BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 033081
         (128 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q8TE82|S3TC1_HUMAN SH3 domain and tetratricopeptide repeat-containing protein 1
           OS=Homo sapiens GN=SH3TC1 PE=1 SV=3
          Length = 1336

 Score = 30.4 bits (67), Expect = 3.3,   Method: Composition-based stats.
 Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 2/49 (4%)

Query: 53  SESKPENRSESDLEAKSSRSSRFSPGCFTEEKAKQL--RLMTKDTASFH 99
           S   P +  ES +       S FS GCF+EE A+QL  R+   D  S +
Sbjct: 364 SMQGPVSELESAIFLNEEEKSFFSEGCFSEEDARQLLRRMSGTDVCSVY 412


>sp|Q98CM3|SAHH_RHILO Adenosylhomocysteinase OS=Rhizobium loti (strain MAFF303099)
           GN=ahcY PE=3 SV=1
          Length = 466

 Score = 30.0 bits (66), Expect = 4.1,   Method: Composition-based stats.
 Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 2/64 (3%)

Query: 41  LFGWSSEADYIDSESKPENRSESDLEAKSSRSSRFSPGCFTEEKAKQLRLMTKDTASFHD 100
           L G  +EA   D  S P++  E    A+  +  + SPG FT++KA  +R +T++T +  +
Sbjct: 141 LIGARAEAGE-DVLSNPQSEEEEYFYAQVKKRLKASPGFFTKQKAA-IRGVTEETTTGVN 198

Query: 101 AMYH 104
            +Y 
Sbjct: 199 RLYQ 202


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.312    0.124    0.369 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,236,662
Number of Sequences: 539616
Number of extensions: 1538989
Number of successful extensions: 3360
Number of sequences better than 100.0: 16
Number of HSP's better than 100.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 3347
Number of HSP's gapped (non-prelim): 21
length of query: 128
length of database: 191,569,459
effective HSP length: 94
effective length of query: 34
effective length of database: 140,845,555
effective search space: 4788748870
effective search space used: 4788748870
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 55 (25.8 bits)