BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>033093
MAKAAATSLFQNLRRFIKKPWEITGVCSDPEYMGPLRKAAEYRVRCPATPEQQAIIPTSN
PETVYDIKYYSRDQRRNRPPIRRTILKKADVEKMMKEKTFDVTDFPPVFLTGAVEEDINA
VGGGYQK

High Scoring Gene Products

Symbol, full name Information P value
AT5G08060 protein from Arabidopsis thaliana 2.9e-32

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  033093
        (127 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2142868 - symbol:AT5G08060 "AT5G08060" species...   353  2.9e-32   1


>TAIR|locus:2142868 [details] [associations]
            symbol:AT5G08060 "AT5G08060" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0005739 "mitochondrion"
            evidence=IDA] GO:GO:0005739 EMBL:CP002688 EMBL:AL133421
            EMBL:AF370243 EMBL:AY062967 EMBL:AK118633 IPI:IPI00540392
            PIR:T45631 RefSeq:NP_196423.1 UniGene:At.639 STRING:Q9SD78
            PRIDE:Q9SD78 EnsemblPlants:AT5G08060.1 GeneID:830700
            KEGG:ath:AT5G08060 TAIR:At5g08060 InParanoid:Q9SD78 OMA:RRNRPPI
            PhylomeDB:Q9SD78 ProtClustDB:CLSN2687258 ArrayExpress:Q9SD78
            Genevestigator:Q9SD78 Uniprot:Q9SD78
        Length = 131

 Score = 353 (129.3 bits), Expect = 2.9e-32, P = 2.9e-32
 Identities = 70/131 (53%), Positives = 95/131 (72%)

Query:     1 MAKA---AATSLFQNLRRFIKKPWEITGVCSDPEYMGPLRKAAEYRVRCPATPEQQAIIP 57
             MAK+   AA+SL QNLRR+IKKPW+ITG C+ PEY+  + KA EYR+RCPAT +++AI+P
Sbjct:     1 MAKSVSTAASSLVQNLRRYIKKPWQITGPCAHPEYLEAVPKATEYRLRCPATIDEEAIVP 60

Query:    58 TSNPETVYDIKYYSXXXXXXXXXXXXTILKKADVEKMMKEK-TFDVTDFPPVFLTGAVEE 116
             +S+PETVY+I Y+              +L K +V +MM EK +FDV+DFP V+LT  VEE
Sbjct:    61 SSDPETVYNIVYHGRDQRRNRPPIRRYVLTKDNVVQMMNEKKSFDVSDFPKVYLTTTVEE 120

Query:   117 DINAVGGGYQK 127
             D++  GGGY+K
Sbjct:   121 DLDTRGGGYEK 131


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.317   0.133   0.396    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      127       115   0.00091  102 3  11 22  0.50    30
                                                     29  0.45    32


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  558 (59 KB)
  Total size of DFA:  119 KB (2078 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  11.70u 0.10s 11.80t   Elapsed:  00:00:00
  Total cpu time:  11.70u 0.10s 11.80t   Elapsed:  00:00:00
  Start:  Fri May 10 14:04:05 2013   End:  Fri May 10 14:04:05 2013

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