Query         033071
Match_columns 128
No_of_seqs    70 out of 72
Neff          4.0 
Searched_HMMs 13730
Date          Mon Mar 25 15:26:53 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033071.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/033071hhsearch_scop -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 d1xm9a1 a.118.1.24 (A:244-700)  99.4 2.6E-13 1.9E-17   99.3   9.2   96   23-119     4-101 (457)
  2 d1jdha_ a.118.1.1 (A:) beta-Ca  99.2 9.4E-12 6.9E-16   98.4   8.8   90   35-124   432-521 (529)
  3 d1jdha_ a.118.1.1 (A:) beta-Ca  99.2 1.7E-11 1.2E-15   96.9   7.5  104   21-124    59-163 (529)
  4 d1xqra1 a.118.1.21 (A:87-350)   99.1 4.8E-11 3.5E-15   88.9   7.6  105   21-125   101-207 (264)
  5 d1xqra1 a.118.1.21 (A:87-350)   99.1 1.2E-10 8.5E-15   86.8   7.0  106   20-125    57-165 (264)
  6 d1q1sc_ a.118.1.1 (C:) Importi  99.0 4.5E-10 3.2E-14   84.9   8.5  102   19-120    54-157 (434)
  7 d1wa5b_ a.118.1.1 (B:) Karyoph  99.0   4E-10 2.9E-14   88.6   7.6  104   21-124   119-224 (503)
  8 d1xm9a1 a.118.1.24 (A:244-700)  99.0 4.7E-10 3.4E-14   81.7   7.0   97   22-120   332-435 (457)
  9 d1q1sc_ a.118.1.1 (C:) Importi  99.0 9.4E-10 6.9E-14   83.1   8.9  104   21-125    13-120 (434)
 10 d1wa5b_ a.118.1.1 (B:) Karyoph  98.5 1.9E-07 1.4E-11   73.1   8.3  102   22-124   289-392 (503)
 11 d1te4a_ a.118.1.16 (A:) MTH187  96.0  0.0043 3.1E-07   39.6   4.6   83   23-126    24-106 (111)
 12 d1te4a_ a.118.1.16 (A:) MTH187  92.9   0.029 2.1E-06   35.4   2.6   52   64-125    23-74  (111)
 13 d1oyza_ a.118.1.16 (A:) Hypoth  90.4    0.64 4.7E-05   31.4   7.7   51   32-92     29-79  (276)
 14 d1b3ua_ a.118.1.2 (A:) Constan  87.1    0.63 4.6E-05   35.5   6.2   97   21-119   241-339 (588)
 15 d1b3ua_ a.118.1.2 (A:) Constan  85.7     1.9 0.00014   32.7   8.3   89   20-119    48-141 (588)
 16 d1oyza_ a.118.1.16 (A:) Hypoth  84.1     3.5 0.00026   27.5   8.4   66   23-93     52-117 (276)
 17 d2vgla_ a.118.1.10 (A:) Adapti  82.5       4 0.00029   32.2   9.4   87   30-124   329-416 (584)
 18 d2vglb_ a.118.1.10 (B:) Adapti  80.0    0.39 2.8E-05   38.5   2.3   58   33-93    129-187 (579)
 19 d2bpta1 a.118.1.1 (A:1-861) Im  79.8     1.6 0.00011   33.5   5.7   92   23-118   599-694 (861)
 20 d1ibrb_ a.118.1.1 (B:) Importi  79.7     2.5 0.00019   29.7   6.5   70   20-91    363-435 (458)
 21 d2vglb_ a.118.1.10 (B:) Adapti  77.8     3.3 0.00024   32.8   7.3   79   36-125   329-408 (579)
 22 d2bpta1 a.118.1.1 (A:1-861) Im  72.5     3.4 0.00025   31.6   5.8  105   20-124   133-244 (861)
 23 d1ibrb_ a.118.1.1 (B:) Importi  62.1     2.6 0.00019   29.7   2.9   57   64-122   366-425 (458)
 24 d1qbkb_ a.118.1.1 (B:) Karyoph  55.9      20  0.0014   28.7   7.7  100   18-121   391-495 (888)
 25 d1ho8a_ a.118.1.9 (A:) Regulat  55.4      25  0.0018   28.6   8.3   78   37-115   240-326 (477)
 26 d1qgra_ a.118.1.1 (A:) Importi  54.8      13 0.00094   28.4   6.1  102   22-125   173-280 (876)
 27 d1qbkb_ a.118.1.1 (B:) Karyoph  50.5     3.7 0.00027   33.2   2.3   90   18-118     5-102 (888)
 28 d1n4ka1 a.118.22.1 (A:436-602)  48.9     9.5 0.00069   27.0   4.2   56   57-114    73-151 (167)
 29 d2pzza1 d.77.1.2 (A:2-134) Hyp  44.4     4.1  0.0003   27.6   1.4   63   57-127    55-124 (133)
 30 d2vgla_ a.118.1.10 (A:) Adapti  43.5      14   0.001   28.9   4.8   62   24-91    363-424 (584)
 31 d1u6gc_ a.118.1.2 (C:) Cullin-  43.1      54  0.0039   26.4   8.5   62   63-126   962-1025(1207)
 32 d1wa5c_ a.118.1.1 (C:) Exporti  39.0      33  0.0024   26.8   6.4   37   23-59      4-40  (959)
 33 d1w36b1 c.37.1.19 (B:1-485) Ex  37.9     2.3 0.00017   31.4  -0.8   20   26-47    382-401 (485)
 34 d1g7da_ a.71.1.1 (A:) Endoplas  34.8      12 0.00089   24.3   2.6   28   18-45      2-29  (106)
 35 d1dvpa1 a.118.9.2 (A:1-145) Hr  33.9      20  0.0014   23.8   3.7   34   18-51     82-115 (145)
 36 d2g0ua1 a.2.20.1 (A:1-84) BsaL  32.1      32  0.0023   22.0   4.3   45   19-64     14-58  (84)
 37 d1uptb_ a.193.1.1 (B:) Golgi a  31.5      30  0.0022   20.8   3.8   35   18-52      3-37  (58)
 38 d1qgra_ a.118.1.1 (A:) Importi  28.6      98  0.0072   23.2   7.3   71   20-91    364-436 (876)
 39 d2nojb1 a.7.17.1 (B:52-109) Un  27.2      20  0.0015   21.4   2.5   30   23-52      7-38  (58)
 40 d1u6gc_ a.118.1.2 (C:) Cullin-  26.6      36  0.0026   27.5   4.6   66   25-92    134-201 (1207)
 41 d2i9ca1 a.118.1.25 (A:3-123) H  24.2      57  0.0041   21.8   4.7   43   58-102    48-92  (121)
 42 d1y14a_ a.60.8.2 (A:) RNA poly  23.5      30  0.0022   24.7   3.3   59   32-101    89-150 (176)
 43 d1yira2 d.41.2.2 (A:4-144) Nic  20.8      22  0.0016   24.0   2.0   36   39-74     55-91  (141)
 44 d1ujka_ a.118.9.2 (A:) ADP-rib  20.5      37  0.0027   22.6   3.1   34   18-51     85-123 (145)
 45 d2goma1 a.7.17.1 (A:105-165) F  20.5      32  0.0024   20.6   2.4   31   23-53     10-42  (61)

No 1  
>d1xm9a1 a.118.1.24 (A:244-700) Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.43  E-value=2.6e-13  Score=99.30  Aligned_cols=96  Identities=17%  Similarity=0.209  Sum_probs=87.5

Q ss_pred             HHHHHHHhhcCChHHHHHHHHHHhhhhcc-CCCcHHHHHhhcchhHHHHhhcCCcHHHHHHHhhhhhhccc-ChhhHHHH
Q 033071           23 LQELVSQFQNSTDEERKEKIVANLANFAY-DPYNYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNASV-DPANAAII  100 (128)
Q Consensus        23 Lq~LV~Efq~t~~~eakeqvlAnLaNFAy-DP~N~~~Lrql~vidlFld~L~~~n~~l~efaiggLcNlcl-Dp~n~~~I  100 (128)
                      ++.||.-. .+++.+.|+.++.-|.|.++ |+.|+..+++.|+|+.++.+|+++++.+++.|+++|+||+. +++++..|
T Consensus         4 ip~lv~~L-~~~~~~~~~~a~~~l~~l~~~~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~a~~aL~~L~~~~~~~~~~i   82 (457)
T d1xm9a1           4 IPKAVQYL-SSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET   82 (457)
T ss_dssp             HHHHHHHH-HSSCTHHHHHHHHHHHHHTSSCSSHHHHHHHTTHHHHHHHHTTSSCHHHHHHHHHHHHHHHSSCHHHHHHH
T ss_pred             HHHHHHHh-CCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCcHHHHHHHHCCCCHHHHHHHHHHHHHHHcCCHHHHHHH
Confidence            56778766 78889999999999999987 69999999999999999999999999999999999999995 59999999


Q ss_pred             HhcCChhhHHhhhcCCChh
Q 033071          101 TKSGGIPLIIECLSSPVRN  119 (128)
Q Consensus       101 ~~~ggi~~i~~~LsS~~e~  119 (128)
                      .+.|||+.++.++++....
T Consensus        83 ~~~g~v~~li~~l~~~~~~  101 (457)
T d1xm9a1          83 RRQNGIREAVSLLRRTGNA  101 (457)
T ss_dssp             HHTTCHHHHHHHHTTCCCH
T ss_pred             HHCCChHHHHHHHhccCcH
Confidence            9999999999998765543


No 2  
>d1jdha_ a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.25  E-value=9.4e-12  Score=98.39  Aligned_cols=90  Identities=26%  Similarity=0.317  Sum_probs=85.1

Q ss_pred             hHHHHHHHHHHhhhhccCCCcHHHHHhhcchhHHHHhhcCCcHHHHHHHhhhhhhcccChhhHHHHHhcCChhhHHhhhc
Q 033071           35 DEERKEKIVANLANFAYDPYNYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNASVDPANAAIITKSGGIPLIIECLS  114 (128)
Q Consensus        35 ~~eakeqvlAnLaNFAyDP~N~~~Lrql~vidlFld~L~~~n~~l~efaiggLcNlclDp~n~~~I~~~ggi~~i~~~Ls  114 (128)
                      .++..+.+.+.|.++|.||.|+..+++.+++++|+++|.++++.+++.|++.||||+.|+++++.|.+.||++.++++++
T Consensus       432 ~~~~~~~~~~al~~la~~~~~r~~~~~~~~i~~Lv~lL~~~~~~v~~~a~~aL~~L~~~~~~~~~i~~~g~~~~L~~Ll~  511 (529)
T d1jdha_         432 MEEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCELAQDKEAAEAIEAEGATAPLTELLH  511 (529)
T ss_dssp             HHHHHHHHHHHHHHHTTSHHHHHHHHHTTCHHHHHHGGGCSCHHHHHHHHHHHHHHTTSHHHHHHHHHTTCHHHHHHGGG
T ss_pred             hHHHHHHHHHHHHHHccCHHHHHHHHHCCCHHHHHHHhCCCCHHHHHHHHHHHHHHhcChhhHHHHHHCCCHHHHHHHhC
Confidence            45778888999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCChhhhhhc
Q 033071          115 SPVRNTVNQR  124 (128)
Q Consensus       115 S~~e~tVl~a  124 (128)
                      |+++++...|
T Consensus       512 s~n~~v~~~a  521 (529)
T d1jdha_         512 SRNEGVATYA  521 (529)
T ss_dssp             CSSHHHHHHH
T ss_pred             CCCHHHHHHH
Confidence            9999887655


No 3  
>d1jdha_ a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.19  E-value=1.7e-11  Score=96.92  Aligned_cols=104  Identities=13%  Similarity=0.205  Sum_probs=94.9

Q ss_pred             HHHHHHHHHhhcCChHHHHHHHHHHhhhhccCCCcHHHHHhhcchhHHHHhhcCCcHHHHHHHhhhhhhcccChh-hHHH
Q 033071           21 QYLQELVSQFQNSTDEERKEKIVANLANFAYDPYNYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNASVDPA-NAAI   99 (128)
Q Consensus        21 eyLq~LV~Efq~t~~~eakeqvlAnLaNFAyDP~N~~~Lrql~vidlFld~L~~~n~~l~efaiggLcNlclDp~-n~~~   99 (128)
                      +.+..|+.-.+.+++.+.++.++.-|++++-|+.+...+.+.|+++.++.+|.++++.+++.|+++|+|+|.|.+ .++.
T Consensus        59 ~~v~~l~~~L~~~~~~~~~~~a~~~L~~l~~~~~~~~~i~~~g~i~~Li~lL~~~~~~v~~~a~~aL~~l~~~~~~~~~~  138 (529)
T d1jdha_          59 QMVSAIVRTMQNTNDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMA  138 (529)
T ss_dssp             HHHHHHHHHHHHCCCHHHHHHHHHHHHHHTTSHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHCTTHHHH
T ss_pred             hHHHHHHHHHcCCCCHHHHHHHHHHHHHHhCCchhHHHHHHCCCHHHHHHHhCCCCHHHHHHHHHHHHHhhcccchhhhH
Confidence            467888888888899999999999999999999999999999999999999999999999999999999998854 6677


Q ss_pred             HHhcCChhhHHhhhcCCChhhhhhc
Q 033071          100 ITKSGGIPLIIECLSSPVRNTVNQR  124 (128)
Q Consensus       100 I~~~ggi~~i~~~LsS~~e~tVl~a  124 (128)
                      +.+.|||+.++.+|+++++++...|
T Consensus       139 ~~~~g~i~~Lv~lL~~~~~~~~~~a  163 (529)
T d1jdha_         139 VRLAGGLQKMVALLNKTNVKFLAIT  163 (529)
T ss_dssp             HHHHTHHHHHHHGGGCCCHHHHHHH
T ss_pred             HHhcCCchHHHHHHHccChHHHHHH
Confidence            7899999999999999998766544


No 4  
>d1xqra1 a.118.1.21 (A:87-350) Hsp70-binding protein 1 (HspBP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.14  E-value=4.8e-11  Score=88.90  Aligned_cols=105  Identities=9%  Similarity=0.103  Sum_probs=95.9

Q ss_pred             HHHHHHHHHhhcCChHHHHHHHHHHhhhhccC-CCcHHHHHhhcchhHHHHhhcCCcHHHHHHHhhhhhhcc-cChhhHH
Q 033071           21 QYLQELVSQFQNSTDEERKEKIVANLANFAYD-PYNYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNAS-VDPANAA   98 (128)
Q Consensus        21 eyLq~LV~Efq~t~~~eakeqvlAnLaNFAyD-P~N~~~Lrql~vidlFld~L~~~n~~l~efaiggLcNlc-lDp~n~~   98 (128)
                      +.++.||.-+...++.+.++.++..|+|++++ |.|...+.+.++++.++..|.++++.+++.|+..|+|+| -+|.+++
T Consensus       101 ~~i~~Lv~lL~~~~~~~v~~~a~~aL~~l~~~~~~~~~~~~~~~gi~~L~~lL~~~~~~~~~~a~~~L~~l~~~~~~~~~  180 (264)
T d1xqra1         101 GALRKLLRLLDRDACDTVRVKALFAISCLVREQEAGLLQFLRLDGFSVLMRAMQQQVQKLKVKSAFLLQNLLVGHPEHKG  180 (264)
T ss_dssp             THHHHHHHHHHHCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHH
T ss_pred             CchHHHHHHhhcCCCHHHHHHHHHHHHHHhccchhhHHHHHHhhhhhHHHHHHhcCchHHHHHHHHHHHHHHhccHHHHH
Confidence            46889999887778889999999999999965 788889999999999999999999999999999999997 5799999


Q ss_pred             HHHhcCChhhHHhhhcCCChhhhhhcc
Q 033071           99 IITKSGGIPLIIECLSSPVRNTVNQRF  125 (128)
Q Consensus        99 ~I~~~ggi~~i~~~LsS~~e~tVl~a~  125 (128)
                      .+.+.|+++.++.+|+++++++..+|+
T Consensus       181 ~~~~~~~v~~L~~lL~~~~~~~~~~a~  207 (264)
T d1xqra1         181 TLCSMGMVQQLVALVRTEHSPFHEHVL  207 (264)
T ss_dssp             HHHHTTHHHHHHHHHTSCCSTHHHHHH
T ss_pred             HHHHhhhHHHHHHHHcCCCHHHHHHHH
Confidence            999999999999999999998876654


No 5  
>d1xqra1 a.118.1.21 (A:87-350) Hsp70-binding protein 1 (HspBP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.07  E-value=1.2e-10  Score=86.77  Aligned_cols=106  Identities=9%  Similarity=0.083  Sum_probs=95.0

Q ss_pred             HHHHHHHHHHhhcCChHHHHHHHHHHhhhhcc-CCCcHHHHHhhcchhHHHHhhc-CCcHHHHHHHhhhhhhcccC-hhh
Q 033071           20 LQYLQELVSQFQNSTDEERKEKIVANLANFAY-DPYNYTFLRQLNVLELFLDCIT-EPNEKLVEFGVGGICNASVD-PAN   96 (128)
Q Consensus        20 ~eyLq~LV~Efq~t~~~eakeqvlAnLaNFAy-DP~N~~~Lrql~vidlFld~L~-~~n~~l~efaiggLcNlclD-p~n   96 (128)
                      .+.++.||.-+-++++.+.|.+++.-|+|++. +|.+...+.+.++++.++.+|. ++++.+.+.|+++|+|++-+ |.+
T Consensus        57 ~gg~~~ll~~ll~s~~~~vr~~A~~~L~~l~~~~~~~~~~~~~~~~i~~Lv~lL~~~~~~~v~~~a~~aL~~l~~~~~~~  136 (264)
T d1xqra1          57 LSGMHLLVGRYLEAGAAGLRWRAAQLIGTCSQNVAAIQEQVLGLGALRKLLRLLDRDACDTVRVKALFAISCLVREQEAG  136 (264)
T ss_dssp             TTHHHHHHHTTTTCSSHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHHCSCHHHHHHHHHHHHHHHTTCHHH
T ss_pred             cCCHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHhhcCCCHHHHHHHHHHHHHHhccchhh
Confidence            34678899988889999999999999999996 6889999999999999999996 56789999999999999955 888


Q ss_pred             HHHHHhcCChhhHHhhhcCCChhhhhhcc
Q 033071           97 AAIITKSGGIPLIIECLSSPVRNTVNQRF  125 (128)
Q Consensus        97 ~~~I~~~ggi~~i~~~LsS~~e~tVl~a~  125 (128)
                      ++.+.+.||++.++.+|.|+++++...|+
T Consensus       137 ~~~~~~~~gi~~L~~lL~~~~~~~~~~a~  165 (264)
T d1xqra1         137 LLQFLRLDGFSVLMRAMQQQVQKLKVKSA  165 (264)
T ss_dssp             HHHHHHTTHHHHHHHHHHSSCHHHHHHHH
T ss_pred             HHHHHHhhhhhHHHHHHhcCchHHHHHHH
Confidence            99999999999999999999998876553


No 6  
>d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.02  E-value=4.5e-10  Score=84.92  Aligned_cols=102  Identities=19%  Similarity=0.213  Sum_probs=91.3

Q ss_pred             hHHHHHHHHHHhhcCChHHHHHHHHHHhhhhcc-CCCcHHHHHhhcchhHHHHhhcCCcHHHHHHHhhhhhhcccC-hhh
Q 033071           19 RLQYLQELVSQFQNSTDEERKEKIVANLANFAY-DPYNYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNASVD-PAN   96 (128)
Q Consensus        19 R~eyLq~LV~Efq~t~~~eakeqvlAnLaNFAy-DP~N~~~Lrql~vidlFld~L~~~n~~l~efaiggLcNlclD-p~n   96 (128)
                      +.+.+..||.-.+.+++.+.|..++..|+|+|. ++.+...+.+.|+++.|+.+|.++++.+++.|+++|+|+|.| +..
T Consensus        54 ~~g~i~~Lv~lL~~~~~~~v~~~a~~~L~~la~~~~~~~~~i~~~~~i~~l~~~L~~~~~~~~~~a~~~L~nl~~~~~~~  133 (434)
T d1q1sc_          54 RAGLIPKFVSFLGKTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGDGSAF  133 (434)
T ss_dssp             HTTCHHHHHHHTTCGGGHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHH
T ss_pred             HCCCHHHHHHHHccCCCHHHHHHHHHHHHHHhcCChhhhhHhhhccchhhhhhccccCCHHHHHHHHHHHHHHhccchHH
Confidence            345677899988777888999999999999986 478899999999999999999999999999999999999986 788


Q ss_pred             HHHHHhcCChhhHHhhhcCCChhh
Q 033071           97 AAIITKSGGIPLIIECLSSPVRNT  120 (128)
Q Consensus        97 ~~~I~~~ggi~~i~~~LsS~~e~t  120 (128)
                      ++.+.+.|+++.++.+|.+++...
T Consensus       134 ~~~i~~~~~~~~l~~~l~~~~~~~  157 (434)
T d1q1sc_         134 RDLVIKHGAIDPLLALLAVPDLST  157 (434)
T ss_dssp             HHHHHHTTCHHHHHHHTCSSCGGG
T ss_pred             HHHHHHhhhhhHHHHHHHhccccc
Confidence            999999999999999999887653


No 7  
>d1wa5b_ a.118.1.1 (B:) Karyopherin alpha {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.99  E-value=4e-10  Score=88.60  Aligned_cols=104  Identities=13%  Similarity=0.144  Sum_probs=93.3

Q ss_pred             HHHHHHHHHhhcCChHHHHHHHHHHhhhhccC-CCcHHHHHhhcchhHHHHhhcCCcHHHHHHHhhhhhhcccC-hhhHH
Q 033071           21 QYLQELVSQFQNSTDEERKEKIVANLANFAYD-PYNYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNASVD-PANAA   98 (128)
Q Consensus        21 eyLq~LV~Efq~t~~~eakeqvlAnLaNFAyD-P~N~~~Lrql~vidlFld~L~~~n~~l~efaiggLcNlclD-p~n~~   98 (128)
                      +.+..||.-.+.+.+.+.+..++.-|+|.+++ +.....+.+.|++++++..|.++++.+++.|+++|+|+|-| +++++
T Consensus       119 g~i~~Lv~~l~~~~~~~iq~~a~~~L~ni~~~~~~~~~~~~~~g~i~~l~~lL~s~~~~i~~~a~~~L~nia~~~~~~r~  198 (503)
T d1wa5b_         119 GVVPRLVEFMRENQPEMLQLEAAWALTNIASGTSAQTKVVVDADAVPLFIQLLYTGSVEVKEQAIWALGNVAGDSTDYRD  198 (503)
T ss_dssp             TCHHHHHHTTSTTSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHHHHHCCHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred             CChHHHHHHHcCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHhCCChHHHHHHhcCCChhHHHHHHHHHHHHhhhhHHHHH
Confidence            45778999888888889999999999999985 56677888899999999999999999999999999999876 89999


Q ss_pred             HHHhcCChhhHHhhhcCCChhhhhhc
Q 033071           99 IITKSGGIPLIIECLSSPVRNTVNQR  124 (128)
Q Consensus        99 ~I~~~ggi~~i~~~LsS~~e~tVl~a  124 (128)
                      .+++.|+++.++.++++++.+++.++
T Consensus       199 ~l~~~~~~~~L~~ll~~~~~~~~~~~  224 (503)
T d1wa5b_         199 YVLQCNAMEPILGLFNSNKPSLIRTA  224 (503)
T ss_dssp             HHHHTTCHHHHHHGGGSCCHHHHHHH
T ss_pred             HHHhhcccccchhhcccCCHHHHHHH
Confidence            99999999999999999998876554


No 8  
>d1xm9a1 a.118.1.24 (A:244-700) Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.98  E-value=4.7e-10  Score=81.71  Aligned_cols=97  Identities=15%  Similarity=0.119  Sum_probs=82.8

Q ss_pred             HHHHHHHHhhcCChHHHHHHHHHHhhhhccCCCcHHHHHhhcchhHHHHhhcC------CcHHHHHHHhhhhhhccc-Ch
Q 033071           22 YLQELVSQFQNSTDEERKEKIVANLANFAYDPYNYTFLRQLNVLELFLDCITE------PNEKLVEFGVGGICNASV-DP   94 (128)
Q Consensus        22 yLq~LV~Efq~t~~~eakeqvlAnLaNFAyDP~N~~~Lrql~vidlFld~L~~------~n~~l~efaiggLcNlcl-Dp   94 (128)
                      .++.||.-+ .+++.+.++.++.-|.|++-||.|+..+.+ ++++.++..|..      .++.+++.|++.|+|++. +|
T Consensus       332 ~l~~L~~~l-~~~~~~v~~~a~~~l~~La~~~~~~~~i~~-~~i~~li~~L~~~~~~~~~~~~v~~~a~~~L~~l~~~~~  409 (457)
T d1xm9a1         332 GLPQIARLL-QSGNSDVVRSGASLLSNMSRHPLLHRVMGN-QVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQP  409 (457)
T ss_dssp             CHHHHHHHT-TCSCHHHHHHHHHHHHHHHTSGGGHHHHHH-HTHHHHHHTTTSCCSCSTTHHHHHHHHHHHHHHHHTTCT
T ss_pred             ChHHHHhhh-cCccHHHHHHHHHHHHHHhhChhHHHHHHH-hhHHHHHHHHhccccCcCCcHHHHHHHHHHHHHHhcCCH
Confidence            367788776 677889999999999999999999998876 677888888853      357899999999999985 59


Q ss_pred             hhHHHHHhcCChhhHHhhhcCCChhh
Q 033071           95 ANAAIITKSGGIPLIIECLSSPVRNT  120 (128)
Q Consensus        95 ~n~~~I~~~ggi~~i~~~LsS~~e~t  120 (128)
                      ++++.+++.|||+.+++++.+++++-
T Consensus       410 ~~~~~l~~~g~i~~L~~l~~~~~~~~  435 (457)
T d1xm9a1         410 QLAKQYFSSSMLNNIINLCRSSASPK  435 (457)
T ss_dssp             HHHHHHCCHHHHHHHHHHHHCTTCHH
T ss_pred             HHHHHHHHCCCHHHHHHHHhCCCCHH
Confidence            99999999999999999998775543


No 9  
>d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.98  E-value=9.4e-10  Score=83.10  Aligned_cols=104  Identities=13%  Similarity=0.182  Sum_probs=89.8

Q ss_pred             HHHHHHHHHhhcCChHHHHHHHHHHhhhhccCCCc--HHHHHhhcchhHHHHhhcC-CcHHHHHHHhhhhhhccc-Chhh
Q 033071           21 QYLQELVSQFQNSTDEERKEKIVANLANFAYDPYN--YTFLRQLNVLELFLDCITE-PNEKLVEFGVGGICNASV-DPAN   96 (128)
Q Consensus        21 eyLq~LV~Efq~t~~~eakeqvlAnLaNFAyDP~N--~~~Lrql~vidlFld~L~~-~n~~l~efaiggLcNlcl-Dp~n   96 (128)
                      ..++.||.-. .+++.|.+.+++..|+++..+..|  ...+.+.|+++.++.+|.. +++.++..|++.|+|+|- ++..
T Consensus        13 ~~i~~lv~~l-~s~~~~~~~~a~~~l~~l~s~~~~~~~~~i~~~g~i~~Lv~lL~~~~~~~v~~~a~~~L~~la~~~~~~   91 (434)
T d1q1sc_          13 WSVEDIVKGI-NSNNLESQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGKTDCSPIQFESAWALTNIASGTSEQ   91 (434)
T ss_dssp             CCHHHHHHHH-TSSCHHHHHHHHHHHHHHHHSSSCCCHHHHHHTTCHHHHHHHTTCGGGHHHHHHHHHHHHHHHTSCHHH
T ss_pred             hhHHHHHHHH-cCCCHHHHHHHHHHHHHHhcCCCCchHHHHHHCCCHHHHHHHHccCCCHHHHHHHHHHHHHHhcCChhh
Confidence            3588899877 788999999999999998766666  3678899999999999965 567899999999999975 5889


Q ss_pred             HHHHHhcCChhhHHhhhcCCChhhhhhcc
Q 033071           97 AAIITKSGGIPLIIECLSSPVRNTVNQRF  125 (128)
Q Consensus        97 ~~~I~~~ggi~~i~~~LsS~~e~tVl~a~  125 (128)
                      +..+++.|+++.++.+|++++.+..-.|+
T Consensus        92 ~~~i~~~~~i~~l~~~L~~~~~~~~~~a~  120 (434)
T d1q1sc_          92 TKAVVDGGAIPAFISLLASPHAHISEQAV  120 (434)
T ss_dssp             HHHHHHTTHHHHHHHHTTCSCHHHHHHHH
T ss_pred             hhHhhhccchhhhhhccccCCHHHHHHHH
Confidence            99999999999999999999988876553


No 10 
>d1wa5b_ a.118.1.1 (B:) Karyopherin alpha {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.49  E-value=1.9e-07  Score=73.05  Aligned_cols=102  Identities=13%  Similarity=0.143  Sum_probs=87.9

Q ss_pred             HHHHHHHHhhcCChHHHHHHHHHHhhhhccCCC-cHHHHHhhcchhHHHHhhcCCcHHHHHHHhhhhhhccc-ChhhHHH
Q 033071           22 YLQELVSQFQNSTDEERKEKIVANLANFAYDPY-NYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNASV-DPANAAI   99 (128)
Q Consensus        22 yLq~LV~Efq~t~~~eakeqvlAnLaNFAyDP~-N~~~Lrql~vidlFld~L~~~n~~l~efaiggLcNlcl-Dp~n~~~   99 (128)
                      .++.||.-. .+++.+.+..++..|+|++.+.. ....+.+.++++.+..+|.++++.+++.++..|+|++. +|.....
T Consensus       289 ~~~~l~~ll-~~~~~~v~~~al~~l~nl~~~~~~~~~~~~~~~~l~~l~~ll~~~~~~i~~~~~~~l~nl~~~~~~~~~~  367 (503)
T d1wa5b_         289 IPKRLVELL-SHESTLVQTPALRAVGNIVTGNDLQTQVVINAGVLPALRLLLSSPKENIKKEACWTISNITAGNTEQIQA  367 (503)
T ss_dssp             CHHHHHHGG-GCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHH
T ss_pred             hhhhhhhcc-cCCchhhhhhHHHHHHHHHHHHHHHHHhhhccchHHHHHHHhcCCCHHHHHHHHHHHHHHhhccHHHHHH
Confidence            455677655 67788999999999999998744 45577788999999999999999999999999999976 7888999


Q ss_pred             HHhcCChhhHHhhhcCCChhhhhhc
Q 033071          100 ITKSGGIPLIIECLSSPVRNTVNQR  124 (128)
Q Consensus       100 I~~~ggi~~i~~~LsS~~e~tVl~a  124 (128)
                      +++.|+++.++.+|++++.++...|
T Consensus       368 i~~~~~l~~li~~l~~~~~~v~~~a  392 (503)
T d1wa5b_         368 VIDANLIPPLVKLLEVAEYKTKKEA  392 (503)
T ss_dssp             HHHTTCHHHHHHHHHHSCHHHHHHH
T ss_pred             HHHccccchhHHhcccCChhHHHHH
Confidence            9999999999999999998876554


No 11 
>d1te4a_ a.118.1.16 (A:) MTH187 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=96.01  E-value=0.0043  Score=39.57  Aligned_cols=83  Identities=6%  Similarity=-0.006  Sum_probs=65.3

Q ss_pred             HHHHHHHhhcCChHHHHHHHHHHhhhhccCCCcHHHHHhhcchhHHHHhhcCCcHHHHHHHhhhhhhcccChhhHHHHHh
Q 033071           23 LQELVSQFQNSTDEERKEKIVANLANFAYDPYNYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNASVDPANAAIITK  102 (128)
Q Consensus        23 Lq~LV~Efq~t~~~eakeqvlAnLaNFAyDP~N~~~Lrql~vidlFld~L~~~n~~l~efaiggLcNlclDp~n~~~I~~  102 (128)
                      +..|+..+. .++...|..++..|+++..          -++++.++.+|.++++.+...|+-+|..+. |+        
T Consensus        24 ~~~L~~~l~-d~~~~vR~~a~~~L~~~~~----------~~~~~~L~~~l~d~~~~VR~~a~~aL~~i~-~~--------   83 (111)
T d1te4a_          24 FEPLLESLS-NEDWRIRGAAAWIIGNFQD----------ERAVEPLIKLLEDDSGFVRSGAARSLEQIG-GE--------   83 (111)
T ss_dssp             HHHHHHGGG-CSCHHHHHHHHHHHGGGCS----------HHHHHHHHHHHHHCCTHHHHHHHHHHHHHC-SH--------
T ss_pred             HHHHHHHHc-CCCHHHHHHHHHHHHhcch----------hhhHHHHHhhhccchhHHHHHHHHHHHHhC-cc--------
Confidence            456776664 5667899999999998753          257899999999999999999999998764 22        


Q ss_pred             cCChhhHHhhhcCCChhhhhhccc
Q 033071          103 SGGIPLIIECLSSPVRNTVNQRFL  126 (128)
Q Consensus       103 ~ggi~~i~~~LsS~~e~tVl~a~t  126 (128)
                       +.++.|..+|..+++++...|+.
T Consensus        84 -~~~~~L~~ll~d~~~~vr~~A~~  106 (111)
T d1te4a_          84 -RVRAAMEKLAETGTGFARKVAVN  106 (111)
T ss_dssp             -HHHHHHHHHTTSCCTHHHHHHHH
T ss_pred             -chHHHHHHHHcCCCHHHHHHHHH
Confidence             34778888999999988777653


No 12 
>d1te4a_ a.118.1.16 (A:) MTH187 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=92.92  E-value=0.029  Score=35.45  Aligned_cols=52  Identities=12%  Similarity=0.052  Sum_probs=42.4

Q ss_pred             chhHHHHhhcCCcHHHHHHHhhhhhhcccChhhHHHHHhcCChhhHHhhhcCCChhhhhhcc
Q 033071           64 VLELFLDCITEPNEKLVEFGVGGICNASVDPANAAIITKSGGIPLIIECLSSPVRNTVNQRF  125 (128)
Q Consensus        64 vidlFld~L~~~n~~l~efaiggLcNlclDp~n~~~I~~~ggi~~i~~~LsS~~e~tVl~a~  125 (128)
                      +++.++..|.++++.+...|+.+|.+++- +         +.++.++.+|+++++.+...|+
T Consensus        23 ~~~~L~~~l~d~~~~vR~~a~~~L~~~~~-~---------~~~~~L~~~l~d~~~~VR~~a~   74 (111)
T d1te4a_          23 AFEPLLESLSNEDWRIRGAAAWIIGNFQD-E---------RAVEPLIKLLEDDSGFVRSGAA   74 (111)
T ss_dssp             THHHHHHGGGCSCHHHHHHHHHHHGGGCS-H---------HHHHHHHHHHHHCCTHHHHHHH
T ss_pred             HHHHHHHHHcCCCHHHHHHHHHHHHhcch-h---------hhHHHHHhhhccchhHHHHHHH
Confidence            57788999999999999999999988752 2         2478899999999988766554


No 13 
>d1oyza_ a.118.1.16 (A:) Hypothetical protein YibA {Escherichia coli [TaxId: 562]}
Probab=90.44  E-value=0.64  Score=31.39  Aligned_cols=51  Identities=8%  Similarity=0.039  Sum_probs=31.9

Q ss_pred             cCChHHHHHHHHHHhhhhccCCCcHHHHHhhcchhHHHHhhcCCcHHHHHHHhhhhhhccc
Q 033071           32 NSTDEERKEKIVANLANFAYDPYNYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNASV   92 (128)
Q Consensus        32 ~t~~~eakeqvlAnLaNFAyDP~N~~~Lrql~vidlFld~L~~~n~~l~efaiggLcNlcl   92 (128)
                      +.++...|...+..|..+.-          -.++++++.+|.++++.+...|+-+|..+..
T Consensus        29 ~d~~~~vR~~A~~~L~~~~~----------~~~~~~l~~~l~d~~~~vr~~a~~aL~~l~~   79 (276)
T d1oyza_          29 DDHNSLKRISSARVLQLRGG----------QDAVRLAIEFCSDKNYIRRDIGAFILGQIKI   79 (276)
T ss_dssp             TCSSHHHHHHHHHHHHHHCC----------HHHHHHHHHHHTCSSHHHHHHHHHHHHHSCC
T ss_pred             cCCCHHHHHHHHHHHHhhCC----------HhHHHHHHHHHcCCCHHHHHHHHHHHHHhcc
Confidence            45666666666666665531          1356666777777777777777666666653


No 14 
>d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=87.14  E-value=0.63  Score=35.50  Aligned_cols=97  Identities=7%  Similarity=0.042  Sum_probs=57.3

Q ss_pred             HHHHHHHHHhhcCChHHHHHHHHHHhhhhccCCCcHHHHHhhcchhHHHHhhcCCcHHHHHHHhhhhhhccc--ChhhHH
Q 033071           21 QYLQELVSQFQNSTDEERKEKIVANLANFAYDPYNYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNASV--DPANAA   98 (128)
Q Consensus        21 eyLq~LV~Efq~t~~~eakeqvlAnLaNFAyDP~N~~~Lrql~vidlFld~L~~~n~~l~efaiggLcNlcl--Dp~n~~   98 (128)
                      +++-.++..+-..++...|+.+...|.+++..-..  ....-.+++.|...+.++++.+...|+..|..+|-  .+..+.
T Consensus       241 ~~i~~~l~~~~~D~~~~Vr~~~~~~l~~l~~~~~~--~~~~~~l~~~l~~ll~d~~~~vr~~a~~~l~~~~~~l~~~~~~  318 (588)
T d1b3ua_         241 ALVMPTLRQAAEDKSWRVRYMVADKFTELQKAVGP--EITKTDLVPAFQNLMKDCEAEVRAAASHKVKEFCENLSADCRE  318 (588)
T ss_dssp             HHTHHHHHHHHTCSSHHHHHHHHHTHHHHHHHHCH--HHHHHTHHHHHHHHHTCSSHHHHHHHHHHHHHHHHTSCTTTHH
T ss_pred             HHHHHHHHHhcccccHHHHHHHHHhHHHHHHHhhh--hhhhhhhhHHHHHHHhccchHHHHHHHHHHHHHHHHHhhhhhh
Confidence            34444444444455667777777777777542111  11223678999999999999888888877777652  233222


Q ss_pred             HHHhcCChhhHHhhhcCCChh
Q 033071           99 IITKSGGIPLIIECLSSPVRN  119 (128)
Q Consensus        99 ~I~~~ggi~~i~~~LsS~~e~  119 (128)
                      ...-..-+|.+...++++++.
T Consensus       319 ~~~~~~i~~~l~~~~~d~~~~  339 (588)
T d1b3ua_         319 NVIMSQILPCIKELVSDANQH  339 (588)
T ss_dssp             HHHHHTHHHHHHHHHTCSCHH
T ss_pred             hhhHHHHHHHHHHhhcCCChH
Confidence            222122355566666665554


No 15 
>d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=85.71  E-value=1.9  Score=32.73  Aligned_cols=89  Identities=15%  Similarity=0.127  Sum_probs=55.4

Q ss_pred             HHHHHHHHHHhhcCChHHHHHHHHHHhhhhcc---CCCcHHHHHhhcchhHHHHhhcCCcHHHHHHHhhhhhhccc--Ch
Q 033071           20 LQYLQELVSQFQNSTDEERKEKIVANLANFAY---DPYNYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNASV--DP   94 (128)
Q Consensus        20 ~eyLq~LV~Efq~t~~~eakeqvlAnLaNFAy---DP~N~~~Lrql~vidlFld~L~~~n~~l~efaiggLcNlcl--Dp   94 (128)
                      -+-+..|.+-.+  +++|.+..+..+|++|..   +|..-     -.+++++..++..++..+.+.|+..|..++-  ++
T Consensus        48 ~~lip~l~~~~~--~~~ev~~~~~~~l~~~~~~~~~~~~~-----~~ll~~l~~l~~~~~~~Vr~~a~~~l~~i~~~~~~  120 (588)
T d1b3ua_          48 SELLPFLTDTIY--DEDEVLLALAEQLGTFTTLVGGPEYV-----HCLLPPLESLATVEETVVRDKAVESLRAISHEHSP  120 (588)
T ss_dssp             HTHHHHHHHTCC--CCHHHHHHHHHHHTTCSGGGTSGGGG-----GGGHHHHHHHTTSSCHHHHHHHHHHHHHHHTTSCH
T ss_pred             HHHHHHHHHHhc--CcHHHHHHHHHHHHHHHHHcCChhHH-----HHHHHHHHHHccCCCHHHHHHHHHHHHHHHHhCCH
Confidence            344444444433  345677777788888864   34322     2446778888888888899999988888864  44


Q ss_pred             hhHHHHHhcCChhhHHhhhcCCChh
Q 033071           95 ANAAIITKSGGIPLIIECLSSPVRN  119 (128)
Q Consensus        95 ~n~~~I~~~ggi~~i~~~LsS~~e~  119 (128)
                      ...+.++    +|.+..+.+++...
T Consensus       121 ~~~~~~l----~p~i~~L~~~~~~~  141 (588)
T d1b3ua_         121 SDLEAHF----VPLVKRLAGGDWFT  141 (588)
T ss_dssp             HHHHHTH----HHHHHHHHTCSSHH
T ss_pred             HHHHHHH----HHHHHHHhcccchH
Confidence            4333333    45555666655443


No 16 
>d1oyza_ a.118.1.16 (A:) Hypothetical protein YibA {Escherichia coli [TaxId: 562]}
Probab=84.06  E-value=3.5  Score=27.46  Aligned_cols=66  Identities=5%  Similarity=-0.088  Sum_probs=41.1

Q ss_pred             HHHHHHHhhcCChHHHHHHHHHHhhhhccCCCcHHHHHhhcchhHHHHhhcCCcHHHHHHHhhhhhhcccC
Q 033071           23 LQELVSQFQNSTDEERKEKIVANLANFAYDPYNYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNASVD   93 (128)
Q Consensus        23 Lq~LV~Efq~t~~~eakeqvlAnLaNFAyDP~N~~~Lrql~vidlFld~L~~~n~~l~efaiggLcNlclD   93 (128)
                      ++.|+.-.+ .++.+.|..++..|..+............    .++--.|+++++.+...|+..|.++|.+
T Consensus        52 ~~~l~~~l~-d~~~~vr~~a~~aL~~l~~~~~~~~~~~~----~l~~~~l~d~~~~vr~~a~~aL~~~~~~  117 (276)
T d1oyza_          52 VRLAIEFCS-DKNYIRRDIGAFILGQIKICKKCEDNVFN----ILNNMALNDKSACVRATAIESTAQRCKK  117 (276)
T ss_dssp             HHHHHHHHT-CSSHHHHHHHHHHHHHSCCCTTTHHHHHH----HHHHHHHHCSCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHc-CCCHHHHHHHHHHHHHhccccccccchHH----HHHHHHhcCCChhHHHHHHHHHHHHccc
Confidence            444554443 45566777777777777655444333211    2344456788999999999998888643


No 17 
>d2vgla_ a.118.1.10 (A:) Adaptin alpha C subunit N-terminal fragment {Mouse (Mus musculus) [TaxId: 10090]}
Probab=82.49  E-value=4  Score=32.22  Aligned_cols=87  Identities=11%  Similarity=0.184  Sum_probs=62.5

Q ss_pred             hhcCChHHHHHHHHHHhhhhccCCCcHHHHHhhcchhHHHHhhc-CCcHHHHHHHhhhhhhcccChhhHHHHHhcCChhh
Q 033071           30 FQNSTDEERKEKIVANLANFAYDPYNYTFLRQLNVLELFLDCIT-EPNEKLVEFGVGGICNASVDPANAAIITKSGGIPL  108 (128)
Q Consensus        30 fq~t~~~eakeqvlAnLaNFAyDP~N~~~Lrql~vidlFld~L~-~~n~~l~efaiggLcNlclDp~n~~~I~~~ggi~~  108 (128)
                      |-.+++.+.|-.++..|.+.+....+..++..  -.+.|+.+|. +++..+...++.-|+++| +++|.+.|++     .
T Consensus       329 lL~s~~~niry~aL~~L~~L~~~~~~~~~~~~--~~~~il~~l~~~~~~~Ir~~aL~lL~~L~-n~~Ni~~Iv~-----e  400 (584)
T d2vgla_         329 FLQHRETNLRYLALESMCTLASSEFSHEAVKT--HIETVINALKTERDVSVRQRAVDLLYAMC-DRSNAQQIVA-----E  400 (584)
T ss_dssp             HSSCSCHHHHHHHHHHHHHHTTCTTTHHHHHT--THHHHHHHHTTCCCHHHHHHHHHHHHHHC-CHHHHHHHHH-----H
T ss_pred             HhcCCCcchHHHHHHHHHHHHccCCCHHHHHH--HHHHHHHhcccCchhHHHHHHHHHHHHhC-CHHHHHHHHH-----H
Confidence            33567778888888888888876666666554  2455676665 667789999999999987 7788888854     4


Q ss_pred             HHhhhcCCChhhhhhc
Q 033071          109 IIECLSSPVRNTVNQR  124 (128)
Q Consensus       109 i~~~LsS~~e~tVl~a  124 (128)
                      +...+++.+.+.+-.+
T Consensus       401 L~~yl~~~d~~~k~~~  416 (584)
T d2vgla_         401 MLSYLETADYSIREEI  416 (584)
T ss_dssp             HHHHHHHCCHHHHHHH
T ss_pred             HHHHHhhCCHHHHHHH
Confidence            6677777777655443


No 18 
>d2vglb_ a.118.1.10 (B:) Adaptin beta subunit N-terminal fragment {Human (Homo sapiens) [TaxId: 9606]}
Probab=79.97  E-value=0.39  Score=38.49  Aligned_cols=58  Identities=16%  Similarity=0.209  Sum_probs=43.3

Q ss_pred             CChHHHHHHHHHHhhhh-ccCCCcHHHHHhhcchhHHHHhhcCCcHHHHHHHhhhhhhcccC
Q 033071           33 STDEERKEKIVANLANF-AYDPYNYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNASVD   93 (128)
Q Consensus        33 t~~~eakeqvlAnLaNF-AyDP~N~~~Lrql~vidlFld~L~~~n~~l~efaiggLcNlclD   93 (128)
                      .++...|+.++-.++.+ ..+|.-   +...+.++.+.++|.++|+.++..|+..|+.++-+
T Consensus       129 D~~p~VRk~Aa~~l~kl~~~~p~~---~~~~~~~~~L~~lL~D~n~~V~~~Al~~L~~I~~~  187 (579)
T d2vglb_         129 DEDPYVRKTAAVCVAKLHDINAQM---VEDQGFLDSLRDLIADSNPMVVANAVAALSEISES  187 (579)
T ss_dssp             CSCHHHHHHHHHHHHHHHHSSCCC---HHHHHHHHHHHHTTSCSCHHHHHHHHHHHHHHTTS
T ss_pred             cCcHHHHHHHHHHHHHHhccChhh---hhhhhHHHHHHHHHcCCChHHHHHHHHHHHHHHHh
Confidence            45556666666666654 345643   44567889999999999999999999999998753


No 19 
>d2bpta1 a.118.1.1 (A:1-861) Importin beta {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=79.84  E-value=1.6  Score=33.52  Aligned_cols=92  Identities=10%  Similarity=0.163  Sum_probs=59.5

Q ss_pred             HHHHHHHhhcCChHHHHHHHHHHhhhhccC-CCc-HHHHHhhcchhHHHHhhcCCcHHHHHHHhhhhhhcc--cChhhHH
Q 033071           23 LQELVSQFQNSTDEERKEKIVANLANFAYD-PYN-YTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNAS--VDPANAA   98 (128)
Q Consensus        23 Lq~LV~Efq~t~~~eakeqvlAnLaNFAyD-P~N-~~~Lrql~vidlFld~L~~~n~~l~efaiggLcNlc--lDp~n~~   98 (128)
                      +..+...+...++...++.++..+++++.- +.+ -+|+.  .+++.++.+|.+.++.+...|++.+..+|  +....+.
T Consensus       599 ~~~l~~~l~~~~~~~v~~~~l~~l~~l~~~~~~~~~~~l~--~i~p~l~~~l~~~~~~v~~~a~~~l~~i~~~~~~~~~~  676 (861)
T d2bpta1         599 MGLFFRLLEKKDSAFIEDDVFYAISALAASLGKGFEKYLE--TFSPYLLKALNQVDSPVSITAVGFIADISNSLEEDFRR  676 (861)
T ss_dssp             HHHHHHHHHSTTGGGTHHHHHHHHHHHHHHHGGGGHHHHH--HHHHHHHHHHHCTTSHHHHHHHHHHHHHHHHTGGGGHH
T ss_pred             HHHHhhhcccCCchhHHHHHHHHHHHHHHHhhHHHHHHHH--HHhhHHHHHhCCCCHHHHHHHHHHHHHHHHHhHHHhHh
Confidence            344455556677777777777666665532 222 23443  57899999999999888888888777664  3344444


Q ss_pred             HHHhcCChhhHHhhhcCCCh
Q 033071           99 IITKSGGIPLIIECLSSPVR  118 (128)
Q Consensus        99 ~I~~~ggi~~i~~~LsS~~e  118 (128)
                      ++-+-  ++.+.++|++++.
T Consensus       677 ~~~~i--~~~L~~~l~~~~~  694 (861)
T d2bpta1         677 YSDAM--MNVLAQMISNPNA  694 (861)
T ss_dssp             HHHHH--HHHHHHHHHCTTC
T ss_pred             hHHHH--HHHHHHHhCCCCC
Confidence            44433  6677888887653


No 20 
>d1ibrb_ a.118.1.1 (B:) Importin beta {Human (Homo sapiens) [TaxId: 9606]}
Probab=79.71  E-value=2.5  Score=29.72  Aligned_cols=70  Identities=6%  Similarity=0.132  Sum_probs=48.6

Q ss_pred             HHHHHHHHHHhhcCChHHHHHHHHHHhhhhccCCCc---HHHHHhhcchhHHHHhhcCCcHHHHHHHhhhhhhcc
Q 033071           20 LQYLQELVSQFQNSTDEERKEKIVANLANFAYDPYN---YTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNAS   91 (128)
Q Consensus        20 ~eyLq~LV~Efq~t~~~eakeqvlAnLaNFAyDP~N---~~~Lrql~vidlFld~L~~~n~~l~efaiggLcNlc   91 (128)
                      .+.+-+.+.+.-.+++...|+..+--|+.++..+.-   .+++.  .+++.++.+|.++++.+...|+-+|-.++
T Consensus       363 ~~~l~~~i~~~l~s~~~~~r~aal~~l~~i~~~~~~~~~~~~l~--~i~~~l~~~l~d~~~~VR~~a~~~l~~i~  435 (458)
T d1ibrb_         363 VPHVLPFIKEHIKNPDWRYRDAAVMAFGCILEGPEPSQLKPLVI--QAMPTLIELMKDPSVVVRDTAAWTVGRIC  435 (458)
T ss_dssp             HHHHHHHHHHHTTCSSHHHHHHHHHHHHHTSSSSCTTTTCTTTT--THHHHHHHGGGCSCHHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHhcCHhHHHHHHH--HHHHHHHHHhCCCCHHHHHHHHHHHHHHH
Confidence            344445555555667778888888888888864321   23443  47899999999999999887776665553


No 21 
>d2vglb_ a.118.1.10 (B:) Adaptin beta subunit N-terminal fragment {Human (Homo sapiens) [TaxId: 9606]}
Probab=77.84  E-value=3.3  Score=32.81  Aligned_cols=79  Identities=16%  Similarity=0.177  Sum_probs=50.2

Q ss_pred             HHHHHHHHHHhhhhccCCCcHHHHHhhcchhHHHHhhcCCcHHHHHHHhhhhhhcccC-hhhHHHHHhcCChhhHHhhhc
Q 033071           36 EERKEKIVANLANFAYDPYNYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNASVD-PANAAIITKSGGIPLIIECLS  114 (128)
Q Consensus        36 ~eakeqvlAnLaNFAyDP~N~~~Lrql~vidlFld~L~~~n~~l~efaiggLcNlclD-p~n~~~I~~~ggi~~i~~~Ls  114 (128)
                      ...|.+.+.-|...+ ++.|...     +++-+.+.+++.+..+++.++-+|++|+.. |...+.+     |+.+.++++
T Consensus       329 ~~ik~~~L~iL~~l~-~~~n~~~-----Il~eL~~y~~~~d~~~~~~ai~aI~~la~~~~~~~~~~-----i~~Ll~ll~  397 (579)
T d2vglb_         329 IYVKLEKLDIMIRLA-SQANIAQ-----VLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERC-----VSTLLDLIQ  397 (579)
T ss_dssp             HHHHHHHHHHHHHTC-CSSTHHH-----HHHHHHHHTTSSCHHHHHHHHHHHHHHHTTCHHHHHHH-----HHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHc-ChhhHHH-----HHHHHHHHhhcCCHHHHHHHHHHHHHHHHhCchHHHHH-----HHHHHHHHh
Confidence            344555454444444 5666543     355566677777788888888888888754 4444444     456778888


Q ss_pred             CCChhhhhhcc
Q 033071          115 SPVRNTVNQRF  125 (128)
Q Consensus       115 S~~e~tVl~a~  125 (128)
                      ++++.++..++
T Consensus       398 ~~~~~v~~e~i  408 (579)
T d2vglb_         398 TKVNYVVQEAI  408 (579)
T ss_dssp             TCCHHHHHHHH
T ss_pred             CCchhHHHHHH
Confidence            88777766554


No 22 
>d2bpta1 a.118.1.1 (A:1-861) Importin beta {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=72.49  E-value=3.4  Score=31.56  Aligned_cols=105  Identities=11%  Similarity=0.108  Sum_probs=61.7

Q ss_pred             HHHHHHHHHHhhcCChHHHHHHHHHHhhhhc--cCCCcHHHHHhh-cchhHHHHhh--cCCcHHHHHHHhhhhhhcccC-
Q 033071           20 LQYLQELVSQFQNSTDEERKEKIVANLANFA--YDPYNYTFLRQL-NVLELFLDCI--TEPNEKLVEFGVGGICNASVD-   93 (128)
Q Consensus        20 ~eyLq~LV~Efq~t~~~eakeqvlAnLaNFA--yDP~N~~~Lrql-~vidlFld~L--~~~n~~l~efaiggLcNlclD-   93 (128)
                      .+.++.|++-.+.+++...++-++.-|..+.  .++..-.++..+ .++.-++..+  .+++..+...|+-++.++... 
T Consensus       133 peli~~L~~~~~s~~~~~~~~~al~~l~~i~e~~~~~~~~~~~~~~~il~~i~~~~~~~~~~~~v~~~a~~~l~~~~~~~  212 (861)
T d2bpta1         133 PELMKIMVDNTGAEQPENVKRASLLALGYMCESADPQSQALVSSSNNILIAIVQGAQSTETSKAVRLAALNALADSLIFI  212 (861)
T ss_dssp             HHHHHHHHHHTSTTSCHHHHHHHHHHHHHHHHTSSTTSSTTGGGHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHGGGC
T ss_pred             HHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHH
Confidence            4678888888877777777776666665553  344433333333 3333344433  345678888888888887532 


Q ss_pred             hhh-HHHHHhcCChhhHHhhhcCCChhhhhhc
Q 033071           94 PAN-AAIITKSGGIPLIIECLSSPVRNTVNQR  124 (128)
Q Consensus        94 p~n-~~~I~~~ggi~~i~~~LsS~~e~tVl~a  124 (128)
                      +.+ ........-++.+..++.++++++...|
T Consensus       213 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  244 (861)
T d2bpta1         213 KNNMEREGERNYLMQVVCEATQAEDIEVQAAA  244 (861)
T ss_dssp             HHHHTSHHHHHHHHHHHHHHHTCSCHHHHHHH
T ss_pred             hHhHHhhhhhhHHHHhHHHHhcCCCHHHHHHH
Confidence            111 1111112235678888898888765544


No 23 
>d1ibrb_ a.118.1.1 (B:) Importin beta {Human (Homo sapiens) [TaxId: 9606]}
Probab=62.13  E-value=2.6  Score=29.68  Aligned_cols=57  Identities=16%  Similarity=0.230  Sum_probs=38.4

Q ss_pred             chhHHHHhhcCCcHHHHHHHhhhhhhcc---cChhhHHHHHhcCChhhHHhhhcCCChhhhh
Q 033071           64 VLELFLDCITEPNEKLVEFGVGGICNAS---VDPANAAIITKSGGIPLIIECLSSPVRNTVN  122 (128)
Q Consensus        64 vidlFld~L~~~n~~l~efaiggLcNlc---lDp~n~~~I~~~ggi~~i~~~LsS~~e~tVl  122 (128)
                      +++.+...|.+++.+..+-|+-+|..++   .+...+.++-  .-++.|+.+|+++++.+--
T Consensus       366 l~~~i~~~l~s~~~~~r~aal~~l~~i~~~~~~~~~~~~l~--~i~~~l~~~l~d~~~~VR~  425 (458)
T d1ibrb_         366 VLPFIKEHIKNPDWRYRDAAVMAFGCILEGPEPSQLKPLVI--QAMPTLIELMKDPSVVVRD  425 (458)
T ss_dssp             HHHHHHHHTTCSSHHHHHHHHHHHHHTSSSSCTTTTCTTTT--THHHHHHHGGGCSCHHHHH
T ss_pred             HHHHHHHHhcCCCHHHHHHHHHHHHHHHHhcCHhHHHHHHH--HHHHHHHHHhCCCCHHHHH
Confidence            4556667778888888877766666554   3333344444  3478899999999886543


No 24 
>d1qbkb_ a.118.1.1 (B:) Karyopherin beta2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=55.91  E-value=20  Score=28.66  Aligned_cols=100  Identities=7%  Similarity=0.066  Sum_probs=66.7

Q ss_pred             ChHHHHHHHHHHhhcCChHHHHHHHHHHhhhhccCCCcHHHHHhh--cchhHHHHhhcCCcHHHHHHHhhhhhhccc---
Q 033071           18 PRLQYLQELVSQFQNSTDEERKEKIVANLANFAYDPYNYTFLRQL--NVLELFLDCITEPNEKLVEFGVGGICNASV---   92 (128)
Q Consensus        18 ~R~eyLq~LV~Efq~t~~~eakeqvlAnLaNFAyDP~N~~~Lrql--~vidlFld~L~~~n~~l~efaiggLcNlcl---   92 (128)
                      .-++.+-.++.+.-.+++-..||-++-.|+-.+..+.  ..+...  ++++.++..|.++++.+..-|+-.|..+|-   
T Consensus       391 ~il~~~l~~l~~~l~s~~~~~reaa~~alg~i~eg~~--~~~~~~l~~li~~l~~~l~d~~~~Vr~~a~~~l~~~~~~~~  468 (888)
T d1qbkb_         391 ELLPHILPLLKELLFHHEWVVKESGILVLGAIAEGCM--QGMIPYLPELIPHLIQCLSDKKALVRSITCWTLSRYAHWVV  468 (888)
T ss_dssp             SSHHHHHHHHHHTTTSSSHHHHHHHHHHHHHHTTTSH--HHHTTTHHHHHHHHHHHTTSSCHHHHHHHHHHHHHTHHHHH
T ss_pred             HHHHHHHHHHHHhhccchhHHHHHHHHHhhhhhhhHH--HHhcccchhhhHHHHHhccCCCHHHHHHHHHHHHHHHHHhh
Confidence            4466777778887778888889888887877665432  222221  578899999999999988877666655542   


Q ss_pred             ChhhHHHHHhcCChhhHHhhhcCCChhhh
Q 033071           93 DPANAAIITKSGGIPLIIECLSSPVRNTV  121 (128)
Q Consensus        93 Dp~n~~~I~~~ggi~~i~~~LsS~~e~tV  121 (128)
                      ......++.  .-++.+...+.++++.+-
T Consensus       469 ~~~~~~~~~--~~l~~ll~~l~d~~~~V~  495 (888)
T d1qbkb_         469 SQPPDTYLK--PLMTELLKRILDSNKRVQ  495 (888)
T ss_dssp             SSCHHHHTT--THHHHHHHHHSSSCHHHH
T ss_pred             hhhhhhhhh--hhHHHHHHHhcCCCHHHH
Confidence            222223332  347778888888776543


No 25 
>d1ho8a_ a.118.1.9 (A:) Regulatory subunit H of the V-type ATPase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=55.40  E-value=25  Score=28.62  Aligned_cols=78  Identities=14%  Similarity=0.157  Sum_probs=57.3

Q ss_pred             HHHHHHHHHhhhhccCCCcHHHHHh--hcchhHHHHhhc-CCcHHHHHHHhhhhhhcccChh------hHHHHHhcCChh
Q 033071           37 ERKEKIVANLANFAYDPYNYTFLRQ--LNVLELFLDCIT-EPNEKLVEFGVGGICNASVDPA------NAAIITKSGGIP  107 (128)
Q Consensus        37 eakeqvlAnLaNFAyDP~N~~~Lrq--l~vidlFld~L~-~~n~~l~efaiggLcNlclDp~------n~~~I~~~ggi~  107 (128)
                      ..+=+++--+|=..|+|.--..+.+  ++++...++++. ++.|++++-+++.|-||+-.+.      ....++.+++++
T Consensus       240 Ql~Y~~ll~lWlLSF~~~~~~~l~~~~~~~i~~l~~i~~~s~KEKvvRv~l~~l~Nll~~~~~~~~~~~~~~~v~~~~l~  319 (477)
T d1ho8a_         240 QLQYHSLLLIWLLTFNPVFANELVQKYLSDFLDLLKLVKITIKEKVSRLCISIILQCCSTRVKQHKKVIKQLLLLGNALP  319 (477)
T ss_dssp             HHHHHHHHHHHHHTTSHHHHHHHHTTSHHHHHHHHHHHHHCCSHHHHHHHHHHHHHTTSSSSTTHHHHHHHHHHHHCHHH
T ss_pred             HHHHHHHHHHHHHHcCHHHHHHHHHhhhHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHHcchhH
Confidence            4466788889999999888888866  467888889885 5799999999999999985422      234455655554


Q ss_pred             hHHhhhcC
Q 033071          108 LIIECLSS  115 (128)
Q Consensus       108 ~i~~~LsS  115 (128)
                      . +..|+.
T Consensus       320 ~-l~~L~~  326 (477)
T d1ho8a_         320 T-VQSLSE  326 (477)
T ss_dssp             H-HHHHHS
T ss_pred             H-HHHHhc
Confidence            4 455554


No 26 
>d1qgra_ a.118.1.1 (A:) Importin beta {Human (Homo sapiens) [TaxId: 9606]}
Probab=54.76  E-value=13  Score=28.38  Aligned_cols=102  Identities=10%  Similarity=0.075  Sum_probs=60.7

Q ss_pred             HHHHHHHHhhcC-ChHHHHHHHHHHhhhhccCCCc---HHHHHhhcchhHHHHhhcCCcHHHHHHHhhhhhhccc-Chh-
Q 033071           22 YLQELVSQFQNS-TDEERKEKIVANLANFAYDPYN---YTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNASV-DPA-   95 (128)
Q Consensus        22 yLq~LV~Efq~t-~~~eakeqvlAnLaNFAyDP~N---~~~Lrql~vidlFld~L~~~n~~l~efaiggLcNlcl-Dp~-   95 (128)
                      .+..++.-+..+ .+.+.|..++..+.++..-...   ....+ --+++.+.+.+..+++.+...+.-.|+.++- -|+ 
T Consensus       173 il~~i~~~l~~~~~~~~v~~~a~~~l~~~~~~~~~~~~~~~~~-~~i~~~l~~~~~~~~~~v~~~~~~~l~~l~~~~~~~  251 (876)
T d1qgra_         173 ILTAIIQGMRKEEPSNNVKLAATNALLNSLEFTKANFDKESER-HFIMQVVCEATQCPDTRVRVAALQNLVKIMSLYYQY  251 (876)
T ss_dssp             HHHHHHHHHSTTCSCHHHHHHHHHHHHHHGGGCHHHHTSHHHH-HHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHcCcCccHHHHHHHHHHHHHHHHHhhhhhhHHHHH-HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHH
Confidence            344445444333 4567788777777766533211   11111 1367778888889999999988888887752 232 


Q ss_pred             hHHHHHhcCChhhHHhhhcCCChhhhhhcc
Q 033071           96 NAAIITKSGGIPLIIECLSSPVRNTVNQRF  125 (128)
Q Consensus        96 n~~~I~~~ggi~~i~~~LsS~~e~tVl~a~  125 (128)
                      ...++.. .-.+.+...+.+.++++...|+
T Consensus       252 ~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~  280 (876)
T d1qgra_         252 METYMGP-ALFAITIEAMKSDIDEVALQGI  280 (876)
T ss_dssp             CHHHHTT-THHHHHHHHHTCSSHHHHHHHH
T ss_pred             HHHHHHH-HHHHHHHHHhccccHHHHHHHH
Confidence            2333322 2234566778888888776654


No 27 
>d1qbkb_ a.118.1.1 (B:) Karyopherin beta2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=50.53  E-value=3.7  Score=33.16  Aligned_cols=90  Identities=13%  Similarity=0.143  Sum_probs=54.6

Q ss_pred             ChHHHHHHHHHHhhcCCh--HHHHHHHHHHhhhhccCCCcHHHHHhhcchhHHHHhhcCCcHHHHHHHhhhhhhc-----
Q 033071           18 PRLQYLQELVSQFQNSTD--EERKEKIVANLANFAYDPYNYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNA-----   90 (128)
Q Consensus        18 ~R~eyLq~LV~Efq~t~~--~eakeqvlAnLaNFAyDP~N~~~Lrql~vidlFld~L~~~n~~l~efaiggLcNl-----   90 (128)
                      +.-|-|++|++-+++|.+  .+.|+++..-|..|.-.|.-+.||..+      +..+.+++..+..+|.=.|=|.     
T Consensus         5 p~~~~l~ql~~~L~~~~s~d~~~r~~A~~~L~~~~~~p~~~~~L~~l------l~~~~~~~~~~R~~A~i~Lkn~i~~~w   78 (888)
T d1qbkb_           5 PDEQGLQQILQLLKESQSPDTTIQRTVQQKLEQLNQYPDFNNYLIFV------LTKLKSEDEPTRSLSGLILKNNVKAHF   78 (888)
T ss_dssp             HHHTTHHHHHHHHTTCCHHHHHHHHHHTTSTTTSTTSTTTTTCTTSS------STTTSCSTTTHHHHTTGGGGGTHHHHT
T ss_pred             CChHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhCCCHHHHHHHH------HHhcCCCCHHHHHHHHHHHHHHHHHhh
Confidence            345678999999988765  567888888999998888766555332      1223334444444443333332     


Q ss_pred             -ccChhhHHHHHhcCChhhHHhhhcCCCh
Q 033071           91 -SVDPANAAIITKSGGIPLIIECLSSPVR  118 (128)
Q Consensus        91 -clDp~n~~~I~~~ggi~~i~~~LsS~~e  118 (128)
                       .+|++.+++|...     +..+|.++++
T Consensus        79 ~~~~~~~~~~Ik~~-----ll~~l~~~~~  102 (888)
T d1qbkb_          79 QNFPNGVTDFIKSE-----CLNNIGDSSP  102 (888)
T ss_dssp             TCSTTTCCHHHHHH-----HTTGGGCCCS
T ss_pred             ccCCHHHHHHHHHH-----HHHHHcCCCH
Confidence             2577777777542     4445555543


No 28 
>d1n4ka1 a.118.22.1 (A:436-602) IP3 receptor type 1 binding core, domain 2 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=48.90  E-value=9.5  Score=27.00  Aligned_cols=56  Identities=14%  Similarity=0.285  Sum_probs=40.7

Q ss_pred             HHHHhhcchhHHHHhhcCCcH----------------------HHHHHHhhhhhhcccC-hhhHHHHHhcCChhhHHhhh
Q 033071           57 TFLRQLNVLELFLDCITEPNE----------------------KLVEFGVGGICNASVD-PANAAIITKSGGIPLIIECL  113 (128)
Q Consensus        57 ~~Lrql~vidlFld~L~~~n~----------------------~l~efaiggLcNlclD-p~n~~~I~~~ggi~~i~~~L  113 (128)
                      .-||+.+++++.+++|..|..                      .+...+--=|=+.|.| ++|++++.++  ++.....+
T Consensus        73 kLLReq~ii~~l~~iL~~pf~~~~~~~~~~l~e~~d~~~~~~~~i~rlcy~~L~~~c~~n~~NQ~~l~k~--i~~f~~qi  150 (167)
T d1n4ka1          73 KLMREQNILKQIFKLLQAPFTDCGDGPMLRLEELGDQRHAPFRHICRLCYRVLRHSQQDYRKNQEYIAKQ--FGFMQKQI  150 (167)
T ss_dssp             HHHHHTTHHHHHHHHHHGGGC-----------------CHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH--HHHHHHHH
T ss_pred             HHHHHhCHHHHHHHHHhhhhhccccchHhhHHHHHHhhhHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHH--HHHHHHHh
Confidence            458999999999999986521                      2344444556677888 9999999976  77776654


Q ss_pred             c
Q 033071          114 S  114 (128)
Q Consensus       114 s  114 (128)
                      .
T Consensus       151 ~  151 (167)
T d1n4ka1         151 G  151 (167)
T ss_dssp             C
T ss_pred             C
Confidence            3


No 29 
>d2pzza1 d.77.1.2 (A:2-134) Hypotheical protein MJ1564 {Methanocaldococcus jannaschii [TaxId: 2190]}
Probab=44.39  E-value=4.1  Score=27.61  Aligned_cols=63  Identities=19%  Similarity=0.181  Sum_probs=44.3

Q ss_pred             HHHHhhcchhHHHHhhcCC---cH----HHHHHHhhhhhhcccChhhHHHHHhcCChhhHHhhhcCCChhhhhhcccC
Q 033071           57 TFLRQLNVLELFLDCITEP---NE----KLVEFGVGGICNASVDPANAAIITKSGGIPLIIECLSSPVRNTVNQRFLP  127 (128)
Q Consensus        57 ~~Lrql~vidlFld~L~~~---n~----~l~efaiggLcNlclDp~n~~~I~~~ggi~~i~~~LsS~~e~tVl~a~t~  127 (128)
                      ..||+-.++|...+.|...   |-    -=.+-|..|-+++|.|+.        |+|...+....+++.+-+.--|+|
T Consensus        55 ~~lr~~~ildtar~~l~~~~~~~~~~F~l~KQAA~~Gkvsf~~~~~--------g~i~~~I~~~~~~~~~~ii~wlap  124 (133)
T d2pzza1          55 ELLRSQSILDAARMVLEKGMTENATKFYLNKQAAYVGAVNFDIDTH--------GGIFVKILADENEDIMKIIKDIAP  124 (133)
T ss_dssp             HHHHHTTCHHHHHHHHHHTCCSSEEEEEECHHHHHTTCCCCSCCTT--------CCEEEEEECCTTSCHHHHHHHHSC
T ss_pred             HHHHHhhhHHHHHHHHHhCccCCEEEEEEehhHHhCCceEEecCCC--------CCceEEEEeccCcCHHHHHHHhcC
Confidence            4566667888888777654   11    125678899999998873        777777766677777777777776


No 30 
>d2vgla_ a.118.1.10 (A:) Adaptin alpha C subunit N-terminal fragment {Mouse (Mus musculus) [TaxId: 10090]}
Probab=43.47  E-value=14  Score=28.91  Aligned_cols=62  Identities=13%  Similarity=0.152  Sum_probs=42.2

Q ss_pred             HHHHHHhhcCChHHHHHHHHHHhhhhccCCCcHHHHHhhcchhHHHHhhcCCcHHHHHHHhhhhhhcc
Q 033071           24 QELVSQFQNSTDEERKEKIVANLANFAYDPYNYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNAS   91 (128)
Q Consensus        24 q~LV~Efq~t~~~eakeqvlAnLaNFAyDP~N~~~Lrql~vidlFld~L~~~n~~l~efaiggLcNlc   91 (128)
                      ...+.-....++...|...+.=|.+.+ |+.|+..     +++-++..+.+.++.+++-++-+|+.+|
T Consensus       363 ~~il~~l~~~~~~~Ir~~aL~lL~~L~-n~~Ni~~-----Iv~eL~~yl~~~d~~~k~~~i~~I~~la  424 (584)
T d2vgla_         363 ETVINALKTERDVSVRQRAVDLLYAMC-DRSNAQQ-----IVAEMLSYLETADYSIREEIVLKVAILA  424 (584)
T ss_dssp             HHHHHHHTTCCCHHHHHHHHHHHHHHC-CHHHHHH-----HHHHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHhcccCchhHHHHHHHHHHHHhC-CHHHHHH-----HHHHHHHHHhhCCHHHHHHHHHHHHHHH
Confidence            333433444555566666555555554 5677664     5778888888888889998888888886


No 31 
>d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]}
Probab=43.07  E-value=54  Score=26.41  Aligned_cols=62  Identities=13%  Similarity=0.120  Sum_probs=47.5

Q ss_pred             cchhHHHHhhcCCcHHHHHHHhhhhhhcccC-h-hhHHHHHhcCChhhHHhhhcCCChhhhhhccc
Q 033071           63 NVLELFLDCITEPNEKLVEFGVGGICNASVD-P-ANAAIITKSGGIPLIIECLSSPVRNTVNQRFL  126 (128)
Q Consensus        63 ~vidlFld~L~~~n~~l~efaiggLcNlclD-p-~n~~~I~~~ggi~~i~~~LsS~~e~tVl~a~t  126 (128)
                      ..++.+...|.++++.+...++.++--++-| + ....++..-  |+.+..+|+.++.++-..|++
T Consensus       962 ~~lp~L~~~l~~~~~~~r~~ai~~l~~~~~~~~~~~~~~l~~l--i~~ll~~l~d~~~~vR~~al~ 1025 (1207)
T d1u6gc_         962 TLLPRLKGYLISGSSYARSSVVTAVKFTISDHPQPIDPLLKNC--IGDFLKTLEDPDLNVRRVALV 1025 (1207)
T ss_dssp             GTHHHHTTTSSSSCHHHHHHHHHHTGGGCCSSCCTHHHHHHHH--STTTHHHHSSSSTHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhcchhhHHHHHHH--HHHHHHHhCCCCHHHHHHHHH
Confidence            3578888999999999999999998877765 2 233444433  788889999999998777764


No 32 
>d1wa5c_ a.118.1.1 (C:) Exportin Cse1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=39.04  E-value=33  Score=26.75  Aligned_cols=37  Identities=14%  Similarity=0.005  Sum_probs=29.2

Q ss_pred             HHHHHHHhhcCChHHHHHHHHHHhhhhccCCCcHHHH
Q 033071           23 LQELVSQFQNSTDEERKEKIVANLANFAYDPYNYTFL   59 (128)
Q Consensus        23 Lq~LV~Efq~t~~~eakeqvlAnLaNFAyDP~N~~~L   59 (128)
                      |+.|+.-+++|.+.+.++|+-+.|..+--+|.-+.+|
T Consensus         4 ~~~l~~ll~~s~~~~~~k~Ae~~L~~~~~~p~f~~~L   40 (959)
T d1wa5c_           4 LETVAKFLAESVIASTAKTSERNLRQLETQDGFGLTL   40 (959)
T ss_dssp             HHHHHHHHHHTTSGGGHHHHHHHHHHHHTSTTHHHHH
T ss_pred             HHHHHHHHHHCCChHHHHHHHHHHHHHHcCCCHHHHH
Confidence            4567777778888899999999999998888544444


No 33 
>d1w36b1 c.37.1.19 (B:1-485) Exodeoxyribonuclease V beta chain (RecB), N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=37.92  E-value=2.3  Score=31.38  Aligned_cols=20  Identities=15%  Similarity=0.451  Sum_probs=16.3

Q ss_pred             HHHHhhcCChHHHHHHHHHHhh
Q 033071           26 LVSQFQNSTDEERKEKIVANLA   47 (128)
Q Consensus        26 LV~Efq~t~~~eakeqvlAnLa   47 (128)
                      ||||||+|+..  |-+++..|+
T Consensus       382 lVDEfQDts~~--Q~~ll~~L~  401 (485)
T d1w36b1         382 MIDEFQDTDPQ--QYRIFRRIW  401 (485)
T ss_dssp             EECSGGGCCHH--HHHHHHHHH
T ss_pred             EecccccCCHH--HHHHHHHHH
Confidence            89999999864  567788885


No 34 
>d1g7da_ a.71.1.1 (A:) Endoplasmic reticulum protein ERP29, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=34.81  E-value=12  Score=24.35  Aligned_cols=28  Identities=21%  Similarity=0.341  Sum_probs=22.3

Q ss_pred             ChHHHHHHHHHHhhcCChHHHHHHHHHH
Q 033071           18 PRLQYLQELVSQFQNSTDEERKEKIVAN   45 (128)
Q Consensus        18 ~R~eyLq~LV~Efq~t~~~eakeqvlAn   45 (128)
                      ||.+-+..||.+|-.+++.+.+++++.-
T Consensus         2 G~i~~lD~la~~F~~~~~~~~r~~i~~~   29 (106)
T d1g7da_           2 GCLPAYDALAGQFIEASSREARQAILKQ   29 (106)
T ss_dssp             CCCTHHHHHHHHHHHCCSHHHHHHHHHH
T ss_pred             CchHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence            4667788999999888888887776654


No 35 
>d1dvpa1 a.118.9.2 (A:1-145) Hrs {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=33.93  E-value=20  Score=23.82  Aligned_cols=34  Identities=15%  Similarity=0.265  Sum_probs=27.0

Q ss_pred             ChHHHHHHHHHHhhcCChHHHHHHHHHHhhhhcc
Q 033071           18 PRLQYLQELVSQFQNSTDEERKEKIVANLANFAY   51 (128)
Q Consensus        18 ~R~eyLq~LV~Efq~t~~~eakeqvlAnLaNFAy   51 (128)
                      ...+++..|+.-....++...|++++.=+-++++
T Consensus        82 ~s~~fl~~l~~l~~~~~~~~Vk~kil~li~~W~~  115 (145)
T d1dvpa1          82 FTKENCEMFSSFLESTPHENVRQKMLELVQTWAY  115 (145)
T ss_dssp             SSHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Confidence            4468888988888777888999999988887443


No 36 
>d2g0ua1 a.2.20.1 (A:1-84) BsaL needle protein {Burkholderia pseudomallei [TaxId: 28450]}
Probab=32.06  E-value=32  Score=22.01  Aligned_cols=45  Identities=18%  Similarity=0.266  Sum_probs=38.7

Q ss_pred             hHHHHHHHHHHhhcCChHHHHHHHHHHhhhhccCCCcHHHHHhhcc
Q 033071           19 RLQYLQELVSQFQNSTDEERKEKIVANLANFAYDPYNYTFLRQLNV   64 (128)
Q Consensus        19 R~eyLq~LV~Efq~t~~~eakeqvlAnLaNFAyDP~N~~~Lrql~v   64 (128)
                      --.||..+-..| ++.-..+-+||-..|.+..-+|.|-..|.+++.
T Consensus        14 ~~gyl~~v~~~f-~~~~~~~~~~v~~Al~aL~~~psdPa~LA~yQ~   58 (84)
T d2g0ua1          14 WSGYLTGIGRAF-DDGVKDLNKQLQDAQANLTKNPSDPTALANYQM   58 (84)
T ss_dssp             STHHHHHHHGGG-CTTTHHHHHHHHHHHHHHHHSTTCHHHHHHHHH
T ss_pred             ccchHHHHHHHH-HHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence            345999988888 778888999999999999999999999988753


No 37 
>d1uptb_ a.193.1.1 (B:) Golgi autoantigen, golgin-245 {Human (Homo sapiens) [TaxId: 9606]}
Probab=31.47  E-value=30  Score=20.81  Aligned_cols=35  Identities=14%  Similarity=0.445  Sum_probs=29.4

Q ss_pred             ChHHHHHHHHHHhhcCChHHHHHHHHHHhhhhccC
Q 033071           18 PRLQYLQELVSQFQNSTDEERKEKIVANLANFAYD   52 (128)
Q Consensus        18 ~R~eyLq~LV~Efq~t~~~eakeqvlAnLaNFAyD   52 (128)
                      .++|||....=||-..+....--.|++.++-|.-|
T Consensus         3 tE~EYLRnvLfeYMmG~E~~tlaKVi~av~kF~~~   37 (58)
T d1uptb_           3 TEFEYLRKVLFEYMMGRETKTMAKVITTVLKFPDD   37 (58)
T ss_dssp             HHHHHHHHHHHHHHTTSSHHHHHHHHHHHTTCCHH
T ss_pred             HHHHHHHHHHHHHHcCcchhHHHHHHHHHHhCCHH
Confidence            37899999999998888778888999999877543


No 38 
>d1qgra_ a.118.1.1 (A:) Importin beta {Human (Homo sapiens) [TaxId: 9606]}
Probab=28.56  E-value=98  Score=23.17  Aligned_cols=71  Identities=7%  Similarity=0.167  Sum_probs=48.6

Q ss_pred             HHHHHHHHHHhhcCChHHHHHHHHHHhhhhccCCCcHHHHHh--hcchhHHHHhhcCCcHHHHHHHhhhhhhcc
Q 033071           20 LQYLQELVSQFQNSTDEERKEKIVANLANFAYDPYNYTFLRQ--LNVLELFLDCITEPNEKLVEFGVGGICNAS   91 (128)
Q Consensus        20 ~eyLq~LV~Efq~t~~~eakeqvlAnLaNFAyDP~N~~~Lrq--l~vidlFld~L~~~n~~l~efaiggLcNlc   91 (128)
                      .+++-..+.+.-...+...|+-.+..|..++-.+.... +..  -.+++.++..+.++++.+...|+-.+..+|
T Consensus       364 ~~~~~~~i~~~l~~~~~~~r~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~l~~~l~d~~~~vr~~a~~~l~~~~  436 (876)
T d1qgra_         364 VPHVLPFIKEHIKNPDWRYRDAAVMAFGCILEGPEPSQ-LKPLVIQAMPTLIELMKDPSVVVRDTAAWTVGRIC  436 (876)
T ss_dssp             HHHHHHHHHHHTTCSSHHHHHHHHHHHHHTSSSSCHHH-HHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHH
T ss_pred             hhhhHHHHHHhhccchHHHHHHHHHHHHhhhhhhhHHH-HHHHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHH
Confidence            45555666666667777888888888888775443222 222  267889999999999988887765555443


No 39 
>d2nojb1 a.7.17.1 (B:52-109) Uncharacterized protein SAV1155 {Staphylococcus aureus [TaxId: 1280]}
Probab=27.19  E-value=20  Score=21.44  Aligned_cols=30  Identities=27%  Similarity=0.363  Sum_probs=24.1

Q ss_pred             HHHHHHHhhcCChH--HHHHHHHHHhhhhccC
Q 033071           23 LQELVSQFQNSTDE--ERKEKIVANLANFAYD   52 (128)
Q Consensus        23 Lq~LV~Efq~t~~~--eakeqvlAnLaNFAyD   52 (128)
                      -|.||.||..|...  -.|-|-.-||-.|-|.
T Consensus         7 aq~~v~~f~kt~tvs~hrkaqkavnlv~f~~~   38 (58)
T d2nojb1           7 AQKAVELFKRTRTVATHRKAQRAVNLIHFQHS   38 (58)
T ss_dssp             HHHHHHHHHHHCCHHHHHHHHHHHHHCCCTTC
T ss_pred             HHHHHHHHHHhhHHHHHHHHHHHhhHhhHHHH
Confidence            37899999987654  5677888899999885


No 40 
>d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.56  E-value=36  Score=27.54  Aligned_cols=66  Identities=14%  Similarity=0.153  Sum_probs=40.9

Q ss_pred             HHHHHhhcCChHHHHHHHHHHhhhhccC--CCcHHHHHhhcchhHHHHhhcCCcHHHHHHHhhhhhhccc
Q 033071           25 ELVSQFQNSTDEERKEKIVANLANFAYD--PYNYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNASV   92 (128)
Q Consensus        25 ~LV~Efq~t~~~eakeqvlAnLaNFAyD--P~N~~~Lrql~vidlFld~L~~~n~~l~efaiggLcNlcl   92 (128)
                      .|.+......+...|..++.-|+..+.-  +.=.++  .-.+++.++..|.++++.+...|+.+|+.++.
T Consensus       134 ~l~~~~~~~~~~~v~~~al~~l~~l~~~~g~~l~~~--~~~il~~l~~~l~~~~~~vR~~A~~~l~~l~~  201 (1207)
T d1u6gc_         134 RLTSAIAKQEDVSVQLEALDIMADMLSRQGGLLVNF--HPSILTCLLPQLTSPRLAVRKRTIIALGHLVM  201 (1207)
T ss_dssp             HHHHHHSCCSCHHHHHHHHHHHHHHHHHTCSSCTTT--HHHHHHHHGGGGGCSSHHHHHHHHHHHHHHTT
T ss_pred             HHHHhhcCCCCHHHHHHHHHHHHHHHHHhhHhhHHH--HHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHH
Confidence            3344444455556666555544433221  111111  23578899999999999999999999888753


No 41 
>d2i9ca1 a.118.1.25 (A:3-123) Hypothetical protein RPA1889 {Rhodopseudomonas palustris [TaxId: 1076]}
Probab=24.22  E-value=57  Score=21.76  Aligned_cols=43  Identities=16%  Similarity=0.074  Sum_probs=32.0

Q ss_pred             HHHhh--cchhHHHHhhcCCcHHHHHHHhhhhhhcccChhhHHHHHh
Q 033071           58 FLRQL--NVLELFLDCITEPNEKLVEFGVGGICNASVDPANAAIITK  102 (128)
Q Consensus        58 ~Lrql--~vidlFld~L~~~n~~l~efaiggLcNlclDp~n~~~I~~  102 (128)
                      .|..-  +-.+.|+.+|+.+|+.+.--|++-+  |..||.-+..+++
T Consensus        48 eLk~~~g~~R~aLl~Ll~h~n~~VRl~AA~~t--L~~~p~~A~~vL~   92 (121)
T d2i9ca1          48 ELKARDGDQRTALLSLFEYPNMQVRLQAAKLT--LAVAPVKAREQLE   92 (121)
T ss_dssp             HHHHSTTCGGGGGGGGGGSSCHHHHHHHHHTT--TTTCHHHHHHHHH
T ss_pred             HHHhcCccHHHHHHHHHHCCCHHHHHHHHHHH--HhcChHHHHHHHH
Confidence            34444  3389999999999998888777665  6778876666665


No 42 
>d1y14a_ a.60.8.2 (A:) RNA polymerase II subunit RBP4 (RpoF) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=23.46  E-value=30  Score=24.66  Aligned_cols=59  Identities=19%  Similarity=0.260  Sum_probs=39.1

Q ss_pred             cCChHHHHHHHHHHhhhhcc--CCCcHHHHHhhcchhHHHHhhcCCcHHHHHHHhhhhhhcccC-hhhHHHHH
Q 033071           32 NSTDEERKEKIVANLANFAY--DPYNYTFLRQLNVLELFLDCITEPNEKLVEFGVGGICNASVD-PANAAIIT  101 (128)
Q Consensus        32 ~t~~~eakeqvlAnLaNFAy--DP~N~~~Lrql~vidlFld~L~~~n~~l~efaiggLcNlclD-p~n~~~I~  101 (128)
                      .+++.+.-++.+.=+-+|+.  +|..-..+|++         |.  +..|-+|-++-|+|||++ ++-+..++
T Consensus        89 sg~~~~v~~kTldYl~~Fsk~k~~es~~~vrel---------L~--~~~L~~fE~a~L~NLcPet~eEAkaLi  150 (176)
T d1y14a_          89 TGGNNKDLKNTMQYLTNFSRFRDQETVGAVIQL---------LK--STGLHPFEVAQLGSLACDTADEAKTLI  150 (176)
T ss_dssp             SCSCCHHHHHHHHHHHHHCSCCSHHHHHHHHHH---------HH--TTTCCHHHHHHHHHSCCSSHHHHHHHS
T ss_pred             CCCchHHHHHHHHHHHHhccCCCHHHHHHHHHH---------HH--hcCCCHHHHHHhhccCCCCHHHHHHHh
Confidence            45567777888888888884  34444444442         22  224888999999999987 44444443


No 43 
>d1yira2 d.41.2.2 (A:4-144) Nicotinate phosphoribosyltransferase, N-terminal domain {Pseudomonas aeruginosa [TaxId: 287]}
Probab=20.81  E-value=22  Score=24.02  Aligned_cols=36  Identities=17%  Similarity=0.237  Sum_probs=30.5

Q ss_pred             HHHHHHHhhhhccCCCcHHHHHhhc-chhHHHHhhcC
Q 033071           39 KEKIVANLANFAYDPYNYTFLRQLN-VLELFLDCITE   74 (128)
Q Consensus        39 keqvlAnLaNFAyDP~N~~~Lrql~-vidlFld~L~~   74 (128)
                      -++++..|.||...+.--.|||+++ .-+-|+|-|..
T Consensus        55 l~~~i~~l~~lrFt~eei~yL~~~~~f~~~fldyL~~   91 (141)
T d1yira2          55 IREQLEYLAGLAISDEQLAFLERIPFLAPDFIRFLGL   91 (141)
T ss_dssp             HHHHHHHHHHCCCCHHHHHHHHTSTTSCHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCHHHHHHHHcCCCCCHHHHHHHHh
Confidence            3567899999999999999999997 45778888874


No 44 
>d1ujka_ a.118.9.2 (A:) ADP-ribosylation factor binding protein Gga1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.51  E-value=37  Score=22.58  Aligned_cols=34  Identities=26%  Similarity=0.456  Sum_probs=26.5

Q ss_pred             ChHHHHHHHHHHhh-----cCChHHHHHHHHHHhhhhcc
Q 033071           18 PRLQYLQELVSQFQ-----NSTDEERKEKIVANLANFAY   51 (128)
Q Consensus        18 ~R~eyLq~LV~Efq-----~t~~~eakeqvlAnLaNFAy   51 (128)
                      ...+|+..|+.-+.     .+++.+.|+.++.=+..++.
T Consensus        85 as~~Fl~~L~kli~~k~~~~~~~~~Vk~kil~li~~W~~  123 (145)
T d1ujka_          85 GKFRFLNELIKVVSPKYLGSRTSEKVKNKILELLYSWTV  123 (145)
T ss_dssp             TSHHHHHHHHHHHCTTTTGGGSCHHHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHH
Confidence            45789999988875     34778999999998877554


No 45 
>d2goma1 a.7.17.1 (A:105-165) Fibrinogen-binding protein Efb (Fib) {Staphylococcus aureus [TaxId: 1280]}
Probab=20.49  E-value=32  Score=20.64  Aligned_cols=31  Identities=32%  Similarity=0.542  Sum_probs=24.4

Q ss_pred             HHHHHHHhhcCChH--HHHHHHHHHhhhhccCC
Q 033071           23 LQELVSQFQNSTDE--ERKEKIVANLANFAYDP   53 (128)
Q Consensus        23 Lq~LV~Efq~t~~~--eakeqvlAnLaNFAyDP   53 (128)
                      -|.+|.||..|...  -.|-|-.-||-.|-|.-
T Consensus        10 AQ~~V~~F~~T~TVs~HRKAQ~AVNLi~F~~~~   42 (61)
T d2goma1          10 AQNLVREFEKTHTVSAHRKAQKAVNLVSFEYKV   42 (61)
T ss_dssp             HHHHHHHHHHHCBHHHHHHHHHHHHHSCGGGHH
T ss_pred             HHHHHHHHHHhhHHHHHHHHHHHhhHHHHHHHH
Confidence            37899999987654  56778888999998853


Done!