Query 033078
Match_columns 128
No_of_seqs 121 out of 1051
Neff 6.8
Searched_HMMs 29240
Date Mon Mar 25 15:35:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033078.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/033078hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1r94_A Protein YFHF; tetrameri 100.0 6.9E-38 2.4E-42 218.8 9.9 109 9-120 2-111 (118)
2 1nwb_A Hypothetical protein AQ 100.0 3.5E-38 1.2E-42 222.1 7.7 112 6-120 6-119 (124)
3 1x0g_A ISCA; [2Fe-2S], biosynt 100.0 3.7E-38 1.3E-42 218.1 5.3 106 10-118 2-111 (112)
4 2d2a_A SUFA protein; iron-sulf 100.0 1.4E-36 4.7E-41 219.3 9.8 104 10-116 41-145 (145)
5 2apn_A Protein HI1723; HI1723 100.0 9.2E-37 3.1E-41 211.5 5.8 105 9-116 8-114 (114)
6 2k4z_A DSRR; ISCA/SUFA/HESB li 99.9 1.9E-26 6.4E-31 162.5 10.1 96 8-109 21-121 (125)
7 2p2e_A Putative Fe-S biosynthe 99.8 1.9E-20 6.6E-25 132.2 4.8 94 8-105 3-115 (128)
8 2qgo_A Putative Fe-S biosynthe 99.8 1.5E-19 5.3E-24 129.5 2.9 89 8-103 4-103 (141)
9 1fiw_L Beta-acrosin light chai 40.5 13 0.00045 18.4 1.3 19 109-127 8-26 (26)
10 2hgo_A CASSIICOLIN; toxin, dis 36.5 5.9 0.0002 19.6 -0.4 11 107-117 13-25 (27)
11 1xrx_A SEQA protein; protein f 33.3 19 0.00066 20.5 1.4 26 3-31 12-37 (50)
12 1zfd_A SWI5; DNA binding motif 26.6 28 0.00095 15.8 1.2 11 107-117 5-18 (32)
13 4es1_A BH0342 protein; ferredo 25.7 1.2E+02 0.0042 19.4 4.6 33 10-45 45-80 (100)
14 1p7a_A BF3, BKLF, kruppel-like 23.4 30 0.001 16.4 1.0 11 107-117 13-24 (37)
15 1ncs_A Peptide M30F, transcrip 22.3 27 0.00091 18.1 0.7 13 106-118 19-34 (47)
16 1sp2_A SP1F2; zinc finger, tra 21.8 30 0.001 15.7 0.7 11 107-117 4-17 (31)
17 2elr_A Zinc finger protein 406 20.3 55 0.0019 15.1 1.6 12 106-117 10-22 (36)
No 1
>1r94_A Protein YFHF; tetrameric, beta barrel, iron-sulfur cluster protein, pseudo-symmetric motifs, metal transport; 2.30A {Escherichia coli} SCOP: b.124.1.1 PDB: 1r95_A 1s98_A
Probab=100.00 E-value=6.9e-38 Score=218.77 Aligned_cols=109 Identities=39% Similarity=0.731 Sum_probs=89.7
Q ss_pred hcccCHhHHHHHHHHHHHHhcCC-CCcEEEEEecCCCCCceeeeecccccccCCceeeeCCEEEEEccCchhhcCCcEEE
Q 033078 9 AEKIGPAVRRQAVTVRHLLQQRQ-RPYLKLGVKARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMD 87 (128)
Q Consensus 9 ~~~IT~~A~~~~~~ik~ll~~~~-~~~IRI~v~~~GC~G~~y~l~l~~~~~e~D~v~~~~Gi~~~id~~~~~~L~g~~ID 87 (128)
.|+|||+|+++ |++++++++ ..+|||+|+.+||+|++|+|.++++++++|.+++.+|++|+||+.+++||+|++||
T Consensus 2 ~I~iT~~A~~~---l~~ll~~~~~~~~LRv~V~~gGCsG~~y~l~~~~~~~~~D~v~e~~Gv~v~vd~~s~~~L~g~~ID 78 (118)
T 1r94_A 2 SITLSDSAAAR---VNTFLANRGKGFGLRLGVRTSGCSGMAYVLEFVDEPTPEDIVFEDKGVKVVVDGKSLQFLDGTQLD 78 (118)
T ss_dssp CCEECHHHHHH---HHHHHHHHCCCSEEEEEEEECSSSCEEEEEEEESSCCTTEEEEEETTEEEEEEGGGHHHHTTCEEE
T ss_pred ceEECHHHHHH---HHHHHhhCCCCceEEEEEECCCCCCeEEEEEEccCCCCCceEEEECCEEEEEEHHHHHHhCCCEEE
Confidence 37899999999 999997654 46899999999999999999998888899999999999999999999999999999
Q ss_pred eeeCCCCceEEEeCCCCCCCCCCCCCcCcCCCC
Q 033078 88 FVDDKLRSEFVFINPNSKGQCGCGESFMTTSSS 120 (128)
Q Consensus 88 y~e~~~g~gF~i~nP~~~~~CgCG~sf~~~~~~ 120 (128)
|+++..+++|+|.|||+..+||||+||+.+...
T Consensus 79 y~~~~~g~gF~~~NPna~~~CgCG~SF~~~~~~ 111 (118)
T 1r94_A 79 FVKEGLNEGFKFTNPNVKDECGCGESFKLAAAL 111 (118)
T ss_dssp EEEETTEEEEEEECTTCCC--------------
T ss_pred EEcCCCcCceEEeCCCCCCCCCCCCCcCCCCCc
Confidence 999999999999999999999999999987654
No 2
>1nwb_A Hypothetical protein AQ_1857; QR6, structural genomics, protein structure initiative, NESG, reduced dimensionality PSI; NMR {Aquifex aeolicus} SCOP: b.124.1.1
Probab=100.00 E-value=3.5e-38 Score=222.06 Aligned_cols=112 Identities=31% Similarity=0.609 Sum_probs=87.9
Q ss_pred hhhhcccCHhHHHHHHHHHHHHhcCC--CCcEEEEEecCCCCCceeeeecccccccCCceeeeCCEEEEEccCchhhcCC
Q 033078 6 AQAAEKIGPAVRRQAVTVRHLLQQRQ--RPYLKLGVKARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIG 83 (128)
Q Consensus 6 ~~~~~~IT~~A~~~~~~ik~ll~~~~--~~~IRI~v~~~GC~G~~y~l~l~~~~~e~D~v~~~~Gi~~~id~~~~~~L~g 83 (128)
++..|+|||+|+++ |+++++.++ +.+|||+|+.+||+|++|+|.+++++.++|.+++.+|++|+||+.+++||+|
T Consensus 6 ~~m~I~iT~~A~~~---l~~ll~~~~~~~~~LRv~V~~gGCsG~~y~l~~~~~~~~~D~v~e~~Gv~v~VD~~s~~~L~G 82 (124)
T 1nwb_A 6 QQFIFKVTDKAVEE---IKKVAQENNIENPILRIRVVPGGCSGFQYAMGFDDTVEEGDHVFEYDGVKVVIDPFSMPYVNG 82 (124)
T ss_dssp CCCCCEECHHHHHH---HHHHHHTTTCSSCEEEECCCCCCTTCCCCCCCEECSCCSSCCCCCCSSSEEEECTTTGGGSTT
T ss_pred cCceEEECHHHHHH---HHHHHhhCCCCCceEEEEEEcCCCCCcEEEEEEccCCCCCceEEEeCCEEEEEehHHHHHhCC
Confidence 34569999999999 999998775 4589999999999999999999988789999999999999999999999999
Q ss_pred cEEEeeeCCCCceEEEeCCCCCCCCCCCCCcCcCCCC
Q 033078 84 TKMDFVDDKLRSEFVFINPNSKGQCGCGESFMTTSSS 120 (128)
Q Consensus 84 ~~IDy~e~~~g~gF~i~nP~~~~~CgCG~sf~~~~~~ 120 (128)
++|||+++..+++|+|+|||+..+||||+||+.++.+
T Consensus 83 ~~IDy~~~~~g~gF~~~NPna~~~CgCG~SF~~~~~~ 119 (124)
T 1nwb_A 83 AELDYVVDFMGGGFTIRNPNATGSCGCGSSFSCGLEH 119 (124)
T ss_dssp CEEEEEEETTEEEEEEECC------------------
T ss_pred CEEEEEcCCCcceEEEeCCCCCcCCCCCCCcCCCccc
Confidence 9999999999999999999999999999999988765
No 3
>1x0g_A ISCA; [2Fe-2S], biosynthesis, cyanobacteria, domain swapping, Fe- S cluster, iron, iron-sulfur cluster protein, scaffold, sulfur; 2.50A {Thermosynechococcus elongatus}
Probab=100.00 E-value=3.7e-38 Score=218.07 Aligned_cols=106 Identities=26% Similarity=0.529 Sum_probs=96.2
Q ss_pred cccCHhHHHHHHHHHHHHhcC-C---CCcEEEEEecCCCCCceeeeecccccccCCceeeeCCEEEEEccCchhhcCCcE
Q 033078 10 EKIGPAVRRQAVTVRHLLQQR-Q---RPYLKLGVKARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTK 85 (128)
Q Consensus 10 ~~IT~~A~~~~~~ik~ll~~~-~---~~~IRI~v~~~GC~G~~y~l~l~~~~~e~D~v~~~~Gi~~~id~~~~~~L~g~~ 85 (128)
++|||+|+++ |+++++++ + +.+|||+|+.+||+|++|+|.++++++++|.+++.+|++|+||+.+++||+|++
T Consensus 2 i~iT~~A~~~---l~~ll~~~~~~~~~~~lRv~v~~gGCsG~~y~l~~~~~~~~~D~v~e~~Gv~v~vd~~s~~~l~g~~ 78 (112)
T 1x0g_A 2 VELTPAAIQE---LERLQTHGVRRGQAAILRIQVQPSECGDWRYDLALVAEPKPTDLLTQSQGWTIAIAAEAAELLRGLR 78 (112)
T ss_dssp CEECHHHHHH---TCCCC----------CEEEEEEEBSSSSEEEEEEECSSCCTTCEEECSSSCCEEECGGGHHHHTTCE
T ss_pred eEECHHHHHH---HHHHHhhccCCCCceEEEEEEEcCCCCCeEEEEEECcCCCCCCEEEEeCCEEEEEeHHHHHHhCCCE
Confidence 7899999999 99998776 4 348999999999999999999998888999999999999999999999999999
Q ss_pred EEeeeCCCCceEEEeCCCCCCCCCCCCCcCcCC
Q 033078 86 MDFVDDKLRSEFVFINPNSKGQCGCGESFMTTS 118 (128)
Q Consensus 86 IDy~e~~~g~gF~i~nP~~~~~CgCG~sf~~~~ 118 (128)
|||+++..+.+|+|+|||+..+||||+||+.+.
T Consensus 79 IDy~~~~~g~gF~~~nPna~~~CgCG~SF~~~~ 111 (112)
T 1x0g_A 79 VDYIEDLMGGAFRFHNPNASQTCGCGMAFRVSR 111 (112)
T ss_dssp EEEEEETTEEEEEEECTTCSEECSSSSEEECCC
T ss_pred EEEEecCCCCEEEEeCCCCCcCCCCCCccccCC
Confidence 999999999999999999999999999999764
No 4
>2d2a_A SUFA protein; iron-sulfur cluster, iron, ISCA, YADR, metal transport; 2.70A {Escherichia coli}
Probab=100.00 E-value=1.4e-36 Score=219.28 Aligned_cols=104 Identities=37% Similarity=0.672 Sum_probs=98.8
Q ss_pred cccCHhHHHHHHHHHHHHhcCC-CCcEEEEEecCCCCCceeeeecccccccCCceeeeCCEEEEEccCchhhcCCcEEEe
Q 033078 10 EKIGPAVRRQAVTVRHLLQQRQ-RPYLKLGVKARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDF 88 (128)
Q Consensus 10 ~~IT~~A~~~~~~ik~ll~~~~-~~~IRI~v~~~GC~G~~y~l~l~~~~~e~D~v~~~~Gi~~~id~~~~~~L~g~~IDy 88 (128)
|+|||+|+++ |++++++++ ..+|||+|+++||+|++|+|.++++++++|.+++.+|++|+||+.+++||+|++|||
T Consensus 41 ItiTe~Aa~~---lk~ll~~~~~~~~LRv~V~~gGCsG~~Y~l~l~~~~~~~D~v~e~~Gv~v~VD~~s~~~L~G~~IDy 117 (145)
T 2d2a_A 41 LTLTPAAAIH---IRELVAKQPGMVGVRLGVKQTGCAGFGYVLDSVSEPDKDDLLFEHDGAKLFVPLQAMPFIDGTEVDF 117 (145)
T ss_dssp CEECHHHHHH---HHHHHHHSTTCCEEEEEEEEETTTEEEEEEEEESSCCTTEEEEEETTEEEEEEGGGHHHHTTCEEEE
T ss_pred EEECHHHHHH---HHHHHhcCCCCceEEEEEECCCCCCcEEEEEECcCCCCCCeEEEECCEEEEEeHHHHHhhCCCEEEE
Confidence 8999999999 999998764 468999999999999999999998888999999999999999999999999999999
Q ss_pred eeCCCCceEEEeCCCCCCCCCCCCCcCc
Q 033078 89 VDDKLRSEFVFINPNSKGQCGCGESFMT 116 (128)
Q Consensus 89 ~e~~~g~gF~i~nP~~~~~CgCG~sf~~ 116 (128)
+++..+++|+|+|||+..+||||+||+.
T Consensus 118 ~e~l~g~gF~f~NPna~~~CGCG~SF~v 145 (145)
T 2d2a_A 118 VREGLNQIFKFHNPKAQNECGCGESFGV 145 (145)
T ss_dssp EEETTEEEEEEECTTTCSCCCCBCEEEC
T ss_pred EcCCCcceEEEeCCCCCcccCCCCCccC
Confidence 9999999999999999999999999973
No 5
>2apn_A Protein HI1723; HI1723 solution structure, structural genomics, structure 2 function project, S2F, unknown function; NMR {Haemophilus influenzae}
Probab=100.00 E-value=9.2e-37 Score=211.54 Aligned_cols=105 Identities=29% Similarity=0.592 Sum_probs=98.5
Q ss_pred hcccCHhHHHHHHHHHHHHhcCC--CCcEEEEEecCCCCCceeeeecccccccCCceeeeCCEEEEEccCchhhcCCcEE
Q 033078 9 AEKIGPAVRRQAVTVRHLLQQRQ--RPYLKLGVKARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKM 86 (128)
Q Consensus 9 ~~~IT~~A~~~~~~ik~ll~~~~--~~~IRI~v~~~GC~G~~y~l~l~~~~~e~D~v~~~~Gi~~~id~~~~~~L~g~~I 86 (128)
.|+|||+|+++ |++++++++ +.+|||+++.+||+|++|.|.+++++.++|.+++.+|++|+||+.+++||+|++|
T Consensus 8 ~i~iT~~A~~~---i~~l~~~~~~~~~~lRi~v~~gGCsG~~y~l~~~~~~~~~D~v~e~~Gv~v~id~~s~~~l~g~~I 84 (114)
T 2apn_A 8 PLTFTDAAANK---VKSLISEEENTDLKLRVYITGGGCSGFQYGFTFDEKVNDGDLTIEKSGVQLVIDPMSLQYLIGGTV 84 (114)
T ss_dssp SCEECSHHHHH---HHHHHHHHTCSSCEEEECCCCSSSSCSCCCEEECCSCCSSCEEEECSSSEEEECHHHHHHHTTCEE
T ss_pred cEEECHHHHHH---HHHHHHhCCCCCceEEEEEeCCCCCCcEEEEEECcCCCCCCcEEEECCEEEEEehHHHHHhCCCEE
Confidence 48999999999 999987653 4689999999999999999999987788999999999999999999999999999
Q ss_pred EeeeCCCCceEEEeCCCCCCCCCCCCCcCc
Q 033078 87 DFVDDKLRSEFVFINPNSKGQCGCGESFMT 116 (128)
Q Consensus 87 Dy~e~~~g~gF~i~nP~~~~~CgCG~sf~~ 116 (128)
||+++..+++|+|+|||+..+||||+||+.
T Consensus 85 Dy~~~~~g~~F~~~nPna~~~CgCG~SF~~ 114 (114)
T 2apn_A 85 DYTEGLEGSRFTVNNPNATSTCGCGSSFSI 114 (114)
T ss_dssp EEECSSSCCEEEEECHHHHCCCCCCCCSCC
T ss_pred EEEcCCCcceEEEeCCCCCcCCCCCCCccC
Confidence 999999999999999999999999999973
No 6
>2k4z_A DSRR; ISCA/SUFA/HESB like fold, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Allochromatium vinosum}
Probab=99.94 E-value=1.9e-26 Score=162.47 Aligned_cols=96 Identities=25% Similarity=0.395 Sum_probs=88.9
Q ss_pred hhcccCHhHHHHHHHHHHHHhcCC--CCcEEEEEe--cCCCCCceeeeecccccccCCceeeeCCEEEEEccCchhhcCC
Q 033078 8 AAEKIGPAVRRQAVTVRHLLQQRQ--RPYLKLGVK--ARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIG 83 (128)
Q Consensus 8 ~~~~IT~~A~~~~~~ik~ll~~~~--~~~IRI~v~--~~GC~G~~y~l~l~~~~~e~D~v~~~~Gi~~~id~~~~~~L~g 83 (128)
..|+|||+|+++ |++++++++ +.+|||+|+ ++| |++|+|.++++ .++|.+++.+|++|+||+.+++||+|
T Consensus 21 m~ItiT~~Aa~~---ik~ll~~~~~~~~~LRv~V~~~~gG--G~~Y~l~l~~~-~~~D~v~e~~Gv~v~VD~~s~~~L~G 94 (125)
T 2k4z_A 21 MMFKLTPAAAEQ---VLKAAKQGGTEGMCLRLAAGRNPDG--SIDYRMGFDDL-TEDDIRLTSEGVEIVIAPDYVSLLDQ 94 (125)
T ss_dssp SCEEECHHHHHH---HHHHHHHSSSTTCEEEEEEEECTTS--CEEEEEEEECC-CSSSCEEECSSCEEECCTTTHHHHTT
T ss_pred CEEEECHHHHHH---HHHHHhhCCCCCceEEEEEEecCCC--CEEEEEEecCC-CCCceEEEECCEEEEEeHHHHHhhCC
Confidence 468999999999 999998775 368999999 888 99999999987 88999999999999999999999999
Q ss_pred cEEEeee-CCCCceEEEeCCCCCCCCC
Q 033078 84 TKMDFVD-DKLRSEFVFINPNSKGQCG 109 (128)
Q Consensus 84 ~~IDy~e-~~~g~gF~i~nP~~~~~Cg 109 (128)
++|||++ +..+.+|+|+|||+...|.
T Consensus 95 ~~IDy~~~~l~g~gF~~~NPna~~~~p 121 (125)
T 2k4z_A 95 TTLDYVELEPGQFHFIFLNPRDPTYRP 121 (125)
T ss_dssp EEEEEEEEETTEEEEEEECSSSCSSCC
T ss_pred CEEEEEeCCCCcCeEEECCCCCCccCC
Confidence 9999999 9999999999999998774
No 7
>2p2e_A Putative Fe-S biosynthesis protein; hypothetical protein, beta-barrel, 10399L structural genomics, protein structure initiative, PSI-2; 2.48A {Lactobacillus salivarius} SCOP: b.124.1.1
Probab=99.80 E-value=1.9e-20 Score=132.17 Aligned_cols=94 Identities=9% Similarity=0.139 Sum_probs=84.7
Q ss_pred hhcccCHhHHHHHHHHHHHHhcCCC-CcEEEEEecC-------CCCC-ceeeeeccccccc----CCceeeeCCEEEEEc
Q 033078 8 AAEKIGPAVRRQAVTVRHLLQQRQR-PYLKLGVKAR-------GCNG-LSYTLNYADERAK----FDELVEDKGVKILID 74 (128)
Q Consensus 8 ~~~~IT~~A~~~~~~ik~ll~~~~~-~~IRI~v~~~-------GC~G-~~y~l~l~~~~~e----~D~v~~~~Gi~~~id 74 (128)
-.|.|||+|+++ |+++++.++. ..||+. +++ ||+| ..|.|.+++++.+ +|.+++.+|++|+||
T Consensus 3 M~ItlT~~A~~~---l~~~l~~~~~~l~Lr~~-dg~g~y~k~ggCsg~~~Y~l~~v~~~~~~~~~~D~~~e~~g~~v~vd 78 (128)
T 2p2e_A 3 LKITVTDDAAKK---LQRYTDDSNAVLLLDFD-DGVGALSKVGVCSLNSDFRILVVSKDMDYKKDYNEVIDSNIGKFYYK 78 (128)
T ss_dssp CEEEECHHHHHH---HHHHHTCTTEEEEEEEC-SSCSGGGGSSCCCCSCCEEEEEEETTSSCTTTSCEEEEETTSCEEEC
T ss_pred cEEEECHHHHHH---HHHHHhcCCceEEEEEe-CCCCccccCCCCCCCCEEEEEEeccCCCCCCCCCEEEEeCCEEEEEC
Confidence 358999999999 9999987755 579998 555 7999 6999999988877 899999999999999
Q ss_pred cCchhhcCC-cEEEeeeCC----CCce-EEEeCCCCC
Q 033078 75 PKALMHVIG-TKMDFVDDK----LRSE-FVFINPNSK 105 (128)
Q Consensus 75 ~~~~~~L~g-~~IDy~e~~----~g~g-F~i~nP~~~ 105 (128)
+.++.||+| ++|||+++. .+++ |.|.|||+.
T Consensus 79 ~~s~~~ldgg~~iDy~~~~~~l~L~s~~f~~~NPN~~ 115 (128)
T 2p2e_A 79 GYSKMYMDDNMKISLNTNNSLLRLTGDNSGELMPALS 115 (128)
T ss_dssp GGGGGGSCSEEEEEECSSSSCEEEEETTTEEEEEEEC
T ss_pred cchHHhhCCCeEEEEeCCCceEEecCCccEEECCCCe
Confidence 999999996 999999998 8899 999999986
No 8
>2qgo_A Putative Fe-S biosynthesis protein; PSI-2, NYSGXRC, 10399G, Fe-S cluster protein, structural GEN protein structure initiative; 2.04A {Lactobacillus acidophilus}
Probab=99.76 E-value=1.5e-19 Score=129.51 Aligned_cols=89 Identities=12% Similarity=0.145 Sum_probs=72.5
Q ss_pred hhcccCHhHHHHHHHHHHHHhcCCCCcE-------EEEEecCCCC-CceeeeecccccccC-CceeeeC-CEEEEEccCc
Q 033078 8 AAEKIGPAVRRQAVTVRHLLQQRQRPYL-------KLGVKARGCN-GLSYTLNYADERAKF-DELVEDK-GVKILIDPKA 77 (128)
Q Consensus 8 ~~~~IT~~A~~~~~~ik~ll~~~~~~~I-------RI~v~~~GC~-G~~y~l~l~~~~~e~-D~v~~~~-Gi~~~id~~~ 77 (128)
-.++|||+|+++ |+++++.++...| |+.++++||+ |++|.|.+++++.++ |.+++.+ |++|+||+.+
T Consensus 4 M~ItlTd~Aa~~---ik~~l~~~~~l~L~~~Dgv~r~~v~gGGCSiG~~Y~l~~~~e~~~dyD~~~e~~gGv~v~Vd~~s 80 (141)
T 2qgo_A 4 LNIKFTDNAVDY---LKRREILDKILILITDDGGGKYSIQGGSCSMGAHFSIIWLDKVDPDYPVKIANEQNVKIYTSDFD 80 (141)
T ss_dssp CBEEECHHHHHH---HHHTTCTTSEEEEEECSSCSTTCC---------CEEEEEESSCCTTCCEECBCSSCCEEEECHHH
T ss_pred eEEEECHHHHHH---HHHHHhhccceeeecCCCceEEEEeCccCCCCCEEEEEEeecCCCCCCEEEEeCCCEEEEECchH
Confidence 358999999999 9999987755578 9999999999 999999999888899 9999999 5999999999
Q ss_pred hhhcC-CcEEEeeeCCCCceEEEeCCC
Q 033078 78 LMHVI-GTKMDFVDDKLRSEFVFINPN 103 (128)
Q Consensus 78 ~~~L~-g~~IDy~e~~~g~gF~i~nP~ 103 (128)
++||+ |++|||+++ .|.+++|.
T Consensus 81 l~yLd~G~~IDy~~~----~l~Lks~s 103 (141)
T 2qgo_A 81 KTMLGPNMVMDYNAG----SLSLSSDE 103 (141)
T ss_dssp HTTSCSSEEEEEETT----EEEEEETT
T ss_pred HHHhcCCCEEeEECC----EEEEcCCC
Confidence 99999 999999964 78888764
No 9
>1fiw_L Beta-acrosin light chain; anti-parallel beta-barrel, hydrolase; HET: NAG FUL BMA MAN PBZ; 2.10A {Ovis aries} SCOP: b.47.1.2
Probab=40.53 E-value=13 Score=18.44 Aligned_cols=19 Identities=21% Similarity=0.436 Sum_probs=15.7
Q ss_pred CCCCCcCcCCCCCcccCCC
Q 033078 109 GCGESFMTTSSSGASKQGG 127 (128)
Q Consensus 109 gCG~sf~~~~~~~~~~~~~ 127 (128)
.||-.|+-+++.+.|--||
T Consensus 8 pCGlrfrqn~q~~~rivGG 26 (26)
T 1fiw_L 8 PCGVRFRQNRQGGVRXXXX 26 (26)
T ss_pred ccCceeccCccccccccCC
Confidence 4999999999888887665
No 10
>2hgo_A CASSIICOLIN; toxin, disulfide bridge, glycoprotein; HET: PCA 3HD; NMR {Corynespora cassiicola}
Probab=36.50 E-value=5.9 Score=19.55 Aligned_cols=11 Identities=45% Similarity=1.229 Sum_probs=7.3
Q ss_pred CCC--CCCCcCcC
Q 033078 107 QCG--CGESFMTT 117 (128)
Q Consensus 107 ~Cg--CG~sf~~~ 117 (128)
-|| ||.|+..+
T Consensus 13 fcgdncgnswacs 25 (27)
T 2hgo_A 13 FCGDNCGNSWACS 25 (27)
T ss_dssp EEECSSSCEEECS
T ss_pred cccCCcCCccccc
Confidence 365 88887654
No 11
>1xrx_A SEQA protein; protein filament, LEFT-handed helix, DNA replication inhibit replication inhibitor; 2.15A {Escherichia coli} SCOP: a.43.1.7
Probab=33.25 E-value=19 Score=20.55 Aligned_cols=26 Identities=23% Similarity=0.457 Sum_probs=21.6
Q ss_pred hhhhhhhcccCHhHHHHHHHHHHHHhcCC
Q 033078 3 SFLAQAAEKIGPAVRRQAVTVRHLLQQRQ 31 (128)
Q Consensus 3 ~~~~~~~~~IT~~A~~~~~~ik~ll~~~~ 31 (128)
.+|++-+..|-|.|..- |+++|+...
T Consensus 12 ~YIas~t~~igEsaSdi---LRRll~l~~ 37 (50)
T 1xrx_A 12 SYIASHTKHIGESASDI---LRRMLKFSA 37 (50)
T ss_dssp HHHHTTCSSTTCCHHHH---HHHHHTC--
T ss_pred HHHHHhchhhccCHHHH---HHHHHcCCc
Confidence 57999999999999999 888887653
No 12
>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=26.63 E-value=28 Score=15.85 Aligned_cols=11 Identities=27% Similarity=1.047 Sum_probs=8.4
Q ss_pred CCC---CCCCcCcC
Q 033078 107 QCG---CGESFMTT 117 (128)
Q Consensus 107 ~Cg---CG~sf~~~ 117 (128)
.|. ||.+|...
T Consensus 5 ~C~~~~C~k~f~~~ 18 (32)
T 1zfd_A 5 SCDHPGCDKAFVRN 18 (32)
T ss_dssp CCCCTTCCCCBSSS
T ss_pred cCcCCCCCCccCCH
Confidence 584 99999754
No 13
>4es1_A BH0342 protein; ferredoxin, nuclease, hydrolase; 1.10A {Bacillus halodurans} PDB: 4es2_A 4es3_A
Probab=25.67 E-value=1.2e+02 Score=19.37 Aligned_cols=33 Identities=6% Similarity=0.048 Sum_probs=22.8
Q ss_pred cccCHhHHHHHHHHHHHHhc---CCCCcEEEEEecCCCC
Q 033078 10 EKIGPAVRRQAVTVRHLLQQ---RQRPYLKLGVKARGCN 45 (128)
Q Consensus 10 ~~IT~~A~~~~~~ik~ll~~---~~~~~IRI~v~~~GC~ 45 (128)
+.||++-.++ |+..|.. .+.+.|||+.-...|-
T Consensus 45 ~~lt~~~~~~---L~~~l~~~id~~~Dsv~iy~l~~~~~ 80 (100)
T 4es1_A 45 CIVDSTQLTS---LKLELTSLIDEEKDSLRIYRLGNNYK 80 (100)
T ss_dssp EEECHHHHHH---HHHHHHHHSCTTTCEEEEEEECCCSS
T ss_pred EEcCHHHHHH---HHHHHHhhcCCCCCEEEEEEcCCCcc
Confidence 5788887777 6655543 2457899998777664
No 14
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Probab=23.39 E-value=30 Score=16.37 Aligned_cols=11 Identities=45% Similarity=1.020 Sum_probs=8.1
Q ss_pred CCC-CCCCcCcC
Q 033078 107 QCG-CGESFMTT 117 (128)
Q Consensus 107 ~Cg-CG~sf~~~ 117 (128)
.|. ||.+|...
T Consensus 13 ~C~~C~k~f~~~ 24 (37)
T 1p7a_A 13 QCPDCDRSFSRS 24 (37)
T ss_dssp CCTTTCCCBSSH
T ss_pred cCCCCCcccCcH
Confidence 565 99999753
No 15
>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=22.33 E-value=27 Score=18.09 Aligned_cols=13 Identities=31% Similarity=0.795 Sum_probs=9.8
Q ss_pred CCC---CCCCCcCcCC
Q 033078 106 GQC---GCGESFMTTS 118 (128)
Q Consensus 106 ~~C---gCG~sf~~~~ 118 (128)
..| .||.+|..+.
T Consensus 19 ~~C~~~~C~k~F~~~~ 34 (47)
T 1ncs_A 19 FECLFPGCTKTFKRRY 34 (47)
T ss_dssp EECCCTTCCCEECSSS
T ss_pred eECCCCCCCCccCCHH
Confidence 468 5999998654
No 16
>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A
Probab=21.81 E-value=30 Score=15.65 Aligned_cols=11 Identities=36% Similarity=1.008 Sum_probs=8.3
Q ss_pred CC---CCCCCcCcC
Q 033078 107 QC---GCGESFMTT 117 (128)
Q Consensus 107 ~C---gCG~sf~~~ 117 (128)
.| .||.+|...
T Consensus 4 ~C~~~~C~k~f~~~ 17 (31)
T 1sp2_A 4 MCTWSYCGKRFTRS 17 (31)
T ss_dssp BCCSTTCCCBCSSH
T ss_pred CCcCCCCCcccCCH
Confidence 57 599999753
No 17
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.27 E-value=55 Score=15.11 Aligned_cols=12 Identities=33% Similarity=0.977 Sum_probs=8.6
Q ss_pred CCCC-CCCCcCcC
Q 033078 106 GQCG-CGESFMTT 117 (128)
Q Consensus 106 ~~Cg-CG~sf~~~ 117 (128)
..|. ||.+|...
T Consensus 10 ~~C~~C~k~f~~~ 22 (36)
T 2elr_A 10 HLCDMCGKKFKSK 22 (36)
T ss_dssp CBCTTTCCBCSSH
T ss_pred eecCcCCCCcCch
Confidence 4575 99999753
Done!