHHhhcchhHHHHhhcCCcHHHHHHHhhhhhhcccC-hhhH
Q 033071 20 LQYLQELVSQFQNSTDEERKEKIVANLANFAY-DPYNYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNASVD-PANA 97 (128)
Q Consensus 20 ~eyLq~LV~Efq~t~~~eakeqvlAnLaNFAy-DP~N~~~Lrql~vidlFld~L~~~n~~l~efaiggLcNlclD-p~n~ 97 (128)
.+-+..||.-.+.+++.+.|..++..|+|.|. +|.|...+.+.|+++.|+.+|.++++.+++.|+.+|+|+|.| |.++
T Consensus 99 ~G~ip~LV~lL~~~~~~~lq~~Aa~aL~nias~~~e~~~~vv~~GaIp~Lv~lL~s~~~~v~e~A~~aL~nLa~d~~~~r 178 (510)
T 3ul1_B 99 AGLIPKFVSFLGKTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGDGSAFR 178 (510)
T ss_dssp TTHHHHHHHHTTCTTCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHH
T ss_pred CCCHHHHHHHHCCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCHHHH
Confidence 34678899989888889999999999999987 588999999999999999999999999999999999999998 8999
Q ss_pred HHHHhcCChhhHHhhhcCCChhh
Q 033071 98 AIITKSGGIPLIIECLSSPVRNT 120 (128)
Q Consensus 98 ~~I~~~ggi~~i~~~LsS~~e~t 120 (128)
+.|++.|+++.++.+|++++.++
T Consensus 179 ~~v~~~G~i~~Ll~lL~~~~~~~ 201 (510)
T 3ul1_B 179 DLVIKHGAIDPLLALLAVPDLST 201 (510)
T ss_dssp HHHHHTTCHHHHHHHTCSSCGGG
T ss_pred HHHHHcCChHHHHHHHHhccchh
Confidence 99999999999999999987653
No 14
>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A
Probab=99.17 E-value=3.4e-11 Score=99.00 Aligned_cols=105 Identities=15% Similarity=0.183 Sum_probs=93.6
Q ss_pred HHHHHHHHHHhhcCChHHHHHHHHHHhhhhcc-CCCcHHHHH-hhcchhHHHHhhcCCcH----HHHHHHhhhhhhccc-
Q 033071 20 LQYLQELVSQFQNSTDEERKEKIVANLANFAY-DPYNYTFLR-QLNVLELFLDCITEPNE----KLVEFGVGGICNASV- 92 (128)
Q Consensus 20 ~eyLq~LV~Efq~t~~~eakeqvlAnLaNFAy-DP~N~~~Lr-ql~vidlFld~L~~~n~----~l~efaiggLcNlcl- 92 (128)
.+-++.||.-...+++.+.++.++..|+|.++ ++.|...+. ..|+++.++.+|..+++ .+++.|+|.|+|||.
T Consensus 169 ~G~Ip~Lv~lL~~~~~~~~~~~A~~aL~nLs~~~~~nk~~i~~~~Gai~~Lv~lL~~~~~~~~~~v~~~A~~aL~nLs~~ 248 (354)
T 3nmw_A 169 VGSVKALMECALEVKKESTLKSVLSALWNLSAHCTENKADICAVDGALAFLVGTLTYRSQTNTLAIIESGGGILRNVSSL 248 (354)
T ss_dssp TTHHHHHHHHHHHCCCHHHHHHHHHHHHHHHTTCHHHHHHHHHSTTHHHHHHHHTTCCCSSSCCHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHhcCCCHHHHHHHHHHHHHHHccChhhhHHHHHhcCcHHHHHHHhccCCCcccHHHHHHHHHHHHHHHhh
Confidence 35688999977778889999999999999999 778888887 78999999999998765 499999999999995
Q ss_pred ---ChhhHHHHHhcCChhhHHhhhcCCChhhhhhc
Q 033071 93 ---DPANAAIITKSGGIPLIIECLSSPVRNTVNQR 124 (128)
Q Consensus 93 ---Dp~n~~~I~~~ggi~~i~~~LsS~~e~tVl~a 124 (128)
++++++.|++.|+||.++.+|++++.+++..|
T Consensus 249 ~a~~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~A 283 (354)
T 3nmw_A 249 IATNEDHRQILRENNCLQTLLQHLKSHSLTIVSNA 283 (354)
T ss_dssp HTTCHHHHHHHHTTTHHHHHHHHTTCSCHHHHHHH
T ss_pred ccCCHHHHHHHHHcCCHHHHHHHHcCCChHHHHHH
Confidence 89999999999999999999999988876655
No 15
>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B
Probab=99.15 E-value=1.1e-10 Score=97.51 Aligned_cols=102 Identities=18% Similarity=0.197 Sum_probs=92.9
Q ss_pred hHHHHHHHHHHhhcCChHHHHHHHHHHhhhhccC-CCcHHHHHhhcchhHHHHhhcCCcHHHHHHHhhhhhhcccC-hhh
Q 033071 19 RLQYLQELVSQFQNSTDEERKEKIVANLANFAYD-PYNYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNASVD-PAN 96 (128)
Q Consensus 19 R~eyLq~LV~Efq~t~~~eakeqvlAnLaNFAyD-P~N~~~Lrql~vidlFld~L~~~n~~l~efaiggLcNlclD-p~n 96 (128)
+.+-+..||.-.+.+++.+.|..++..|+|+|.. +.+...+.+.|+++.|+.+|.++++.+++.|+.+|+|+|.| |++
T Consensus 117 ~~G~ip~Lv~lL~~~~~~~~q~~Aa~aL~nia~~~~~~~~~vv~~Gaip~Lv~LL~s~~~~v~e~A~~aL~nLa~~~~~~ 196 (529)
T 3tpo_A 117 RAGLIPKFVSFLGKTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGAGSAF 196 (529)
T ss_dssp HTTHHHHHHHHHTCTTCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHH
T ss_pred HCCCHHHHHHHHcCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHhccCHHH
Confidence 3456788999898888899999999999999974 77888999999999999999999999999999999999987 899
Q ss_pred HHHHHhcCChhhHHhhhcCCChhh
Q 033071 97 AAIITKSGGIPLIIECLSSPVRNT 120 (128)
Q Consensus 97 ~~~I~~~ggi~~i~~~LsS~~e~t 120 (128)
++.|++.|+++.++.+|++++..+
T Consensus 197 r~~i~~~g~i~~Ll~lL~~~~~~~ 220 (529)
T 3tpo_A 197 RDLVIKHGAIDPLLALLAVPDLST 220 (529)
T ss_dssp HHHHHHTTCHHHHHHTTCSSCGGG
T ss_pred HHHHHHcCCcHHHHHHHhccchhH
Confidence 999999999999999999887553
No 16
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens}
Probab=99.13 E-value=1.4e-10 Score=98.48 Aligned_cols=91 Identities=25% Similarity=0.313 Sum_probs=86.6
Q ss_pred ChHHHHHHHHHHhhhhccCCCcHHHHHhhcchhHHHHhhcCCcHHHHHHHhhhhhhcccChhhHHHHHhcCChhhHHhhh
Q 033071 34 TDEERKEKIVANLANFAYDPYNYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNASVDPANAAIITKSGGIPLIIECL 113 (128)
Q Consensus 34 ~~~eakeqvlAnLaNFAyDP~N~~~Lrql~vidlFld~L~~~n~~l~efaiggLcNlclDp~n~~~I~~~ggi~~i~~~L 113 (128)
++++.++.++..|+|++.++.|...+++.++++.|+++|.++++.++..|+++|+|++-|++.++.|.+.||++.|..++
T Consensus 428 ~~~~v~~~a~~aL~~La~~~~~~~~l~~~~~i~~Lv~lL~~~~~~v~~~a~~aL~~l~~~~~~~~~i~~~g~l~~L~~ll 507 (644)
T 2z6h_A 428 RMEEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCELAQDKEAAEAIEAEGATAPLTELL 507 (644)
T ss_dssp CHHHHHHHHHHHHHHHTTSHHHHHHHHHTTCHHHHHHHTTCSCHHHHHHHHHHHHHHHTSHHHHHHHHHTTCHHHHHHHT
T ss_pred cHHHHHHHHHHHHHHHhcCHHHHHHHHhCCcHHHHHHHHcCCCHHHHHHHHHHHHHHHcCHHHHHHHHHcCChhHHHHHH
Confidence 56788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCChhhhhhc
Q 033071 114 SSPVRNTVNQR 124 (128)
Q Consensus 114 sS~~e~tVl~a 124 (128)
+++++++...|
T Consensus 508 ~~~~~~vr~~A 518 (644)
T 2z6h_A 508 HSRNEGVATYA 518 (644)
T ss_dssp TCSCHHHHHHH
T ss_pred cCCCHHHHHHH
Confidence 99999986654
No 17
>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens}
Probab=99.13 E-value=7.3e-11 Score=100.70 Aligned_cols=105 Identities=17% Similarity=0.176 Sum_probs=93.6
Q ss_pred HHHHHHHHHHhhcCChH---HHHHHHHHHhhhhcc----CCCcHHHHHhhcchhHHHHhhcCCcHHHHHHHhhhhhhcc-
Q 033071 20 LQYLQELVSQFQNSTDE---ERKEKIVANLANFAY----DPYNYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNAS- 91 (128)
Q Consensus 20 ~eyLq~LV~Efq~t~~~---eakeqvlAnLaNFAy----DP~N~~~Lrql~vidlFld~L~~~n~~l~efaiggLcNlc- 91 (128)
.+.|..||.-.+..++. +.++.+++-|+|.+. +|.|...+++.|+++.++.+|.++++.+++.|++.|+|||
T Consensus 329 ~Gal~~Lv~LL~~~~~~~~~~v~~~A~~aL~nLs~~~a~~~~~~~~i~~~G~i~~Lv~LL~~~~~~v~~~A~~aL~nLa~ 408 (458)
T 3nmz_A 329 DGALAFLVGTLTYRSQTNTLAIIESGGGILRNVSSLIATNEDHRQILRENNCLQTLLQHLKSHSLTIVSNACGTLWNLSA 408 (458)
T ss_dssp TTHHHHHHHHTTCCCSSSTTHHHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHSSCSCHHHHHHHHHHHHHHHS
T ss_pred cCcHHHHHHHhcCCCCcchHHHHHHHHHHHHHHHhcccCCHHHHHHHHHcccHHHHHHHHcCCChHHHHHHHHHHHHHHc
Confidence 45788889888655443 689999998888884 9999999999999999999999999999999999999999
Q ss_pred cChhhHHHHHhcCChhhHHhhhcCCChhhhhhc
Q 033071 92 VDPANAAIITKSGGIPLIIECLSSPVRNTVNQR 124 (128)
Q Consensus 92 lDp~n~~~I~~~ggi~~i~~~LsS~~e~tVl~a 124 (128)
-|+++++.|++.|+||.++++|+++++.+...|
T Consensus 409 ~~~~~~~~i~~~G~I~~Lv~LL~s~~~~v~~~A 441 (458)
T 3nmz_A 409 RNPKDQEALWDMGAVSMLKNLIHSKHKMIAMGS 441 (458)
T ss_dssp SCHHHHHHHHHHTHHHHHHTTTTCSSHHHHHHH
T ss_pred CCHHHHHHHHHCCCHHHHHHHHhCCCHHHHHHH
Confidence 589999999999999999999999998876655
No 18
>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens}
Probab=99.12 E-value=1.2e-10 Score=99.38 Aligned_cols=98 Identities=20% Similarity=0.347 Sum_probs=88.6
Q ss_pred HHHHHHHHHhhcCChHHHHHHHHHHhhhhcc--CCCcHHHHHhhcchhHHHHhh-cCCcHHHHHHHhhhhhhccc-Chhh
Q 033071 21 QYLQELVSQFQNSTDEERKEKIVANLANFAY--DPYNYTFLRQLNVLELFLDCI-TEPNEKLVEFGVGGICNASV-DPAN 96 (128)
Q Consensus 21 eyLq~LV~Efq~t~~~eakeqvlAnLaNFAy--DP~N~~~Lrql~vidlFld~L-~~~n~~l~efaiggLcNlcl-Dp~n 96 (128)
+.|..||.-.+ +++.+.|+++...|.|.++ |+.|...+.+.|+++.++++| .++++.+++.|+++|||||. ++++
T Consensus 243 GaIp~LV~LL~-s~~~~v~~~A~~aL~nLs~~~~~~~k~~I~~~GaI~~LV~lLl~s~~~~v~~~A~~aL~nLs~~~~~n 321 (458)
T 3nmz_A 243 GCMRALVAQLK-SESEDLQQVIASVLRNLSWRADVNSKKTLREVGSVKALMECALEVKKESTLKSVLSALWNLSAHCTEN 321 (458)
T ss_dssp HHHHHHHHGGG-CSCHHHHHHHHHHHHHHTSSCCHHHHHHHHHTTHHHHHHHHHTTCCSHHHHHHHHHHHHHHHHHCHHH
T ss_pred CcHHHHHHHHh-CCCHHHHHHHHHHHHHHhcCCCHHHHHHHHHcCCHHHHHHHHhcCCCHHHHHHHHHHHHHHccCCHHH
Confidence 45899999885 7889999999999999999 488999999999999999985 55789999999999999998 8899
Q ss_pred HHHHH-hcCChhhHHhhhcCCChh
Q 033071 97 AAIIT-KSGGIPLIIECLSSPVRN 119 (128)
Q Consensus 97 ~~~I~-~~ggi~~i~~~LsS~~e~ 119 (128)
+..|. ..||||.++++|+++.+.
T Consensus 322 k~~I~~~~Gal~~Lv~LL~~~~~~ 345 (458)
T 3nmz_A 322 KADICAVDGALAFLVGTLTYRSQT 345 (458)
T ss_dssp HHHHHHSTTHHHHHHHHTTCCCSS
T ss_pred HHHHHHhcCcHHHHHHHhcCCCCc
Confidence 99998 799999999999988653
No 19
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A
Probab=99.12 E-value=1.2e-10 Score=93.52 Aligned_cols=100 Identities=13% Similarity=0.215 Sum_probs=93.4
Q ss_pred HHHHHHHHHhhcCChHHHHHHHHHHhhhhccCCCcHHHHHhhcchhHHHHhhcCCcHHHHHHHhhhhhhcccC-hhhHHH
Q 033071 21 QYLQELVSQFQNSTDEERKEKIVANLANFAYDPYNYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNASVD-PANAAI 99 (128)
Q Consensus 21 eyLq~LV~Efq~t~~~eakeqvlAnLaNFAyDP~N~~~Lrql~vidlFld~L~~~n~~l~efaiggLcNlclD-p~n~~~ 99 (128)
+.+..||.-.+.+++.+.++..+..|+|++.++.|...+.+.++++.++.+|.++++.+++.|+..|+|+|.+ +..++.
T Consensus 59 ~~i~~Lv~~L~~~~~~~~~~~a~~~L~~ls~~~~~~~~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~ 138 (529)
T 1jdh_A 59 QMVSAIVRTMQNTNDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMA 138 (529)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHHHHHHHHHTTSHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHCTTHHHH
T ss_pred chHHHHHHHHhcCCCHHHHHHHHHHHHHHHcCchhHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCcchHHH
Confidence 6889999998877789999999999999999999999999999999999999999999999999999999987 678888
Q ss_pred HHhcCChhhHHhhhcCCChhh
Q 033071 100 ITKSGGIPLIIECLSSPVRNT 120 (128)
Q Consensus 100 I~~~ggi~~i~~~LsS~~e~t 120 (128)
+.+.|+||.++++|++++.++
T Consensus 139 i~~~g~i~~L~~ll~~~~~~~ 159 (529)
T 1jdh_A 139 VRLAGGLQKMVALLNKTNVKF 159 (529)
T ss_dssp HHHHTHHHHHHHGGGCCCHHH
T ss_pred HHHcCCHHHHHHHHhcCCHHH
Confidence 989999999999999988665
No 20
>3l6x_A Catenin delta-1; catenin, armadillo, ARM, JMD, CE adhesion, complex, cell-CELL adhesion, ARVCF, delta-catenin DP120, JAC-1, cell membrane, membrane; 2.40A {Homo sapiens} PDB: 3l6y_A
Probab=99.10 E-value=1.4e-10 Score=102.37 Aligned_cols=93 Identities=15% Similarity=0.200 Sum_probs=85.8
Q ss_pred hHHHHHHHHHHhhcCChHHHHHHHHHHhhhhcc--CCCcHHHHHhhcchhHHHHhhcC-CcHHHHHHHhhhhhhcccChh
Q 033071 19 RLQYLQELVSQFQNSTDEERKEKIVANLANFAY--DPYNYTFLRQLNVLELFLDCITE-PNEKLVEFGVGGICNASVDPA 95 (128)
Q Consensus 19 R~eyLq~LV~Efq~t~~~eakeqvlAnLaNFAy--DP~N~~~Lrql~vidlFld~L~~-~n~~l~efaiggLcNlclDp~ 95 (128)
..+.|+.||.-. .+.+.+.|++.+..|.|.|+ |+.|...+++.|+|+.++.+|.+ +++.+++.|+++||||+.+++
T Consensus 88 ~~G~Ip~LV~LL-~s~~~~vq~~Aa~AL~nLa~~~~~~nk~~I~~~GaIp~LV~LL~s~~~~~~~e~aa~aL~nLS~~~~ 166 (584)
T 3l6x_A 88 KLKGIPVLVGLL-DHPKKEVHLGACGALKNISFGRDQDNKIAIKNCDGVPALVRLLRKARDMDLTEVITGTLWNLSSHDS 166 (584)
T ss_dssp HTTHHHHHHHGG-GCSSHHHHHHHHHHHHHHTSSSCHHHHHHHHHTTHHHHHHHHHHHCCSHHHHHHHHHHHHHHTTSGG
T ss_pred HcCCcHHHHHHH-CCCCHHHHHHHHHHHHHHHccCCHHHHHHHHHcCCHHHHHHHHcCCCCHHHHHHHHHHHHHHhCCch
Confidence 446788999988 67899999999999999999 49999999999999999999997 678899999999999999999
Q ss_pred hHHHHHhcCChhhHHhhh
Q 033071 96 NAAIITKSGGIPLIIECL 113 (128)
Q Consensus 96 n~~~I~~~ggi~~i~~~L 113 (128)
+|..|++ +|||.++++|
T Consensus 167 ~k~~I~~-~alp~Lv~LL 183 (584)
T 3l6x_A 167 IKMEIVD-HALHALTDEV 183 (584)
T ss_dssp GHHHHHH-HTHHHHHHHT
T ss_pred hhHHHHh-ccHHHHHHHH
Confidence 9999996 6899999987
No 21
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A
Probab=99.08 E-value=3.6e-10 Score=90.79 Aligned_cols=91 Identities=25% Similarity=0.305 Sum_probs=84.3
Q ss_pred hHHHHHHHHHHhhhhccCCCcHHHHHhhcchhHHHHhhcCCcHHHHHHHhhhhhhcccChhhHHHHHhcCChhhHHhhhc
Q 033071 35 DEERKEKIVANLANFAYDPYNYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNASVDPANAAIITKSGGIPLIIECLS 114 (128)
Q Consensus 35 ~~eakeqvlAnLaNFAyDP~N~~~Lrql~vidlFld~L~~~n~~l~efaiggLcNlclDp~n~~~I~~~ggi~~i~~~Ls 114 (128)
.++.++.++..|+|++.+|.|...+++.++++.++++|.++++.+++.|.++|+|++-|+..++.|.+.||++.|..+++
T Consensus 432 ~~~i~~~~~~al~~L~~~~~~~~~l~~~~~v~~l~~ll~~~~~~v~~~a~~~l~~l~~~~~~~~~i~~~~~~~~L~~l~~ 511 (529)
T 1jdh_A 432 MEEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCELAQDKEAAEAIEAEGATAPLTELLH 511 (529)
T ss_dssp HHHHHHHHHHHHHHHTTSHHHHHHHHHTTCHHHHHHGGGCSCHHHHHHHHHHHHHHTTSHHHHHHHHHTTCHHHHHHGGG
T ss_pred HHHHHHHHHHHHHHHhcCchHHHHHhccCCccHHHHHHcCCchHHHHHHHHHHHHHhcCHHHHHHHHHcCChHHHHHHhc
Confidence 34555678899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChhhhhhcc
Q 033071 115 SPVRNTVNQRF 125 (128)
Q Consensus 115 S~~e~tVl~a~ 125 (128)
++++++...|.
T Consensus 512 ~~~~~v~~~a~ 522 (529)
T 1jdh_A 512 SRNEGVATYAA 522 (529)
T ss_dssp CSSHHHHHHHH
T ss_pred CCCHHHHHHHH
Confidence 99999876653
No 22
>4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A
Probab=99.02 E-value=6.9e-10 Score=90.85 Aligned_cols=102 Identities=13% Similarity=0.166 Sum_probs=90.4
Q ss_pred HHHHHHHHHhhcCChHHHHHHHHHHhhhhccC-CCcHHHHHhhcchhHHHHhhcCCcHHHHHHHhhhhhhcccC-hhhHH
Q 033071 21 QYLQELVSQFQNSTDEERKEKIVANLANFAYD-PYNYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNASVD-PANAA 98 (128)
Q Consensus 21 eyLq~LV~Efq~t~~~eakeqvlAnLaNFAyD-P~N~~~Lrql~vidlFld~L~~~n~~l~efaiggLcNlclD-p~n~~ 98 (128)
+.+..||.-.+..++.+.|++++..|+|++.+ |.+...+.+.++++.++.+|.++++.+++.|+.+|+|+|-| |.++.
T Consensus 117 g~v~~Lv~lL~~~~~~~v~~~A~~~L~~l~~~~~~~~~~~~~~g~i~~L~~lL~~~~~~v~~~a~~aL~~l~~~~~~~~~ 196 (528)
T 4b8j_A 117 GVVPRFVQFLTREDFPQLQFEAAWALTNIASGTSENTKVVIDHGAVPIFVKLLGSSSDDVREQAVWALGNVAGDSPKCRD 196 (528)
T ss_dssp TCHHHHHHHHTCTTCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHHTCHHHHH
T ss_pred CCHHHHHHHhCCCCCHHHHHHHHHHHHHHhCCCHHHHHHHHhCCcHHHHHHHhcCCCHHHHHHHHHHHHHHhCCChhhHH
Confidence 46778888886666689999999999999997 89999999999999999999999999999999999999987 88899
Q ss_pred HHHhcCChhhHHhhh-cCCChhhhh
Q 033071 99 IITKSGGIPLIIECL-SSPVRNTVN 122 (128)
Q Consensus 99 ~I~~~ggi~~i~~~L-sS~~e~tVl 122 (128)
.+++.|+++.++.+| ++++..+..
T Consensus 197 ~i~~~g~l~~Ll~lL~~~~~~~v~~ 221 (528)
T 4b8j_A 197 LVLANGALLPLLAQLNEHTKLSMLR 221 (528)
T ss_dssp HHHHTTCHHHHHHTCCTTCCHHHHH
T ss_pred HHHHCCcHHHHHHHHhcCCCHHHHH
Confidence 999999999999999 455554433
No 23
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio}
Probab=99.00 E-value=6.9e-10 Score=98.04 Aligned_cols=90 Identities=26% Similarity=0.317 Sum_probs=85.2
Q ss_pred hHHHHHHHHHHhhhhccCCCcHHHHHhhcchhHHHHhhcCCcHHHHHHHhhhhhhcccChhhHHHHHhcCChhhHHhhhc
Q 033071 35 DEERKEKIVANLANFAYDPYNYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNASVDPANAAIITKSGGIPLIIECLS 114 (128)
Q Consensus 35 ~~eakeqvlAnLaNFAyDP~N~~~Lrql~vidlFld~L~~~n~~l~efaiggLcNlclDp~n~~~I~~~ggi~~i~~~Ls 114 (128)
.++.++.++..|+|++.+|.|...|++.++++.|+++|.++++.+++.|+++||||+.|++.++.|.+.||++.++.+++
T Consensus 565 ~~~v~~~a~~aL~~La~~~~~~~~l~~~~~i~~Lv~lL~~~~~~v~~~a~~aL~~L~~~~~~~~~i~~~g~i~~L~~Ll~ 644 (780)
T 2z6g_A 565 MEEIVEACTGALHILARDIHNRIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCELAQDKEAAEAIEAEGATAPLTELLH 644 (780)
T ss_dssp HHHHHHHHHHHHHHHTTSHHHHHHHHHTCCHHHHHHGGGCSCHHHHHHHHHHHHHHHTSHHHHHHHHHTTCHHHHHHGGG
T ss_pred hHHHHHHHHHHHHHHhcChhhHHHHHHCCcHHHHHHHHcCCCHHHHHHHHHHHHHHhcCHHHHHHHHHCCCHHHHHHHHc
Confidence 46788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChhhhhhc
Q 033071 115 SPVRNTVNQR 124 (128)
Q Consensus 115 S~~e~tVl~a 124 (128)
++++++...|
T Consensus 645 ~~~~~Vr~~A 654 (780)
T 2z6g_A 645 SRNEGVATYA 654 (780)
T ss_dssp CSCHHHHHHH
T ss_pred CCCHHHHHHH
Confidence 9999985554
No 24
>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B
Probab=99.00 E-value=5.4e-10 Score=93.28 Aligned_cols=103 Identities=10% Similarity=0.109 Sum_probs=90.9
Q ss_pred HHHHHHHHhhcCChHHHHHHHHHHhhhhcc-CCCcHHHHHhhcchhHHHHhhcCCcHHHHHHHhhhhhhccc--ChhhHH
Q 033071 22 YLQELVSQFQNSTDEERKEKIVANLANFAY-DPYNYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNASV--DPANAA 98 (128)
Q Consensus 22 yLq~LV~Efq~t~~~eakeqvlAnLaNFAy-DP~N~~~Lrql~vidlFld~L~~~n~~l~efaiggLcNlcl--Dp~n~~ 98 (128)
.++.|+.-. .+++.+.|+++...|+|.+. ++.+...+.+.|++++++.+|.+++..+++.|+++|||++. +++...
T Consensus 336 ~l~~L~~LL-~~~~~~i~~~a~~aL~nl~~~~~~~~~~v~~~g~i~~Lv~lL~~~~~~v~~~A~~aL~nl~~~~~~~~~~ 414 (529)
T 3tpo_A 336 ALAVFPSLL-TNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVPFLVGVLSKADFKTQKAAAWAITNYTSGGTVEQIV 414 (529)
T ss_dssp GGGGHHHHT-TCSSHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHSCHHHHH
T ss_pred cHHHHHHHH-cCCCHHHHHHHHHHHHHHhcccHHHHHHHHhcCcHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCCHHHHH
Confidence 344566655 46778899999999999987 57778889999999999999999999999999999999986 788999
Q ss_pred HHHhcCChhhHHhhhcCCChhhhhhcc
Q 033071 99 IITKSGGIPLIIECLSSPVRNTVNQRF 125 (128)
Q Consensus 99 ~I~~~ggi~~i~~~LsS~~e~tVl~a~ 125 (128)
++++.|+|++++++|++++++++..++
T Consensus 415 ~l~~~g~i~~L~~LL~~~d~~i~~~~L 441 (529)
T 3tpo_A 415 YLVHCGIIEPLMNLLSAKDTKIIQVIL 441 (529)
T ss_dssp HHHHTTCHHHHHHGGGCSCHHHHHHHH
T ss_pred HHHHCcCHHHHHHHhcCCCHHHHHHHH
Confidence 999999999999999999999887664
No 25
>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A*
Probab=98.95 E-value=1.5e-09 Score=87.30 Aligned_cols=104 Identities=9% Similarity=0.088 Sum_probs=90.4
Q ss_pred HHHHHHHHHhhcCChHHHHHHHHHHhhhhccC-CCcHHHHHhhcchhHHHHhhcC-CcHHHHHHHhhhhhhcccC-hhhH
Q 033071 21 QYLQELVSQFQNSTDEERKEKIVANLANFAYD-PYNYTFLRQLNVLELFLDCITE-PNEKLVEFGVGGICNASVD-PANA 97 (128)
Q Consensus 21 eyLq~LV~Efq~t~~~eakeqvlAnLaNFAyD-P~N~~~Lrql~vidlFld~L~~-~n~~l~efaiggLcNlclD-p~n~ 97 (128)
+-+..||..+-.+++.+.|++++..|+|.|-| |.+...+.+.|+++.++.+|++ +++.+.+.|+.+|+|+|-+ |..+
T Consensus 81 G~l~~Lv~~lL~s~~~~vr~~Aa~~Lg~ia~~n~~~~~~vv~~g~l~~Ll~LL~~~~~~~v~~~A~~ALsnl~~~~~~~~ 160 (296)
T 1xqr_A 81 SGMHLLVGRYLEAGAAGLRWRAAQLIGTCSQNVAAIQEQVLGLGALRKLLRLLDRDACDTVRVKALFAISCLVREQEAGL 160 (296)
T ss_dssp THHHHHHHTTTTCSSHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHHCSCHHHHHHHHHHHHHHHTTCHHHH
T ss_pred CCHHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHCCCHHHHHHHHccCCCHHHHHHHHHHHHHHHcCCcHHH
Confidence 45677888344688999999999999999985 8899999999999999999995 5899999999999999965 7778
Q ss_pred HHHHhcCChhhHHhhhcCCChhhhhhc
Q 033071 98 AIITKSGGIPLIIECLSSPVRNTVNQR 124 (128)
Q Consensus 98 ~~I~~~ggi~~i~~~LsS~~e~tVl~a 124 (128)
+.+++.|||+.++.+|+++++.+...|
T Consensus 161 ~~~~~~ggi~~L~~lL~~~d~~v~~~A 187 (296)
T 1xqr_A 161 LQFLRLDGFSVLMRAMQQQVQKLKVKS 187 (296)
T ss_dssp HHHHHTTHHHHHHHHHHSSCHHHHHHH
T ss_pred HHHHHCCCHHHHHHHHcCCCHHHHHHH
Confidence 889999999999999999887765544
No 26
>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A*
Probab=98.95 E-value=1.1e-09 Score=88.17 Aligned_cols=103 Identities=14% Similarity=0.130 Sum_probs=88.9
Q ss_pred ChHHHHHHHHHHhhc-----------CChHHHHHHHHHHhhhhccCCCcHHHHHhhcchhHHHH-hhcCCcHHHHHHHhh
Q 033071 18 PRLQYLQELVSQFQN-----------STDEERKEKIVANLANFAYDPYNYTFLRQLNVLELFLD-CITEPNEKLVEFGVG 85 (128)
Q Consensus 18 ~R~eyLq~LV~Efq~-----------t~~~eakeqvlAnLaNFAyDP~N~~~Lrql~vidlFld-~L~~~n~~l~efaig 85 (128)
+=.+-++..+.-+++ +.+.|.|+..+.+|.++..+..|-.-+.+.|+++.++. +|.++++.+++.|+.
T Consensus 25 d~~~~mk~~l~vl~~~~~~~~~~~~~~~~~e~k~~Al~~L~~lv~~~dna~~~~~~G~l~~Lv~~lL~s~~~~vr~~Aa~ 104 (296)
T 1xqr_A 25 GEVEQMKSCLRVLSQPMPPTAGEAEQAADQQEREGALELLADLCENMDNAADFCQLSGMHLLVGRYLEAGAAGLRWRAAQ 104 (296)
T ss_dssp HHHHHHHHHHHHHHSCCCSSCCHHHHHHHHHHHHHHHHHHHHHHTSHHHHHHHHHTTHHHHHHHTTTTCSSHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhCCCcccccccccCCCHHHHHHHHHHHHHHHhChhhHHHHHHcCCHHHHHHHHHcCCCHHHHHHHHH
Confidence 335556666666655 35568999999999999999999999999999999999 999999999999999
Q ss_pred hhhhccc-ChhhHHHHHhcCChhhHHhhhcCC-Chhh
Q 033071 86 GICNASV-DPANAAIITKSGGIPLIIECLSSP-VRNT 120 (128)
Q Consensus 86 gLcNlcl-Dp~n~~~I~~~ggi~~i~~~LsS~-~e~t 120 (128)
.|+|++- +|.+++.|++.||+|+++.+|+++ ++++
T Consensus 105 ~Lg~ia~~n~~~~~~vv~~g~l~~Ll~LL~~~~~~~v 141 (296)
T 1xqr_A 105 LIGTCSQNVAAIQEQVLGLGALRKLLRLLDRDACDTV 141 (296)
T ss_dssp HHHHHHTTCHHHHHHHHHTTHHHHHHHHHHHCSCHHH
T ss_pred HHHHHHhCCHHHHHHHHHCCCHHHHHHHHccCCCHHH
Confidence 9999985 599999999999999999999975 4443
No 27
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens}
Probab=98.94 E-value=2.2e-09 Score=91.25 Aligned_cols=105 Identities=22% Similarity=0.233 Sum_probs=94.4
Q ss_pred HHHHHHHHHhhcCChHHHHHHHHHHhhhhccCCCcHHHHHhhcchhHHHHhhcCC----------------------cHH
Q 033071 21 QYLQELVSQFQNSTDEERKEKIVANLANFAYDPYNYTFLRQLNVLELFLDCITEP----------------------NEK 78 (128)
Q Consensus 21 eyLq~LV~Efq~t~~~eakeqvlAnLaNFAyDP~N~~~Lrql~vidlFld~L~~~----------------------n~~ 78 (128)
+.++.|+.-.+..++.+.++.++..|+|++.+|.|...+.+.++++.++++|..+ ++.
T Consensus 352 ~~l~~L~~lL~~~~~~~v~~~a~~~L~nLa~~~~~~~~i~~~~~i~~Lv~lL~~~~~~vr~~a~~al~n~~~~~~~~~~~ 431 (644)
T 2z6h_A 352 YGLPVVVKLLHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQDTQRRTSMGGTQQQFVEGVRMEE 431 (644)
T ss_dssp THHHHHHHTTSTTCCHHHHHHHHHHHHHHTTSGGGHHHHHHTTHHHHHHHHHHHHHHHHTTC----------CCSSCHHH
T ss_pred cChHHHHHHhCccCchHHHHHHHHHHHHHccCHHHHHHHHHcCCHHHHHHHHhccchhhhhHhhhccccchhcccccHHH
Confidence 4688899888766667899999999999999999999999999999999999763 467
Q ss_pred HHHHHhhhhhhcccChhhHHHHHhcCChhhHHhhhcCCChhhhhhcc
Q 033071 79 LVEFGVGGICNASVDPANAAIITKSGGIPLIIECLSSPVRNTVNQRF 125 (128)
Q Consensus 79 l~efaiggLcNlclDp~n~~~I~~~ggi~~i~~~LsS~~e~tVl~a~ 125 (128)
+++.|+++|+||+.++.++..+.+.|+|+.++.+|.++++++...|.
T Consensus 432 v~~~a~~aL~~La~~~~~~~~l~~~~~i~~Lv~lL~~~~~~v~~~a~ 478 (644)
T 2z6h_A 432 IVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSPIENIQRVAA 478 (644)
T ss_dssp HHHHHHHHHHHHTTSHHHHHHHHHTTCHHHHHHHTTCSCHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHhCCcHHHHHHHHcCCCHHHHHHHH
Confidence 88999999999999999999999999999999999999998776553
No 28
>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ...
Probab=98.94 E-value=3.7e-09 Score=88.26 Aligned_cols=102 Identities=14% Similarity=0.193 Sum_probs=88.0
Q ss_pred HHHHHHHhhcCChHHHHHHHHHHhhhhccCCCc--HHHHHhhcchhHHHHhhcC-CcHHHHHHHhhhhhhcc-cChhhHH
Q 033071 23 LQELVSQFQNSTDEERKEKIVANLANFAYDPYN--YTFLRQLNVLELFLDCITE-PNEKLVEFGVGGICNAS-VDPANAA 98 (128)
Q Consensus 23 Lq~LV~Efq~t~~~eakeqvlAnLaNFAyDP~N--~~~Lrql~vidlFld~L~~-~n~~l~efaiggLcNlc-lDp~n~~ 98 (128)
++.||.-. .+++.+.|.+.+..+..+-..-.| .+.+.+.|+++.|+.+|.. +++.++..|+++|+|+| -++++++
T Consensus 59 i~~~v~~l-~s~d~~~q~~a~~~~rklls~e~~ppi~~ii~~G~ip~LV~lL~~~~~~~lq~~Aa~aL~nias~~~e~~~ 137 (510)
T 3ul1_B 59 VEDIVKGI-NSNNLESQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGKTDCSPIQFESAWALTNIASGTSEQTK 137 (510)
T ss_dssp HHHHHHHH-TSSCHHHHHHHHHHHHHHHTCSSCCCHHHHHHTTHHHHHHHHTTCTTCHHHHHHHHHHHHHHHTSCHHHHH
T ss_pred HHHHHHHh-cCCCHHHHHHHHHHHHHHhcCCCCchHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHhcCCHHHHH
Confidence 78999888 788889999999888877554444 4678899999999999974 57899999999999996 4699999
Q ss_pred HHHhcCChhhHHhhhcCCChhhhhhcc
Q 033071 99 IITKSGGIPLIIECLSSPVRNTVNQRF 125 (128)
Q Consensus 99 ~I~~~ggi~~i~~~LsS~~e~tVl~a~ 125 (128)
.|++.|+||.++.+|+|+++++.-.|+
T Consensus 138 ~vv~~GaIp~Lv~lL~s~~~~v~e~A~ 164 (510)
T 3ul1_B 138 AVVDGGAIPAFISLLASPHAHISEQAV 164 (510)
T ss_dssp HHHHTTHHHHHHHHTTCSCHHHHHHHH
T ss_pred HHHHCCCHHHHHHHHcCCCHHHHHHHH
Confidence 999999999999999999998877664
No 29
>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A
Probab=98.91 E-value=2.4e-09 Score=88.08 Aligned_cols=105 Identities=12% Similarity=0.139 Sum_probs=93.4
Q ss_pred HHHHHHHHHHhhcCChHHHHHHHHHHhhhhccC-CCcHHHHHhhcchhHHHHhhcCCcHHHHHHHhhhhhhcccC-hhhH
Q 033071 20 LQYLQELVSQFQNSTDEERKEKIVANLANFAYD-PYNYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNASVD-PANA 97 (128)
Q Consensus 20 ~eyLq~LV~Efq~t~~~eakeqvlAnLaNFAyD-P~N~~~Lrql~vidlFld~L~~~n~~l~efaiggLcNlclD-p~n~ 97 (128)
.+.+..||.-.+..++.+.|++++..|+|++.+ |.+...+.+.++++.|+.+|.++++.+.+.|+.+|+|+|-| |.++
T Consensus 129 ~g~i~~Lv~~L~~~~~~~v~~~A~~~L~~l~~~~~~~~~~~~~~g~i~~Lv~lL~~~~~~vr~~A~~aL~~l~~~~~~~~ 208 (530)
T 1wa5_B 129 AGVVPRLVEFMRENQPEMLQLEAAWALTNIASGTSAQTKVVVDADAVPLFIQLLYTGSVEVKEQAIWALGNVAGDSTDYR 208 (530)
T ss_dssp TTCHHHHHHTTSTTSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHHHHHCCHHHHHHHHHHHHHHHTTCHHHH
T ss_pred CCCHHHHHHHhCCCCCHHHHHHHHHHHHHHhCCCHHHHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHhCCCccch
Confidence 356788888776555889999999999999985 78888999999999999999999999999999999999987 8999
Q ss_pred HHHHhcCChhhHHhhhcCCChhhhhhc
Q 033071 98 AIITKSGGIPLIIECLSSPVRNTVNQR 124 (128)
Q Consensus 98 ~~I~~~ggi~~i~~~LsS~~e~tVl~a 124 (128)
+.+++.|+++.++.+|+++++++...|
T Consensus 209 ~~~~~~~~l~~L~~ll~~~~~~v~~~a 235 (530)
T 1wa5_B 209 DYVLQCNAMEPILGLFNSNKPSLIRTA 235 (530)
T ss_dssp HHHHHTTCHHHHHHGGGSCCHHHHHHH
T ss_pred HHHHHcCcHHHHHHHhccCCHHHHHHH
Confidence 999999999999999999877765544
No 30
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A
Probab=98.87 E-value=7.9e-09 Score=81.11 Aligned_cols=104 Identities=13% Similarity=0.144 Sum_probs=91.3
Q ss_pred HHHHHHHHHhhcCChHHHHHHHHHHhhhhcc-CCCcHHHHHhhcchhHHHHhhcCCcHHHHHHHhhhhhhcccC-hhhHH
Q 033071 21 QYLQELVSQFQNSTDEERKEKIVANLANFAY-DPYNYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNASVD-PANAA 98 (128)
Q Consensus 21 eyLq~LV~Efq~t~~~eakeqvlAnLaNFAy-DP~N~~~Lrql~vidlFld~L~~~n~~l~efaiggLcNlclD-p~n~~ 98 (128)
+.++.||.-.+..++.+.|..++.-|+|++. +|.+...+.+.++++.++.+|.++++.+.+.|+..|+|++-+ +.+++
T Consensus 64 ~~i~~L~~~L~~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~lL~~~~~~vr~~a~~~L~~l~~~~~~~~~ 143 (450)
T 2jdq_A 64 GVVARFVEFLKRKENCTLQFESAWVLTNIASGNSLQTRIVIQAGAVPIFIELLSSEFEDVQEQAVWALGNIAGDSTMCRD 143 (450)
T ss_dssp THHHHHHHHHTCTTCHHHHHHHHHHHHHHHSSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred CcHHHHHHHHCCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHhCCCHHHHHHHHcCCCHHHHHHHHHHHHHHccCCHHHHH
Confidence 5788889888766688999999999999998 478888888899999999999999999999999999999977 78999
Q ss_pred HHHhcCChhhHHhhhcC-CChhhhhhc
Q 033071 99 IITKSGGIPLIIECLSS-PVRNTVNQR 124 (128)
Q Consensus 99 ~I~~~ggi~~i~~~LsS-~~e~tVl~a 124 (128)
.+++.|+++.++.+|++ +++++...|
T Consensus 144 ~~~~~~~i~~L~~~l~~~~~~~v~~~a 170 (450)
T 2jdq_A 144 YVLDCNILPPLLQLFSKQNRLTMTRNA 170 (450)
T ss_dssp HHHHTTCHHHHHHHTTSCCCHHHHHHH
T ss_pred HHHHCCCHHHHHHHhcCCCCHHHHHHH
Confidence 99999999999999996 555554443
No 31
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio}
Probab=98.82 E-value=5.5e-09 Score=92.29 Aligned_cols=101 Identities=13% Similarity=0.191 Sum_probs=92.9
Q ss_pred HHHHHHHHHHhhcCChHHHHHHHHHHhhhhccCCCcHHHHHhhcchhHHHHhhcCCcHHHHHHHhhhhhhcccC-hhhHH
Q 033071 20 LQYLQELVSQFQNSTDEERKEKIVANLANFAYDPYNYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNASVD-PANAA 98 (128)
Q Consensus 20 ~eyLq~LV~Efq~t~~~eakeqvlAnLaNFAyDP~N~~~Lrql~vidlFld~L~~~n~~l~efaiggLcNlclD-p~n~~ 98 (128)
.+.|..||.-.+..++.+.|+.++..|.|++.++.|...+.+.++++.++++|.++++.+++.|+..|+|||.+ +..+.
T Consensus 191 ~~~i~~Lv~~L~~~~d~~vr~~Aa~aL~~Ls~~~~~~~~i~~~g~I~~Lv~lL~~~~~~v~~~A~~aL~nLa~~~~~~~~ 270 (780)
T 2z6g_A 191 PQMVSAIVRTMQNTNDVETARCTSGTLHNLSHHREGLLAIFKSGGIPALVNMLGSPVDSVLFHAITTLHNLLLHQEGAKM 270 (780)
T ss_dssp HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHTSHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHSTTHHH
T ss_pred cChHHHHHHHHcCCCCHHHHHHHHHHHHHHhCCchhHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHhCCChhhHH
Confidence 36789999988877799999999999999999999999999999999999999999999999999999999987 67788
Q ss_pred HHHhcCChhhHHhhhcCCChhh
Q 033071 99 IITKSGGIPLIIECLSSPVRNT 120 (128)
Q Consensus 99 ~I~~~ggi~~i~~~LsS~~e~t 120 (128)
.+.+.|+|+.++.+|++++..+
T Consensus 271 ~v~~~g~v~~Lv~lL~~~~~~v 292 (780)
T 2z6g_A 271 AVRLAGGLQKMVALLNKTNVKF 292 (780)
T ss_dssp HHHHTTHHHHHHHGGGCCCHHH
T ss_pred HHHHcCCHHHHHHHHhcCCHHH
Confidence 8888999999999999987554
No 32
>4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A
Probab=98.79 E-value=2.2e-08 Score=81.99 Aligned_cols=106 Identities=15% Similarity=0.222 Sum_probs=90.8
Q ss_pred hHHHHHHHHHHhhcCChHHHHHHHHHHhhhhccC-C-CcHHHHHhhcchhHHHHhhcCCc-HHHHHHHhhhhhhcccC-h
Q 033071 19 RLQYLQELVSQFQNSTDEERKEKIVANLANFAYD-P-YNYTFLRQLNVLELFLDCITEPN-EKLVEFGVGGICNASVD-P 94 (128)
Q Consensus 19 R~eyLq~LV~Efq~t~~~eakeqvlAnLaNFAyD-P-~N~~~Lrql~vidlFld~L~~~n-~~l~efaiggLcNlclD-p 94 (128)
..+-|+.||... .+++.+.+...+..|++++.. + .+...+.+.++++.|+.+|.+++ +.+++.|+.+|+|+|.+ +
T Consensus 72 ~~~~l~~lv~~L-~s~~~~~~~~A~~~L~~l~s~~~~~~~~~~~~~g~v~~Lv~lL~~~~~~~v~~~A~~~L~~l~~~~~ 150 (528)
T 4b8j_A 72 KLESLPAMIGGV-YSDDNNLQLEATTQFRKLLSIERSPPIEEVIQSGVVPRFVQFLTREDFPQLQFEAAWALTNIASGTS 150 (528)
T ss_dssp ---CHHHHHHHH-TSSCHHHHHHHHHHHHHHHTCSSSCCHHHHHHTTCHHHHHHHHTCTTCHHHHHHHHHHHHHHHTSCH
T ss_pred hHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHhcCCCCchHHHHHHCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHhCCCH
Confidence 345588899988 466788999999999999553 3 67888899999999999999987 99999999999999987 9
Q ss_pred hhHHHHHhcCChhhHHhhhcCCChhhhhhcc
Q 033071 95 ANAAIITKSGGIPLIIECLSSPVRNTVNQRF 125 (128)
Q Consensus 95 ~n~~~I~~~ggi~~i~~~LsS~~e~tVl~a~ 125 (128)
+++..+++.|+|+.++.+|+++++++...|+
T Consensus 151 ~~~~~~~~~g~i~~L~~lL~~~~~~v~~~a~ 181 (528)
T 4b8j_A 151 ENTKVVIDHGAVPIFVKLLGSSSDDVREQAV 181 (528)
T ss_dssp HHHHHHHHTTHHHHHHHHTTCSCHHHHHHHH
T ss_pred HHHHHHHhCCcHHHHHHHhcCCCHHHHHHHH
Confidence 9999999999999999999999888766554
No 33
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster}
Probab=98.72 E-value=2.6e-08 Score=90.90 Aligned_cols=103 Identities=8% Similarity=0.029 Sum_probs=85.8
Q ss_pred HHHHHHHHHHhhcCChHHHHHHHHHHhhhhccCCC------------------------------cH---HHHHhhcchh
Q 033071 20 LQYLQELVSQFQNSTDEERKEKIVANLANFAYDPY------------------------------NY---TFLRQLNVLE 66 (128)
Q Consensus 20 ~eyLq~LV~Efq~t~~~eakeqvlAnLaNFAyDP~------------------------------N~---~~Lrql~vid 66 (128)
.+.|+.||.-.. +++...+..++--|.|.+-++. +. ..+-+.|+++
T Consensus 420 ~g~Ip~LV~LL~-s~d~~i~~~al~~L~NLt~~~d~q~~~~~l~~la~~s~~~v~~~~~ld~~~~v~~r~~~VveaGaVp 498 (810)
T 3now_A 420 KASIHALMDLAR-GGNQSCLYGVVTTFVNLCNAYEKQEMLPEMIELAKFAKQHIPEEHELDDVDFINKRITVLANEGITT 498 (810)
T ss_dssp HHHHHHHHHHHH-TTCGGGHHHHHHHHHHHTTCSCCCCCCCSCGGGTTTTCCSCCCSSCHHHHHHHHHHHHHHHHTTHHH
T ss_pred cchHHHHHHHhC-CCChHHHHHHHHHHHHHcCCchhhhhhHHHHHHHHHhhccCccccccccHHHHHHHHHHHHHCcCHH
Confidence 468889998874 5556677777777777775431 12 4666789999
Q ss_pred HHHHhhcCCcHHHHHHHhhhhhhcccChhhHHHHHhcCChhhHHhhhcCCChhhhhh
Q 033071 67 LFLDCITEPNEKLVEFGVGGICNASVDPANAAIITKSGGIPLIIECLSSPVRNTVNQ 123 (128)
Q Consensus 67 lFld~L~~~n~~l~efaiggLcNlclDp~n~~~I~~~ggi~~i~~~LsS~~e~tVl~ 123 (128)
+|+.+|+++++.+++.|+..|.|+|-|++++..|++.|+||+++.+|+|+.+.+...
T Consensus 499 ~LV~LL~s~s~~vqe~Aa~aL~NLA~d~~~r~~Vv~~Gaip~Lv~LL~s~~~~~k~~ 555 (810)
T 3now_A 499 ALCALAKTESHNSQELIARVLNAVCGLKELRGKVVQEGGVKALLRMALEGTEKGKRH 555 (810)
T ss_dssp HHHHHHTCCCHHHHHHHHHHHHHHHTSHHHHHHHHHTTHHHHHHHHHHSSCHHHHHH
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHHHHHHHHccCCHHHHHH
Confidence 999999999999999999999999999999999999999999999999988765433
No 34
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A
Probab=98.72 E-value=3.1e-08 Score=77.71 Aligned_cols=104 Identities=13% Similarity=0.154 Sum_probs=91.1
Q ss_pred HHHHHHHHHhhcCChHHHHHHHHHHhhhhcc-CCCcHHHHHhhcchhHHHHhhcCCcHHHHHHHhhhhhhccc--ChhhH
Q 033071 21 QYLQELVSQFQNSTDEERKEKIVANLANFAY-DPYNYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNASV--DPANA 97 (128)
Q Consensus 21 eyLq~LV~Efq~t~~~eakeqvlAnLaNFAy-DP~N~~~Lrql~vidlFld~L~~~n~~l~efaiggLcNlcl--Dp~n~ 97 (128)
+.++.|+.-.+. ++...|+.++..|+|++. ++.+...+.+.++++.++++|.++++.+++.|+..|+|++. +|+..
T Consensus 276 ~~l~~L~~ll~~-~~~~vr~~a~~~L~~l~~~~~~~~~~~~~~~~l~~L~~~l~~~~~~v~~~a~~~L~~l~~~~~~~~~ 354 (450)
T 2jdq_A 276 SALQSLLHLLSS-PKESIKKEACWTISNITAGNRAQIQTVIDANIFPALISILQTAEFRTRKEAAWAITNATSGGSAEQI 354 (450)
T ss_dssp THHHHHHHHTTC-SSHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHCCHHHH
T ss_pred ccHHHHHHHHcC-CCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHHHHHHHHhcCCHHHHHHHHHHHHHHHcCCCHHHH
Confidence 467778877754 678899999999999996 67777778888999999999999999999999999999986 68888
Q ss_pred HHHHhcCChhhHHhhhcCCChhhhhhcc
Q 033071 98 AIITKSGGIPLIIECLSSPVRNTVNQRF 125 (128)
Q Consensus 98 ~~I~~~ggi~~i~~~LsS~~e~tVl~a~ 125 (128)
+.+++.|+++.++++|.++++++...|+
T Consensus 355 ~~l~~~~~i~~L~~ll~~~~~~v~~~a~ 382 (450)
T 2jdq_A 355 KYLVELGCIKPLCDLLTVMDSKIVQVAL 382 (450)
T ss_dssp HHHHHHTCHHHHHHGGGSSCHHHHHHHH
T ss_pred HHHHHCCCHHHHHHHhcCCCHHHHHHHH
Confidence 9899999999999999999888776654
No 35
>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A
Probab=98.63 E-value=8e-08 Score=79.04 Aligned_cols=104 Identities=13% Similarity=0.102 Sum_probs=90.3
Q ss_pred HHHHHHHHHhhcCChHHHHHHHHHHhhhhcc-CCCcHHHHHhhcchhHHHHhhcCCcHHHHHHHhhhhhhccc--Ch--h
Q 033071 21 QYLQELVSQFQNSTDEERKEKIVANLANFAY-DPYNYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNASV--DP--A 95 (128)
Q Consensus 21 eyLq~LV~Efq~t~~~eakeqvlAnLaNFAy-DP~N~~~Lrql~vidlFld~L~~~n~~l~efaiggLcNlcl--Dp--~ 95 (128)
+.+..|+.-.+. ++.+.|+.++..|+|++. +|.+...+-+.++++.++.+|.++++.+++.|+.+|+|++. +| +
T Consensus 341 ~~l~~L~~lL~~-~~~~vr~~A~~aL~~l~~~~~~~~~~~~~~~~l~~L~~lL~~~~~~v~~~a~~aL~~l~~~~~~~~~ 419 (530)
T 1wa5_B 341 GVLPALRLLLSS-PKENIKKEACWTISNITAGNTEQIQAVIDANLIPPLVKLLEVAEYKTKKEACWAISNASSGGLQRPD 419 (530)
T ss_dssp THHHHHHHHTTC-SCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTTTCTH
T ss_pred chHHHHHHHHcC-CCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHHHHHHHHhcCCHHHHHHHHHHHHHHHhcCCCcHH
Confidence 467788887754 478899999999999995 67777777788999999999999999999999999999986 45 8
Q ss_pred hHHHHHhcCChhhHHhhhcCCChhhhhhcc
Q 033071 96 NAAIITKSGGIPLIIECLSSPVRNTVNQRF 125 (128)
Q Consensus 96 n~~~I~~~ggi~~i~~~LsS~~e~tVl~a~ 125 (128)
..+++++.|+++.++.+|.+++++++..|+
T Consensus 420 ~~~~l~~~~~l~~L~~ll~~~~~~v~~~al 449 (530)
T 1wa5_B 420 IIRYLVSQGCIKPLCDLLEIADNRIIEVTL 449 (530)
T ss_dssp HHHHHHHTTCHHHHHHHTTTCCHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHhCCCHHHHHHHH
Confidence 888999999999999999999988876654
No 36
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster}
Probab=98.58 E-value=6.3e-08 Score=88.42 Aligned_cols=104 Identities=7% Similarity=0.048 Sum_probs=92.1
Q ss_pred HHHHHHHHHhhcCChHHHHHHHHHHhhhhccCCCcHHHHHh-hcchhHHHHhhcCCcHHHHHHHhhhhhhccc-ChhhHH
Q 033071 21 QYLQELVSQFQNSTDEERKEKIVANLANFAYDPYNYTFLRQ-LNVLELFLDCITEPNEKLVEFGVGGICNASV-DPANAA 98 (128)
Q Consensus 21 eyLq~LV~Efq~t~~~eakeqvlAnLaNFAyDP~N~~~Lrq-l~vidlFld~L~~~n~~l~efaiggLcNlcl-Dp~n~~ 98 (128)
+++..||.-. .+++...|+..+.-|+|.+.+|.+...+.+ .+++.+++.+|.++++.+++.|+++|+|++. ++...+
T Consensus 623 G~l~~Lv~LL-~s~~~~Vq~~A~~~L~NLa~~~~~~~~~v~~~g~l~~Lv~LL~s~d~~vq~~Aa~ALanLt~~s~~~~~ 701 (810)
T 3now_A 623 QGVSKIEYYL-MEDHLYLTRAAAQCLCNLVMSEDVIKMFEGNNDRVKFLALLCEDEDEETATACAGALAIITSVSVKCCE 701 (810)
T ss_dssp THHHHHHHHH-HSCCTTHHHHHHHHHHHHTTSHHHHHHHHSSSSHHHHHHHGGGCSSHHHHHHHHHHHHHHHHHCHHHHH
T ss_pred CCHHHHHHHH-cCCCHHHHHHHHHHHHHHhCChHHHHHHHhccCcHHHHHHHhcCCCHHHHHHHHHHHHHHhCCCHHHHH
Confidence 4566676644 567888999999999999999999888886 6899999999999999999999999999998 899999
Q ss_pred HHHh-cCChhhHHhhhcCCChhhhhhcc
Q 033071 99 IITK-SGGIPLIIECLSSPVRNTVNQRF 125 (128)
Q Consensus 99 ~I~~-~ggi~~i~~~LsS~~e~tVl~a~ 125 (128)
.|++ .|||+.++++|+++++++...|+
T Consensus 702 ~ii~~~g~I~~Lv~LL~s~d~~vq~~A~ 729 (810)
T 3now_A 702 KILAIASWLDILHTLIANPSPAVQHRGI 729 (810)
T ss_dssp HHHTSTTHHHHHHHHHTCSSHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHCCCCHHHHHHHH
Confidence 9998 89999999999999998876653
No 37
>3opb_A SWI5-dependent HO expression protein 4; heat and arm fold, myosin folding and function, myosin bindi protein, protein binding; 2.90A {Saccharomyces cerevisiae}
Probab=98.17 E-value=3.4e-06 Score=77.30 Aligned_cols=65 Identities=12% Similarity=0.167 Sum_probs=60.1
Q ss_pred cHHHHHhhcchhHHHHhhcCCcHHHHHHHhhhhhhcccChhhHHHHHhcCChhhHHhhhcCCChh
Q 033071 55 NYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNASVDPANAAIITKSGGIPLIIECLSSPVRN 119 (128)
Q Consensus 55 N~~~Lrql~vidlFld~L~~~n~~l~efaiggLcNlclDp~n~~~I~~~ggi~~i~~~LsS~~e~ 119 (128)
|...+.+.|++..|+.++.++++..++.|+..|-|+|.|+++|..+++.||+++++.+|++..+.
T Consensus 449 ~~~~l~eaGvIp~Lv~Ll~S~s~~~re~A~~aL~nLS~d~~~R~~lvqqGal~~LL~lL~s~~~~ 513 (778)
T 3opb_A 449 NEKYILRTELISFLKREMHNLSPNCKQQVVRIIYNITRSKNFIPQLAQQGAVKIILEYLANKQDI 513 (778)
T ss_dssp HHHHTTTTTHHHHHHHHGGGSCHHHHHHHHHHHHHHHTSGGGHHHHHHTTHHHHHHHHTTCC---
T ss_pred HHHHHHHCcCHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHHHHHHHHhcCCCc
Confidence 67888999999999999999999999999999999999999999999999999999999998654
No 38
>4gmo_A Putative uncharacterized protein; ARM, heat, solenoid, nuclear transport, chaperone, RPL5, RPL KAP104, nucleus; 2.10A {Chaetomium thermophilum var} PDB: 4gmn_A
Probab=98.06 E-value=2.3e-06 Score=74.82 Aligned_cols=97 Identities=12% Similarity=0.131 Sum_probs=85.3
Q ss_pred hHHHHHHHHHHhhcCChHHHHHHHHHHhhhhccCCCcHHHHHhhcchhH-HHHhhcCCcHHHHHHHhhhhhhcccC--hh
Q 033071 19 RLQYLQELVSQFQNSTDEERKEKIVANLANFAYDPYNYTFLRQLNVLEL-FLDCITEPNEKLVEFGVGGICNASVD--PA 95 (128)
Q Consensus 19 R~eyLq~LV~Efq~t~~~eakeqvlAnLaNFAyDP~N~~~Lrql~vidl-Fld~L~~~n~~l~efaiggLcNlclD--p~ 95 (128)
|-+=+.+|+...+ +++.+.|+.+...|+|.+.||.+..-+-.-+++.. +-.+|.++++.+++-|+|+|-|||.| ++
T Consensus 32 ~~~~i~Pll~~L~-S~~~~~r~~A~~al~~l~~~~~~~~l~~~~~~v~~ll~~lL~D~~~~Vr~~A~gaLrnL~~~~g~d 110 (684)
T 4gmo_A 32 REDKILPVLKDLK-SPDAKSRTTAAGAIANIVQDAKCRKLLLREQVVHIVLTETLTDNNIDSRAAGWEILKVLAQEEEAD 110 (684)
T ss_dssp HHHTTHHHHHHHS-SSCCSHHHHHHHHHHHHTTSHHHHHHHHHTTHHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHSCHH
T ss_pred chhhHHHHHHHcC-CCCHHHHHHHHHHHHHHHcCcHHHHHHHHcCCHHHHHHHHcCCCCHHHHHHHHHHHHHHHhhcCch
Confidence 4556788999884 67788899999999999999999999888888765 56689999999999999999999987 79
Q ss_pred hHHHHHhcCChhhHHhhhcCC
Q 033071 96 NAAIITKSGGIPLIIECLSSP 116 (128)
Q Consensus 96 n~~~I~~~ggi~~i~~~LsS~ 116 (128)
...++++.|.+++|..+|.+.
T Consensus 111 ~~~~l~~~~il~~L~~~l~~~ 131 (684)
T 4gmo_A 111 FCVHLYRLDVLTAIEHAAKAV 131 (684)
T ss_dssp HHHHHHHTTHHHHHHHHHHHH
T ss_pred HHHHHHHcChHHHHHHHHHhh
Confidence 999999999999999998753
No 39
>3opb_A SWI5-dependent HO expression protein 4; heat and arm fold, myosin folding and function, myosin bindi protein, protein binding; 2.90A {Saccharomyces cerevisiae}
Probab=98.00 E-value=7.5e-06 Score=75.03 Aligned_cols=93 Identities=15% Similarity=0.247 Sum_probs=76.8
Q ss_pred HHHHHHHHHhhcCChHHHHHHHHHHhhhhccCCCcHHHHHhhcchhHHHHhhcCCcHH---HHHHHhhhhhhcccChhhH
Q 033071 21 QYLQELVSQFQNSTDEERKEKIVANLANFAYDPYNYTFLRQLNVLELFLDCITEPNEK---LVEFGVGGICNASVDPANA 97 (128)
Q Consensus 21 eyLq~LV~Efq~t~~~eakeqvlAnLaNFAyDP~N~~~Lrql~vidlFld~L~~~n~~---l~efaiggLcNlclDp~n~ 97 (128)
+-+..||+.. .+.+...|++++..|.|++-||.|+..+.+.|++++.+..|.+..+. ..+.|+.+|.||..+...+
T Consensus 457 GvIp~Lv~Ll-~S~s~~~re~A~~aL~nLS~d~~~R~~lvqqGal~~LL~lL~s~~~~~~~~k~~AA~ALArLlis~np~ 535 (778)
T 3opb_A 457 ELISFLKREM-HNLSPNCKQQVVRIIYNITRSKNFIPQLAQQGAVKIILEYLANKQDIGEPIRILGCRALTRMLIFTNPG 535 (778)
T ss_dssp THHHHHHHHG-GGSCHHHHHHHHHHHHHHHTSGGGHHHHHHTTHHHHHHHHTTCC---CCHHHHHHHHHHHHHHHTSCHH
T ss_pred cCHHHHHHHH-cCCCHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHHHHHHHHhcCCCcchHHHHHHHHHHHHHHhcCCHH
Confidence 4567889877 67889999999999999999999999999999999999999998665 8999999999997643333
Q ss_pred HHHHh---cCChhhHHhhhc
Q 033071 98 AIITK---SGGIPLIIECLS 114 (128)
Q Consensus 98 ~~I~~---~ggi~~i~~~Ls 114 (128)
..+-. .|+|++++++|+
T Consensus 536 ~~f~~~~~~~aI~pLv~LL~ 555 (778)
T 3opb_A 536 LIFKKYSALNAIPFLFELLP 555 (778)
T ss_dssp HHSSSSCSTTHHHHHHHTSC
T ss_pred HHcCCCccccchHHHHHHcC
Confidence 32211 389999999998
No 40
>4gmo_A Putative uncharacterized protein; ARM, heat, solenoid, nuclear transport, chaperone, RPL5, RPL KAP104, nucleus; 2.10A {Chaetomium thermophilum var} PDB: 4gmn_A
Probab=96.84 E-value=0.00073 Score=59.05 Aligned_cols=66 Identities=18% Similarity=0.288 Sum_probs=56.1
Q ss_pred HHhhcchhHHHHhhcCCcHHHHHHHhhhhhhcccChhhHHHHHhcCChhh-HHhhhcCCChhhhhhcc
Q 033071 59 LRQLNVLELFLDCITEPNEKLVEFGVGGICNASVDPANAAIITKSGGIPL-IIECLSSPVRNTVNQRF 125 (128)
Q Consensus 59 Lrql~vidlFld~L~~~n~~l~efaiggLcNlclDp~n~~~I~~~ggi~~-i~~~LsS~~e~tVl~a~ 125 (128)
+++=++++ +|+.|+++++...+.|+++|+|+|-||.+++.++..|+|.. |..+|+.++.+++..|.
T Consensus 31 ~~~~~i~P-ll~~L~S~~~~~r~~A~~al~~l~~~~~~~~l~~~~~~v~~ll~~lL~D~~~~Vr~~A~ 97 (684)
T 4gmo_A 31 LREDKILP-VLKDLKSPDAKSRTTAAGAIANIVQDAKCRKLLLREQVVHIVLTETLTDNNIDSRAAGW 97 (684)
T ss_dssp HHHHTTHH-HHHHHSSSCCSHHHHHHHHHHHHTTSHHHHHHHHHTTHHHHHHHTTTTCSCHHHHHHHH
T ss_pred cchhhHHH-HHHHcCCCCHHHHHHHHHHHHHHHcCcHHHHHHHHcCCHHHHHHHHcCCCCHHHHHHHH
Confidence 34445555 56889999999999999999999999999999999999976 56789999998887664
No 41
>3ltm_A Alpha-REP4; protein engineering, heat-like repeat, protein binding; HET: 1PE 12P; 2.15A {Synthetic}
Probab=96.54 E-value=0.0093 Score=42.72 Aligned_cols=95 Identities=6% Similarity=0.029 Sum_probs=48.9
Q ss_pred ChHHHHHHHHHHhhcCChHHHHHHHHHHhhhhccCCCcHHH-------------------HH---hhcchhHHHHhhcCC
Q 033071 18 PRLQYLQELVSQFQNSTDEERKEKIVANLANFAYDPYNYTF-------------------LR---QLNVLELFLDCITEP 75 (128)
Q Consensus 18 ~R~eyLq~LV~Efq~t~~~eakeqvlAnLaNFAyDP~N~~~-------------------Lr---ql~vidlFld~L~~~ 75 (128)
...+-+..|+..++ .++...|.+++..|+.+..+ .-.+. |. .-.+++.++..|.++
T Consensus 16 ~~~~~~~~L~~~L~-~~~~~vR~~A~~~L~~~~~~-~~~~~L~~~l~~~~~~vr~~a~~aL~~~~~~~~~~~L~~~l~~~ 93 (211)
T 3ltm_A 16 ADPEKVEMYIKNLQ-DDSYYVRRAAAYALGKIGDE-RAVEPLIKALKDEDAWVRRAAADALGQIGDERAVEPLIKALKDE 93 (211)
T ss_dssp CCGGGHHHHHHHTT-CSSHHHHHHHHHHHHHHCCG-GGHHHHHHHTTCSCHHHHHHHHHHHHHHCCGGGHHHHHHHTTCS
T ss_pred cCHhHHHHHHHHHc-CCCHHHHHHHHHHHHHhCCc-cHHHHHHHHHcCCCHHHHHHHHHHHHhhCCHHHHHHHHHHHcCC
Confidence 33556666666664 45666666666666655431 00000 00 012445555555555
Q ss_pred cHHHHHHHhhhhhhcccChhhHHHHHhcCChhhHHhhhcCCChhhhhhc
Q 033071 76 NEKLVEFGVGGICNASVDPANAAIITKSGGIPLIIECLSSPVRNTVNQR 124 (128)
Q Consensus 76 n~~l~efaiggLcNlclDp~n~~~I~~~ggi~~i~~~LsS~~e~tVl~a 124 (128)
++.+...|+.+|.++.- .+.++.++.+|+++++.+...|
T Consensus 94 ~~~vr~~a~~aL~~~~~----------~~~~~~L~~~l~d~~~~vr~~a 132 (211)
T 3ltm_A 94 DGWVRQSAAVALGQIGD----------ERAVEPLIKALKDEDWFVRIAA 132 (211)
T ss_dssp SHHHHHHHHHHHHHHCC----------GGGHHHHHHHTTCSSHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCc----------HHHHHHHHHHHhCCCHHHHHHH
Confidence 55555555555555431 1346666777776666655444
No 42
>3ltm_A Alpha-REP4; protein engineering, heat-like repeat, protein binding; HET: 1PE 12P; 2.15A {Synthetic}
Probab=96.11 E-value=0.022 Score=40.73 Aligned_cols=83 Identities=7% Similarity=0.065 Sum_probs=54.4
Q ss_pred HHHHHHHHHhhcCChHHHHHHHHHHhhhhccCCCcHHHHHhhcchhHHHHhhcCCcHHHHHHHhhhhhhcccChhhHHHH
Q 033071 21 QYLQELVSQFQNSTDEERKEKIVANLANFAYDPYNYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNASVDPANAAII 100 (128)
Q Consensus 21 eyLq~LV~Efq~t~~~eakeqvlAnLaNFAyDP~N~~~Lrql~vidlFld~L~~~n~~l~efaiggLcNlclDp~n~~~I 100 (128)
+.+..|+.-+ ..++.+.|..++..|+++.. -.+++.++.+|.++++.+...|+-+|.++.- +
T Consensus 81 ~~~~~L~~~l-~~~~~~vr~~a~~aL~~~~~----------~~~~~~L~~~l~d~~~~vr~~a~~aL~~~~~-~------ 142 (211)
T 3ltm_A 81 RAVEPLIKAL-KDEDGWVRQSAAVALGQIGD----------ERAVEPLIKALKDEDWFVRIAAAFALGEIGD-E------ 142 (211)
T ss_dssp GGHHHHHHHT-TCSSHHHHHHHHHHHHHHCC----------GGGHHHHHHHTTCSSHHHHHHHHHHHHHHCC-G------
T ss_pred HHHHHHHHHH-cCCCHHHHHHHHHHHHHhCc----------HHHHHHHHHHHhCCCHHHHHHHHHHHHHcCC-H------
Confidence 3445555555 33445566666666666542 2477888888988999999998888888742 2
Q ss_pred HhcCChhhHHhhhcCCChhhhhhc
Q 033071 101 TKSGGIPLIIECLSSPVRNTVNQR 124 (128)
Q Consensus 101 ~~~ggi~~i~~~LsS~~e~tVl~a 124 (128)
..++.+..+|+++++.+...|
T Consensus 143 ---~~~~~L~~~l~d~~~~vr~~a 163 (211)
T 3ltm_A 143 ---RAVEPLIKALKDEDGWVRQSA 163 (211)
T ss_dssp ---GGHHHHHHHTTCSSHHHHHHH
T ss_pred ---HHHHHHHHHHcCCCHHHHHHH
Confidence 346677777777766655444
No 43
>3ltj_A Alpharep-4; protein engineering, heat-like repeat, protein binding; 1.80A {Synthetic}
Probab=96.06 E-value=0.027 Score=39.98 Aligned_cols=58 Identities=7% Similarity=0.138 Sum_probs=33.2
Q ss_pred HHHHHHHHhhcCChHHHHHHHHHHhhhhccCCCcHHHHHhhcchhHHHHhhcCCcHHHHHHHhhhhhhc
Q 033071 22 YLQELVSQFQNSTDEERKEKIVANLANFAYDPYNYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNA 90 (128)
Q Consensus 22 yLq~LV~Efq~t~~~eakeqvlAnLaNFAyDP~N~~~Lrql~vidlFld~L~~~n~~l~efaiggLcNl 90 (128)
.+..|+.-+ ..++...|..++..|+.+.. | .+++.++..|.++++.+...|+.+|.++
T Consensus 46 ~~~~L~~~l-~~~~~~vr~~a~~~L~~~~~-~---------~~~~~L~~~l~d~~~~vr~~a~~aL~~~ 103 (201)
T 3ltj_A 46 AVEPLIKAL-KDEDAWVRRAAADALGQIGD-E---------RAVEPLIKALKDEDGWVRQSAAVALGQI 103 (201)
T ss_dssp GHHHHHHHT-TCSSHHHHHHHHHHHHHHCC-G---------GGHHHHHHHTTCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH-cCCCHHHHHHHHHHHHhhCC-H---------HHHHHHHHHHcCCCHHHHHHHHHHHHHh
Confidence 445555555 34455566666666666542 1 4555666666666666666666666654
No 44
>3ltj_A Alpharep-4; protein engineering, heat-like repeat, protein binding; 1.80A {Synthetic}
Probab=95.88 E-value=0.033 Score=39.51 Aligned_cols=83 Identities=7% Similarity=0.071 Sum_probs=60.6
Q ss_pred HHHHHHHHHhhcCChHHHHHHHHHHhhhhccCCCcHHHHHhhcchhHHHHhhcCCcHHHHHHHhhhhhhcccChhhHHHH
Q 033071 21 QYLQELVSQFQNSTDEERKEKIVANLANFAYDPYNYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNASVDPANAAII 100 (128)
Q Consensus 21 eyLq~LV~Efq~t~~~eakeqvlAnLaNFAyDP~N~~~Lrql~vidlFld~L~~~n~~l~efaiggLcNlclDp~n~~~I 100 (128)
+.+..|+.-+. .++.+.|..++..|+++.. -.+++.++.+|.++++.+...|+-+|.++.-
T Consensus 76 ~~~~~L~~~l~-d~~~~vr~~a~~aL~~~~~----------~~~~~~L~~~l~d~~~~vr~~a~~aL~~~~~-------- 136 (201)
T 3ltj_A 76 RAVEPLIKALK-DEDGWVRQSAAVALGQIGD----------ERAVEPLIKALKDEDWFVRIAAAFALGEIGD-------- 136 (201)
T ss_dssp GGHHHHHHHTT-CSSHHHHHHHHHHHHHHCC----------GGGHHHHHHHTTCSSHHHHHHHHHHHHHHTC--------
T ss_pred HHHHHHHHHHc-CCCHHHHHHHHHHHHHhCc----------HHHHHHHHHHHcCCCHHHHHHHHHHHHHhCC--------
Confidence 56777777774 4677888888888988753 2478888889988999999999888888742
Q ss_pred HhcCChhhHHhhhcCCChhhhhhc
Q 033071 101 TKSGGIPLIIECLSSPVRNTVNQR 124 (128)
Q Consensus 101 ~~~ggi~~i~~~LsS~~e~tVl~a 124 (128)
.+.++.++.+|.++++++...|
T Consensus 137 --~~~~~~L~~~l~d~~~~vr~~A 158 (201)
T 3ltj_A 137 --ERAVEPLIKALKDEDGWVRQSA 158 (201)
T ss_dssp --GGGHHHHHHHTTCSSHHHHHHH
T ss_pred --HHHHHHHHHHHcCCCHHHHHHH
Confidence 2346667777777766555444
No 45
>1te4_A Conserved protein MTH187; methanobacterium thermoautotrophicum, structural proteomics, heat-like repeat; NMR {Methanothermobacterthermautotrophicus} SCOP: a.118.1.16
Probab=95.52 E-value=0.031 Score=37.99 Aligned_cols=82 Identities=6% Similarity=0.006 Sum_probs=64.5
Q ss_pred HHHHHHHhhcCChHHHHHHHHHHhhhhccCCCcHHHHHhhcchhHHHHhhcCCcHHHHHHHhhhhhhcccChhhHHHHHh
Q 033071 23 LQELVSQFQNSTDEERKEKIVANLANFAYDPYNYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNASVDPANAAIITK 102 (128)
Q Consensus 23 Lq~LV~Efq~t~~~eakeqvlAnLaNFAyDP~N~~~Lrql~vidlFld~L~~~n~~l~efaiggLcNlclDp~n~~~I~~ 102 (128)
+..|+.-+. .++.+.|..++..|+++.. -.+++.++..|.++++.+...|+-+|.++. |+
T Consensus 44 ~~~L~~~L~-d~~~~vR~~A~~aL~~~~~----------~~a~~~L~~~L~d~~~~VR~~A~~aL~~~~-~~-------- 103 (131)
T 1te4_A 44 FEPLLESLS-NEDWRIRGAAAWIIGNFQD----------ERAVEPLIKLLEDDSGFVRSGAARSLEQIG-GE-------- 103 (131)
T ss_dssp HHHHHHGGG-CSCHHHHHHHHHHHGGGCS----------HHHHHHHHHHHHHCCTHHHHHHHHHHHHHC-SH--------
T ss_pred HHHHHHHHc-CCCHHHHHHHHHHHHhcCC----------HHHHHHHHHHHcCCCHHHHHHHHHHHHHhC-cH--------
Confidence 466776664 5778899999999999863 246899999999999999999999999886 32
Q ss_pred cCChhhHHhhhcCCChhhhhhcc
Q 033071 103 SGGIPLIIECLSSPVRNTVNQRF 125 (128)
Q Consensus 103 ~ggi~~i~~~LsS~~e~tVl~a~ 125 (128)
..++.++.+|+++++.+...|+
T Consensus 104 -~a~~~L~~~l~d~~~~vr~~A~ 125 (131)
T 1te4_A 104 -RVRAAMEKLAETGTGFARKVAV 125 (131)
T ss_dssp -HHHHHHHHHTTSCCTHHHHHHH
T ss_pred -HHHHHHHHHHhCCCHHHHHHHH
Confidence 3478889999988877655543
No 46
>3grl_A General vesicular transport factor P115; vesicle transport, membrane trafficking, membrane tethering, fusion, snare, RAB GTPase, armadillo repeats; 2.00A {Bos taurus} PDB: 3gq2_A 2w3c_A
Probab=95.31 E-value=0.041 Score=49.76 Aligned_cols=105 Identities=13% Similarity=0.232 Sum_probs=84.2
Q ss_pred ChHHHHHHHHHHhhcCChHHHHHHHHHHhhhhccCCCcHHHHHhhcchhHHHHhhcCC--cHHHHHHHhhhhhhc-ccCh
Q 033071 18 PRLQYLQELVSQFQNSTDEERKEKIVANLANFAYDPYNYTFLRQLNVLELFLDCITEP--NEKLVEFGVGGICNA-SVDP 94 (128)
Q Consensus 18 ~R~eyLq~LV~Efq~t~~~eakeqvlAnLaNFAyDP~N~~~Lrql~vidlFld~L~~~--n~~l~efaiggLcNl-clDp 94 (128)
.=.|++..|+++.+.++-.|-|...+-.|.-|+-| |.----.+.++.+++.|..+ +..++..++-.|+|+ |.|+
T Consensus 18 s~~etI~~L~~Rl~~~tl~eDRR~Av~~Lk~~sk~---y~~~Vg~~~l~~li~~L~~d~~D~e~v~~~LetL~~l~~~~~ 94 (651)
T 3grl_A 18 TEAETIQKLCDRVASSTLLDDRRNAVRALKSLSKK---YRLEVGIQAMEHLIHVLQTDRSDSEIIGYALDTLYNIISNDE 94 (651)
T ss_dssp CHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHTTTT---TTTHHHHHTHHHHHHHHHSCTTCHHHHHHHHHHHHHHHCCC-
T ss_pred ChhhHHHHHHHHHhhccchhHHHHHHHHHHHHHHH---hHHHhhhhhHHHHHHHHhcccccHHHHHHHHHHHHHHhCCCC
Confidence 34689999999999999999999999999999855 43334457899999999875 778999999999996 6664
Q ss_pred h-----------------hHH-HHHhcCChhhHHhhhcCCChhhhhhcc
Q 033071 95 A-----------------NAA-IITKSGGIPLIIECLSSPVRNTVNQRF 125 (128)
Q Consensus 95 ~-----------------n~~-~I~~~ggi~~i~~~LsS~~e~tVl~a~ 125 (128)
. +.+ +|-+.++|+.++++|.+++..+-++|+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~d~f~~~~~~i~~Ll~lL~~~df~vR~~al 143 (651)
T 3grl_A 95 EEEVEENSTRQSEDLGSQFTEIFIKQQENVTLLLSLLEEFDFHVRWPGV 143 (651)
T ss_dssp -------------CHHHHHHHHHHHSTHHHHHHHHHTTCCCHHHHHHHH
T ss_pred cccccccccccchHHHHHHHHHHHcCCccHHHHHHHhcCccHHHHHHHH
Confidence 3 233 344689999999999999988877764
No 47
>3grl_A General vesicular transport factor P115; vesicle transport, membrane trafficking, membrane tethering, fusion, snare, RAB GTPase, armadillo repeats; 2.00A {Bos taurus} PDB: 3gq2_A 2w3c_A
Probab=95.06 E-value=0.058 Score=48.82 Aligned_cols=97 Identities=18% Similarity=0.103 Sum_probs=82.6
Q ss_pred HHHHHHHHhhcCChHHHHHHHHHHhhhhccCCCcHHHHHhh-cchhHHHHhhcCCcH----HHHHHHhhhhhhcc-cChh
Q 033071 22 YLQELVSQFQNSTDEERKEKIVANLANFAYDPYNYTFLRQL-NVLELFLDCITEPNE----KLVEFGVGGICNAS-VDPA 95 (128)
Q Consensus 22 yLq~LV~Efq~t~~~eakeqvlAnLaNFAyDP~N~~~Lrql-~vidlFld~L~~~n~----~l~efaiggLcNlc-lDp~ 95 (128)
.+..||+-. +.+++-.|-..+.=|.+.+-+-.+.+.|-.. |++|.+++++.++.. .+|+-++--|+||. ..|.
T Consensus 167 gi~~Lv~lL-~d~rE~iRneallLL~~Lt~~n~~iQklVAFEnaFe~Lf~Ii~~Eg~~~Ggivv~DCL~ll~nLLr~N~s 245 (651)
T 3grl_A 167 GVSRLMDLL-ADSREVIRNDGVLLLQALTRSNGAIQKIVAFENAFERLLDIITEEGNSDGGIVVEDCLILLQNLLKNNNS 245 (651)
T ss_dssp HHHHHHGGG-GCSSHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHHHTGGGSHHHHHHHHHHHHHHHTTCHH
T ss_pred cHHHHHHHH-hCchHHHHHHHHHHHHHHhcCCHHHHHHHHHhccHHHHHHHHHhcCCCccchhHHHHHHHHHHHHhcCHH
Confidence 455678877 4557888888899999999998888888887 999999999998765 78889999999995 5689
Q ss_pred hHHHHHhcCChhhHHhhhcCCChh
Q 033071 96 NAAIITKSGGIPLIIECLSSPVRN 119 (128)
Q Consensus 96 n~~~I~~~ggi~~i~~~LsS~~e~ 119 (128)
|+.++.|.|+||.+..+|.++.++
T Consensus 246 NQ~~FrEt~~i~~L~~LL~~~~~~ 269 (651)
T 3grl_A 246 NQNFFKEGSYIQRMKPWFEVGDEN 269 (651)
T ss_dssp HHHHHHHTTCGGGGGGGGCCCSCS
T ss_pred HHHHHHHcCCHHHHHHHhCCCccc
Confidence 999999999999999999877654
No 48
>1oyz_A Hypothetical protein YIBA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Escherichia coli} SCOP: a.118.1.16
Probab=94.80 E-value=0.12 Score=38.43 Aligned_cols=47 Identities=17% Similarity=0.163 Sum_probs=25.4
Q ss_pred chhHHHHhhcCCcHHHHHHHhhhhhhcccChhhHHHHHhcCChhhHHhhhcCCChhh
Q 033071 64 VLELFLDCITEPNEKLVEFGVGGICNASVDPANAAIITKSGGIPLIIECLSSPVRNT 120 (128)
Q Consensus 64 vidlFld~L~~~n~~l~efaiggLcNlclDp~n~~~I~~~ggi~~i~~~LsS~~e~t 120 (128)
+++.++..|.++++.+...|+-+|.++.- .+.++.++.+|+++++.+
T Consensus 129 ~~~~L~~~l~d~~~~vR~~a~~aL~~~~~----------~~~~~~L~~~l~d~~~~v 175 (280)
T 1oyz_A 129 IVEQSQITAFDKSTNVRRATAFAISVIND----------KATIPLLINLLKDPNGDV 175 (280)
T ss_dssp HHHHHHHHTTCSCHHHHHHHHHHHHTC-------------CCHHHHHHHHTCSSHHH
T ss_pred HHHHHHHHhhCCCHHHHHHHHHHHHhcCC----------HHHHHHHHHHHcCCCHHH
Confidence 45555555666666666555555555432 135566666666665543
No 49
>1oyz_A Hypothetical protein YIBA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Escherichia coli} SCOP: a.118.1.16
Probab=94.73 E-value=0.1 Score=38.78 Aligned_cols=74 Identities=9% Similarity=0.118 Sum_probs=47.0
Q ss_pred CChHHHHHHHHHHhhhhccCCCcHHHHHhhcchhHHHHhhcCCcHHHHHHHhhhhhhcccChhhHHHHHhcCChhhHHhh
Q 033071 33 STDEERKEKIVANLANFAYDPYNYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNASVDPANAAIITKSGGIPLIIEC 112 (128)
Q Consensus 33 t~~~eakeqvlAnLaNFAyDP~N~~~Lrql~vidlFld~L~~~n~~l~efaiggLcNlclDp~n~~~I~~~ggi~~i~~~ 112 (128)
.++.+.|..++..|+++.. -.+++.++.+|.++++.+...|+-+|.++..+.. ..++.++.+
T Consensus 139 d~~~~vR~~a~~aL~~~~~----------~~~~~~L~~~l~d~~~~vr~~a~~aL~~~~~~~~--------~~~~~L~~~ 200 (280)
T 1oyz_A 139 DKSTNVRRATAFAISVIND----------KATIPLLINLLKDPNGDVRNWAAFAININKYDNS--------DIRDCFVEM 200 (280)
T ss_dssp CSCHHHHHHHHHHHHTC-------------CCHHHHHHHHTCSSHHHHHHHHHHHHHHTCCCH--------HHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhcCC----------HHHHHHHHHHHcCCCHHHHHHHHHHHHhhccCcH--------HHHHHHHHH
Confidence 3445555555555555542 1478889999999999998989888888753321 224566667
Q ss_pred hcCCChhhhhhc
Q 033071 113 LSSPVRNTVNQR 124 (128)
Q Consensus 113 LsS~~e~tVl~a 124 (128)
|+++++++-..|
T Consensus 201 l~d~~~~vR~~A 212 (280)
T 1oyz_A 201 LQDKNEEVRIEA 212 (280)
T ss_dssp TTCSCHHHHHHH
T ss_pred hcCCCHHHHHHH
Confidence 776666554433
No 50
>2vgl_B AP-2 complex subunit beta-1; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Homo sapiens} SCOP: i.23.1.1 PDB: 2jkt_B 2jkr_B* 2xa7_B 1w63_B
Probab=93.53 E-value=0.088 Score=44.58 Aligned_cols=59 Identities=15% Similarity=0.217 Sum_probs=46.9
Q ss_pred cCChHHHHHHHHHHhhhhcc-CCCcHHHHHhhcchhHHHHhhcCCcHHHHHHHhhhhhhcccC
Q 033071 32 NSTDEERKEKIVANLANFAY-DPYNYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNASVD 93 (128)
Q Consensus 32 ~t~~~eakeqvlAnLaNFAy-DP~N~~~Lrql~vidlFld~L~~~n~~l~efaiggLcNlclD 93 (128)
..++...|..++-.|.++.- +|. .+...+.++.+..+|.++++.++..|++.|+.+|-+
T Consensus 131 ~d~~~~VRk~A~~al~~i~~~~p~---~~~~~~~~~~l~~lL~d~d~~V~~~A~~aL~~i~~~ 190 (591)
T 2vgl_B 131 KDEDPYVRKTAAVCVAKLHDINAQ---MVEDQGFLDSLRDLIADSNPMVVANAVAALSEISES 190 (591)
T ss_dssp SCSCHHHHHHHHHHHHHHHHSSCC---CHHHHHHHHHHHHTTSCSCHHHHHHHHHHHHHHTTS
T ss_pred CCCChHHHHHHHHHHHHHHhhChh---hcccccHHHHHHHHhCCCChhHHHHHHHHHHHHHhh
Confidence 46677777777777777754 454 334457889999999999999999999999999865
No 51
>1te4_A Conserved protein MTH187; methanobacterium thermoautotrophicum, structural proteomics, heat-like repeat; NMR {Methanothermobacterthermautotrophicus} SCOP: a.118.1.16
Probab=91.45 E-value=0.013 Score=39.83 Aligned_cols=82 Identities=12% Similarity=0.108 Sum_probs=55.7
Q ss_pred HHHHHHHHHhhcCChHHHHHHHHHHhhhhccCCCcHHHHHhhcchhHHHHhhcCCcHHHHHHHhhhhhhcccChhhHHHH
Q 033071 21 QYLQELVSQFQNSTDEERKEKIVANLANFAYDPYNYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNASVDPANAAII 100 (128)
Q Consensus 21 eyLq~LV~Efq~t~~~eakeqvlAnLaNFAyDP~N~~~Lrql~vidlFld~L~~~n~~l~efaiggLcNlclDp~n~~~I 100 (128)
+++..|+.-.+ .++.+.|..++..|+++... .++.++..|.++++.+...|+-+|.++. |+
T Consensus 12 ~~~~~l~~~L~-~~~~~vR~~A~~~L~~~~~~-----------~~~~L~~~L~d~~~~vR~~A~~aL~~~~-~~------ 72 (131)
T 1te4_A 12 SGLVPRGSHMA-DENKWVRRDVSTALSRMGDE-----------AFEPLLESLSNEDWRIRGAAAWIIGNFQ-DE------ 72 (131)
T ss_dssp ---------CC-SSCCCSSSSCCSSTTSCSST-----------THHHHHHGGGCSCHHHHHHHHHHHGGGC-SH------
T ss_pred ccHHHHHHHhc-CCCHHHHHHHHHHHHHhCch-----------HHHHHHHHHcCCCHHHHHHHHHHHHhcC-CH------
Confidence 45666776663 45667777777788877532 2588899999999999999999999987 22
Q ss_pred HhcCChhhHHhhhcCCChhhhhhc
Q 033071 101 TKSGGIPLIIECLSSPVRNTVNQR 124 (128)
Q Consensus 101 ~~~ggi~~i~~~LsS~~e~tVl~a 124 (128)
..++.++.+|+++++.+-..|
T Consensus 73 ---~a~~~L~~~L~d~~~~VR~~A 93 (131)
T 1te4_A 73 ---RAVEPLIKLLEDDSGFVRSGA 93 (131)
T ss_dssp ---HHHHHHHHHHHHCCTHHHHHH
T ss_pred ---HHHHHHHHHHcCCCHHHHHHH
Confidence 237888999988887765554
No 52
>2vgl_B AP-2 complex subunit beta-1; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Homo sapiens} SCOP: i.23.1.1 PDB: 2jkt_B 2jkr_B* 2xa7_B 1w63_B
Probab=88.81 E-value=0.32 Score=41.10 Aligned_cols=57 Identities=7% Similarity=0.147 Sum_probs=36.3
Q ss_pred hHHHHhhcCCcHHHHHHHhhhhhhcc-cChhhHHHHHhcCChhhHHhhhcCCChhhhhhcc
Q 033071 66 ELFLDCITEPNEKLVEFGVGGICNAS-VDPANAAIITKSGGIPLIIECLSSPVRNTVNQRF 125 (128)
Q Consensus 66 dlFld~L~~~n~~l~efaiggLcNlc-lDp~n~~~I~~~ggi~~i~~~LsS~~e~tVl~a~ 125 (128)
+....+|.++++.+...|+-++.+++ .+|+... +.+-++.+..+|+++++.++.+|+
T Consensus 124 ~~l~~~L~d~~~~VRk~A~~al~~i~~~~p~~~~---~~~~~~~l~~lL~d~d~~V~~~A~ 181 (591)
T 2vgl_B 124 EPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVE---DQGFLDSLRDLIADSNPMVVANAV 181 (591)
T ss_dssp HHHHHHSSCSCHHHHHHHHHHHHHHHHSSCCCHH---HHHHHHHHHHTTSCSCHHHHHHHH
T ss_pred HHHHHHcCCCChHHHHHHHHHHHHHHhhChhhcc---cccHHHHHHHHhCCCChhHHHHHH
Confidence 44566677777777777777777664 3454222 234467788888877777766664
No 53
>1b3u_A Protein (protein phosphatase PP2A); scaffold protein, phosphorylation, heat repeat; 2.30A {Homo sapiens} SCOP: a.118.1.2 PDB: 2ie4_A* 2ie3_A* 2npp_A* 3k7v_A* 3k7w_A* 3fga_A* 2pf4_A 2iae_A 2nym_A* 2nyl_A* 3dw8_A* 2pkg_A 3c5w_A
Probab=87.98 E-value=1.4 Score=35.11 Aligned_cols=69 Identities=3% Similarity=-0.008 Sum_probs=44.7
Q ss_pred HHHHHHHHHhhcCChHHHHHHHHHHhhhhccCCCcHHHHHhhcchhHHHHhhcCCcHHHHHHHhhhhhhcc
Q 033071 21 QYLQELVSQFQNSTDEERKEKIVANLANFAYDPYNYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNAS 91 (128)
Q Consensus 21 eyLq~LV~Efq~t~~~eakeqvlAnLaNFAyDP~N~~~Lrql~vidlFld~L~~~n~~l~efaiggLcNlc 91 (128)
+++-+++..+-+.++...|..++..|..++.......+ .-.+++.|+.++.++++.+.+.|+.+|..++
T Consensus 241 ~~~~~~l~~~~~d~~~~vR~~a~~~l~~l~~~~~~~~~--~~~l~~~l~~~l~d~~~~vr~~a~~~l~~~~ 309 (588)
T 1b3u_A 241 ALVMPTLRQAAEDKSWRVRYMVADKFTELQKAVGPEIT--KTDLVPAFQNLMKDCEAEVRAAASHKVKEFC 309 (588)
T ss_dssp HHTHHHHHHHHTCSSHHHHHHHHHTHHHHHHHHCHHHH--HHTHHHHHHHHHTCSSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHhCcccc--hhHHHHHHHHHhCCCcHHHHHHHHHHHHHHH
Confidence 34444444454555667788888788777653211112 2356899999999999988887776665554
No 54
>2qk2_A LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2, heat repeat, micro plus END, +TIP, protein binding; 2.10A {Drosophila melanogaster}
Probab=86.67 E-value=4.7 Score=29.40 Aligned_cols=94 Identities=12% Similarity=0.179 Sum_probs=67.1
Q ss_pred HHHHHHHHhhcCChHHHHHHHHHHhhhhccCCCcHHHHHhhcchhHHHHhhcCCcHHHHHHHhhhhhhcc--cChh--hH
Q 033071 22 YLQELVSQFQNSTDEERKEKIVANLANFAYDPYNYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNAS--VDPA--NA 97 (128)
Q Consensus 22 yLq~LV~Efq~t~~~eakeqvlAnLaNFAyDP~N~~~Lrql~vidlFld~L~~~n~~l~efaiggLcNlc--lDp~--n~ 97 (128)
.+..|..-+.+ ++...|+.+...|.+++-.. . +. .+++.++..|.+.|+.+.+.+++-|..+. .+|+ ..
T Consensus 99 ilp~ll~~l~d-~~~~vr~~a~~aL~~~~~~~-~---~~--~ll~~l~~~l~~~~~~vr~~~l~~l~~~l~~~~~~~~~~ 171 (242)
T 2qk2_A 99 CVPSLLEKFKE-KKPNVVTALREAIDAIYAST-S---LE--AQQESIVESLSNKNPSVKSETALFIARALTRTQPTALNK 171 (242)
T ss_dssp HHHHHHHGGGC-CCHHHHHHHHHHHHHHHTTS-C---HH--HHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCCGGGCCH
T ss_pred HHHHHHHHHcC-CCHHHHHHHHHHHHHHHHcC-C---HH--HHHHHHHHHHcCCChHHHHHHHHHHHHHHHHcCCCCccH
Confidence 45566666644 56778888888888887543 1 22 46888999999999999999999998853 2344 34
Q ss_pred HHHHhcCChhhHHhhhcCCChhhhhhc
Q 033071 98 AIITKSGGIPLIIECLSSPVRNTVNQR 124 (128)
Q Consensus 98 ~~I~~~ggi~~i~~~LsS~~e~tVl~a 124 (128)
.++-.- +|.+..||..+++++-..|
T Consensus 172 ~~l~~l--~p~l~~~l~D~~~~VR~~A 196 (242)
T 2qk2_A 172 KLLKLL--TTSLVKTLNEPDPTVRDSS 196 (242)
T ss_dssp HHHHHH--HHHHHHHHTSSCHHHHHHH
T ss_pred HHHHHH--HHHHHHHhcCCChHHHHHH
Confidence 455433 8899999988887654443
No 55
>3dad_A FH1/FH2 domain-containing protein 1; formin, FHOD1, GTPase-binding domain, ubiquitin-superfold, armadillo repeats, actin-binding, coiled coil; 2.30A {Homo sapiens}
Probab=85.84 E-value=3 Score=35.00 Aligned_cols=100 Identities=10% Similarity=0.064 Sum_probs=78.9
Q ss_pred HHHHHhhcCChHHHHHHHHHHhhh-hccCCCcHHHHHhhcchhHHHHhhcCCcHHHHHHHhhhhhhcccChhhHHHHH-h
Q 033071 25 ELVSQFQNSTDEERKEKIVANLAN-FAYDPYNYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNASVDPANAAIIT-K 102 (128)
Q Consensus 25 ~LV~Efq~t~~~eakeqvlAnLaN-FAyDP~N~~~Lrql~vidlFld~L~~~n~~l~efaiggLcNlclDp~n~~~I~-~ 102 (128)
.+++-.+.++ .+.+..++..|+. |.-|+.=-.-+-..+-++.++.++.+...+.+.+++.++-+|-..-..-.-|+ .
T Consensus 122 ~iiekL~~~~-~~~lr~aLfsLk~~~q~D~~Fa~EFI~~~GL~~Li~vi~~~~gN~q~Y~L~AL~~LM~~v~Gm~gvvs~ 200 (339)
T 3dad_A 122 AILEKLYSSS-GPELRRSLFSLKQIFQEDKDLVPEFVHSEGLSCLIRVGAAADHNYQSYILRALGQLMLFVDGMLGVVAH 200 (339)
T ss_dssp HHHHHHHHCC-HHHHHHHHHHHHHHHHTCTTHHHHHHHTTHHHHHHHHHTTSCHHHHHHHHHHHHHHTTSHHHHHHHHHC
T ss_pred HHHHHHhcCC-cHHHHHHHHHHHHHhhcchHHHHHHHHhccHHHHHHHHHhcChHHHHHHHHHHHHHHhccccccchhCC
Confidence 5566666544 4557788999999 99887655555566779999999999999999999999999987766666666 4
Q ss_pred cCChhhHHhhhcCCChhhhhhcc
Q 033071 103 SGGIPLIIECLSSPVRNTVNQRF 125 (128)
Q Consensus 103 ~ggi~~i~~~LsS~~e~tVl~a~ 125 (128)
...|..|..+++|....+|..|+
T Consensus 201 ~~fI~~lyslv~s~~~~V~k~AL 223 (339)
T 3dad_A 201 SDTIQWLYTLCASLSRLVVKTAL 223 (339)
T ss_dssp HHHHHHHHHGGGCSCHHHHHHHH
T ss_pred HHHHHHHHHHHcCccHHHHHHHH
Confidence 55788888899988888776664
No 56
>1b3u_A Protein (protein phosphatase PP2A); scaffold protein, phosphorylation, heat repeat; 2.30A {Homo sapiens} SCOP: a.118.1.2 PDB: 2ie4_A* 2ie3_A* 2npp_A* 3k7v_A* 3k7w_A* 3fga_A* 2pf4_A 2iae_A 2nym_A* 2nyl_A* 3dw8_A* 2pkg_A 3c5w_A
Probab=85.69 E-value=2.7 Score=33.49 Aligned_cols=56 Identities=11% Similarity=0.078 Sum_probs=35.5
Q ss_pred cchhHHHHhhcCCcHHHHHHHhhhhhhcccChhhHHHHHhcCChhhHHhhhcCCChhh
Q 033071 63 NVLELFLDCITEPNEKLVEFGVGGICNASVDPANAAIITKSGGIPLIIECLSSPVRNT 120 (128)
Q Consensus 63 ~vidlFld~L~~~n~~l~efaiggLcNlclDp~n~~~I~~~ggi~~i~~~LsS~~e~t 120 (128)
.+++++..++.++++.+...|+.+|..++-.-..... ...-+|.+..+++.+++++
T Consensus 164 ~l~~~l~~l~~d~~~~VR~~a~~~l~~l~~~~~~~~~--~~~l~~~l~~~~~d~~~~v 219 (588)
T 1b3u_A 164 ELRQYFRNLCSDDTPMVRRAAASKLGEFAKVLELDNV--KSEIIPMFSNLASDEQDSV 219 (588)
T ss_dssp HHHHHHHHHHTCSCHHHHHHHHHHHHHHHHTSCHHHH--HHTHHHHHHHHHTCSCHHH
T ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhcHHhH--HHHHHHHHHHHhcCCcHHH
Confidence 4567777778888888888888888777633111111 1233667777777766554
No 57
>1ibr_B P95, importin beta-1 subunit, nuclear factor; small GTPase, nuclear transport receptor, cell cycle, translation; HET: GNP; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1m5n_S 1gcj_A 1f59_A 1o6o_A 1o6p_A
Probab=82.98 E-value=2.7 Score=32.36 Aligned_cols=71 Identities=11% Similarity=0.225 Sum_probs=50.3
Q ss_pred HHHHHHHHHhhcCChHHHHHHHHHHhhhhccCCCc--HHHHHhhcchhHHHHhhcCCcHHHHHHHhhhhhhccc
Q 033071 21 QYLQELVSQFQNSTDEERKEKIVANLANFAYDPYN--YTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNASV 92 (128)
Q Consensus 21 eyLq~LV~Efq~t~~~eakeqvlAnLaNFAyDP~N--~~~Lrql~vidlFld~L~~~n~~l~efaiggLcNlcl 92 (128)
+|+-..+.+.-..++.+.|+.++..|..++-.-.. .+|+.+ +++++++.++.+.++.+...|+..+.++|-
T Consensus 216 ~~l~~~l~~~~~~~~~~vr~~~~~~l~~l~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~~v~~~a~~~l~~~~~ 288 (462)
T 1ibr_B 216 HFIMQVVCEATQCPDTRVRVAALQNLVKIMSLYYQYMETYMGP-ALFAITIEAMKSDIDEVALQGIEFWSNVCD 288 (462)
T ss_dssp HHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHCGGGCTTTTTT-THHHHHHHHHHCSSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHcCCchHHHHHHHHHHHHHHH
Confidence 55333334444567788999999888888743211 134443 678899999999999999999988888764
No 58
>2qk2_A LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2, heat repeat, micro plus END, +TIP, protein binding; 2.10A {Drosophila melanogaster}
Probab=82.27 E-value=5.7 Score=28.94 Aligned_cols=92 Identities=13% Similarity=0.017 Sum_probs=60.4
Q ss_pred HHHHHHHHHHhhcCChHHHHHHHHHHhhhhccCCCc--HHHHHhhcchhHHHHhhcCCcHHHHHHHhhhhhhcccChhhH
Q 033071 20 LQYLQELVSQFQNSTDEERKEKIVANLANFAYDPYN--YTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNASVDPANA 97 (128)
Q Consensus 20 ~eyLq~LV~Efq~t~~~eakeqvlAnLaNFAyDP~N--~~~Lrql~vidlFld~L~~~n~~l~efaiggLcNlclDp~n~ 97 (128)
.+.+..|...+..-++...++.++..|+-+|-.... ..|+. .+++..++.+.++++.+.+.|..+|-+++-....
T Consensus 55 ~~i~~~L~~~l~kd~~~~V~~~a~~~l~~la~~l~~~~~~~~~--~ilp~ll~~l~d~~~~vr~~a~~aL~~~~~~~~~- 131 (242)
T 2qk2_A 55 GALVSALKKVITKDSNVVLVAMAGKCLALLAKGLAKRFSNYAS--ACVPSLLEKFKEKKPNVVTALREAIDAIYASTSL- 131 (242)
T ss_dssp HHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHHHHGGGGHHHHH--HHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTSCH-
T ss_pred HHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhhHHHHHH--HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHcCCH-
Confidence 356777777774346777788888888777743221 22332 4799999999999999999999999888643221
Q ss_pred HHHHhcCChhhHHhhhcCCChh
Q 033071 98 AIITKSGGIPLIIECLSSPVRN 119 (128)
Q Consensus 98 ~~I~~~ggi~~i~~~LsS~~e~ 119 (128)
+.+ ++.+...|++.++.
T Consensus 132 ~~l-----l~~l~~~l~~~~~~ 148 (242)
T 2qk2_A 132 EAQ-----QESIVESLSNKNPS 148 (242)
T ss_dssp HHH-----HHHHHHHTTCSCHH
T ss_pred HHH-----HHHHHHHHcCCChH
Confidence 112 34455556555543
No 59
>4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B*
Probab=78.58 E-value=4.1 Score=35.25 Aligned_cols=100 Identities=6% Similarity=0.079 Sum_probs=65.4
Q ss_pred HHHHHHHhhcCChHHHHHHHHHHhhhhccCCCcHHHHHhh-cchhHHHHhhcCCcHHHHHHHhhhhhhccc-ChhhHHHH
Q 033071 23 LQELVSQFQNSTDEERKEKIVANLANFAYDPYNYTFLRQL-NVLELFLDCITEPNEKLVEFGVGGICNASV-DPANAAII 100 (128)
Q Consensus 23 Lq~LV~Efq~t~~~eakeqvlAnLaNFAyDP~N~~~Lrql-~vidlFld~L~~~n~~l~efaiggLcNlcl-Dp~n~~~I 100 (128)
+..|+.-++ .++.+.|..++..|.+|.-...+ .....+ .+++.++..+.++++.+...|+.+|.+++- .|..-...
T Consensus 176 l~~l~~~l~-~~~~~vR~~A~~aL~~~~~~~~~-~~~~~~~~~l~~l~~~~~d~~~~vr~~a~~~L~~l~~~~~~~~~~~ 253 (852)
T 4fdd_A 176 IPKFLQFFK-HSSPKIRSHAVACVNQFIISRTQ-ALMLHIDSFIENLFALAGDEEPEVRKNVCRALVMLLEVRMDRLLPH 253 (852)
T ss_dssp HHHHTTTTT-CSSHHHHHHHHHHHHTTTTTTCH-HHHTSHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHCHHHHGGG
T ss_pred HHHHHHHhc-CCCHHHHHHHHHHHHHHHhcccH-HHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHhCHHHHHHH
Confidence 444444443 56778999999999998854221 111111 567778888889999999999999999863 33321111
Q ss_pred HhcCChhhHHhhhcCCChhhhhhcc
Q 033071 101 TKSGGIPLIIECLSSPVRNTVNQRF 125 (128)
Q Consensus 101 ~~~ggi~~i~~~LsS~~e~tVl~a~ 125 (128)
++ +-++.+..+++++++++...|+
T Consensus 254 l~-~l~~~l~~~~~~~~~~vr~~a~ 277 (852)
T 4fdd_A 254 MH-NIVEYMLQRTQDQDENVALEAC 277 (852)
T ss_dssp HH-HHHHHHHHHHTCSSHHHHHHHH
T ss_pred HH-HHHHHHHHHccCCcHHHHHHHH
Confidence 11 2366777888888877766554
No 60
>1w63_A Adapter-related protein complex 1 gamma 1 subunit; endocytosis, clathrin adaptor, transport, coated PITS; 4.0A {Mus musculus} SCOP: i.23.1.1
Probab=77.38 E-value=4 Score=34.83 Aligned_cols=57 Identities=9% Similarity=-0.033 Sum_probs=37.6
Q ss_pred chhHHHHhhcCCcHHHHHHHhhhhhhcc-cChhhHHHHHhcCChhhHHhhhcCCChhhhhhcc
Q 033071 64 VLELFLDCITEPNEKLVEFGVGGICNAS-VDPANAAIITKSGGIPLIIECLSSPVRNTVNQRF 125 (128)
Q Consensus 64 vidlFld~L~~~n~~l~efaiggLcNlc-lDp~n~~~I~~~ggi~~i~~~LsS~~e~tVl~a~ 125 (128)
+++....+|.++++.+...|+-++.+++ .+|+..+ +-++.+..+|+.+++.++.+|+
T Consensus 143 l~~~l~~~L~~~~~~VRk~A~~al~~l~~~~p~~v~-----~~~~~l~~lL~D~d~~V~~~Al 200 (618)
T 1w63_A 143 LAGEVEKLLKTSNSYLRKKAALCAVHVIRKVPELME-----MFLPATKNLLNEKNHGVLHTSV 200 (618)
T ss_dssp HHHHHHHHHHSCCHHHHHHHHHHHHHHHHHCGGGGG-----GGGGGTTTSTTCCCHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHChHHHH-----HHHHHHHHHhCCCCHhHHHHHH
Confidence 3555667777777777777777777775 3554332 3466677777777777776664
No 61
>4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B*
Probab=74.66 E-value=3.6 Score=35.60 Aligned_cols=92 Identities=7% Similarity=0.059 Sum_probs=61.3
Q ss_pred HHhhcCChHHHHHHHHHHhhhhccCCCcH--HHHHhhcchhHHHHhhcCCcHHHHHHHhhhhhhcccChh---hHHHHHh
Q 033071 28 SQFQNSTDEERKEKIVANLANFAYDPYNY--TFLRQLNVLELFLDCITEPNEKLVEFGVGGICNASVDPA---NAAIITK 102 (128)
Q Consensus 28 ~Efq~t~~~eakeqvlAnLaNFAyDP~N~--~~Lrql~vidlFld~L~~~n~~l~efaiggLcNlclDp~---n~~~I~~ 102 (128)
.++-.+++...|+.++-.|.+.+--+... +++ -++++.++.+|.++++.+..-|+-.|.++|-+-. ...++-
T Consensus 365 ~~~l~~~~~~~R~aa~~alg~i~~~~~~~~~~~l--~~~l~~l~~~l~d~~~~Vr~~a~~~l~~l~~~~~~~~~~~~~~- 441 (852)
T 4fdd_A 365 KELLFHHEWVVKESGILVLGAIAEGCMQGMIPYL--PELIPHLIQCLSDKKALVRSITCWTLSRYAHWVVSQPPDTYLK- 441 (852)
T ss_dssp HHHHTCSSHHHHHHHHHHHHHTTTTTHHHHGGGH--HHHHHHHHHHTTCSSHHHHHHHHHHHHHTHHHHHHSCTTTTHH-
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHhcchHHHHHHH--HHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhccchHHHHHH-
Confidence 33334567888999888888888654321 122 2578999999999999999988888888774311 112222
Q ss_pred cCChhhHHhhhcCCChhhhhh
Q 033071 103 SGGIPLIIECLSSPVRNTVNQ 123 (128)
Q Consensus 103 ~ggi~~i~~~LsS~~e~tVl~ 123 (128)
+-++.++.+|.++++.+.-.
T Consensus 442 -~ll~~L~~~L~d~~~~vr~~ 461 (852)
T 4fdd_A 442 -PLMTELLKRILDSNKRVQEA 461 (852)
T ss_dssp -HHHHHHHHHHTCSSHHHHHH
T ss_pred -HHHHHHHHHHhCCCHHHHHH
Confidence 33677888888777655433
No 62
>1ibr_B P95, importin beta-1 subunit, nuclear factor; small GTPase, nuclear transport receptor, cell cycle, translation; HET: GNP; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1m5n_S 1gcj_A 1f59_A 1o6o_A 1o6p_A
Probab=72.99 E-value=8.7 Score=29.50 Aligned_cols=67 Identities=6% Similarity=0.136 Sum_probs=50.8
Q ss_pred HHHHHhhcCChHHHHHHHHHHhhhhccCCCc---HHHHHhhcchhHHHHhhcCCcHHHHHHHhhhhhhcccC
Q 033071 25 ELVSQFQNSTDEERKEKIVANLANFAYDPYN---YTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNASVD 93 (128)
Q Consensus 25 ~LV~Efq~t~~~eakeqvlAnLaNFAyDP~N---~~~Lrql~vidlFld~L~~~n~~l~efaiggLcNlclD 93 (128)
..+.++-..++-..|+-++..|+..+..+.. .+++ -.+++.++.+|.++++.+...|+-+|.++|-.
T Consensus 369 ~~l~~~l~~~~~~~r~aal~~l~~l~~~~~~~~~~~~l--~~~~~~l~~~l~d~~~~Vr~~a~~~l~~~~~~ 438 (462)
T 1ibr_B 369 PFIKEHIKNPDWRYRDAAVMAFGCILEGPEPSQLKPLV--IQAMPTLIELMKDPSVVVRDTAAWTVGRICEL 438 (462)
T ss_dssp HHHHHHTTCSSHHHHHHHHHHHHHTSSSSCTTTTCTTT--TTHHHHHHHGGGCSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCChHHHHHHHHHHHHHhcCCcHHHHHHHH--HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHh
Confidence 3334444567788899999999999975431 1233 36899999999999999999999999999844
No 63
>3dad_A FH1/FH2 domain-containing protein 1; formin, FHOD1, GTPase-binding domain, ubiquitin-superfold, armadillo repeats, actin-binding, coiled coil; 2.30A {Homo sapiens}
Probab=71.79 E-value=1.7 Score=36.47 Aligned_cols=58 Identities=9% Similarity=0.010 Sum_probs=47.2
Q ss_pred HhhcCCcHHHHHHHhhhhhh-cccChhhHHHHHhcCChhhHHhhhcCCChhhhhhcccC
Q 033071 70 DCITEPNEKLVEFGVGGICN-ASVDPANAAIITKSGGIPLIIECLSSPVRNTVNQRFLP 127 (128)
Q Consensus 70 d~L~~~n~~l~efaiggLcN-lclDp~n~~~I~~~ggi~~i~~~LsS~~e~tVl~a~t~ 127 (128)
+-|.+++..-...++=-|-. +.-|++-....+..+|+..|+........++-.|+++.
T Consensus 125 ekL~~~~~~~lr~aLfsLk~~~q~D~~Fa~EFI~~~GL~~Li~vi~~~~gN~q~Y~L~A 183 (339)
T 3dad_A 125 EKLYSSSGPELRRSLFSLKQIFQEDKDLVPEFVHSEGLSCLIRVGAAADHNYQSYILRA 183 (339)
T ss_dssp HHHHHCCHHHHHHHHHHHHHHHHTCTTHHHHHHHTTHHHHHHHHHTTSCHHHHHHHHHH
T ss_pred HHHhcCCcHHHHHHHHHHHHHhhcchHHHHHHHHhccHHHHHHHHHhcChHHHHHHHHH
Confidence 44555666666666666666 66799999999999999999999999999999888864
No 64
>1w63_A Adapter-related protein complex 1 gamma 1 subunit; endocytosis, clathrin adaptor, transport, coated PITS; 4.0A {Mus musculus} SCOP: i.23.1.1
Probab=71.06 E-value=13 Score=31.57 Aligned_cols=87 Identities=14% Similarity=0.140 Sum_probs=57.5
Q ss_pred HHHHHHHHHhhcCChHHHHHHHHHHhhhhcc-CCCcHHHHHhhcchhHHHHhhcCCcHHHHHHHhhhhhhcccC-hhhHH
Q 033071 21 QYLQELVSQFQNSTDEERKEKIVANLANFAY-DPYNYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNASVD-PANAA 98 (128)
Q Consensus 21 eyLq~LV~Efq~t~~~eakeqvlAnLaNFAy-DP~N~~~Lrql~vidlFld~L~~~n~~l~efaiggLcNlclD-p~n~~ 98 (128)
+++-..|..+-..++...|..++-.|.++.- +|. .+. +.++...++|.++|+.++..|+..|+-+|-+ |+..+
T Consensus 141 ~~l~~~l~~~L~~~~~~VRk~A~~al~~l~~~~p~---~v~--~~~~~l~~lL~D~d~~V~~~Al~~L~~i~~~~~~~~~ 215 (618)
T 1w63_A 141 RDLAGEVEKLLKTSNSYLRKKAALCAVHVIRKVPE---LME--MFLPATKNLLNEKNHGVLHTSVVLLTEMCERSPDMLA 215 (618)
T ss_dssp HHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHCGG---GGG--GGGGGTTTSTTCCCHHHHHHHHHHHHHHCCSHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHChH---HHH--HHHHHHHHHhCCCCHhHHHHHHHHHHHHHHhChHHHH
Confidence 3434444444456677777777777776653 453 222 6777788899999999999999999999854 55434
Q ss_pred HHHhcCChhhHHhhhc
Q 033071 99 IITKSGGIPLIIECLS 114 (128)
Q Consensus 99 ~I~~~ggi~~i~~~Ls 114 (128)
.+. .-+|.+++.|.
T Consensus 216 ~~~--~~v~~l~~~L~ 229 (618)
T 1w63_A 216 HFR--KLVPQLVRILK 229 (618)
T ss_dssp HHH--TTHHHHHHHHH
T ss_pred HHH--HHHHHHHHHHH
Confidence 443 33666666554
No 65
>1u6g_C TIP120 protein, CAND1; cullin repeat, heat repeat, ring finger, ligase; 3.10A {Homo sapiens} SCOP: a.118.1.2 PDB: 4a0c_A
Probab=70.57 E-value=17 Score=32.85 Aligned_cols=93 Identities=12% Similarity=0.138 Sum_probs=61.8
Q ss_pred HHHHHHHHhhcCChHHHHHHHHHHhhhhccCC-CcHHHHHhhcchhHHHHhhcCCcHHHHHHHhhhhhhcc--cChhhHH
Q 033071 22 YLQELVSQFQNSTDEERKEKIVANLANFAYDP-YNYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNAS--VDPANAA 98 (128)
Q Consensus 22 yLq~LV~Efq~t~~~eakeqvlAnLaNFAyDP-~N~~~Lrql~vidlFld~L~~~n~~l~efaiggLcNlc--lDp~n~~ 98 (128)
-|..|.... .+++.+.|.+.+..|.|.--.| ...+.-..-.+++.+++.|.++++.+...|+-.|++++ +.+....
T Consensus 7 ~l~~lL~~l-~s~d~~~R~~A~~~L~~~l~~~~~~~~~~~~~~il~~Ll~~L~d~~~~vR~~A~~~L~~l~~~~~~~~~~ 85 (1230)
T 1u6g_C 7 HISNLLEKM-TSSDKDFRFMATNDLMTELQKDSIKLDDDSERKVVKMILKLLEDKNGEVQNLAVKCLGPLVSKVKEYQVE 85 (1230)
T ss_dssp HHHHHHHHT-TCSSHHHHHHHHHHHHHHTSSSCCSCCTTHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHTTSCHHHHH
T ss_pred HHHHHHHhc-CCCCHhHHHHHHHHHHHHHcccccCCChhHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHhCCHHHHH
Confidence 356677776 4667788888888888764332 21111112267888899999999999999988888875 3343333
Q ss_pred HHHhcCChhhHHhhhcCCChhh
Q 033071 99 IITKSGGIPLIIECLSSPVRNT 120 (128)
Q Consensus 99 ~I~~~ggi~~i~~~LsS~~e~t 120 (128)
.| ++.+...|.++++.+
T Consensus 86 ~i-----~~~Ll~~l~d~~~~v 102 (1230)
T 1u6g_C 86 TI-----VDTLCTNMLSDKEQL 102 (1230)
T ss_dssp HH-----HHHHHHHTTCSSSHH
T ss_pred HH-----HHHHHHHhcCCcHHH
Confidence 33 356777777777654
No 66
>3u0r_A Apoptosis inhibitor 5; heat repeat, armadillo repeat, lysine acetylation; 2.50A {Homo sapiens} PDB: 3v6a_A
Probab=70.07 E-value=3.9 Score=36.19 Aligned_cols=88 Identities=10% Similarity=0.088 Sum_probs=59.1
Q ss_pred ChHHHHHHHHHHhhcCChHHHHHHHHHHhhhhccCCCcHHHHHhhcchhHHHHhhcCCcHHHHHHHhhhhhhcccChhhH
Q 033071 18 PRLQYLQELVSQFQNSTDEERKEKIVANLANFAYDPYNYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNASVDPANA 97 (128)
Q Consensus 18 ~R~eyLq~LV~Efq~t~~~eakeqvlAnLaNFAyDP~N~~~Lrql~vidlFld~L~~~n~~l~efaiggLcNlclDp~n~ 97 (128)
..-+|..=|-. ...+...|+=..-++.-|--+ ++-|. =.++|-.+|+..+++..+.-.||.||..+|-| ++-
T Consensus 27 ~~~~y~~Il~~---~kg~~k~K~LaaQ~I~kffk~---FP~l~-~~Ai~a~lDLcEDed~~IR~qaik~Lp~~ck~-~~i 98 (507)
T 3u0r_A 27 HKDAYQVILDG---VKGGTKEKRLAAQFIPKFFKH---FPELA-DSAINAQLDLCEDEDVSIRRQAIKELPQFATG-ENL 98 (507)
T ss_dssp GHHHHHHHHHG---GGSCHHHHHHHHHHHHHHGGG---CGGGH-HHHHHHHHHHHTCSSHHHHHHHHHHGGGGCCT-TCH
T ss_pred cHHHHHHHHHh---cCCCHHHHHHHHHHHHHHHhh---ChhhH-HHHHHHHHHHHhcccHHHHHHHHHhhHHHhhh-hhh
Confidence 34445443332 233455565555566666432 12222 27899999999999999999999999999999 553
Q ss_pred HHHHhcCChhhHHhhhcCCCh
Q 033071 98 AIITKSGGIPLIIECLSSPVR 118 (128)
Q Consensus 98 ~~I~~~ggi~~i~~~LsS~~e 118 (128)
.-| +..+.++|.+...
T Consensus 99 ~ki-----aDvL~QlLqtdd~ 114 (507)
T 3u0r_A 99 PRV-----ADILTQLLQTDDS 114 (507)
T ss_dssp HHH-----HHHHHHHTTCCCH
T ss_pred hhH-----HHHHHHHHhccch
Confidence 333 4578899997653
No 67
>2vgl_A Adaptor protein complex AP-2, alpha 2 subunit; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Rattus norvegicus} PDB: 2xa7_A 2jkr_A 2jkt_A
Probab=69.15 E-value=31 Score=29.64 Aligned_cols=83 Identities=11% Similarity=0.176 Sum_probs=57.6
Q ss_pred cCChHHHHHHHHHHhhhhccCCCcHHHHHhhcchhHHHHhhc-CCcHHHHHHHhhhhhhcccChhhHHHHHhcCChhhHH
Q 033071 32 NSTDEERKEKIVANLANFAYDPYNYTFLRQLNVLELFLDCIT-EPNEKLVEFGVGGICNASVDPANAAIITKSGGIPLII 110 (128)
Q Consensus 32 ~t~~~eakeqvlAnLaNFAyDP~N~~~Lrql~vidlFld~L~-~~n~~l~efaiggLcNlclDp~n~~~I~~~ggi~~i~ 110 (128)
.+++.+.|-.++-+|..++.--.....+. ...+.|+.||. +++..+...|+--|..+| ++.|.+.|++ .+.
T Consensus 339 ~~~~~niry~aL~~l~~l~~~~~~~~~~~--~~~~~i~~~L~~d~d~~Ir~~aL~lL~~l~-~~~Nv~~Iv~-----eL~ 410 (621)
T 2vgl_A 339 QHRETNLRYLALESMCTLASSEFSHEAVK--THIETVINALKTERDVSVRQRAVDLLYAMC-DRSNAQQIVA-----EML 410 (621)
T ss_dssp SCSCHHHHHHHHHHHHHHTTCTTTHHHHH--TTHHHHHHHHTTCCCHHHHHHHHHHHHHHC-CHHHHHHHHH-----HHH
T ss_pred cCCCcchHHHHHHHHHHHHhccCcHHHHH--HHHHHHHHHhccCCCHhHHHHHHHHHHHHc-ChhhHHHHHH-----HHH
Confidence 45677888888888887775421223332 35678899999 899999999999898887 6778777764 355
Q ss_pred hhhcCCChhhhh
Q 033071 111 ECLSSPVRNTVN 122 (128)
Q Consensus 111 ~~LsS~~e~tVl 122 (128)
..+++.+.+.+.
T Consensus 411 ~yl~~~d~~~~~ 422 (621)
T 2vgl_A 411 SYLETADYSIRE 422 (621)
T ss_dssp HHHHHCCHHHHH
T ss_pred HHHHhcCHHHHH
Confidence 555555555443
No 68
>3b2a_A TON_1937, putative uncharacterized protein; heat-repeats, hypothetical, unknown function; 2.20A {Thermococcus onnurineus}
Probab=68.65 E-value=4.7 Score=33.04 Aligned_cols=61 Identities=15% Similarity=0.131 Sum_probs=50.6
Q ss_pred chhHHHHhhcCCcHHHHHHHhhhhhhcc--cChhhHHHHHhcCChhhHHhhhcCCChhhhhhcc
Q 033071 64 VLELFLDCITEPNEKLVEFGVGGICNAS--VDPANAAIITKSGGIPLIIECLSSPVRNTVNQRF 125 (128)
Q Consensus 64 vidlFld~L~~~n~~l~efaiggLcNlc--lDp~n~~~I~~~ggi~~i~~~LsS~~e~tVl~a~ 125 (128)
.+.+.+.+|.+.|+.++..|.-.|=++- .|..-+..+++ .+++-|++++++++|-+.++|+
T Consensus 34 ~l~~L~~LL~dkD~~vk~raL~~LeellK~~~~~l~~~~~e-~~Ld~iI~llk~~dEkval~A~ 96 (265)
T 3b2a_A 34 ALFLILELAGEDDETTRLRAFVALGEILKRADSDLRMMVLE-RHLDVFINALSQENEKVTIKAL 96 (265)
T ss_dssp HHHHHHHHTTSSCHHHHHHHHHHHHHHHHHSCHHHHHHHHH-HHHHHHHHTCCSTTHHHHHHHH
T ss_pred HHHHHHHHHhccchHHHHHHHHHHHHHHHhccccccHHHHH-HHHHHHHHHHhccchhHHHHHH
Confidence 4667788899999999999999999985 44555556665 3699999999999999999886
No 69
>2bpt_A Importin beta-1 subunit; nuclear transport, nucleocytoplasmic transport, nuclear trafficking, importin- beta, complex; 1.99A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 2bku_B 3ea5_B* 3nd2_A
Probab=67.92 E-value=11 Score=31.74 Aligned_cols=88 Identities=10% Similarity=0.143 Sum_probs=55.1
Q ss_pred HHHHhhcCChHHHHHHHHHHhhhhccCC--CcHHHHHhhcchhHHHHhhcCCcHHHHHHHhhhhhhcc--cChhhHHHHH
Q 033071 26 LVSQFQNSTDEERKEKIVANLANFAYDP--YNYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNAS--VDPANAAIIT 101 (128)
Q Consensus 26 LV~Efq~t~~~eakeqvlAnLaNFAyDP--~N~~~Lrql~vidlFld~L~~~n~~l~efaiggLcNlc--lDp~n~~~I~ 101 (128)
++.-++..+.+..|+.++.-+++++.-. .=.+|+.+ +++.++..|..+++.+..-|++.+.+++ ++...+.++-
T Consensus 602 l~~~l~~~~~~~v~~~~~~~l~~l~~~~~~~~~~~l~~--i~~~l~~~l~~~~~~vr~~a~~~l~~l~~~~~~~~~~~~~ 679 (861)
T 2bpt_A 602 FFRLLEKKDSAFIEDDVFYAISALAASLGKGFEKYLET--FSPYLLKALNQVDSPVSITAVGFIADISNSLEEDFRRYSD 679 (861)
T ss_dssp HHHHHHSTTGGGTHHHHHHHHHHHHHHHGGGGHHHHHH--HHHHHHHHHHCTTSHHHHHHHHHHHHHHHHTGGGGHHHHH
T ss_pred HHHHHccCCCCcHHHHHHHHHHHHHHHHhhhHHHHHHH--HHHHHHHHhccccHHHHHHHHHHHHHHHHHhchhccchHH
Confidence 3333444332267888877777776432 12245544 7889999998888888888888777765 3333333433
Q ss_pred hcCChhhHHhhhcCCC
Q 033071 102 KSGGIPLIIECLSSPV 117 (128)
Q Consensus 102 ~~ggi~~i~~~LsS~~ 117 (128)
. =++.+..+|++++
T Consensus 680 ~--l~~~l~~~l~~~~ 693 (861)
T 2bpt_A 680 A--MMNVLAQMISNPN 693 (861)
T ss_dssp H--HHHHHHHHHHCTT
T ss_pred H--HHHHHHHHhCCcc
Confidence 2 2667778888764
No 70
>4ffb_C Protein STU2; tubulin fold, heat repeats, cytoskeleton, microtubule, tubul domain, hydrolase; HET: GTP; 2.88A {Saccharomyces cerevisiae}
Probab=64.52 E-value=8.6 Score=28.90 Aligned_cols=59 Identities=22% Similarity=0.240 Sum_probs=33.2
Q ss_pred ChHHHHHHHHHHhhcCChHHHHHHHHHHhhhhccCCCcHHHHHhhcchhHHHHhhcCCcHHHHHHHhhhhhhcc
Q 033071 18 PRLQYLQELVSQFQNSTDEERKEKIVANLANFAYDPYNYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNAS 91 (128)
Q Consensus 18 ~R~eyLq~LV~Efq~t~~~eakeqvlAnLaNFAyDP~N~~~Lrql~vidlFld~L~~~n~~l~efaiggLcNlc 91 (128)
.|.+.++.|...|+.+........+..- -...+++|--++.+.|..+++-|+-.|+-++
T Consensus 25 ~R~eale~l~~~~~~~~~~~~~~~~~~~---------------~~~~~~~lkk~l~DsN~~v~~~al~~l~~~~ 83 (278)
T 4ffb_C 25 ARLEAYKELNQLFRNSVGDISRDDNIQI---------------YWRDPTLFAQYITDSNVVAQEQAIVALNSLI 83 (278)
T ss_dssp HHHHHHHHHHHHHHTC----------CC---------------TTSCTHHHHHHTTCSSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhCcccccchhHHHH---------------HHHHHHHHHHHhccchHHHHHHHHHHHHHHH
Confidence 5677777777777655544433322111 1245667777888888888888877776553
No 71
>2qk1_A Protein STU2; STU2P, XMAP215, DIS1, TOG, CH-TOG, heat repeat, microtubule plus END, +TIP, protein binding; 1.70A {Saccharomyces cerevisiae}
Probab=63.37 E-value=19 Score=27.20 Aligned_cols=98 Identities=11% Similarity=0.102 Sum_probs=65.8
Q ss_pred HHHHHHHHHhhcCChHHHHHHHHHHhhhhcc--CCCcHHH--HHhhcchhHHHHhhcCCcHHHHHHHhhhhhhcccC-hh
Q 033071 21 QYLQELVSQFQNSTDEERKEKIVANLANFAY--DPYNYTF--LRQLNVLELFLDCITEPNEKLVEFGVGGICNASVD-PA 95 (128)
Q Consensus 21 eyLq~LV~Efq~t~~~eakeqvlAnLaNFAy--DP~N~~~--Lrql~vidlFld~L~~~n~~l~efaiggLcNlclD-p~ 95 (128)
..|..|++.+.+ +....++.+.+.|-+|+- +| +..+ |.. +++-++..|++.|+.+.+-++..|..++-- +.
T Consensus 104 ~llp~ll~~l~d-kk~~V~~aa~~al~~i~~~~~~-~~~~~~l~~--ll~~l~~~l~~k~~~vk~~al~~l~~~~~~~~~ 179 (249)
T 2qk1_A 104 LVFTPLLDRTKE-KKPSVIEAIRKALLTICKYYDP-LASSGRNED--MLKDILEHMKHKTPQIRMECTQLFNASMKEEKD 179 (249)
T ss_dssp HHHHHHHHGGGC-CCHHHHHHHHHHHHHHHHHSCT-TCTTCTTHH--HHHHHHHHTTCSSHHHHHHHHHHHHHHHHHCCS
T ss_pred HHHHHHHHHHcC-CCHHHHHHHHHHHHHHHHHccc-cccCCcHHH--HHHHHHHHHcCCChHHHHHHHHHHHHHHHHcCC
Confidence 356677887844 446777887787877764 55 2233 444 678888999999999999999888877632 21
Q ss_pred ----hHHHHHhcCChhhHHhhhcCCChhhhhh
Q 033071 96 ----NAAIITKSGGIPLIIECLSSPVRNTVNQ 123 (128)
Q Consensus 96 ----n~~~I~~~ggi~~i~~~LsS~~e~tVl~ 123 (128)
-..++ ...=+|.+..|+..+++++--.
T Consensus 180 ~~~~l~~~l-~~~iip~l~~~l~D~~~~VR~a 210 (249)
T 2qk1_A 180 GYSTLQRYL-KDEVVPIVIQIVNDTQPAIRTI 210 (249)
T ss_dssp CSHHHHHHH-TTTHHHHHHHHHTCSSHHHHHH
T ss_pred cchhHHHHH-HHHHHHHHHHHhcCCCHHHHHH
Confidence 11233 0133788899998887765433
No 72
>3tjz_B Coatomer subunit gamma; protein trafficking, golgi membrane, protein transport-prote binding complex; HET: GNP; 2.90A {Bos taurus}
Probab=62.27 E-value=48 Score=27.23 Aligned_cols=59 Identities=8% Similarity=0.130 Sum_probs=41.7
Q ss_pred cCChHHHHHHHHHHhhhhccCCCcHHHHHhhcchhHHHHhhcCCcHHHHHHHhhhhhhccc-Chh
Q 033071 32 NSTDEERKEKIVANLANFAYDPYNYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNASV-DPA 95 (128)
Q Consensus 32 ~t~~~eakeqvlAnLaNFAyDP~N~~~Lrql~vidlFld~L~~~n~~l~efaiggLcNlcl-Dp~ 95 (128)
+.+.--+|--+++-..=| |.+.+..+ +.++-.-++|.++|+.++-+|++.|+.++- |+.
T Consensus 150 d~~pyVRk~A~l~~~kL~---~~~pe~v~--~~~~~l~~ll~d~n~~V~~~Al~lL~ei~~~d~~ 209 (355)
T 3tjz_B 150 DKVPSVSSSALVSSLHLL---KCSFDVVK--RWVNEAQEAASSDNIMVQYHALGLLYHVRKNDRL 209 (355)
T ss_dssp CSSHHHHHHHHHHHHHHT---TTCHHHHH--TTHHHHHHHTTCSSHHHHHHHHHHHHHHHTTCHH
T ss_pred CCCHHHHHHHHHHHHHHh---ccCHHHHH--HHHHHHHHHhcCCCccHHHHHHHHHHHHHhhchH
Confidence 344455566666544333 44555555 467778888999999999999999999985 663
No 73
>1qgr_A Protein (importin beta subunit); transport receptor, nuclear import, heat motif, NLS-binding; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qgk_A 2p8q_A 2q5d_A 3lww_A 1ukl_A 2qna_A
Probab=61.86 E-value=14 Score=31.08 Aligned_cols=100 Identities=12% Similarity=0.149 Sum_probs=59.0
Q ss_pred HHHHHHHHHhhcCC-hHHHHHHHHHHhhhhccCCCcHHHHHh--hcchhHHHHhhcCC--cHHHHHHHhhhhhhccc--C
Q 033071 21 QYLQELVSQFQNST-DEERKEKIVANLANFAYDPYNYTFLRQ--LNVLELFLDCITEP--NEKLVEFGVGGICNASV--D 93 (128)
Q Consensus 21 eyLq~LV~Efq~t~-~~eakeqvlAnLaNFAyDP~N~~~Lrq--l~vidlFld~L~~~--n~~l~efaiggLcNlcl--D 93 (128)
+.++.|+.-.+..+ +...|+.++.-|..+..+- ..+.+.. -.+++.|+.+|..+ ++.+..-|+.+|++++- +
T Consensus 128 ~ll~~l~~~l~~~~~~~~~r~~al~~l~~l~~~~-~~~~~~~~~~~ll~~l~~~l~~~~~~~~vr~~a~~~l~~~~~~~~ 206 (876)
T 1qgr_A 128 ELIPQLVANVTNPNSTEHMKESTLEAIGYICQDI-DPEQLQDKSNEILTAIIQGMRKEEPSNNVKLAATNALLNSLEFTK 206 (876)
T ss_dssp THHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHS-CHHHHGGGHHHHHHHHHHHHSTTCSCHHHHHHHHHHHHHHGGGCH
T ss_pred HHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhc-CHhhHHhHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 45666666554432 6788888888888776431 1112222 15678899999887 68888889999998762 2
Q ss_pred hhhHHHHHhcCChhhHHhhhcCCChhhh
Q 033071 94 PANAAIITKSGGIPLIIECLSSPVRNTV 121 (128)
Q Consensus 94 p~n~~~I~~~ggi~~i~~~LsS~~e~tV 121 (128)
+..........=++.+..++.++++++-
T Consensus 207 ~~~~~~~~~~~il~~l~~~~~~~~~~vr 234 (876)
T 1qgr_A 207 ANFDKESERHFIMQVVCEATQCPDTRVR 234 (876)
T ss_dssp HHHTSHHHHHHHHHHHHHHTTCSSHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHcCCCCHHHH
Confidence 2111111100114455666666665543
No 74
>1u6g_C TIP120 protein, CAND1; cullin repeat, heat repeat, ring finger, ligase; 3.10A {Homo sapiens} SCOP: a.118.1.2 PDB: 4a0c_A
Probab=57.96 E-value=13 Score=33.66 Aligned_cols=92 Identities=14% Similarity=0.089 Sum_probs=60.6
Q ss_pred HHHHHHHHHhhcCChHHHHHHHHHHhhhhccC-CC-cHHHHHhhcchhHHHHhhcCCcHHHHHHHhhhhhhcccChhhHH
Q 033071 21 QYLQELVSQFQNSTDEERKEKIVANLANFAYD-PY-NYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNASVDPANAA 98 (128)
Q Consensus 21 eyLq~LV~Efq~t~~~eakeqvlAnLaNFAyD-P~-N~~~Lrql~vidlFld~L~~~n~~l~efaiggLcNlclDp~n~~ 98 (128)
+-+..|..-+.++++.+.|+.++..|..++.+ |. =-+|+ -.+++.|+..|..+++.+.+.|+.+|..++.-....
T Consensus 133 ~llp~L~~~l~~~~~~~~~~~al~~l~~~~~~~~~~l~~~~--~~ll~~l~~~L~~~~~~vR~~a~~al~~l~~~~~~~- 209 (1230)
T 1u6g_C 133 KITGRLTSAIAKQEDVSVQLEALDIMADMLSRQGGLLVNFH--PSILTCLLPQLTSPRLAVRKRTIIALGHLVMSCGNI- 209 (1230)
T ss_dssp HHHHHHHHHHSCCSCHHHHHHHHHHHHHHHHHTCSSCTTTH--HHHHHHHGGGGGCSSHHHHHHHHHHHHHHTTTC----
T ss_pred HHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHhHhHHHHHH--HHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHhcCHH-
Confidence 44555566665467789999999999998743 11 01233 357889999999999999999999998887442211
Q ss_pred HHHhcCChhhHHhhhcCCC
Q 033071 99 IITKSGGIPLIIECLSSPV 117 (128)
Q Consensus 99 ~I~~~ggi~~i~~~LsS~~ 117 (128)
++. .-++.+++.|.++.
T Consensus 210 -~~~-~~l~~l~~~L~~~~ 226 (1230)
T 1u6g_C 210 -VFV-DLIEHLLSELSKND 226 (1230)
T ss_dssp --CT-THHHHHHHHHHHTC
T ss_pred -HHH-HHHHHHHHHhccCC
Confidence 121 22666777776553
No 75
>2bpt_A Importin beta-1 subunit; nuclear transport, nucleocytoplasmic transport, nuclear trafficking, importin- beta, complex; 1.99A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 2bku_B 3ea5_B* 3nd2_A
Probab=57.15 E-value=43 Score=28.08 Aligned_cols=81 Identities=10% Similarity=0.099 Sum_probs=51.4
Q ss_pred cCChHHHHHHHHHHhhhhccCCC--c-HHHHHhhcchhHHHHhhcCCcHHHHHHHhhhhhhcccC--hh--hHHHHHhcC
Q 033071 32 NSTDEERKEKIVANLANFAYDPY--N-YTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNASVD--PA--NAAIITKSG 104 (128)
Q Consensus 32 ~t~~~eakeqvlAnLaNFAyDP~--N-~~~Lrql~vidlFld~L~~~n~~l~efaiggLcNlclD--p~--n~~~I~~~g 104 (128)
..++...|+.++..|++.+..+. . .+++. .+++.++..+.++++.+...++-+|.++|-. +. ..+++-.
T Consensus 379 ~~~~~~~r~~a~~~l~~i~~~~~~~~~~~~l~--~il~~l~~~l~d~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~~~-- 454 (861)
T 2bpt_A 379 TADNWRNREAAVMAFGSIMDGPDKVQRTYYVH--QALPSILNLMNDQSLQVKETTAWCIGRIADSVAESIDPQQHLPG-- 454 (861)
T ss_dssp TCSSHHHHHHHHHHHHHTSSSSCHHHHHHHHH--HHHHHHHHGGGCSCHHHHHHHHHHHHHHHHHHGGGSCTTTTHHH--
T ss_pred CCCChhHHHHHHHHHHHHHcCCCHHHHHHHHH--HHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHhhhhcCCHHHHHH--
Confidence 35567789999999999986543 1 12333 5788999999999998887766555555422 10 0112211
Q ss_pred ChhhHHhhhcCC
Q 033071 105 GIPLIIECLSSP 116 (128)
Q Consensus 105 gi~~i~~~LsS~ 116 (128)
-++.+..+|+++
T Consensus 455 ~l~~l~~~l~~~ 466 (861)
T 2bpt_A 455 VVQACLIGLQDH 466 (861)
T ss_dssp HHHHHHHHHTSC
T ss_pred HHHHHHHHhccC
Confidence 256677777665
No 76
>2vgl_A Adaptor protein complex AP-2, alpha 2 subunit; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Rattus norvegicus} PDB: 2xa7_A 2jkr_A 2jkt_A
Probab=56.27 E-value=54 Score=28.14 Aligned_cols=96 Identities=14% Similarity=0.136 Sum_probs=63.3
Q ss_pred CCCChHHHHHHHHHHh----------------hcCChHHHHHHHHHHhhhhccCCCcHHHHHhhcchhHHHHhhcCCcHH
Q 033071 15 SGTPRLQYLQELVSQF----------------QNSTDEERKEKIVANLANFAYDPYNYTFLRQLNVLELFLDCITEPNEK 78 (128)
Q Consensus 15 ~g~~R~eyLq~LV~Ef----------------q~t~~~eakeqvlAnLaNFAyDP~N~~~Lrql~vidlFld~L~~~n~~ 78 (128)
++..|.+|++.|+--+ =.+++.+.|.-+-=-+.+++ ..|-+.+ +=++..|..-|.++|+.
T Consensus 51 ~~~~k~~~l~Kli~l~~~G~d~s~~~~~vvkl~~s~~~~~Krl~YL~l~~~~--~~~~e~~--~L~iN~l~kDl~~~n~~ 126 (621)
T 2vgl_A 51 DGYSKKKYVCKLLFIFLLGHDIDFGHMEAVNLLSSNRYTEKQIGYLFISVLV--NSNSELI--RLINNAIKNDLASRNPT 126 (621)
T ss_dssp CHHHHHHHHHHHHHHHHHSCCCCSCHHHHHHGGGCSCHHHHHHHHHHHHHSC--CCCHHHH--HHHHHHHHHHHHSCCHH
T ss_pred CHHHHHHHHHHHHHHHHcCCCCchhHHHHHHHhcCCCHHHHHHHHHHHHHHc--cCCcHHH--HHHHHHHHHhcCCCCHH
Confidence 3445777777665432 23556666666655566655 3333333 33566677778899999
Q ss_pred HHHHHhhhhhhcccChhhHHHHHhcCChhhHHhhh--cCCChhh
Q 033071 79 LVEFGVGGICNASVDPANAAIITKSGGIPLIIECL--SSPVRNT 120 (128)
Q Consensus 79 l~efaiggLcNlclDp~n~~~I~~~ggi~~i~~~L--sS~~e~t 120 (128)
+.-.|+-+|||++ +|+-.+.+ ++.|.+|| +++++-+
T Consensus 127 ir~lALr~L~~i~-~~e~~~~l-----~~~v~~~l~~~d~~~~V 164 (621)
T 2vgl_A 127 FMGLALHCIANVG-SREMAEAF-----AGEIPKILVAGDTMDSV 164 (621)
T ss_dssp HHHHHHHHHHHHC-CHHHHHHH-----TTHHHHHHHCSSSCHHH
T ss_pred HHHHHHHHhhccC-CHHHHHHH-----HHHHHHHHhCCCCCHHH
Confidence 9999999999996 46655544 57889999 6666654
No 77
>2x19_B Importin-13; nuclear transport, protein transport; HET: GTP; 2.80A {Homo sapiens} PDB: 2xwu_B
Probab=53.45 E-value=42 Score=29.15 Aligned_cols=75 Identities=15% Similarity=0.214 Sum_probs=51.7
Q ss_pred HHHHHHHHHHhhcCChHHHHHHHHHHhhhhccCCCcHHHHHhhcchhHHHHhhcCCcHHHHHHHhhhhhhc------ccC
Q 033071 20 LQYLQELVSQFQNSTDEERKEKIVANLANFAYDPYNYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNA------SVD 93 (128)
Q Consensus 20 ~eyLq~LV~Efq~t~~~eakeqvlAnLaNFAyDP~N~~~Lrql~vidlFld~L~~~n~~l~efaiggLcNl------clD 93 (128)
.+=|..++..++.+++.+.|.|+-+-|-+|.-.|.-|.++.++ ++ .+.++.+.-||+--|-|. .++
T Consensus 23 ~~~l~~~l~~l~~~~~~~~r~~A~~~L~~~~~~p~~~~~~~~l------L~--~~~~~~vr~~aa~~L~~~i~~~w~~l~ 94 (963)
T 2x19_B 23 VENVEKALHQLYYDPNIENKNLAQKWLMQAQVSPQAWHFSWQL------LQ--PDKVPEIQYFGASALHIKISRYWSDIP 94 (963)
T ss_dssp HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHSTTHHHHHHHH------TS--TTSCHHHHHHHHHHHHHHHHHCGGGSC
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHhcCHHHHHHHHHH------hc--CCCchHHHHHHHHHHHHHHHhCHHhCC
Confidence 3446667777445667889999999999999999888876553 11 244666666777666665 356
Q ss_pred hhhHHHHHh
Q 033071 94 PANAAIITK 102 (128)
Q Consensus 94 p~n~~~I~~ 102 (128)
++.++.|.+
T Consensus 95 ~~~~~~ir~ 103 (963)
T 2x19_B 95 TDQYESLKA 103 (963)
T ss_dssp GGGHHHHHH
T ss_pred HHHHHHHHH
Confidence 666666654
No 78
>3b2a_A TON_1937, putative uncharacterized protein; heat-repeats, hypothetical, unknown function; 2.20A {Thermococcus onnurineus}
Probab=52.87 E-value=7.8 Score=31.77 Aligned_cols=58 Identities=16% Similarity=0.056 Sum_probs=42.5
Q ss_pred cchhHHHHhhcCCcHHHHHHHhhhhhhccc---ChhhHHHHHhcCChhhHHhhhcCCChhhhhhcc
Q 033071 63 NVLELFLDCITEPNEKLVEFGVGGICNASV---DPANAAIITKSGGIPLIIECLSSPVRNTVNQRF 125 (128)
Q Consensus 63 ~vidlFld~L~~~n~~l~efaiggLcNlcl---Dp~n~~~I~~~ggi~~i~~~LsS~~e~tVl~a~ 125 (128)
+|++....++.+.|..++.-|+..+-|.+- ||..-+-|++ -|..+|++.++..+--|+
T Consensus 150 ~V~~~l~sLl~Skd~~vK~agl~~L~eia~~S~D~~i~~~I~~-----eI~elL~~eD~~l~e~aL 210 (265)
T 3b2a_A 150 LVRTYINELVVSPDLYTKVAGFCLFLNMLNSSADSGHLTLILD-----EIPSLLQNDNEFIVELAL 210 (265)
T ss_dssp HHHHHHHHHHTCSSHHHHHHHHHHHHHHGGGCSSCCCGGGTTT-----THHHHHTCSCHHHHHHHH
T ss_pred HHHHHHHHHHhCCChhHHHHHHHHHHHhhcccCCHHHHHHHHH-----HHHHHHcCCCHHHHHHHH
Confidence 466777778878888888888888888754 7777776664 356678888887765554
No 79
>3o2t_A Symplekin; heat repeat, scaffold, protein binding; 1.40A {Homo sapiens} PDB: 3odr_A 3ods_A 4h3k_A* 3o2s_A 3o2q_A* 4h3h_A*
Probab=52.58 E-value=56 Score=27.44 Aligned_cols=61 Identities=15% Similarity=0.069 Sum_probs=40.9
Q ss_pred cchhHHHHhhcCCcHHHHHHHhhhhhhcccChhhHHHHHhcCChh---------------hHHhhhcCCChhhhhhcc
Q 033071 63 NVLELFLDCITEPNEKLVEFGVGGICNASVDPANAAIITKSGGIP---------------LIIECLSSPVRNTVNQRF 125 (128)
Q Consensus 63 ~vidlFld~L~~~n~~l~efaiggLcNlclDp~n~~~I~~~ggi~---------------~i~~~LsS~~e~tVl~a~ 125 (128)
.+++....+|.++++.++..+|-+.+|+- |..=++|..+++++ .|.+.+.+.|+.+-+.||
T Consensus 100 ~~l~~L~~LL~d~d~~V~K~~I~~~tslY--pl~f~~i~~~~~~~~~~e~~W~~m~~lK~~Il~~~ds~n~GVrl~ai 175 (386)
T 3o2t_A 100 KLIANLNMLLRDENVNVVKKAILTMTQLY--KVALQWMVKSRVISELQEACWDMVSAMAGDIILLLDSDNDGIRTHAI 175 (386)
T ss_dssp HHHHHHHHHHTCSSHHHHHHHHHHHHHHH--HHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHGGGCSSHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHH--HHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHhccCCcchHHHHH
Confidence 56677777788889999999998887753 55556666655532 345556666666655543
No 80
>1qgr_A Protein (importin beta subunit); transport receptor, nuclear import, heat motif, NLS-binding; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qgk_A 2p8q_A 2q5d_A 3lww_A 1ukl_A 2qna_A
Probab=44.94 E-value=75 Score=26.67 Aligned_cols=59 Identities=7% Similarity=0.133 Sum_probs=45.2
Q ss_pred cCChHHHHHHHHHHhhhhccCCC-c--HHHHHhhcchhHHHHhhcCCcHHHHHHHhhhhhhccc
Q 033071 32 NSTDEERKEKIVANLANFAYDPY-N--YTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNASV 92 (128)
Q Consensus 32 ~t~~~eakeqvlAnLaNFAyDP~-N--~~~Lrql~vidlFld~L~~~n~~l~efaiggLcNlcl 92 (128)
..++...|+.++..|.+++.... . .+++. ++++.++..|.++++.+...|+-+|.++|-
T Consensus 376 ~~~~~~~r~~a~~~l~~i~~~~~~~~~~~~~~--~~l~~l~~~l~d~~~~vr~~a~~~l~~~~~ 437 (876)
T 1qgr_A 376 KNPDWRYRDAAVMAFGCILEGPEPSQLKPLVI--QAMPTLIELMKDPSVVVRDTAAWTVGRICE 437 (876)
T ss_dssp TCSSHHHHHHHHHHHHHTSSSSCHHHHHHHHH--HHHHHHHHHHTCSSHHHHHHHHHHHHHHHH
T ss_pred cCCChHHHHHHHHHHHHHHcCCCHHHHHHHHH--HHHHHHHHHhCCCCHHHHHHHHHHHHHHHH
Confidence 35667889999999999987643 1 13443 478999999999999998888877777763
No 81
>3tjz_B Coatomer subunit gamma; protein trafficking, golgi membrane, protein transport-prote binding complex; HET: GNP; 2.90A {Bos taurus}
Probab=43.73 E-value=30 Score=28.45 Aligned_cols=26 Identities=12% Similarity=0.206 Sum_probs=14.4
Q ss_pred hHHHHhhcCCcHHHHHHHhhhhhhcc
Q 033071 66 ELFLDCITEPNEKLVEFGVGGICNAS 91 (128)
Q Consensus 66 dlFld~L~~~n~~l~efaiggLcNlc 91 (128)
.-|..=++++||-+.-.|+-.||+++
T Consensus 107 Nsl~kDl~~~N~~iR~lALRtL~~I~ 132 (355)
T 3tjz_B 107 SSLTKDMTGKEDSYRGPAVRALCQIT 132 (355)
T ss_dssp HHHHHHHHSSCHHHHHHHHHHHHHHC
T ss_pred HHHHhhcCCCcHhHHHHHHHHHhcCC
Confidence 33444445556666666666666654
No 82
>1wa5_C Importin alpha RE-exporter; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1z3h_A
Probab=37.92 E-value=86 Score=27.71 Aligned_cols=66 Identities=6% Similarity=0.097 Sum_probs=49.9
Q ss_pred HHHHHHhhcC--ChHHHHHHHHHHhhhhccCCCcHHHHHhhcchhHHHHhhcCCcHHHHHHHhhhhhhccc
Q 033071 24 QELVSQFQNS--TDEERKEKIVANLANFAYDPYNYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNASV 92 (128)
Q Consensus 24 q~LV~Efq~t--~~~eakeqvlAnLaNFAyDP~N~~~Lrql~vidlFld~L~~~n~~l~efaiggLcNlcl 92 (128)
+.++.++++. .+.-.|..+.--|+-|+-+ .+-+++. .+++.++..|.+++..+...|+.+|.++|-
T Consensus 458 ~~v~p~l~~~~~~~p~vr~~a~~~lg~~~~~-~~~~~l~--~~l~~l~~~L~d~~~~V~~~A~~Al~~~~~ 525 (960)
T 1wa5_C 458 KEIAPDLTSNNIPHIILRVDAIKYIYTFRNQ-LTKAQLI--ELMPILATFLQTDEYVVYTYAAITIEKILT 525 (960)
T ss_dssp HHTHHHHHCSSCSCHHHHHHHHHHHHHTGGG-SCHHHHH--HHHHHHHHHTTCSCHHHHHHHHHHHHHHTT
T ss_pred HHhHHHhcCCCCCCceehHHHHHHHHHHHhh-CCHHHHH--HHHHHHHHHhCCCChhHHHHHHHHHHHHHh
Confidence 3467777665 2667788888888888765 2334443 468889999999999999999999999874
No 83
>4e17_B Catenin alpha-1; four helix bundle, cell adhesion; 2.30A {Mus musculus}
Probab=37.11 E-value=17 Score=21.90 Aligned_cols=13 Identities=38% Similarity=0.562 Sum_probs=11.2
Q ss_pred HHHHHHHHHHhhc
Q 033071 20 LQYLQELVSQFQN 32 (128)
Q Consensus 20 ~eyLq~LV~Efq~ 32 (128)
++.||.|++||..
T Consensus 25 rqALQdLlseY~~ 37 (40)
T 4e17_B 25 RQALQDLLSEYMG 37 (40)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhc
Confidence 5789999999964
No 84
>2qk1_A Protein STU2; STU2P, XMAP215, DIS1, TOG, CH-TOG, heat repeat, microtubule plus END, +TIP, protein binding; 1.70A {Saccharomyces cerevisiae}
Probab=36.91 E-value=96 Score=23.22 Aligned_cols=69 Identities=9% Similarity=0.194 Sum_probs=48.8
Q ss_pred HHHHHHHHhhcCChHHHHHHHHHHhhhhccCCCc--HHHHHhh--cchhHHHHhhcCCcHHHHHHHhhhhhhcc
Q 033071 22 YLQELVSQFQNSTDEERKEKIVANLANFAYDPYN--YTFLRQL--NVLELFLDCITEPNEKLVEFGVGGICNAS 91 (128)
Q Consensus 22 yLq~LV~Efq~t~~~eakeqvlAnLaNFAyDP~N--~~~Lrql--~vidlFld~L~~~n~~l~efaiggLcNlc 91 (128)
.+..|..-+ ++++...|++++.-|+.++..-.- -.+...+ .+++.+..++.++++.+.+-|+-+|.-+|
T Consensus 147 ll~~l~~~l-~~k~~~vk~~al~~l~~~~~~~~~~~~~l~~~l~~~iip~l~~~l~D~~~~VR~aA~~~l~~i~ 219 (249)
T 2qk1_A 147 MLKDILEHM-KHKTPQIRMECTQLFNASMKEEKDGYSTLQRYLKDEVVPIVIQIVNDTQPAIRTIGFESFAILI 219 (249)
T ss_dssp HHHHHHHHT-TCSSHHHHHHHHHHHHHHHHHCCSCSHHHHHHHTTTHHHHHHHHHTCSSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH-cCCChHHHHHHHHHHHHHHHHcCCcchhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHH
Confidence 344455444 566789999999888888865322 2333455 78999999999999999988876665554
No 85
>3l9t_A Putative uncharacterized protein SMU.31; hypothetical protein, unknown function; HET: EPE; 2.21A {Streptococcus mutans}
Probab=33.60 E-value=1.8e+02 Score=23.08 Aligned_cols=56 Identities=14% Similarity=0.032 Sum_probs=34.5
Q ss_pred chhHHHHhhcCCcHHHHHHHhhhhhhcc--c-ChhhHHHHHhcCChhhHHhhhcCCChhhhhhcc
Q 033071 64 VLELFLDCITEPNEKLVEFGVGGICNAS--V-DPANAAIITKSGGIPLIIECLSSPVRNTVNQRF 125 (128)
Q Consensus 64 vidlFld~L~~~n~~l~efaiggLcNlc--l-Dp~n~~~I~~~ggi~~i~~~LsS~~e~tVl~a~ 125 (128)
+++.+..-+.++|+.+..+|+.|+---| . .+.+.+. +-+++.-|....+.-|..||
T Consensus 140 ~l~~~~~W~~d~n~~VRR~Ase~~rpW~~~~~~k~dp~~------ll~iL~~L~~D~s~yVrKSV 198 (240)
T 3l9t_A 140 ALPIIDEWLKSSNLHTRRAATEGLRIWTNRPYFKENPNE------AIRRIADLKEDVSEYVRKSV 198 (240)
T ss_dssp THHHHHHHHHCSSHHHHHHHHHHTCSGGGSTTTTTCHHH------HHHHHHTTTTCSCHHHHHHH
T ss_pred HHHHHHHHhcCCCHHHHHHHHHhhHHHhccchhhcCHHH------HHHHHHHhcCChHHHHHHHH
Confidence 5778888899999999999999973211 1 1122222 22344445666666666554
No 86
>3mq1_A Mite allergen DER P 5; DUST mite; HET: MRD MPD; 2.80A {Dermatophagoides pteronyssinus}
Probab=33.31 E-value=39 Score=24.07 Aligned_cols=26 Identities=46% Similarity=0.696 Sum_probs=22.5
Q ss_pred hHHHHHHHHHHhhcCChHHHHHHHHH
Q 033071 19 RLQYLQELVSQFQNSTDEERKEKIVA 44 (128)
Q Consensus 19 R~eyLq~LV~Efq~t~~~eakeqvlA 44 (128)
.+=+|++=|+++-.|++.+-|+||+.
T Consensus 19 ~Ll~Ls~Qi~~LEktKsKe~K~~Ilr 44 (103)
T 3mq1_A 19 ALFYLQEQINHFEEKPTKEMKDKIVA 44 (103)
T ss_dssp HHHHHHHHHHHHHHSCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCcHHHHHHHHH
Confidence 35578999999999999999999864
No 87
>3s4w_B Protein FACD2, fanconi anemia group D2 protein homolog; DNA repair, DNA binding protein; 3.41A {Mus musculus}
Probab=30.45 E-value=28 Score=33.96 Aligned_cols=38 Identities=16% Similarity=0.101 Sum_probs=30.3
Q ss_pred chhHHHHhhcCCcHHHHHHHhhhhhhcccChhhHHHHHh
Q 033071 64 VLELFLDCITEPNEKLVEFGVGGICNASVDPANAAIITK 102 (128)
Q Consensus 64 vidlFld~L~~~n~~l~efaiggLcNlclDp~n~~~I~~ 102 (128)
|.+-+.++|.+ |+.+.--.+.+|+||++|++-.+.|++
T Consensus 193 v~~~L~~lL~~-~~~L~~~iLdaLs~L~Ls~~~l~~vr~ 230 (1323)
T 3s4w_B 193 VGKELGELLVQ-NTSLTVPILDVFSSLRLDPNFLSKIRQ 230 (1323)
T ss_dssp HHHHHHHHHHH-CSTTHHHHHHHHHHSCCCHHHHHHHHH
T ss_pred HHHHHHHHHhc-CcchHHHHHHHHHcCCCCHHHHHHHHH
Confidence 44557777776 445778889999999999999988885
No 88
>3uj4_A Inositol 1,4,5-trisphosphate receptor type 1; APO-state, suppressor domain, binding core domain, signaling protein; 3.00A {Rattus norvegicus} PDB: 3uj0_A 3t8s_A*
Probab=29.75 E-value=1e+02 Score=27.25 Aligned_cols=65 Identities=18% Similarity=0.313 Sum_probs=39.6
Q ss_pred HHHHHHHhhhhccCCCcH-----------------HHHHhhcchhHHHHhhcCCcHH----------------------H
Q 033071 39 KEKIVANLANFAYDPYNY-----------------TFLRQLNVLELFLDCITEPNEK----------------------L 79 (128)
Q Consensus 39 keqvlAnLaNFAyDP~N~-----------------~~Lrql~vidlFld~L~~~n~~----------------------l 79 (128)
-.++|.+|-.|-.|-.|. .-||+.++|++.+.+|..+=+. +
T Consensus 473 ~~~~L~dl~~F~~~~~n~~~~~l~~~~g~pnr~RQKLlREQ~il~~l~~iL~~~f~~~~~~~~~~l~~l~~~~~~~~~~i 552 (604)
T 3uj4_A 473 VTKLLEDLVYFVTGGTNSGQDVLEVVFSKPNRERQKLMREQNILKQIFKLLQAPFTDAGDGPMLRLEELGDQRHAPFRHI 552 (604)
T ss_dssp HHHHHHHHHHHCC---------------CCCHHHHHHHHHTTHHHHHHHHTC--------------------------CH
T ss_pred HHHHHHHHHHHHhCcCcCccchhhcccCCcCHHHHHHHHhhhHHHHHHHHHhcccCCcCccchhhHHhhhcccchHHHHH
Confidence 367899999998886552 2489999999999999765221 2
Q ss_pred HHHHhhhhhhcccC-hhhHHHHHhc
Q 033071 80 VEFGVGGICNASVD-PANAAIITKS 103 (128)
Q Consensus 80 ~efaiggLcNlclD-p~n~~~I~~~ 103 (128)
...+---|.-.|-| ..|+++|.+.
T Consensus 553 ~~l~Y~~L~~~~~~~rkNQeyiak~ 577 (604)
T 3uj4_A 553 ARLAYRVLRHSQQDYRKNQEYIAKQ 577 (604)
T ss_dssp HHHHHHHHHHTTTTCHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHhHHhHHHHHHH
Confidence 22233334445666 7788887764
No 89
>2f31_A Diaphanous protein homolog 1; formin,MDIA1, protein-protein complex, armadillo repeats, structural protein; 2.10A {Mus musculus}
Probab=28.58 E-value=1.8e+02 Score=21.66 Aligned_cols=72 Identities=13% Similarity=0.127 Sum_probs=44.4
Q ss_pred cCCCcHHHHHhhcchhHHHHhhcCC-----------cHHHHHHHhhhhhhcccChhhHHHHHh-cCChhhHHhhhcCCCh
Q 033071 51 YDPYNYTFLRQLNVLELFLDCITEP-----------NEKLVEFGVGGICNASVDPANAAIITK-SGGIPLIIECLSSPVR 118 (128)
Q Consensus 51 yDP~N~~~Lrql~vidlFld~L~~~-----------n~~l~efaiggLcNlclDp~n~~~I~~-~ggi~~i~~~LsS~~e 118 (128)
-.|..|-.=...+.++..++.|..- +...+.-.+.+|--++-.+...+.|+. .++|..|..+|.|++.
T Consensus 31 t~~~~Wv~~F~~~Gl~~L~~~L~~~~~~~~~~~~~~~~~~~~~~l~CLkalmn~~~G~~~vl~~~~~i~~l~~~L~s~~~ 110 (233)
T 2f31_A 31 NNPVSWVQTFGAEGLASLLDILKRLHDEKEETSGNYDSRNQHEIIRCLKAFMNNKFGIKTMLETEEGILLLVRAMDPAVP 110 (233)
T ss_dssp HSCHHHHHHHHHHHHHHHHHHHHHHHTCC-----CCHHHHHHHHHHHHHHHTSSHHHHHHHHTSSSHHHHHHTTCCTTSH
T ss_pred cCCcHHHHHHHHhHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHhCChHHHHHHHcCcHHHHHHHHHhCCCCc
Confidence 3455555444456777777777521 233344445555555556666777775 4568888888888888
Q ss_pred hhhh
Q 033071 119 NTVN 122 (128)
Q Consensus 119 ~tVl 122 (128)
.|..
T Consensus 111 ~~r~ 114 (233)
T 2f31_A 111 NMMI 114 (233)
T ss_dssp HHHH
T ss_pred hHHH
Confidence 7653
No 90
>4e18_B Catenin alpha-1; four helix bundle, cell adhesion; 2.40A {Mus musculus}
Probab=27.20 E-value=32 Score=22.28 Aligned_cols=14 Identities=36% Similarity=0.544 Sum_probs=11.6
Q ss_pred HHHHHHHHHHhhcC
Q 033071 20 LQYLQELVSQFQNS 33 (128)
Q Consensus 20 ~eyLq~LV~Efq~t 33 (128)
++.||.|++||...
T Consensus 44 rqALQdLlsEY~~~ 57 (59)
T 4e18_B 44 RQALQDLLSEYMGN 57 (59)
T ss_dssp HHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHhcc
Confidence 57899999999653
No 91
>2jmh_A BLO T 5, mite allergen BLO T 5; DUST mites, group 5; NMR {Blomia tropicalis} PDB: 2jrk_A
Probab=26.39 E-value=48 Score=24.17 Aligned_cols=26 Identities=31% Similarity=0.561 Sum_probs=22.4
Q ss_pred hHHHHHHHHHHhhcCChHHHHHHHHH
Q 033071 19 RLQYLQELVSQFQNSTDEERKEKIVA 44 (128)
Q Consensus 19 R~eyLq~LV~Efq~t~~~eakeqvlA 44 (128)
.+=+|++=|+++-.|++.+-|+||+.
T Consensus 34 ~Ll~Ls~Qi~~LE~tKsKe~K~~Ilr 59 (119)
T 2jmh_A 34 QLLYLQHQLDELNENKSKELQEKIIR 59 (119)
T ss_dssp HHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCcHHHHHHHHH
Confidence 34578899999999999999999864
No 92
>2cpg_A REPA protein, transcriptional repressor COPG; DNA-binding protein, plasmid, gene regulation; 1.60A {Streptococcus agalactiae} SCOP: a.43.1.3 PDB: 1b01_A* 1ea4_A*
Probab=25.07 E-value=32 Score=19.07 Aligned_cols=27 Identities=7% Similarity=0.224 Sum_probs=20.5
Q ss_pred HHHHHhhCCCCCChHHHHHHHHHHhhc
Q 033071 6 QRQEERTGRSGTPRLQYLQELVSQFQN 32 (128)
Q Consensus 6 ~~l~~Rtg~~g~~R~eyLq~LV~Efq~ 32 (128)
++|++...+.|..|-+++...+.+|-.
T Consensus 15 ~~Ld~~a~~~g~srS~~ir~ai~~~l~ 41 (45)
T 2cpg_A 15 ENLEKMAREMGLSKSAMISVALENYKK 41 (45)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCcCHHHHHHHHHHHHHH
Confidence 456666666678999999999998853
No 93
>2lm9_A BLO T 21 allergen; DUST mite; NMR {Blomia tropicalis}
Probab=25.02 E-value=33 Score=24.22 Aligned_cols=26 Identities=12% Similarity=0.303 Sum_probs=22.8
Q ss_pred hHHHHHHHHHHhhcCChHHHHHHHHH
Q 033071 19 RLQYLQELVSQFQNSTDEERKEKIVA 44 (128)
Q Consensus 19 R~eyLq~LV~Efq~t~~~eakeqvlA 44 (128)
.+=+|++=|+++-.|++.+-|+||+.
T Consensus 13 ~Ll~Ls~Qi~~LEktksK~~K~~Ilr 38 (96)
T 2lm9_A 13 FLLHITHEVDDLEKTGNKDEKARLLR 38 (96)
T ss_dssp HHHHHHHHHHHHHHHCCSSHHHHHHH
T ss_pred HHHHHHHHHHHHHccCcHHHHHHHHH
Confidence 45689999999999999999999864
No 94
>2iw3_A Elongation factor 3A; acetylation, ATP-binding, protein biosynthesis, nucleotide-binding, phosphorylation, RNA- binding, rRNA-binding; HET: ADP; 2.4A {Saccharomyces cerevisiae} PDB: 2iwh_A* 2ix3_A 2ix8_A
Probab=24.13 E-value=1.1e+02 Score=28.73 Aligned_cols=95 Identities=14% Similarity=0.263 Sum_probs=66.2
Q ss_pred HHHHHHHHHHhhcCChHHHHHHHHHHhhhhccCCCcHHHHHhh-cchhHHHHhhcCCcHHHHHHHhhhhhhcccChhhHH
Q 033071 20 LQYLQELVSQFQNSTDEERKEKIVANLANFAYDPYNYTFLRQL-NVLELFLDCITEPNEKLVEFGVGGICNASVDPANAA 98 (128)
Q Consensus 20 ~eyLq~LV~Efq~t~~~eakeqvlAnLaNFAyDP~N~~~Lrql-~vidlFld~L~~~n~~l~efaiggLcNlclDp~n~~ 98 (128)
..-|..|++-.+.+..=-.|.-.+.-+..++-+- ....-+.+ .+|+.+-++..+-.+.+...|...+-.+|-==.|++
T Consensus 132 ~~~~~~~~~~~~~~~kw~~k~~~l~~~~~~~~~~-~~~~~~~~~~~~p~~~~~~~d~k~~v~~~~~~~~~~~~~~~~n~d 210 (986)
T 2iw3_A 132 KALLPHLTNAIVETNKWQEKIAILAAFSAMVDAA-KDQVALRMPELIPVLSETMWDTKKEVKAAATAAMTKATETVDNKD 210 (986)
T ss_dssp HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHGGGCCCTT
T ss_pred HHHHHHHHHHhccccchHHHHHHHHHHHHHHHHh-HHHHHHhccchhcchHhhcccCcHHHHHHHHHHHHHHHhcCCCcc
Confidence 3457778887866666667777777777776553 23333344 899999999999999999988877766663233333
Q ss_pred HHHhcCChhhHHhhhcCCCh
Q 033071 99 IITKSGGIPLIIECLSSPVR 118 (128)
Q Consensus 99 ~I~~~ggi~~i~~~LsS~~e 118 (128)
|. .-||.|+.|+..|.+
T Consensus 211 -~~--~~~~~~~~~~~~p~~ 227 (986)
T 2iw3_A 211 -IE--RFIPSLIQCIADPTE 227 (986)
T ss_dssp -TG--GGHHHHHHHHHCTTH
T ss_pred -hh--hhHHHHHHHhcChhh
Confidence 22 248999999998854
No 95
>3eg5_B Protein diaphanous homolog 1; protein-protein complex, RHO proteins, formins, armadillo repeat, G-protein, GTPase, alternative splicing; HET: GNP; 2.70A {Mus musculus} SCOP: a.118.1.23 PDB: 1z2c_B*
Probab=23.87 E-value=2e+02 Score=23.49 Aligned_cols=73 Identities=12% Similarity=0.114 Sum_probs=46.1
Q ss_pred ccCCCcHHHHHhhcchhHHHHhhcC-----------CcHHHHHHHhhhhhhcccChhhHHHHHh-cCChhhHHhhhcCCC
Q 033071 50 AYDPYNYTFLRQLNVLELFLDCITE-----------PNEKLVEFGVGGICNASVDPANAAIITK-SGGIPLIIECLSSPV 117 (128)
Q Consensus 50 AyDP~N~~~Lrql~vidlFld~L~~-----------~n~~l~efaiggLcNlclDp~n~~~I~~-~ggi~~i~~~LsS~~ 117 (128)
.-.|..|-.=.-.+-++.+++.|.. .......-.+.+|--+.-.+...+.|+. ..+|..|..||.|++
T Consensus 96 rt~~~sWV~~F~~~Gl~~Ll~iL~~~~~~~~~~~~~~d~~~q~~~l~CLkalmN~~~G~~~vl~~~~~i~~l~~~L~s~~ 175 (383)
T 3eg5_B 96 TSHPVSWVQTFGAEGLASLLDILKRLHDEKEETSGNYDSRNQHEIIRCLKAFMNNKFGIKTMLETEEGILLLVRAMDPAV 175 (383)
T ss_dssp HHSCHHHHHHHHHHHHHHHHHHHHHHHTCC-------CHHHHHHHHHHHHHHTSSHHHHHHHHTCSSHHHHHHHTCCTTS
T ss_pred hhCccHHHHHHHHccHHHHHHHHHHHhhccccccchhhHHHHHHHHHHHHHHhcchhhHHHHHcChHHHHHHHHHhCCCc
Confidence 4457777433336678888888852 1224444445555555555667777775 556788889998888
Q ss_pred hhhhh
Q 033071 118 RNTVN 122 (128)
Q Consensus 118 e~tVl 122 (128)
..|+.
T Consensus 176 ~~~~~ 180 (383)
T 3eg5_B 176 PNMMI 180 (383)
T ss_dssp HHHHH
T ss_pred hHHHH
Confidence 76654
No 96
>1ho8_A Vacuolar ATP synthase subunit H; heat repeat, hydrolase; 2.95A {Saccharomyces cerevisiae} SCOP: a.118.1.9
Probab=23.43 E-value=37 Score=29.62 Aligned_cols=66 Identities=18% Similarity=0.387 Sum_probs=46.3
Q ss_pred CcHHHHHhhcchhHHHHhhcC----------CcHHHHHHHhhhhhhcc-cChhhHHHHHhcCChhhHHhhhcCCChhhhh
Q 033071 54 YNYTFLRQLNVLELFLDCITE----------PNEKLVEFGVGGICNAS-VDPANAAIITKSGGIPLIIECLSSPVRNTVN 122 (128)
Q Consensus 54 ~N~~~Lrql~vidlFld~L~~----------~n~~l~efaiggLcNlc-lDp~n~~~I~~~ggi~~i~~~LsS~~e~tVl 122 (128)
.||.-+|. ++++|.+ .++..+.-|.-=|--++ .-|..|..+-+-||=..|.++++.+++++--
T Consensus 392 ~~~~llk~------L~~iL~~~~~~~~~~~s~d~~~laVAc~Digefvr~~P~gr~i~~~lg~K~~VM~Lm~h~d~~Vr~ 465 (480)
T 1ho8_A 392 DNYKIFRQ------LIELLQAKVRNGDVNAKQEKIIIQVALNDITHVVELLPESIDVLDKTGGKADIMELLNHSDSRVKY 465 (480)
T ss_dssp GGGHHHHH------HHHHHHHHHHTTCCCSHHHHHHHHHHHHHHHHHHHHCTTHHHHHHHHSHHHHHHHHTSCSSHHHHH
T ss_pred cchHHHHH------HHHHHhhhccccccccCCCcceEEeecccHHHHHHHCcchhHHHHHcCcHHHHHHHhcCCCHHHHH
Confidence 56666654 4566652 35555555543333333 5699999888999988999999999999977
Q ss_pred hcc
Q 033071 123 QRF 125 (128)
Q Consensus 123 ~a~ 125 (128)
.|+
T Consensus 466 ~AL 468 (480)
T 1ho8_A 466 EAL 468 (480)
T ss_dssp HHH
T ss_pred HHH
Confidence 775
No 97
>2kua_A BCL-2-like protein 10; BOO, DIVA, apoptosis, BH3-only, membrane, mitochondri nucleus, transmembrane; NMR {Mus musculus}
Probab=21.88 E-value=2.4e+02 Score=20.71 Aligned_cols=113 Identities=16% Similarity=0.106 Sum_probs=61.6
Q ss_pred HHHHHhhCCCCC-------ChHHHHHHHHHHhhcC----------ChHHHHHHHHHHhhh--hccC-CCcHHHHHhhcch
Q 033071 6 QRQEERTGRSGT-------PRLQYLQELVSQFQNS----------TDEERKEKIVANLAN--FAYD-PYNYTFLRQLNVL 65 (128)
Q Consensus 6 ~~l~~Rtg~~g~-------~R~eyLq~LV~Efq~t----------~~~eakeqvlAnLaN--FAyD-P~N~~~Lrql~vi 65 (128)
.++.-|.+++|. ...+.|+.+.+|++.- +...+.+ ++...|. |.-| .+||..+-.|=+.
T Consensus 23 dYi~y~l~~~g~~~~~~~s~~~~~Lr~v~~ele~~~~~~f~~~~~~~~~a~~-~f~~Va~elF~ddg~iNWGRIVaLfaF 101 (170)
T 2kua_A 23 DYIFFCAREPDTPEPPPTSVEAALLRSVTRQIQQEHQEFFSSFCESRGNRLE-LVKQMADKLLSKDQDFSWSQLVMLLAF 101 (170)
T ss_dssp HHHHHHHCCTTSCCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHTTTSCHHH-HHHHHHHHSCCSSSCCCHHHHHHHHHH
T ss_pred HHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHhhhCCcchHHH-HHHHHHHHHhccCCCCCHHHHHHHHHH
Confidence 456666665555 3478899999998541 1112222 2333333 5554 5788776554222
Q ss_pred hHHHHhh--------------cCCcHHHHHHHhhhhhhcccChhhHHHHHhcCChhhHHhhhcCCChh
Q 033071 66 ELFLDCI--------------TEPNEKLVEFGVGGICNASVDPANAAIITKSGGIPLIIECLSSPVRN 119 (128)
Q Consensus 66 dlFld~L--------------~~~n~~l~efaiggLcNlclDp~n~~~I~~~ggi~~i~~~LsS~~e~ 119 (128)
--.|..= .+..+.++..-+.-++....+...+.-|.++||=.-+++....|..+
T Consensus 102 ~g~La~~~~~~~~~~~~~~~~~~~~~~~v~~I~~~~~~yl~~~~~~~WI~~~GGW~gf~~~f~~~~~~ 169 (170)
T 2kua_A 102 AGTLMNQGPYMAVKQKRDLGNRVIVTRDCCLIVNFLYNLLMGRRHRARLEALGGWDGFCRFFKNPLPL 169 (170)
T ss_dssp HHHHCCCCCSCTTSCCSSCCSCTHHHHHHHHHHHHHHHHHSSHHHHHHHHHTTHHHHHHHHTTCSSSC
T ss_pred HHHHHHhcchhhHHHHhhhcccccchHHHHHHHHHHHHHHhcccHHHHHHHcCCHHHHHHHhcCCCCC
Confidence 2111100 00114455555555555544446777888888888777777776654
No 98
>1f16_A Protein (apoptosis regulator BAX, membrane isoform alpha); helical protein; NMR {Homo sapiens} SCOP: f.1.4.1 PDB: 2k7w_A
Probab=20.89 E-value=2.6e+02 Score=20.78 Aligned_cols=99 Identities=16% Similarity=0.245 Sum_probs=63.7
Q ss_pred HHHHHHHHHHhhcC-------------ChHHHHHHHHHHhhhhccCCCcHHHHHhhcchh--HHHHhhcCCcHHHHHHHh
Q 033071 20 LQYLQELVSQFQNS-------------TDEERKEKIVANLANFAYDPYNYTFLRQLNVLE--LFLDCITEPNEKLVEFGV 84 (128)
Q Consensus 20 ~eyLq~LV~Efq~t-------------~~~eakeqvlAnLaNFAyDP~N~~~Lrql~vid--lFld~L~~~n~~l~efai 84 (128)
.+-|+.+.+|+..- +..+.=.+|...+ |.--.+||..+-.|=+.- |-++++....+.++..-+
T Consensus 60 ~~~Lr~igdele~~~~~~~~~~~l~~~~a~~~F~~Va~el--F~dG~inWGRIValf~F~g~La~~~~~~~~~~~v~~i~ 137 (192)
T 1f16_A 60 SECLKRIGDELDSNMELQRMIAAVDTDSPREVFFRVAADM--FSDGNFNWGRVVALFYFASKLVLKALCTKVPELIRTIM 137 (192)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHTTSCCSCHHHHHHHHHHHH--TSSSSCCSHHHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhHHHHHHHHhcCcccHHHHHHHHHHHH--hcCCCCCHHHHHHHHHHHHHHHHHHHHcCChHHHHHHH
Confidence 45566667776432 2222223555555 443349999877764443 346777777777777777
Q ss_pred hhhhhcccChhhHHHHHhcCChhhHHhhhcCCChhhh
Q 033071 85 GGICNASVDPANAAIITKSGGIPLIIECLSSPVRNTV 121 (128)
Q Consensus 85 ggLcNlclDp~n~~~I~~~ggi~~i~~~LsS~~e~tV 121 (128)
..++...-+ .-..-|.++||=.-+++....+.=.+|
T Consensus 138 ~~~~~yl~~-~~~~WI~~~GGW~gf~~~f~~~~w~~~ 173 (192)
T 1f16_A 138 GWTLDFLRE-RLLGWIQDQGGWDGLLSYFGTPTWQTV 173 (192)
T ss_dssp HHHHHHHHH-TTTHHHHHTCSTHHHHHHCCCSCCHHH
T ss_pred HHHHHHHHh-hHHHHHHHCCCHHHHHHHhCCcchHHH
Confidence 777776533 368889999999999888877654444
No 99
>2gom_A Fibrinogen-binding protein; three-helix closed bundle with LEFT-hand twist, cell adhesio complex; 1.25A {Staphylococcus aureus} SCOP: a.7.17.1 PDB: 2gox_B 3d5s_C 3d5r_C
Probab=20.46 E-value=69 Score=20.64 Aligned_cols=31 Identities=32% Similarity=0.542 Sum_probs=24.4
Q ss_pred HHHHHHHhhcCChH--HHHHHHHHHhhhhccCC
Q 033071 23 LQELVSQFQNSTDE--ERKEKIVANLANFAYDP 53 (128)
Q Consensus 23 Lq~LV~Efq~t~~~--eakeqvlAnLaNFAyDP 53 (128)
-|.+|.||..|... -.|-|-.-||-.|-|.-
T Consensus 10 AQ~~V~~F~~T~TV~~HRKAQ~AVNLi~F~~~~ 42 (61)
T 2gom_A 10 AQNLVREFEKTHTVSAHRKAQKAVNLVSFEYKV 42 (61)
T ss_dssp HHHHHHHHHHHCBHHHHHHHHHHHHHSCGGGHH
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHhhHHhHHHHH
Confidence 37899999987654 56778888999998853
No 100
>3gs3_A Symplekin, LD45768P; helix-turn-helix heat repeat extended loop, transcription, protein binding; 2.40A {Drosophila melanogaster}
Probab=20.38 E-value=2.4e+02 Score=22.02 Aligned_cols=54 Identities=11% Similarity=0.158 Sum_probs=33.4
Q ss_pred hHHHHHHHHHHhhhhccCCCcHHHHHhh-----------------cchhHHHHhhcCCcHHHHHHHhhhhhhc
Q 033071 35 DEERKEKIVANLANFAYDPYNYTFLRQL-----------------NVLELFLDCITEPNEKLVEFGVGGICNA 90 (128)
Q Consensus 35 ~~eakeqvlAnLaNFAyDP~N~~~Lrql-----------------~vidlFld~L~~~n~~l~efaiggLcNl 90 (128)
+.+-=.|++-.+..|+.||. .-+|.+ .+++....+|.++++.++..+|-+.+++
T Consensus 47 dp~ll~~~l~~il~~~~~~~--~~vrk~~~~Fi~e~~~~k~~l~~~~l~~L~~Ll~d~d~~V~K~~I~~~~~i 117 (257)
T 3gs3_A 47 CAELAEEFLESVLSLAHDSN--MEVRKQVVAFVEQVCKVKVELLPHVINVVSMLLRDNSAQVIKRVIQACGSI 117 (257)
T ss_dssp TGGGHHHHHHHHHGGGGCSC--HHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHTTCSCHHHHHHHHHHHHHH
T ss_pred CHhHHHHHHHHHHHhccCCh--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHH
Confidence 33455666777777777742 333332 4555566667777888888888776664
Done!