Query 033095
Match_columns 127
No_of_seqs 198 out of 1138
Neff 9.1
Searched_HMMs 29240
Date Mon Mar 25 15:57:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033095.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/033095hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1gp6_A Leucoanthocyanidin diox 100.0 3.2E-32 1.1E-36 201.1 11.9 126 1-126 52-181 (356)
2 3oox_A Putative 2OG-Fe(II) oxy 100.0 4.2E-30 1.4E-34 186.9 12.7 117 10-126 19-143 (312)
3 1w9y_A 1-aminocyclopropane-1-c 100.0 8.3E-30 2.8E-34 185.8 7.6 111 9-126 16-126 (319)
4 1dcs_A Deacetoxycephalosporin 100.0 3.4E-29 1.2E-33 182.1 8.3 103 16-126 21-131 (311)
5 1odm_A Isopenicillin N synthas 100.0 4E-28 1.4E-32 177.8 12.2 118 1-126 14-154 (331)
6 3on7_A Oxidoreductase, iron/as 99.9 5E-27 1.7E-31 168.5 9.8 103 12-126 13-118 (280)
7 4ay7_A Methylcobalamin\: coenz 83.1 3.7 0.00013 29.5 6.4 39 13-51 306-348 (348)
8 1m5a_B Insulin B chain; alpha 72.1 5.2 0.00018 18.4 2.8 19 11-29 9-27 (30)
9 3m0z_A Putative aldolase; MCSG 64.4 14 0.00048 25.5 4.9 41 7-48 169-210 (249)
10 3m6y_A 4-hydroxy-2-oxoglutarat 61.7 16 0.00054 25.5 4.8 40 7-47 192-232 (275)
11 4f3y_A DHPR, dihydrodipicolina 58.3 9.9 0.00034 26.6 3.5 40 12-51 110-149 (272)
12 2rdq_A 1-deoxypentalenic acid 57.3 20 0.00067 24.6 4.9 36 15-51 22-57 (288)
13 3qy9_A DHPR, dihydrodipicolina 56.1 12 0.0004 25.8 3.5 41 11-51 88-128 (243)
14 3ijp_A DHPR, dihydrodipicolina 55.7 13 0.00044 26.3 3.7 40 12-51 125-164 (288)
15 2do1_A Nuclear protein HCC-1; 55.4 20 0.00067 18.8 3.6 34 11-47 12-45 (55)
16 2opw_A Phyhd1 protein; double- 48.4 30 0.001 23.7 4.7 36 16-52 7-42 (291)
17 4f21_A Carboxylesterase/phosph 48.3 51 0.0017 22.1 5.8 40 12-51 200-245 (246)
18 3jsy_A Acidic ribosomal protei 46.4 44 0.0015 22.4 5.1 39 10-48 5-44 (213)
19 1zav_A 50S ribosomal protein L 46.1 58 0.002 21.1 5.7 39 11-49 9-48 (180)
20 2j01_J 50S ribosomal protein L 44.7 60 0.0021 20.8 5.6 38 11-48 7-46 (173)
21 2a1x_A Phytanoyl-COA dioxygena 40.4 40 0.0014 23.4 4.3 35 16-51 26-60 (308)
22 1dih_A Dihydrodipicolinate red 37.8 34 0.0012 23.7 3.6 40 12-51 109-148 (273)
23 3emr_A ECTD; double stranded b 37.5 55 0.0019 23.0 4.7 35 16-51 38-72 (310)
24 3o2g_A Gamma-butyrobetaine dio 37.2 47 0.0016 24.2 4.4 39 11-52 135-173 (388)
25 3iz5_s 60S acidic ribosomal pr 36.1 77 0.0026 22.7 5.3 39 10-48 11-50 (319)
26 1oih_A Putative alkylsulfatase 35.8 69 0.0023 22.2 5.0 39 11-52 39-78 (301)
27 1otj_A Alpha-ketoglutarate-dep 35.7 76 0.0026 21.7 5.2 38 11-51 29-66 (283)
28 3dd7_B PHD, prevent HOST death 34.3 32 0.0011 14.7 2.2 20 108-127 4-23 (23)
29 3u5i_q A0, L10E, 60S acidic ri 32.6 77 0.0026 22.6 4.8 39 10-48 8-47 (312)
30 4exq_A UPD, URO-D, uroporphyri 32.1 1E+02 0.0035 22.3 5.5 38 12-49 316-358 (368)
31 3ugs_B Undecaprenyl pyrophosph 31.5 1E+02 0.0034 21.0 5.0 41 11-51 36-83 (225)
32 1h1j_S THO1 protein; SAP domai 31.5 57 0.0019 16.7 3.6 31 12-45 8-38 (51)
33 1vm6_A DHPR, dihydrodipicolina 31.0 52 0.0018 22.5 3.5 39 12-50 90-128 (228)
34 2rnn_A E3 SUMO-protein ligase 30.7 69 0.0024 19.4 3.7 31 13-46 41-71 (114)
35 1nx8_A CARC, carbapenem syntha 30.6 84 0.0029 21.3 4.7 35 14-51 29-63 (273)
36 4h8e_A Undecaprenyl pyrophosph 30.6 83 0.0028 21.9 4.5 40 12-51 55-101 (256)
37 3kz5_E Protein SOPB; partition 30.1 61 0.0021 16.7 3.7 23 27-49 25-47 (52)
38 3rcm_A TATD family hydrolase; 29.4 1.3E+02 0.0043 20.9 5.5 36 14-49 19-54 (287)
39 1zrj_A E1B-55KDA-associated pr 29.2 62 0.0021 16.4 3.2 32 11-45 12-43 (50)
40 1v7z_A Creatininase, creatinin 29.1 99 0.0034 21.2 4.8 34 11-44 96-132 (260)
41 1zei_A Insulin, B28Asp-X-MCR; 29.0 61 0.0021 16.7 2.8 19 11-29 9-27 (53)
42 2fk5_A Fuculose-1-phosphate al 28.8 36 0.0012 22.4 2.4 23 12-34 131-153 (200)
43 1r3s_A URO-D, uroporphyrinogen 28.7 1.3E+02 0.0043 21.6 5.5 37 13-49 320-360 (367)
44 2kvu_A MKL/myocardin-like prot 28.3 82 0.0028 17.6 3.5 32 11-45 28-59 (75)
45 2hbt_A EGL nine homolog 1; pro 28.3 1.3E+02 0.0043 20.5 5.2 35 14-49 16-50 (247)
46 2fct_A Syringomycin biosynthes 28.1 1.1E+02 0.0039 21.0 5.1 34 16-50 13-46 (313)
47 3vk5_A MOEO5; TIM barrel, tran 28.0 1.6E+02 0.0055 20.8 6.3 45 12-57 54-102 (286)
48 2wfu_B Probable insulin-like p 27.7 27 0.00093 15.3 1.1 14 12-26 9-22 (26)
49 2k9l_A RNA polymerase sigma fa 27.5 53 0.0018 18.0 2.6 37 12-48 32-74 (76)
50 3a1y_G Acidic ribosomal protei 27.4 1E+02 0.0035 21.5 4.7 39 10-48 8-47 (284)
51 2kqp_A Insulin; carbohydrate m 27.4 30 0.001 19.7 1.6 20 11-30 9-28 (86)
52 2irp_A Putative aldolase class 27.2 36 0.0012 22.4 2.2 23 12-34 151-176 (208)
53 3j21_k Acidic ribosomal protei 27.0 83 0.0028 22.7 4.2 39 10-48 8-47 (339)
54 1p9l_A Dihydrodipicolinate red 26.3 62 0.0021 22.1 3.3 39 12-50 82-123 (245)
55 3lxr_F IPGB2; RHOA, GTPase, GE 26.0 68 0.0023 21.2 3.2 41 13-59 78-119 (192)
56 2ivy_A Hypothetical protein SS 25.9 65 0.0022 18.8 2.9 40 11-50 14-57 (101)
57 2qh9_A UPF0215 protein AF_1433 25.6 54 0.0019 21.4 2.8 39 23-61 132-170 (184)
58 4h0c_A Phospholipase/carboxyle 25.0 1.4E+02 0.0048 19.1 4.9 33 12-44 168-206 (210)
59 3ds4_A HIV-1 capsid protein; H 24.5 32 0.0011 19.6 1.3 13 13-25 65-77 (86)
60 2opi_A L-fuculose-1-phosphate 24.4 31 0.0011 22.8 1.5 23 12-34 138-160 (212)
61 3r1j_A Alpha-ketoglutarate-dep 24.4 1.7E+02 0.0058 20.4 5.4 39 11-52 33-72 (301)
62 3mwd_B ATP-citrate synthase; A 24.4 1.2E+02 0.0042 21.7 4.7 37 12-48 91-129 (334)
63 1pvt_A Sugar-phosphate aldolas 23.9 41 0.0014 22.7 2.0 23 12-34 174-196 (238)
64 1jjr_A KU70, thyroid autoantig 23.8 93 0.0032 19.8 3.5 30 13-45 65-94 (151)
65 3exc_X Uncharacterized protein 23.6 85 0.0029 17.9 3.1 37 14-50 18-58 (91)
66 3ipw_A Hydrolase TATD family p 23.6 1.8E+02 0.0062 20.7 5.5 36 14-49 54-89 (325)
67 1sed_A APC1180, hypothetical p 23.1 36 0.0012 20.7 1.4 30 28-57 34-63 (117)
68 1j93_A UROD, uroporphyrinogen 22.8 1.1E+02 0.0036 21.8 4.1 36 14-49 312-351 (353)
69 3pvj_A Alpha-ketoglutarate-dep 22.3 1.5E+02 0.0052 20.3 4.8 39 11-52 27-65 (277)
70 4fhz_A Phospholipase/carboxyle 22.2 1.9E+02 0.0065 19.7 5.3 42 12-55 222-269 (285)
71 3e2v_A 3'-5'-exonuclease; stru 22.1 1.9E+02 0.0066 21.3 5.5 37 13-49 39-75 (401)
72 3no4_A Creatininase, creatinin 21.5 1.8E+02 0.0063 20.1 5.0 36 11-46 105-143 (267)
73 2v9l_A Rhamnulose-1-phosphate 21.4 48 0.0016 23.0 2.0 23 12-34 192-214 (274)
74 1e4c_P L-fuculose 1-phosphate 20.8 41 0.0014 22.3 1.5 23 12-34 135-157 (215)
75 1efe_A Mini-proinsulin, M2PI; 20.5 42 0.0014 17.8 1.2 19 11-29 9-27 (60)
76 3ocr_A Class II aldolase/adduc 20.4 52 0.0018 22.9 2.0 23 12-34 170-192 (273)
77 2z7b_A MLR6791 protein; class 20.3 52 0.0018 22.8 2.0 23 12-34 179-201 (270)
78 2lm0_A AF4/FMR2 family member 20.2 23 0.0008 21.8 0.1 24 13-36 79-102 (125)
No 1
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A*
Probab=99.98 E-value=3.2e-32 Score=201.14 Aligned_cols=126 Identities=26% Similarity=0.537 Sum_probs=106.7
Q ss_pred CCCccCcc--chHHHHHHHHHHHHhcceeEEecCCCCHHHHHHHHHHHHHHhcCCHHHHhhhccCC--CCcccccccccc
Q 033095 1 MQSLLYEE--SMDSELAKLDFACKEWGFFQLVNHGVISAFLEKVKKKVKGFFNLSMEEKKKYWQHP--GDVEGFGQAFVV 76 (127)
Q Consensus 1 ~~~l~~~~--~r~~~~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~fF~lp~eeK~~~~~~~--~~~~GY~~~~~~ 76 (127)
|+.|.+++ .|.+++++|.+||++||||||+|||||.++++++++.+++||+||.|+|+++.... ..++||+.....
T Consensus 52 ls~l~~~~~~~~~~~~~~l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~~Gy~~~~~~ 131 (356)
T 1gp6_A 52 LKNIESDDEKIRENCIEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLAN 131 (356)
T ss_dssp CTTTTCSCHHHHHHHHHHHHHHHHHTSEEEEESCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSEEECCCCC
T ss_pred chhccCCChHHHHHHHHHHHHHHHhCCEEEEeCCCCCHHHHHHHHHHHHHHHCCCHHHHHhhcccccccCccccCcCccc
Confidence 35565554 25677888999999999999999999999999999999999999999999997654 357899877655
Q ss_pred CccccccccccccccccCCCCCCCCCCCCCCcchHHHHHHHHHHHHhhhh
Q 033095 77 SEEQKLDWAGIFSMITLPVHQRKPHLFPKLPPSLRFSLFVLDMDLQAKSE 126 (127)
Q Consensus 77 ~~~~~~d~~E~~~~~~~p~~~~~~~~wP~~~~~fr~~~~~y~~~~~~la~ 126 (127)
...+..||+|+|+++..|.....+|.||+.+|+||+++++|+++|.+|+.
T Consensus 132 ~~~~~~d~kE~~~~~~~p~~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~ 181 (356)
T 1gp6_A 132 NASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLAT 181 (356)
T ss_dssp STTCCCCSCEEEEEEEESGGGCCGGGSCCSSTTHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCChhheeeeecCCccccccccCCCcchhhhHHHHHHHHHHHHHHH
Confidence 55667899999998866643346789999999999999999999999985
No 2
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15}
Probab=99.97 E-value=4.2e-30 Score=186.94 Aligned_cols=117 Identities=20% Similarity=0.267 Sum_probs=98.6
Q ss_pred hHHHHHHHHHHHHhcceeEEecCCCCHHHHHHHHHHHHHHhcCCHHHHhhhccCCCCccccccccccC--cccccccccc
Q 033095 10 MDSELAKLDFACKEWGFFQLVNHGVISAFLEKVKKKVKGFFNLSMEEKKKYWQHPGDVEGFGQAFVVS--EEQKLDWAGI 87 (127)
Q Consensus 10 r~~~~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~fF~lp~eeK~~~~~~~~~~~GY~~~~~~~--~~~~~d~~E~ 87 (127)
|.+++++|.+||++||||||+|||||.++++++++.+++||+||.|+|+++...+..++||.+.+.+. .....||+|+
T Consensus 19 ~~~~~~~l~~A~~~~GFf~v~nHGi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~Gy~~~g~e~~~~~~~~D~kE~ 98 (312)
T 3oox_A 19 FTRFAQELGASFERYGFAVLSDYDLDQARIDAAVDSAKAFFALPVETKKQYAGVKGGARGYIPFGVETAKGADHYDLKEF 98 (312)
T ss_dssp HHHHHHHHHHHHHHHSEEEEESCCSCHHHHHHHHHHHHHHHTSCHHHHGGGBSSGGGTSEEECCCCCCSTTSCSCCCCEE
T ss_pred HHHHHHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHhhhccCCCCccccccccceecCCCCCCCceee
Confidence 56778889999999999999999999999999999999999999999999876544578998766432 3356899999
Q ss_pred cccccc-CC-----CCCCCCCCCCCCcchHHHHHHHHHHHHhhhh
Q 033095 88 FSMITL-PV-----HQRKPHLFPKLPPSLRFSLFVLDMDLQAKSE 126 (127)
Q Consensus 88 ~~~~~~-p~-----~~~~~~~wP~~~~~fr~~~~~y~~~~~~la~ 126 (127)
|+++.. +. ....+|.||+.+|+||+++++|+++|.+|+.
T Consensus 99 ~~~~~~~~~~~~~~~~~~~n~wP~~~p~fr~~~~~y~~~~~~l~~ 143 (312)
T 3oox_A 99 WHMGRDLPPGHRFRAHMADNVWPAEIPAFKHDVSWLYNSLDGMGG 143 (312)
T ss_dssp EEECCCCCTTCGGGGTSCCCCCCTTSTTHHHHHHHHHHHHHHHHH
T ss_pred eEeecCCCcCCcchhccCCCCCCCcCHHHHHHHHHHHHHHHHHHH
Confidence 988642 11 1235799999999999999999999999985
No 3
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X
Probab=99.96 E-value=8.3e-30 Score=185.83 Aligned_cols=111 Identities=25% Similarity=0.466 Sum_probs=95.6
Q ss_pred chHHHHHHHHHHHHhcceeEEecCCCCHHHHHHHHHHHHHHhcCCHHHHhhhccCCCCccccccccccCccccccccccc
Q 033095 9 SMDSELAKLDFACKEWGFFQLVNHGVISAFLEKVKKKVKGFFNLSMEEKKKYWQHPGDVEGFGQAFVVSEEQKLDWAGIF 88 (127)
Q Consensus 9 ~r~~~~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~fF~lp~eeK~~~~~~~~~~~GY~~~~~~~~~~~~d~~E~~ 88 (127)
.|.+++++|.+||++||||||+|||||.++++++++.+++||+||.|+|+++... .+||.....+ .+..||+|.|
T Consensus 16 ~~~~~~~~l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~~FF~lP~e~K~~~~~~---~~Gy~~~~~e--~~~~d~ke~~ 90 (319)
T 1w9y_A 16 ERAATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCMEQRFKELVA---SKALEGVQAE--VTDMDWESTF 90 (319)
T ss_dssp THHHHHHHHHHHHHHTSEEEEESCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHTTCCCC--GGGCCCCEEE
T ss_pred cHHHHHHHHHHHHHhCCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHhhhccC---CCCCCccccc--CCCCChhhhe
Confidence 3667888999999999999999999999999999999999999999999998643 3588765422 3567999999
Q ss_pred cccccCCCCCCCCCCCCCCcchHHHHHHHHHHHHhhhh
Q 033095 89 SMITLPVHQRKPHLFPKLPPSLRFSLFVLDMDLQAKSE 126 (127)
Q Consensus 89 ~~~~~p~~~~~~~~wP~~~~~fr~~~~~y~~~~~~la~ 126 (127)
.++..|. ..+|.||+.+|+||+++++|+++|.+|+.
T Consensus 91 ~~~~~p~--~~~~~wP~~~~~fr~~~~~y~~~~~~l~~ 126 (319)
T 1w9y_A 91 FLKHLPI--SNISEVPDLDEEYREVMRDFAKRLEKLAE 126 (319)
T ss_dssp EEEEESC--CGGGGCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred eeecCCc--ccccccccchhHHHHHHHHHHHHHHHHHH
Confidence 9886653 24788999999999999999999999985
No 4
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A*
Probab=99.96 E-value=3.4e-29 Score=182.08 Aligned_cols=103 Identities=20% Similarity=0.185 Sum_probs=84.6
Q ss_pred HHHHHHHhcceeEEecCCCCHHHHHHHHHHHHHHhcCC-HHHHhhhccCC-CCcccccccccc------Ccccccccccc
Q 033095 16 KLDFACKEWGFFQLVNHGVISAFLEKVKKKVKGFFNLS-MEEKKKYWQHP-GDVEGFGQAFVV------SEEQKLDWAGI 87 (127)
Q Consensus 16 ~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~fF~lp-~eeK~~~~~~~-~~~~GY~~~~~~------~~~~~~d~~E~ 87 (127)
+|.+||++||||||+|||||.++++++++++++||+|| .|+|+++.... ..++||.+.+.+ ...+..||+|+
T Consensus 21 ~l~~A~~~~GFf~l~nHGi~~~l~~~~~~~~~~fF~lP~~e~K~~~~~~~~~~~~Gy~~~~~e~~~~~~~~~~~~d~~E~ 100 (311)
T 1dcs_A 21 EFRRCLRDKGLFYLTDCGLTDTELKSAKDLVIDFFEHGSEAEKRAVTSPVPTMRRGFTGLESESTAQITNTGSYSDYSMC 100 (311)
T ss_dssp HHHHHHHHTCEEEEESSSCCHHHHHHHHHHHHHHHHHCCHHHHHHTBCSSCCSSSEEEEC-----------------CEE
T ss_pred HHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHcCCcHHHhHHhhccCCCCCCceeeccccccccccCCCCCCCccee
Confidence 89999999999999999999999999999999999999 99999997653 457999987643 23467899999
Q ss_pred ccccccCCCCCCCCCCCCCCcchHHHHHHHHHHHHhhhh
Q 033095 88 FSMITLPVHQRKPHLFPKLPPSLRFSLFVLDMDLQAKSE 126 (127)
Q Consensus 88 ~~~~~~p~~~~~~~~wP~~~~~fr~~~~~y~~~~~~la~ 126 (127)
|+++.. +|.|| +|+||+++++|+++|.+|+.
T Consensus 101 ~~~~~~------~n~wP--~~~fr~~~~~y~~~~~~l~~ 131 (311)
T 1dcs_A 101 YSMGTA------DNLFP--SGDFERIWTQYFDRQYTASR 131 (311)
T ss_dssp EEECSS------SCCCS--CHHHHHHHHHHHHHHHHHHH
T ss_pred eeccCC------CCCCC--ChHHHHHHHHHHHHHHHHHH
Confidence 998753 57899 89999999999999999985
No 5
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ...
Probab=99.95 E-value=4e-28 Score=177.76 Aligned_cols=118 Identities=18% Similarity=0.229 Sum_probs=95.9
Q ss_pred CCCccCcc--chHHHHHHHHHHHHhcceeEEecCCCCHHHHHHHHHHHHHH-hcCCHHHHhhhccCCCCccccccccccC
Q 033095 1 MQSLLYEE--SMDSELAKLDFACKEWGFFQLVNHGVISAFLEKVKKKVKGF-FNLSMEEKKKYWQHPGDVEGFGQAFVVS 77 (127)
Q Consensus 1 ~~~l~~~~--~r~~~~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~f-F~lp~eeK~~~~~~~~~~~GY~~~~~~~ 77 (127)
|+.|.+++ .|.+++++|.+||++||||||+|||| +++++++.+++| |+||.|+|+++.. +||.+.+.+.
T Consensus 14 ls~l~~~~~~~~~~~~~~l~~A~~~~GFf~v~nHGi---l~~~~~~~~~~F~F~lP~eeK~~~~~-----~Gy~~~~~e~ 85 (331)
T 1odm_A 14 VSPLFGDDQAAKMRVAQQIDAASRDTGFFYAVNHGI---NVQRLSQKTKEFHMSITPEEKWDLAI-----RAYNKEHQDQ 85 (331)
T ss_dssp CGGGGSSCHHHHHHHHHHHHHHHHTTSEEEEESCCC---CHHHHHHHHHHHHHHCCHHHHHHHBC-----TTTCTTCTTC
T ss_pred chHhcCCChHHHHHHHHHHHHHHHhCCEEEEEccce---eHHHHHHHHHhccCCCCHHHHHhhhh-----cCCCcCCccc
Confidence 35555555 35677888999999999999999999 999999999999 9999999999875 6787655321
Q ss_pred --c------cccccccccccccccCC----------CCCCCCCCCCC--CcchHHHHHHHHHHHHhhhh
Q 033095 78 --E------EQKLDWAGIFSMITLPV----------HQRKPHLFPKL--PPSLRFSLFVLDMDLQAKSE 126 (127)
Q Consensus 78 --~------~~~~d~~E~~~~~~~p~----------~~~~~~~wP~~--~~~fr~~~~~y~~~~~~la~ 126 (127)
. .+..||+|+|+++..+. ....+|.||+. +|+||+++++|+++|.+|+.
T Consensus 86 ~~~~~~~~~~~~~d~kE~~~~~~~~~~~~p~~~~~~~~~~~n~wP~~~~~p~fr~~~~~y~~~~~~l~~ 154 (331)
T 1odm_A 86 VRAGYYLSIPGKKAVESFCYLNPNFTPDHPRIQAKTPTHEVNVWPDETKHPGFQDFAEQYYWDVFGLSS 154 (331)
T ss_dssp SSSEEECCBTTTBCCEEEEECCTTCCTTSHHHHTTCTTCCCCCCCCTTTSTTHHHHHHHHHHHHHHHHH
T ss_pred cccccccccCCCCChhheEecccCCccccccccccccccCCCCCCCCCCChHHHHHHHHHHHHHHHHHH
Confidence 1 14679999999875321 02357999987 99999999999999999985
No 6
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis}
Probab=99.94 E-value=5e-27 Score=168.47 Aligned_cols=103 Identities=19% Similarity=0.273 Sum_probs=86.8
Q ss_pred HHHHHHHHHHHhcceeEEecCCCCHHHHHHHHHHHHHHhcCCHHHHhhhccCCCCcccccccc-cc--Cccccccccccc
Q 033095 12 SELAKLDFACKEWGFFQLVNHGVISAFLEKVKKKVKGFFNLSMEEKKKYWQHPGDVEGFGQAF-VV--SEEQKLDWAGIF 88 (127)
Q Consensus 12 ~~~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~fF~lp~eeK~~~~~~~~~~~GY~~~~-~~--~~~~~~d~~E~~ 88 (127)
..+++|.+||++||||||+|||||.++++++++.+++||+| ++|+++...+..++||.+.+ .+ ......||+|+|
T Consensus 13 ~~~~~l~~A~~~~GFF~v~nHGi~~~li~~~~~~~~~FF~l--e~K~k~~~~~~~~~GY~~~~~~e~~~~~~~~D~kE~~ 90 (280)
T 3on7_A 13 DSAKRFVESLRETGFGVLSNHPIDKELVERIYTEWQAFFNS--EAKNEFMFNRETHDGFFPASISETAKGHTVKDIKEYY 90 (280)
T ss_dssp THHHHHHHHHHHHSEEEEESCSSCHHHHHHHHHHHHHHHTS--GGGGGGBCCTTTCCEEECCC--------CCCCSCEEE
T ss_pred hHHHHHHHHHHhCCEEEEECCCCCHHHHHHHHHHHHHHhhh--HHHHHhccCCCCCCccccCccccccCCCCcccHHHHH
Confidence 35778999999999999999999999999999999999998 79999877656689998765 22 233467999999
Q ss_pred cccccCCCCCCCCCCCCCCcchHHHHHHHHHHHHhhhh
Q 033095 89 SMITLPVHQRKPHLFPKLPPSLRFSLFVLDMDLQAKSE 126 (127)
Q Consensus 89 ~~~~~p~~~~~~~~wP~~~~~fr~~~~~y~~~~~~la~ 126 (127)
++. +||..||+||+++++|+++|.+|++
T Consensus 91 ~~~----------p~~~~p~~fr~~~~~y~~~~~~l~~ 118 (280)
T 3on7_A 91 HVY----------PWGRIPDSLRANILAYYEKANTLAS 118 (280)
T ss_dssp EEC----------TTSCCCGGGHHHHHHHHHHHHHHHH
T ss_pred hcC----------CCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 863 2787889999999999999999986
No 7
>4ay7_A Methylcobalamin\: coenzyme M methyltransferase; TIM barrel; 1.80A {Methanosarcina mazei} PDB: 4ay8_A
Probab=83.12 E-value=3.7 Score=29.51 Aligned_cols=39 Identities=10% Similarity=-0.064 Sum_probs=30.8
Q ss_pred HHHHHHHHHHhcceeEEecCCCC----HHHHHHHHHHHHHHhc
Q 033095 13 ELAKLDFACKEWGFFQLVNHGVI----SAFLEKVKKKVKGFFN 51 (127)
Q Consensus 13 ~~~~l~~A~~~~GFf~l~nhGi~----~~~~~~~~~~~~~fF~ 51 (127)
..+++.+.++.-||..-.+|||+ .+-+..+.+++++|++
T Consensus 306 i~~~v~~~l~~~g~I~~~Ghgi~p~tp~env~a~v~av~ey~A 348 (348)
T 4ay7_A 306 IKAEAKEALEGGIDVLAPGCGIAPMTPLENVKALVAARDEFYA 348 (348)
T ss_dssp HHHHHHHHHHTTCSEEEESSSCCTTCCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHhCCCCEEeCCCccCCCCCHHHHHHHHHHHHHhcC
Confidence 33446777778888777789975 5789999999999985
No 8
>1m5a_B Insulin B chain; alpha helices, beta sheets, 3(10) helices, disulphide bridge hormone-growth factor complex; 1.20A {Sus scrofa} SCOP: g.1.1.1 PDB: 1aph_B 1b18_B 1b19_B 1b2a_B 1b2b_B 1b2c_B 1b2d_B 1b2e_B 1b2f_B 1b2g_B 1bph_B 1cph_B 1dph_B 1b17_B 1mpj_B 1wav_B 1zni_B 2a3g_B 2bn1_B 2bn3_B ...
Probab=72.14 E-value=5.2 Score=18.35 Aligned_cols=19 Identities=32% Similarity=0.566 Sum_probs=16.1
Q ss_pred HHHHHHHHHHHHhcceeEE
Q 033095 11 DSELAKLDFACKEWGFFQL 29 (127)
Q Consensus 11 ~~~~~~l~~A~~~~GFf~l 29 (127)
...+..|.-.|.+-|||+.
T Consensus 9 s~LVdaL~~vCgdRGF~~~ 27 (30)
T 1m5a_B 9 SHLVEALYLVCGERGFFYT 27 (30)
T ss_dssp HHHHHHHHHHHGGGCEEEC
T ss_pred HHHHHHHHHHhccCccccC
Confidence 4677889999999999984
No 9
>3m0z_A Putative aldolase; MCSG, PSI-2, structural genomics, protein structure initiative, midwest center for structural genomics, lyase; HET: MSE; 1.20A {Klebsiella pneumoniae subsp} PDB: 3nzr_A 3lm7_A
Probab=64.40 E-value=14 Score=25.48 Aligned_cols=41 Identities=17% Similarity=0.165 Sum_probs=31.4
Q ss_pred ccchHHHHHHHHHHHHhcceeEEe-cCCCCHHHHHHHHHHHHH
Q 033095 7 EESMDSELAKLDFACKEWGFFQLV-NHGVISAFLEKVKKKVKG 48 (127)
Q Consensus 7 ~~~r~~~~~~l~~A~~~~GFf~l~-nhGi~~~~~~~~~~~~~~ 48 (127)
|..+.++...+.+||.+.|| .+- --||+.+-+..+.+.+.+
T Consensus 169 Gl~~l~E~~avAka~a~~g~-~lEPTGGIdl~N~~~I~~i~l~ 210 (249)
T 3m0z_A 169 GLKHRAEFEAVAKACAAHDF-WLEPTGGIDLENYSEILKIALD 210 (249)
T ss_dssp TTTTHHHHHHHHHHHHHTTC-EEEEBSSCCTTTHHHHHHHHHH
T ss_pred CcccHHHHHHHHHHHHHcCc-eECCCCCccHhhHHHHHHHHHH
Confidence 34467889999999999999 555 457998888777776643
No 10
>3m6y_A 4-hydroxy-2-oxoglutarate aldolase; structural genomics, MCSG, lyase, PSI-2, protein structure initiative; HET: MSE; 1.45A {Bacillus cereus} PDB: 3n73_A 3mux_A
Probab=61.66 E-value=16 Score=25.55 Aligned_cols=40 Identities=23% Similarity=0.301 Sum_probs=30.8
Q ss_pred ccchHHHHHHHHHHHHhcceeEEe-cCCCCHHHHHHHHHHHH
Q 033095 7 EESMDSELAKLDFACKEWGFFQLV-NHGVISAFLEKVKKKVK 47 (127)
Q Consensus 7 ~~~r~~~~~~l~~A~~~~GFf~l~-nhGi~~~~~~~~~~~~~ 47 (127)
|..+.++...+.+||.+.|| .+- --||+.+-+..+.+.+.
T Consensus 192 Gl~~leEl~avAkAca~~g~-~lEPTGGIdl~Nf~~I~~i~l 232 (275)
T 3m6y_A 192 GLAHEEEYRAVAKACAEEGF-ALEPTGGIDKENFETIVRIAL 232 (275)
T ss_dssp TTTTHHHHHHHHHHHHHHTC-EEEEBSSCCTTTHHHHHHHHH
T ss_pred CcccHHHHHHHHHHHHHcCc-eECCCCCccHhHHHHHHHHHH
Confidence 34467889999999999999 554 45799888777777654
No 11
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=58.28 E-value=9.9 Score=26.59 Aligned_cols=40 Identities=18% Similarity=0.045 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHhcceeEEecCCCCHHHHHHHHHHHHHHhc
Q 033095 12 SELAKLDFACKEWGFFQLVNHGVISAFLEKVKKKVKGFFN 51 (127)
Q Consensus 12 ~~~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~fF~ 51 (127)
+..++|.++|++.+.++.-|-.+-..++.++.+.+.++|.
T Consensus 110 ~~~~~L~~aa~~~~vv~a~N~s~Gv~l~~~~~~~aa~~l~ 149 (272)
T 4f3y_A 110 PQKAQLRAAGEKIALVFSANMSVGVNVTMKLLEFAAKQFA 149 (272)
T ss_dssp HHHHHHHHHTTTSEEEECSCCCHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHhccCCEEEECCCCHHHHHHHHHHHHHHHhcC
Confidence 4467799999999999999999888899999998888884
No 12
>2rdq_A 1-deoxypentalenic acid 11-beta hydroxylase; Fe(II ketoglutarate dependent hydroxylase...; double stranded barrel helix, dioxygenase; HET: AKG; 1.31A {Streptomyces avermitilis} PDB: 2rdn_A* 2rdr_A* 2rds_A*
Probab=57.30 E-value=20 Score=24.62 Aligned_cols=36 Identities=22% Similarity=0.283 Sum_probs=30.1
Q ss_pred HHHHHHHHhcceeEEecCCCCHHHHHHHHHHHHHHhc
Q 033095 15 AKLDFACKEWGFFQLVNHGVISAFLEKVKKKVKGFFN 51 (127)
Q Consensus 15 ~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~fF~ 51 (127)
+++.+.+++.||+.|.|- ++.+.++++.+...+..+
T Consensus 22 ~~~~~~f~~dGyvvl~~~-l~~e~v~~l~~~~~~~~~ 57 (288)
T 2rdq_A 22 AALDSFYEEHGYLFLRNV-LDRDLVKTVAEQMREGLV 57 (288)
T ss_dssp HHHHHHHHHHSEEEECSC-SCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCEEEEeCC-CCHHHHHHHHHHHHHHHH
Confidence 457889999999999874 899999999988887753
No 13
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=56.07 E-value=12 Score=25.77 Aligned_cols=41 Identities=20% Similarity=0.135 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHHhcceeEEecCCCCHHHHHHHHHHHHHHhc
Q 033095 11 DSELAKLDFACKEWGFFQLVNHGVISAFLEKVKKKVKGFFN 51 (127)
Q Consensus 11 ~~~~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~fF~ 51 (127)
.+..++|.++|++.+.++--|-.|--.++.++.+.+.++|.
T Consensus 88 ~e~~~~l~~aa~~~~v~~a~N~S~Gv~l~~~~~~~aa~~l~ 128 (243)
T 3qy9_A 88 EKLLNKLDELSQNMPVFFSANMSYGVHALTKILAAAVPLLD 128 (243)
T ss_dssp HHHHHHHHHHTTTSEEEECSSCCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhcCCEEEECCccHHHHHHHHHHHHHHHhcC
Confidence 34567899999999999999999999999999998888874
No 14
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=55.72 E-value=13 Score=26.35 Aligned_cols=40 Identities=15% Similarity=0.066 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHhcceeEEecCCCCHHHHHHHHHHHHHHhc
Q 033095 12 SELAKLDFACKEWGFFQLVNHGVISAFLEKVKKKVKGFFN 51 (127)
Q Consensus 12 ~~~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~fF~ 51 (127)
+..++|.++|++.+.++.-|-.|--.++.++.+.+.++|.
T Consensus 125 e~~~~L~~aa~~~~~~~a~N~SiGv~ll~~l~~~aa~~l~ 164 (288)
T 3ijp_A 125 TEEAQIADFAKYTTIVKSGNMSLGVNLLANLVKRAAKALD 164 (288)
T ss_dssp HHHHHHHHHHTTSEEEECSCCCHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHhCcCCEEEECCCcHHHHHHHHHHHHHHHhcC
Confidence 3456799999999999999998888888888888888875
No 15
>2do1_A Nuclear protein HCC-1; SAP domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.140.2.1
Probab=55.45 E-value=20 Score=18.81 Aligned_cols=34 Identities=21% Similarity=0.451 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHHhcceeEEecCCCCHHHHHHHHHHHH
Q 033095 11 DSELAKLDFACKEWGFFQLVNHGVISAFLEKVKKKVK 47 (127)
Q Consensus 11 ~~~~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~ 47 (127)
.-.|++|.+.|+.+| +.-.|.-+++|+++.....
T Consensus 12 klkV~eLK~~L~~rG---L~~~G~KaeLieRL~~~l~ 45 (55)
T 2do1_A 12 KLKLAELKQECLARG---LETKGIKQDLIHRLQAYLE 45 (55)
T ss_dssp TSCHHHHHHHHHHHT---CCCCSCHHHHHHHHHHHHH
T ss_pred HCcHHHHHHHHHHcC---CCCCCcHHHHHHHHHHHHh
Confidence 345788999999999 3556778899998876543
No 16
>2opw_A Phyhd1 protein; double-stranded beta helix, oxygenase, structural GE structural genomics consortium, SGC, oxidoreductase; 1.90A {Homo sapiens} PDB: 3obz_A*
Probab=48.38 E-value=30 Score=23.72 Aligned_cols=36 Identities=8% Similarity=0.050 Sum_probs=30.4
Q ss_pred HHHHHHHhcceeEEecCCCCHHHHHHHHHHHHHHhcC
Q 033095 16 KLDFACKEWGFFQLVNHGVISAFLEKVKKKVKGFFNL 52 (127)
Q Consensus 16 ~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~fF~l 52 (127)
+..+.+++.||+.|.|- ++.+.++++.+...+..+.
T Consensus 7 e~~~~f~~dGyvvl~~~-l~~e~v~~l~~~~~~~~~~ 42 (291)
T 2opw_A 7 SQLQKFQQDGFLVLEGF-LSAEECVAMQQRIGEIVAE 42 (291)
T ss_dssp HHHHHHHHHSEEEETTS-SCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhCCEEEecCC-CCHHHHHHHHHHHHHHHhh
Confidence 46678999999999875 8999999999999888753
No 17
>4f21_A Carboxylesterase/phospholipase family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Francisella tularensis subsp}
Probab=48.32 E-value=51 Score=22.09 Aligned_cols=40 Identities=18% Similarity=0.202 Sum_probs=27.7
Q ss_pred HHHHHHHHHHHhcce---eEE---ecCCCCHHHHHHHHHHHHHHhc
Q 033095 12 SELAKLDFACKEWGF---FQL---VNHGVISAFLEKVKKKVKGFFN 51 (127)
Q Consensus 12 ~~~~~l~~A~~~~GF---f~l---~nhGi~~~~~~~~~~~~~~fF~ 51 (127)
+...++.+.+++.|+ |.. .+|+|+.+.++.+.+..++-|+
T Consensus 200 ~~~~~~~~~L~~~g~~v~~~~y~g~gH~i~~~~l~~~~~fL~k~l~ 245 (246)
T 4f21_A 200 VLGHDLSDKLKVSGFANEYKHYVGMQHSVCMEEIKDISNFIAKTFK 245 (246)
T ss_dssp HHHHHHHHHHHTTTCCEEEEEESSCCSSCCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHCCCCeEEEEECCCCCccCHHHHHHHHHHHHHHhC
Confidence 445567777787775 222 3799999988888776666554
No 18
>3jsy_A Acidic ribosomal protein P0 homolog; ribonucleoprotein; 1.60A {Methanocaldococcus jannaschii}
Probab=46.37 E-value=44 Score=22.39 Aligned_cols=39 Identities=18% Similarity=0.211 Sum_probs=32.5
Q ss_pred hHHHHHHHHHHHHhcceeEEec-CCCCHHHHHHHHHHHHH
Q 033095 10 MDSELAKLDFACKEWGFFQLVN-HGVISAFLEKVKKKVKG 48 (127)
Q Consensus 10 r~~~~~~l~~A~~~~GFf~l~n-hGi~~~~~~~~~~~~~~ 48 (127)
..+.+++|.+.+.++..++|++ +|++...+.++.+..++
T Consensus 5 K~~~v~el~e~l~~~~~v~v~~~~gl~~~ql~~lR~~lr~ 44 (213)
T 3jsy_A 5 KIEEVKTLKGLIKSKPVVAIVDMMDVPAPQLQEIRDKIRD 44 (213)
T ss_dssp HHHHHHHHHHHHHHSSEEEEEECCSCCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhCCEEEEEEcCCCCHHHHHHHHHHHhC
Confidence 3567888999999998888887 79999888888887764
No 19
>1zav_A 50S ribosomal protein L10; ribosome structure and function, L10-L12 complex structure, L10E structure, L7/12 ribosomal stalk; 1.90A {Thermotoga maritima} SCOP: d.58.62.1 PDB: 1zaw_A 1zax_A
Probab=46.06 E-value=58 Score=21.06 Aligned_cols=39 Identities=10% Similarity=0.166 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHHhcceeEEec-CCCCHHHHHHHHHHHHHH
Q 033095 11 DSELAKLDFACKEWGFFQLVN-HGVISAFLEKVKKKVKGF 49 (127)
Q Consensus 11 ~~~~~~l~~A~~~~GFf~l~n-hGi~~~~~~~~~~~~~~f 49 (127)
.+.+++|.+.+++...++|++ +|++...+.++....++-
T Consensus 9 ~~~v~el~~~l~~~~~v~v~~~~gltv~q~~~LR~~lr~~ 48 (180)
T 1zav_A 9 ELIVKEMSEIFKKTSLILFADFLGFTVADLTELRSRLREK 48 (180)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCEEEEEEeCCCCHHHHHHHHHHHHhc
Confidence 467888999999999999887 599998888888877653
No 20
>2j01_J 50S ribosomal protein L10; ribosome, tRNA, paromomycin, mRNA, translation; 2.8A {Thermus thermophilus} PDB: 2j03_J 3d5b_J 3d5d_J 3i8i_Y 3kir_J 3kit_J 3kiw_J 3kiy_J 3mrz_I 3ms1_I 3pyt_I 3pyr_I 3pyo_I 3pyv_I
Probab=44.66 E-value=60 Score=20.83 Aligned_cols=38 Identities=24% Similarity=0.192 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHHhcc-eeEEec-CCCCHHHHHHHHHHHHH
Q 033095 11 DSELAKLDFACKEWG-FFQLVN-HGVISAFLEKVKKKVKG 48 (127)
Q Consensus 11 ~~~~~~l~~A~~~~G-Ff~l~n-hGi~~~~~~~~~~~~~~ 48 (127)
.+.+++|.+.+++.. .++|++ +|++...+.++....++
T Consensus 7 ~~~v~el~~~l~~~~~~v~v~~~~gltv~~~~~LR~~lr~ 46 (173)
T 2j01_J 7 VELLATLKENLERAQGSFFLVNYQGLPAKETHALRQALKQ 46 (173)
T ss_pred HHHHHHHHHHHHHCCCEEEEEEcCCCCHHHHHHHHHHHHH
Confidence 467888999999988 777776 69998888888877664
No 21
>2a1x_A Phytanoyl-COA dioxygenase; beta jelly roll, double-stranded beta-helix, structural GENO structural genomics consortium, SGC, oxidoreductase; HET: AKG; 2.50A {Homo sapiens} SCOP: b.82.2.9
Probab=40.37 E-value=40 Score=23.39 Aligned_cols=35 Identities=17% Similarity=0.225 Sum_probs=30.0
Q ss_pred HHHHHHHhcceeEEecCCCCHHHHHHHHHHHHHHhc
Q 033095 16 KLDFACKEWGFFQLVNHGVISAFLEKVKKKVKGFFN 51 (127)
Q Consensus 16 ~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~fF~ 51 (127)
+..+.+++.||+.|.|- ++.+.++++.+...++++
T Consensus 26 e~~~~f~~dGyvvl~~~-l~~e~v~~l~~~~~~~~~ 60 (308)
T 2a1x_A 26 EQRKFYEENGFLVIKNL-VPDADIQRFRNEFEKICR 60 (308)
T ss_dssp THHHHHHHHSEEEETTC-SCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhCCEEEccCC-CCHHHHHHHHHHHHHHHh
Confidence 46778999999999875 899999999999888875
No 22
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=37.82 E-value=34 Score=23.71 Aligned_cols=40 Identities=13% Similarity=0.058 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHhcceeEEecCCCCHHHHHHHHHHHHHHhc
Q 033095 12 SELAKLDFACKEWGFFQLVNHGVISAFLEKVKKKVKGFFN 51 (127)
Q Consensus 12 ~~~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~fF~ 51 (127)
+...+|.+++++.|.++..|-++-..++-++.+.+.++|.
T Consensus 109 e~~~~L~~~a~~~~vv~a~N~siGvn~~~~l~~~aa~~~~ 148 (273)
T 1dih_A 109 AGKQAIRDAAADIAIVFAANFSVGVNVMLKLLEKAAKVMG 148 (273)
T ss_dssp HHHHHHHHHTTTSCEEECSCCCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhcCCCCEEEEecCcHHHHHHHHHHHHHHHhcC
Confidence 3466788889999999999998888888888888888883
No 23
>3emr_A ECTD; double stranded beta helix, oxidoreductase; HET: MSE; 1.85A {Virgibacillus salexigens}
Probab=37.52 E-value=55 Score=23.02 Aligned_cols=35 Identities=14% Similarity=0.135 Sum_probs=29.3
Q ss_pred HHHHHHHhcceeEEecCCCCHHHHHHHHHHHHHHhc
Q 033095 16 KLDFACKEWGFFQLVNHGVISAFLEKVKKKVKGFFN 51 (127)
Q Consensus 16 ~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~fF~ 51 (127)
+..+.+++.||+.|.|- ++.+.++++.+...++.+
T Consensus 38 eqi~~f~~dGyvvi~~~-ls~eev~~lr~~i~~~~~ 72 (310)
T 3emr_A 38 EQLDSYEKNGFLQIKNF-FSEDEVIDMQKAIFELQD 72 (310)
T ss_dssp HHHHHHHHHSEEEETTC-SCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCEEEccCC-CCHHHHHHHHHHHHHHHh
Confidence 46778999999988874 899999999998888775
No 24
>3o2g_A Gamma-butyrobetaine dioxygenase; gamma-butyrobetaine hydroxylase, 2-OXOG dioxygenase 1, oxidoreductase, structural genomics; HET: OGA NM2; 1.78A {Homo sapiens} PDB: 3ms5_A* 3n6w_A
Probab=37.16 E-value=47 Score=24.21 Aligned_cols=39 Identities=23% Similarity=0.084 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHHhcceeEEecCCCCHHHHHHHHHHHHHHhcC
Q 033095 11 DSELAKLDFACKEWGFFQLVNHGVISAFLEKVKKKVKGFFNL 52 (127)
Q Consensus 11 ~~~~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~fF~l 52 (127)
++.+.++.+|+.++|++.+.|-.++.+ ...+.++.|-.+
T Consensus 135 d~~~~~~~~~l~~~Gvv~frg~~~~~~---~~~~~a~~~G~l 173 (388)
T 3o2g_A 135 DEHAYKWLSTLKKVGIVRLTGASDKPG---EVSKLGKRMGFL 173 (388)
T ss_dssp HHHHHHHHHHHHHHSEEEEECCCSSTT---HHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHhcCEEEEeCCCCCHH---HHHHHHHHhCCC
Confidence 356778999999999999999888754 445566676544
No 25
>3iz5_s 60S acidic ribosomal protein P0 (L10P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_s
Probab=36.14 E-value=77 Score=22.71 Aligned_cols=39 Identities=21% Similarity=0.141 Sum_probs=33.5
Q ss_pred hHHHHHHHHHHHHhcceeEEec-CCCCHHHHHHHHHHHHH
Q 033095 10 MDSELAKLDFACKEWGFFQLVN-HGVISAFLEKVKKKVKG 48 (127)
Q Consensus 10 r~~~~~~l~~A~~~~GFf~l~n-hGi~~~~~~~~~~~~~~ 48 (127)
..+.+.+|.+.+.++..++|++ +|++...+.++.+..+.
T Consensus 11 K~~~v~el~e~l~~y~~v~vv~~~gl~v~ql~~LR~~lR~ 50 (319)
T 3iz5_s 11 KVAYDKKLCQLLDEYTKVLIAVADNVGSNQLQEIRKGLRG 50 (319)
T ss_dssp SSHHHHHHHHHHHHCSEEEEEECTTSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCEEEEEEcCCCCHHHHHHHHHHHhC
Confidence 3578889999999999988887 79999999988888774
No 26
>1oih_A Putative alkylsulfatase ATSK; non-heme Fe(II) alphaketoglutarate dependent dioxygenase, jelly roll, oxidoreductase; 1.89A {Pseudomonas putida} SCOP: b.82.2.5 PDB: 1oii_A* 1oij_B* 1vz4_A 1vz5_A 1oik_A* 1oij_A* 1oij_C*
Probab=35.80 E-value=69 Score=22.17 Aligned_cols=39 Identities=5% Similarity=-0.082 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHhcceeEEecCC-CCHHHHHHHHHHHHHHhcC
Q 033095 11 DSELAKLDFACKEWGFFQLVNHG-VISAFLEKVKKKVKGFFNL 52 (127)
Q Consensus 11 ~~~~~~l~~A~~~~GFf~l~nhG-i~~~~~~~~~~~~~~fF~l 52 (127)
++.+++|.+++.++|++.+.|-. ++. ++..+.++.|-.+
T Consensus 39 ~~~~~~l~~~l~~~Gvv~fRg~~~l~~---~~~~~~~~~fG~l 78 (301)
T 1oih_A 39 AATVEAIQAALVRHKVIFFRGQTHLDD---QSQEGFAKLLGEP 78 (301)
T ss_dssp HHHHHHHHHHHHHHSEEEECCCTTCCH---HHHHHHHHTTSCB
T ss_pred HHHHHHHHHHHHHCCEEEECCCCCCCH---HHHHHHHHHhCCC
Confidence 45677899999999999999987 874 4556666666543
No 27
>1otj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, alpha ketoglutarate-dependent dioxygenase, oxidoreductase; 1.90A {Escherichia coli} SCOP: b.82.2.5 PDB: 1gqw_A* 1os7_A* 1gy9_A
Probab=35.68 E-value=76 Score=21.66 Aligned_cols=38 Identities=13% Similarity=0.182 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHHhcceeEEecCCCCHHHHHHHHHHHHHHhc
Q 033095 11 DSELAKLDFACKEWGFFQLVNHGVISAFLEKVKKKVKGFFN 51 (127)
Q Consensus 11 ~~~~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~fF~ 51 (127)
.+.+.+|.+++.++|++.+.|-.++.+ ...+.++.|=.
T Consensus 29 ~~~~~~l~~~l~~~Gvv~frg~~~~~~---~~~~~~~~~G~ 66 (283)
T 1otj_A 29 DNQFEQLYHAVLRHQVVFLRDQAITPQ---QQRALAQRFGE 66 (283)
T ss_dssp HHHHHHHHHHHHHHSEEEECSCCCCHH---HHHHHHHTTSC
T ss_pred HHHHHHHHHHHHHCCEEEECCCCCCHH---HHHHHHHHhCC
Confidence 456778999999999999999888754 44455566643
No 28
>3dd7_B PHD, prevent HOST death protein; all alpha, ribosome inhibitor; HET: MSE; 1.70A {Enterobacteria phage P1}
Probab=34.34 E-value=32 Score=14.65 Aligned_cols=20 Identities=10% Similarity=-0.012 Sum_probs=16.6
Q ss_pred cchHHHHHHHHHHHHhhhhC...
Q 033095 108 PSLRFSLFVLDMDLQAKSEN... 127 (127)
Q Consensus 108 ~~fr~~~~~y~~~~~~la~~... 127 (127)
.+|-..|..+...+.+|+.|
T Consensus 4 aEFaaIm~~hg~t~~~L~dR... 23 (23)
T 3dd7_B 4 AEFASLFDTLDSTNKEMVNRxxx 26 (26)
T ss_pred hHHHHHHHHHhHHHHHHhcC...
Confidence 47888999999999998754
No 29
>3u5i_q A0, L10E, 60S acidic ribosomal protein P0; translation, ribosome, ribosomal R ribosomal protein, STM1; 3.00A {Saccharomyces cerevisiae} PDB: 4b6a_q 3izc_s 3izs_s 3j16_G* 3o5h_M 3jyw_8
Probab=32.62 E-value=77 Score=22.61 Aligned_cols=39 Identities=26% Similarity=0.320 Sum_probs=32.9
Q ss_pred hHHHHHHHHHHHHhcceeEEec-CCCCHHHHHHHHHHHHH
Q 033095 10 MDSELAKLDFACKEWGFFQLVN-HGVISAFLEKVKKKVKG 48 (127)
Q Consensus 10 r~~~~~~l~~A~~~~GFf~l~n-hGi~~~~~~~~~~~~~~ 48 (127)
..+.+.+|.+.+.++..++|++ +|++...+.++.+..+.
T Consensus 8 K~~~v~el~e~l~~~~~v~vv~~~gl~v~ql~~LR~~lR~ 47 (312)
T 3u5i_q 8 KAEYFAKLREYLEEYKSLFVVGVDNVSSQQMHEVRKELRG 47 (312)
T ss_dssp HHHHHHHHHHHHHHCSEEEEEECSSCCHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHHHHhCCEEEEEecCCCCHHHHHHHHHHHhc
Confidence 3467888999999999888887 79999988888887764
No 30
>4exq_A UPD, URO-D, uroporphyrinogen decarboxylase; ssgcid, NIH, SBRI, heme biosynthesis, structural GENO niaid; 1.65A {Burkholderia thailandensis}
Probab=32.10 E-value=1e+02 Score=22.25 Aligned_cols=38 Identities=13% Similarity=0.141 Sum_probs=26.6
Q ss_pred HHHHHHHHHHH-hcceeEEecCCCC----HHHHHHHHHHHHHH
Q 033095 12 SELAKLDFACK-EWGFFQLVNHGVI----SAFLEKVKKKVKGF 49 (127)
Q Consensus 12 ~~~~~l~~A~~-~~GFf~l~nhGi~----~~~~~~~~~~~~~f 49 (127)
+.+.++.+++. .-||+.=.+|||+ .+.+..+.++++++
T Consensus 316 ~~v~~~l~~~g~~~g~I~n~Ghgi~p~tp~Env~a~veav~~~ 358 (368)
T 4exq_A 316 AEARAVLDSYGNHPGHVFNLGHGISQFTPPEHVAELVDEVHRH 358 (368)
T ss_dssp HHHHHHHHHHCSCSCEEEEESSCCCTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCEEEeCCCCCCCCcCHHHHHHHHHHHHHh
Confidence 44555555554 3579888899985 56788888877775
No 31
>3ugs_B Undecaprenyl pyrophosphate synthase; niaid, csgid, structural genomics, center for structural GEN infectious diseases; HET: FFT; 2.46A {Campylobacter jejuni} SCOP: c.101.1.0
Probab=31.53 E-value=1e+02 Score=21.01 Aligned_cols=41 Identities=15% Similarity=0.090 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHhcceeEEe-------cCCCCHHHHHHHHHHHHHHhc
Q 033095 11 DSELAKLDFACKEWGFFQLV-------NHGVISAFLEKVKKKVKGFFN 51 (127)
Q Consensus 11 ~~~~~~l~~A~~~~GFf~l~-------nhGi~~~~~~~~~~~~~~fF~ 51 (127)
.+.+.++.++|.+.|.=+|+ |-.=|++.++.+++...+++.
T Consensus 36 ~~~~~~i~~~c~~lGI~~lTlYaFStENw~Rp~~EV~~Lm~L~~~~l~ 83 (225)
T 3ugs_B 36 VKTMQKLMEVCMEENISNLSLFAFSTENWKRPKDEIDFIFELLDRCLD 83 (225)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEEEESGGGGSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEEEEcccccCCCHHHHHHHHHHHHHHHH
Confidence 35677899999999976665 667788999999999988874
No 32
>1h1j_S THO1 protein; SAP domain, DNA binding; NMR {Saccharomyces cerevisiae} SCOP: a.140.2.1 PDB: 2wqg_A
Probab=31.50 E-value=57 Score=16.67 Aligned_cols=31 Identities=13% Similarity=0.183 Sum_probs=24.0
Q ss_pred HHHHHHHHHHHhcceeEEecCCCCHHHHHHHHHH
Q 033095 12 SELAKLDFACKEWGFFQLVNHGVISAFLEKVKKK 45 (127)
Q Consensus 12 ~~~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~ 45 (127)
-.+++|.+.|+..| |.-.|.-.++|+++...
T Consensus 8 ltV~eLK~~Lk~RG---L~~~G~KadLieRL~~~ 38 (51)
T 1h1j_S 8 LTVVQLKDLLTKRN---LSVGGLKNELVQRLIKD 38 (51)
T ss_dssp CCHHHHHHHHHHTT---CCCCSSHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHcC---CCCCCcHHHHHHHHHHH
Confidence 34778889999998 34567788999998765
No 33
>1vm6_A DHPR, dihydrodipicolinate reductase; TM1520, structural genomics, protein structure initiative, PSI, joint center for structu genomics; HET: NAD PG4; 2.27A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3
Probab=30.99 E-value=52 Score=22.47 Aligned_cols=39 Identities=18% Similarity=0.121 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHhcceeEEecCCCCHHHHHHHHHHHHHHh
Q 033095 12 SELAKLDFACKEWGFFQLVNHGVISAFLEKVKKKVKGFF 50 (127)
Q Consensus 12 ~~~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~fF 50 (127)
+..+.|.+++++.++++--|-.|--.++.++.+.+.++|
T Consensus 90 ~~~~~l~~~a~~~~vv~apNfSlGvnll~~l~~~aA~~l 128 (228)
T 1vm6_A 90 EHLQMLRELSKEVPVVQAYNFSIGINVLKRFLSELVKVL 128 (228)
T ss_dssp HHHHHHHHHTTTSEEEECSCCCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhhCCEEEeccccHHHHHHHHHHHHHHHhc
Confidence 344567777888888888888887788888888777777
No 34
>2rnn_A E3 SUMO-protein ligase SIZ1; SUMO ligase, DNA binding, sumoylation, metal-binding, nucLeu phosphoprotein, UBL conjugation pathway; NMR {Saccharomyces cerevisiae}
Probab=30.72 E-value=69 Score=19.41 Aligned_cols=31 Identities=10% Similarity=0.263 Sum_probs=24.3
Q ss_pred HHHHHHHHHHhcceeEEecCCCCHHHHHHHHHHH
Q 033095 13 ELAKLDFACKEWGFFQLVNHGVISAFLEKVKKKV 46 (127)
Q Consensus 13 ~~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~ 46 (127)
.+++|.+.|+..| +.--|.-+++++++....
T Consensus 41 tVaELK~~cr~~G---L~~sGkKaeLi~RI~~yl 71 (114)
T 2rnn_A 41 KVSELKDICRSVS---FPVSGRKAVLQDLIRNFL 71 (114)
T ss_dssp CHHHHHHHHHHTT---CCTTSCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHcC---CCcCCcHHHHHHHHHHHH
Confidence 3677999999999 456677889998887643
No 35
>1nx8_A CARC, carbapenem synthase; jelly roll, unknown function; HET: AKG N7P; 2.30A {Pectobacterium carotovorum} SCOP: b.82.2.8 PDB: 1nx4_A*
Probab=30.61 E-value=84 Score=21.28 Aligned_cols=35 Identities=11% Similarity=0.091 Sum_probs=26.8
Q ss_pred HHHHHHHHHhcceeEEecCCCCHHHHHHHHHHHHHHhc
Q 033095 14 LAKLDFACKEWGFFQLVNHGVISAFLEKVKKKVKGFFN 51 (127)
Q Consensus 14 ~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~fF~ 51 (127)
+++|.+++.++|++.+.|-.++.+ ...+.++.|=.
T Consensus 29 ~~~l~~~l~~~G~v~~rg~~~~~~---~~~~~~~~~G~ 63 (273)
T 1nx8_A 29 TETIKNLLMRQGFVVVKNLDIDSD---TFRDIYSAYGT 63 (273)
T ss_dssp HHHHHHHHHHHCEEEECSCCCCHH---HHHHHHHTTSE
T ss_pred HHHHHHHHHHCCEEEECCCCCCHH---HHHHHHHHhCC
Confidence 667999999999999999888753 45556666643
No 36
>4h8e_A Undecaprenyl pyrophosphate synthase; alpha-helix, prenyl transferase, cell WALL biosynthesis, FAR diphosphate binding; HET: FPP; 1.30A {Staphylococcus aureus subsp}
Probab=30.57 E-value=83 Score=21.87 Aligned_cols=40 Identities=13% Similarity=0.132 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHhcceeEEe-------cCCCCHHHHHHHHHHHHHHhc
Q 033095 12 SELAKLDFACKEWGFFQLV-------NHGVISAFLEKVKKKVKGFFN 51 (127)
Q Consensus 12 ~~~~~l~~A~~~~GFf~l~-------nhGi~~~~~~~~~~~~~~fF~ 51 (127)
+.+.++.++|.+.|.=+|+ |-.=|.+.++.++...++++.
T Consensus 55 ~~~~~iv~~c~~lGI~~lTlYaFStENwkRp~~EV~~Lm~L~~~~l~ 101 (256)
T 4h8e_A 55 QTIKKITRIASDIGVKYLTLYAFSTENWSRPESEVNYIMNLPVNFLK 101 (256)
T ss_dssp HHHHHHHHHHHHHTCSEEEEEEEETTGGGSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEEEEchhhhCCCHHHHHHHHHHHHHHHH
Confidence 4667899999999976666 666688999999999888885
No 37
>3kz5_E Protein SOPB; partition, segregation, F plasmid, DNA-binding protein, DNA- DNA binding protein; 1.58A {Escherichia coli}
Probab=30.11 E-value=61 Score=16.66 Aligned_cols=23 Identities=22% Similarity=0.320 Sum_probs=18.7
Q ss_pred eEEecCCCCHHHHHHHHHHHHHH
Q 033095 27 FQLVNHGVISAFLEKVKKKVKGF 49 (127)
Q Consensus 27 f~l~nhGi~~~~~~~~~~~~~~f 49 (127)
|+|.-.-||.++|+++...-++.
T Consensus 25 f~Ld~~~iP~~~IeKIE~lL~e~ 47 (52)
T 3kz5_E 25 LNLDRSRVPTECIEKIEAILKEL 47 (52)
T ss_dssp EEEETTTSCHHHHHHHHHHHHHH
T ss_pred EEeccccCCHHHHHHHHHHHHHH
Confidence 56666789999999999887765
No 38
>3rcm_A TATD family hydrolase; HET: CIT; 2.05A {Pseudomonas putida}
Probab=29.43 E-value=1.3e+02 Score=20.94 Aligned_cols=36 Identities=19% Similarity=0.099 Sum_probs=30.1
Q ss_pred HHHHHHHHHhcceeEEecCCCCHHHHHHHHHHHHHH
Q 033095 14 LAKLDFACKEWGFFQLVNHGVISAFLEKVKKKVKGF 49 (127)
Q Consensus 14 ~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~f 49 (127)
..++.+.+++.|.-.++.-|++.+...++.+.++++
T Consensus 19 ~~~vl~~a~~~gV~~~v~~g~~~~~~~~~~~la~~~ 54 (287)
T 3rcm_A 19 QAAIVERALEAGVTQMLLTGTSLAVSEQALELCQQL 54 (287)
T ss_dssp HHHHHHHHHHTTEEEEEECCCSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHhC
Confidence 456777888889999898899998888888888775
No 39
>1zrj_A E1B-55KDA-associated protein 5 isoform C; SAP domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.140.2.1
Probab=29.23 E-value=62 Score=16.45 Aligned_cols=32 Identities=13% Similarity=0.251 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHhcceeEEecCCCCHHHHHHHHHH
Q 033095 11 DSELAKLDFACKEWGFFQLVNHGVISAFLEKVKKK 45 (127)
Q Consensus 11 ~~~~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~ 45 (127)
.-.+++|.+.|+..|. .-.|.-.++|+++...
T Consensus 12 klkV~eLK~eLk~RgL---~~~G~Ka~Li~RL~~~ 43 (50)
T 1zrj_A 12 RLKVNELREELQRRGL---DTRGLKAELAERLQAA 43 (50)
T ss_dssp GSCHHHHHHHHHHTTC---CCCSCHHHHHHHHHHH
T ss_pred HCcHHHHHHHHHHcCC---CCCCcHHHHHHHHHHH
Confidence 3457789999999994 5577788999988764
No 40
>1v7z_A Creatininase, creatinine amidohydrolase; Mn-activated creatininase, substrate complex; 1.60A {Pseudomonas SP} SCOP: c.125.1.1 PDB: 1j2u_A 1j2t_A 3a6d_A 3a6j_A 3a6k_A 3a6l_A 3a6g_A 3a6f_A 3a6e_A 3a6h_A 1q3k_A
Probab=29.14 E-value=99 Score=21.17 Aligned_cols=34 Identities=12% Similarity=0.029 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHHhcce---eEEecCCCCHHHHHHHHH
Q 033095 11 DSELAKLDFACKEWGF---FQLVNHGVISAFLEKVKK 44 (127)
Q Consensus 11 ~~~~~~l~~A~~~~GF---f~l~nhGi~~~~~~~~~~ 44 (127)
.+.+..|.+.+..+|| +.|-+||=....++.+.+
T Consensus 96 ~~~l~di~~sl~~~GfrrivivNgHGGN~~~l~~a~~ 132 (260)
T 1v7z_A 96 TGTVQDIIRELARHGARRLVLMNGHYENSMFIVEGID 132 (260)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEEECSGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEEcCCCCcHHHHHHHHH
Confidence 3566679999999994 555579977666666554
No 41
>1zei_A Insulin, B28Asp-X-MCR; hormone, metabolic role, chemical activity, insulin mutant, cross-LINK, glucose metabolism, diabetes; 1.90A {Sus scrofa} SCOP: g.1.1.1 PDB: 6ins_E 1sju_A 2jzq_A
Probab=28.99 E-value=61 Score=16.70 Aligned_cols=19 Identities=32% Similarity=0.566 Sum_probs=14.8
Q ss_pred HHHHHHHHHHHHhcceeEE
Q 033095 11 DSELAKLDFACKEWGFFQL 29 (127)
Q Consensus 11 ~~~~~~l~~A~~~~GFf~l 29 (127)
.+.+..|...|.+-||++.
T Consensus 9 ~~L~daL~~vC~~rgf~~~ 27 (53)
T 1zei_A 9 SHLVEALYLVCGERGFFYT 27 (53)
T ss_dssp HHHHHHHHHHHGGGCEEEE
T ss_pred HHHHHHHHHHHcccCeecC
Confidence 3566678888998999876
No 42
>2fk5_A Fuculose-1-phosphate aldolase; class II aldolase, metal binding, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2flf_A
Probab=28.79 E-value=36 Score=22.42 Aligned_cols=23 Identities=22% Similarity=0.166 Sum_probs=18.2
Q ss_pred HHHHHHHHHHHhcceeEEecCCC
Q 033095 12 SELAKLDFACKEWGFFQLVNHGV 34 (127)
Q Consensus 12 ~~~~~l~~A~~~~GFf~l~nhGi 34 (127)
+....+.+++.+.-.+.+.|||+
T Consensus 131 ela~~i~~~l~~~~avll~nHG~ 153 (200)
T 2fk5_A 131 EAALSVAEALREHRACLLRGHGA 153 (200)
T ss_dssp HHHHHHHHHHHHCSEEEETTTEE
T ss_pred HHHHHHHHHhCcCCEEEECCCCc
Confidence 45556888888888889999996
No 43
>1r3s_A URO-D, uroporphyrinogen decarboxylase, UPD; uroporphyrinogen decarboxylase coproporphyrinogen, X-RAY crystallography, lyase; HET: 1CP; 1.65A {Homo sapiens} SCOP: c.1.22.1 PDB: 1r3t_A* 1r3r_A 1r3q_A* 1r3y_A* 1uro_A 3gvq_A 3gvr_A 1r3v_A* 3gvv_A 3gvw_A 1jph_A 1r3w_A* 3gw3_A 1jpi_A 1jpk_A 3gw0_A 2q71_A* 2q6z_A*
Probab=28.70 E-value=1.3e+02 Score=21.58 Aligned_cols=37 Identities=8% Similarity=0.100 Sum_probs=25.0
Q ss_pred HHHHHHHHHHhcceeEEecCCCC----HHHHHHHHHHHHHH
Q 033095 13 ELAKLDFACKEWGFFQLVNHGVI----SAFLEKVKKKVKGF 49 (127)
Q Consensus 13 ~~~~l~~A~~~~GFf~l~nhGi~----~~~~~~~~~~~~~f 49 (127)
.+.++.+.+..-||..=.+|||+ .+.+..+.++++++
T Consensus 320 ~v~~~l~~~g~~g~I~~~ghgi~~~~p~env~a~v~~v~~~ 360 (367)
T 1r3s_A 320 LVKQMLDDFGPHRYIANLGHGLYPDMDPEHVGAFVDAVHKH 360 (367)
T ss_dssp HHHHHHHHHCSSSEEEEESSCCCTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCeeecCCCCCCCCCCHHHHHHHHHHHHHH
Confidence 34444444333578888889975 57788888888776
No 44
>2kvu_A MKL/myocardin-like protein 1; SAP motif, DNA/RNA binding, structural genomics, northeast structural genomics consortium (NESG), PSI-2; NMR {Homo sapiens} PDB: 2kw9_A
Probab=28.32 E-value=82 Score=17.56 Aligned_cols=32 Identities=22% Similarity=0.297 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHhcceeEEecCCCCHHHHHHHHHH
Q 033095 11 DSELAKLDFACKEWGFFQLVNHGVISAFLEKVKKK 45 (127)
Q Consensus 11 ~~~~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~ 45 (127)
.-.+++|.+-|+..| |.-.|.-.++|+++...
T Consensus 28 klkVaeLK~eLk~RG---L~~sG~KaeLIeRL~~~ 59 (75)
T 2kvu_A 28 DMKVAELKQELKLRS---LPVSGTKTELIERLRAY 59 (75)
T ss_dssp TSCHHHHHHHHHHTT---CCCCSCHHHHHHHHHHH
T ss_pred HCcHHHHHHHHHHcC---CCCCCCHHHHHHHHHHH
Confidence 345788999999999 45667788999998765
No 45
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A*
Probab=28.28 E-value=1.3e+02 Score=20.48 Aligned_cols=35 Identities=9% Similarity=0.111 Sum_probs=28.6
Q ss_pred HHHHHHHHHhcceeEEecCCCCHHHHHHHHHHHHHH
Q 033095 14 LAKLDFACKEWGFFQLVNHGVISAFLEKVKKKVKGF 49 (127)
Q Consensus 14 ~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~f 49 (127)
...|.+++...|++.|.|- ++.+.++.+.+.+...
T Consensus 16 ~~~i~~~L~~~g~~Vid~f-Ls~ee~~~L~~~~~~~ 50 (247)
T 2hbt_A 16 LEYIVPCMNKHGICVVDDF-LGKETGQQIGDEVRAL 50 (247)
T ss_dssp HHTHHHHHHHTSEEEESSS-SCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhccCCEEEECCC-CCHHHHHHHHHHHHhh
Confidence 3459999999999876654 9999999999988774
No 46
>2fct_A Syringomycin biosynthesis enzyme 2; mononuclear iron, cupin, halogenase, biosynthetic protein; HET: DSU AKG; 1.60A {Pseudomonas syringae PV} SCOP: b.82.2.9 PDB: 2fcu_A* 2fcv_A*
Probab=28.10 E-value=1.1e+02 Score=20.99 Aligned_cols=34 Identities=9% Similarity=0.073 Sum_probs=26.8
Q ss_pred HHHHHHHhcceeEEecCCCCHHHHHHHHHHHHHHh
Q 033095 16 KLDFACKEWGFFQLVNHGVISAFLEKVKKKVKGFF 50 (127)
Q Consensus 16 ~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~fF 50 (127)
+..+.+++.||+.|.|- ++.+.++++.+......
T Consensus 13 e~~~~f~~dGyvvl~~~-l~~e~v~~l~~~~~~~l 46 (313)
T 2fct_A 13 EQRASFEKNGFIGPFDA-YSPEEMKETWKRTRLRL 46 (313)
T ss_dssp HHHHHHHHHSEEEEEES-SCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCEEECCCC-CCHHHHHHHHHHHHHHH
Confidence 46678999999999874 79999999887665443
No 47
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=28.04 E-value=1.6e+02 Score=20.80 Aligned_cols=45 Identities=11% Similarity=-0.020 Sum_probs=31.9
Q ss_pred HHHHHHHHHHH--hcceeEEecCCCC--HHHHHHHHHHHHHHhcCCHHHH
Q 033095 12 SELAKLDFACK--EWGFFQLVNHGVI--SAFLEKVKKKVKGFFNLSMEEK 57 (127)
Q Consensus 12 ~~~~~l~~A~~--~~GFf~l~nhGi~--~~~~~~~~~~~~~fF~lp~eeK 57 (127)
.....+..+|+ +..++.= -+||. .+.++++.+..++.+.+|.-.|
T Consensus 54 ~~~~~~~~~~~sGtDai~VG-S~~vt~~~~~~~~~v~~ik~~~~lPvil~ 102 (286)
T 3vk5_A 54 EAVEKAAELTRLGFAAVLLA-STDYESFESHMEPYVAAVKAATPLPVVLH 102 (286)
T ss_dssp HHHHHHHHHHHTTCSCEEEE-CSCCSSHHHHHHHHHHHHHHHCSSCEEEE
T ss_pred HHHHHHHHHHhcCCCEEEEc-cCCCCcchHHHHHHHHHHHHhCCCCEEEE
Confidence 33334556666 3444444 78899 9999999999999888886543
No 48
>2wfu_B Probable insulin-like peptide 5 B chain; cleavage on PAIR of basic residues, signaling protein; 1.85A {Drosophila melanogaster} PDB: 2wfv_B
Probab=27.67 E-value=27 Score=15.32 Aligned_cols=14 Identities=36% Similarity=0.738 Sum_probs=10.5
Q ss_pred HHHHHHHHHHHhcce
Q 033095 12 SELAKLDFACKEWGF 26 (127)
Q Consensus 12 ~~~~~l~~A~~~~GF 26 (127)
+.++.|...|.+ ||
T Consensus 9 ~L~eaL~~vC~~-GF 22 (26)
T 2wfu_B 9 ALMDMLRVACPN-GF 22 (26)
T ss_dssp HHHHHHHHHCSS-CC
T ss_pred HHHHHHHHHHhc-cC
Confidence 566678888877 87
No 49
>2k9l_A RNA polymerase sigma factor RPON; protein, transcription; NMR {Aquifex aeolicus}
Probab=27.50 E-value=53 Score=18.00 Aligned_cols=37 Identities=27% Similarity=0.120 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHhcceeEEec------CCCCHHHHHHHHHHHHH
Q 033095 12 SELAKLDFACKEWGFFQLVN------HGVISAFLEKVKKKVKG 48 (127)
Q Consensus 12 ~~~~~l~~A~~~~GFf~l~n------hGi~~~~~~~~~~~~~~ 48 (127)
..+..|..++-+.||+...- -|++.+.++++.+....
T Consensus 32 ~Ia~~iI~~LD~~GYL~~~l~eia~~l~~~~~eve~vL~~lQ~ 74 (76)
T 2k9l_A 32 ELALELLNYLNEKGFLSKSVEEISDVLRCSVEELEKVRQKVLR 74 (76)
T ss_dssp HHHHHHHHHCTTSSTTCCCHHHHHHHHTSCHHHHHHHHHHHHT
T ss_pred HHHHHHHHhcCCCCCCCCCHHHHHHHcCCCHHHHHHHHHHHhc
Confidence 34445999999999997442 25666666666555443
No 50
>3a1y_G Acidic ribosomal protein P0; stalk, helix SPIN, ribonucleoprotein; 2.13A {Pyrococcus horikoshii}
Probab=27.43 E-value=1e+02 Score=21.52 Aligned_cols=39 Identities=15% Similarity=0.260 Sum_probs=32.8
Q ss_pred hHHHHHHHHHHHHhcceeEEec-CCCCHHHHHHHHHHHHH
Q 033095 10 MDSELAKLDFACKEWGFFQLVN-HGVISAFLEKVKKKVKG 48 (127)
Q Consensus 10 r~~~~~~l~~A~~~~GFf~l~n-hGi~~~~~~~~~~~~~~ 48 (127)
..+.+++|.+.+.+...++|++ +|++...+.++.+..++
T Consensus 8 K~~~v~el~~~l~~~~~v~v~~~~gl~~~ql~~lR~~lr~ 47 (284)
T 3a1y_G 8 KKKEVEELAKLIKSYPVIALVDVSSMPAYPLSQMRRLIRE 47 (284)
T ss_dssp TTTHHHHHHHHHTTCSEEEEEECTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCEEEEEEcCCCCHHHHHHHHHHHHh
Confidence 3567889999999998888886 79999988888887764
No 51
>2kqp_A Insulin; carbohydrate metabolism, cleavage on PAIR of BAS residues, diabetes mellitus, disease mutation, disulfide BO glucose metabolism, hormone; NMR {Homo sapiens}
Probab=27.36 E-value=30 Score=19.72 Aligned_cols=20 Identities=30% Similarity=0.521 Sum_probs=14.7
Q ss_pred HHHHHHHHHHHHhcceeEEe
Q 033095 11 DSELAKLDFACKEWGFFQLV 30 (127)
Q Consensus 11 ~~~~~~l~~A~~~~GFf~l~ 30 (127)
.+.+..|.-.|.+.||||..
T Consensus 9 ~~L~daL~~vC~~rGf~y~~ 28 (86)
T 2kqp_A 9 SDLVEALYLVCGERGFFYTK 28 (86)
T ss_dssp HHHHHHHHHHSGGGCCCCCC
T ss_pred HHHHHHHHHHHccCCcccCC
Confidence 35666788888888887754
No 52
>2irp_A Putative aldolase class 2 protein AQ_1979; aldehyde, enzymatic mechanism; 2.40A {Aquifex aeolicus}
Probab=27.21 E-value=36 Score=22.39 Aligned_cols=23 Identities=17% Similarity=0.117 Sum_probs=17.3
Q ss_pred HHHHHHHHHHHhcc---eeEEecCCC
Q 033095 12 SELAKLDFACKEWG---FFQLVNHGV 34 (127)
Q Consensus 12 ~~~~~l~~A~~~~G---Ff~l~nhGi 34 (127)
+.+..+.+++.+.+ -+.+.|||+
T Consensus 151 ~La~~i~~~l~~~~~~~avll~nHG~ 176 (208)
T 2irp_A 151 LLAKEVENYFKTSEDKYGFLIRGHGL 176 (208)
T ss_dssp HHHHHHHHHHHHCSCCSCEEETTTEE
T ss_pred HHHHHHHHHHhcCCCceEEEEcCCCC
Confidence 44556888888765 688899996
No 53
>3j21_k Acidic ribosomal protein P0 homolog; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=27.01 E-value=83 Score=22.70 Aligned_cols=39 Identities=15% Similarity=0.254 Sum_probs=32.9
Q ss_pred hHHHHHHHHHHHHhcceeEEec-CCCCHHHHHHHHHHHHH
Q 033095 10 MDSELAKLDFACKEWGFFQLVN-HGVISAFLEKVKKKVKG 48 (127)
Q Consensus 10 r~~~~~~l~~A~~~~GFf~l~n-hGi~~~~~~~~~~~~~~ 48 (127)
..+.+.+|.+.+.++..++|++ +|++...+.++.+..+.
T Consensus 8 K~~~v~el~e~l~~~~~v~v~~~~gl~v~ql~~lR~~lr~ 47 (339)
T 3j21_k 8 KKKEVEELANLIKSYPVVALVDVSSMPAYPLSQMRRLIRE 47 (339)
T ss_dssp TTTHHHHHHHHHHHSSEEEEEECTTCCTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCEEEEEEcCCCCHHHHHHHHHHHhc
Confidence 3567889999999998888887 79998888888888775
No 54
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=26.26 E-value=62 Score=22.07 Aligned_cols=39 Identities=10% Similarity=0.117 Sum_probs=30.0
Q ss_pred HHHHHHHHHHH---hcceeEEecCCCCHHHHHHHHHHHHHHh
Q 033095 12 SELAKLDFACK---EWGFFQLVNHGVISAFLEKVKKKVKGFF 50 (127)
Q Consensus 12 ~~~~~l~~A~~---~~GFf~l~nhGi~~~~~~~~~~~~~~fF 50 (127)
+...+|.++|+ ..+.++.-|-++-..++-++.+.+.++|
T Consensus 82 e~~~~l~~aa~~~~~~~vv~a~N~siGv~ll~~l~~~aa~~~ 123 (245)
T 1p9l_A 82 ERFQQVESWLVAKPNTSVLIAPNFAIGAVLSMHFAKQAARFF 123 (245)
T ss_dssp HHHHHHHHHHHTSTTCEEEECSCCCHHHHHHHHHHHHHGGGC
T ss_pred HHHHHHHHHHHhCCCCCEEEECCccHHHHHHHHHHHHHHhhc
Confidence 34456778877 6778888888888888888888877777
No 55
>3lxr_F IPGB2; RHOA, GTPase, GEF, GEF-GTPase-complex, WXXXE, TTSS EF protein, bacterial GEF, cytoskeleton dynamics; HET: GDP; 1.68A {Shigella flexneri} PDB: 3lwn_F* 3lw8_E* 3lyq_A*
Probab=26.00 E-value=68 Score=21.23 Aligned_cols=41 Identities=15% Similarity=0.288 Sum_probs=33.3
Q ss_pred HHHH-HHHHHHhcceeEEecCCCCHHHHHHHHHHHHHHhcCCHHHHhh
Q 033095 13 ELAK-LDFACKEWGFFQLVNHGVISAFLEKVKKKVKGFFNLSMEEKKK 59 (127)
Q Consensus 13 ~~~~-l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~fF~lp~eeK~~ 59 (127)
.+.+ |++-|.+. |+.|+.+.-.++|.+...-|.+|++.+.+
T Consensus 78 ~VNk~ID~~c~~n------~~~Is~e~K~rIF~~v~~~~~~~LD~naA 119 (192)
T 3lxr_F 78 VVNQCIDKFCAEH------SRKIGDNLRKQIFKQVEKDYRISLDINAA 119 (192)
T ss_dssp HHHHHHHHHHHHH------TCCCCHHHHHHHHHHHHHHHTCCCCTTCC
T ss_pred HHHHHHHHHHHhc------CCcCChHHHHHHHHHHHHHhCCccchhhh
Confidence 4554 78888774 56899999999999999999998887644
No 56
>2ivy_A Hypothetical protein SSO1404; structural genomics, unknown function, CAS, RNAI, crispr; 1.4A {Sulfolobus solfataricus} SCOP: d.58.58.1 PDB: 2i8e_A
Probab=25.89 E-value=65 Score=18.78 Aligned_cols=40 Identities=18% Similarity=0.063 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHHhcceeEEecC----CCCHHHHHHHHHHHHHHh
Q 033095 11 DSELAKLDFACKEWGFFQLVNH----GVISAFLEKVKKKVKGFF 50 (127)
Q Consensus 11 ~~~~~~l~~A~~~~GFf~l~nh----Gi~~~~~~~~~~~~~~fF 50 (127)
.+...++.+.|+++||..|.+. -++......+....+++-
T Consensus 14 ~kr~~kv~k~L~~yGl~rvQ~SVFe~~lt~~~~~~l~~~L~~~i 57 (101)
T 2ivy_A 14 DNLRNRVAEFLKKKGLDRIQYSVFMGDLNSSRLKDVEAGLKIIG 57 (101)
T ss_dssp HHHHHHHHHHHHHTTCEEEETTEEEEEECHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHhCChhccccEEEEEcCHHHHHHHHHHHHHHh
Confidence 3566789999999999888874 256777777777666665
No 57
>2qh9_A UPF0215 protein AF_1433; structural genomics, PSI-2, MCSG, PR structure initiative; 1.80A {Archaeoglobus fulgidus}
Probab=25.64 E-value=54 Score=21.44 Aligned_cols=39 Identities=15% Similarity=-0.004 Sum_probs=31.2
Q ss_pred hcceeEEecCCCCHHHHHHHHHHHHHHhcCCHHHHhhhc
Q 033095 23 EWGFFQLVNHGVISAFLEKVKKKVKGFFNLSMEEKKKYW 61 (127)
Q Consensus 23 ~~GFf~l~nhGi~~~~~~~~~~~~~~fF~lp~eeK~~~~ 61 (127)
.+.=+||..+||+.+...++.......+.+|+..+....
T Consensus 132 ~v~pvyV~s~Gi~l~~A~~iv~~~~~~~riPEPlR~Ahl 170 (184)
T 2qh9_A 132 RIGDIYIQTAGLTPSEAEKLVKASLIKGNMPEPVRISHL 170 (184)
T ss_dssp EETTEEEEEESSCHHHHHHHHHHHCSSSSSCHHHHHHHH
T ss_pred CceeEEEEECCCCHHHHHHHHHHhcccCCCchhHHHHHH
Confidence 455578867999998888888888778899999987754
No 58
>4h0c_A Phospholipase/carboxylesterase; PSI-biology, midwest center for structural genomics, MCSG, hydrolase; HET: CIT; 1.62A {Dyadobacter fermentans}
Probab=24.96 E-value=1.4e+02 Score=19.13 Aligned_cols=33 Identities=9% Similarity=0.027 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHhcce----eEE--ecCCCCHHHHHHHHH
Q 033095 12 SELAKLDFACKEWGF----FQL--VNHGVISAFLEKVKK 44 (127)
Q Consensus 12 ~~~~~l~~A~~~~GF----f~l--~nhGi~~~~~~~~~~ 44 (127)
+...++.+++++.|. ... .+|+|+.+.++.+.+
T Consensus 168 ~~~~~~~~~L~~~g~~v~~~~ypg~gH~i~~~el~~i~~ 206 (210)
T 4h0c_A 168 SRVQESVTILEDMNAAVSQVVYPGRPHTISGDEIQLVNN 206 (210)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEETCCSSCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCeEEEEECCCCCCcCHHHHHHHHH
Confidence 445567777777775 222 379999887766543
No 59
>3ds4_A HIV-1 capsid protein; HIV, mutant, polyprotein, complex(viral protein/peptide), mainly alpha; 1.12A {Human immunodeficiency virus 1} PDB: 3dph_A 1a43_A 2xt1_A 2buo_A 3lry_A 2kod_A 3ds1_A 3dtj_A 3ds0_A 3ds5_A 3ds2_A 3ds3_A 2jo0_A 2jyg_A 2xxm_A 2xv6_A 2ont_A 1aum_A 1a8o_A 4arg_B ...
Probab=24.55 E-value=32 Score=19.64 Aligned_cols=13 Identities=23% Similarity=0.391 Sum_probs=10.9
Q ss_pred HHHHHHHHHHhcc
Q 033095 13 ELAKLDFACKEWG 25 (127)
Q Consensus 13 ~~~~l~~A~~~~G 25 (127)
.++++..||+++|
T Consensus 65 ~lee~~~aC~~vG 77 (86)
T 3ds4_A 65 TSEEMMTACQGVG 77 (86)
T ss_dssp CHHHHHHHHTTSS
T ss_pred CHHHHHHHccccC
Confidence 4677889999998
No 60
>2opi_A L-fuculose-1-phosphate aldolase; L-fuculose-1-phosphate aldolas structural genomics, PSI-2, protein structure initiative; 2.50A {Bacteroides thetaiotaomicron}
Probab=24.45 E-value=31 Score=22.83 Aligned_cols=23 Identities=22% Similarity=0.078 Sum_probs=18.3
Q ss_pred HHHHHHHHHHHhcceeEEecCCC
Q 033095 12 SELAKLDFACKEWGFFQLVNHGV 34 (127)
Q Consensus 12 ~~~~~l~~A~~~~GFf~l~nhGi 34 (127)
+....+.+++.+.-.+.+.|||+
T Consensus 138 ~la~~i~~~l~~~~avll~nHG~ 160 (212)
T 2opi_A 138 ELAKAVVEAMLKHNSVLLTNHGQ 160 (212)
T ss_dssp HHHHHHHHHTSSCSEEEETTTEE
T ss_pred HHHHHHHHHhccCCEEEEcCCCc
Confidence 45556888888778888999996
No 61
>3r1j_A Alpha-ketoglutarate-dependent taurine dioxygenase; ssgcid, oxidoreductase, structural genomics; 2.05A {Mycobacterium avium} SCOP: b.82.2.0 PDB: 3swt_A
Probab=24.44 E-value=1.7e+02 Score=20.43 Aligned_cols=39 Identities=5% Similarity=-0.043 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHHhcceeEEecC-CCCHHHHHHHHHHHHHHhcC
Q 033095 11 DSELAKLDFACKEWGFFQLVNH-GVISAFLEKVKKKVKGFFNL 52 (127)
Q Consensus 11 ~~~~~~l~~A~~~~GFf~l~nh-Gi~~~~~~~~~~~~~~fF~l 52 (127)
++.+++|.+|+.++|.+.+.|- .++.+ +..+.++.|=.+
T Consensus 33 d~~~~~l~~al~~~gvv~fR~q~~l~~~---~~~~fa~~fG~l 72 (301)
T 3r1j_A 33 DATVEQIRRALLTHKVIFFRHQHHLDDS---RQLEFARLLGTP 72 (301)
T ss_dssp HHHHHHHHHHHHHHSEEEECCCTTCCHH---HHHHHHHHHSCB
T ss_pred HHHHHHHHHHHHHCCEEEECCCCCCCHH---HHHHHHHhcCCc
Confidence 4677889999999999999997 78764 445566666544
No 62
>3mwd_B ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_B*
Probab=24.37 E-value=1.2e+02 Score=21.74 Aligned_cols=37 Identities=16% Similarity=0.104 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHhcc--eeEEecCCCCHHHHHHHHHHHHH
Q 033095 12 SELAKLDFACKEWG--FFQLVNHGVISAFLEKVKKKVKG 48 (127)
Q Consensus 12 ~~~~~l~~A~~~~G--Ff~l~nhGi~~~~~~~~~~~~~~ 48 (127)
.+...+.+||..-| -+.++-.|++.+++.++.+.+++
T Consensus 91 ~a~~ai~ea~~~~Gv~~vViiT~G~~e~~~~~l~~~a~~ 129 (334)
T 3mwd_B 91 SAYDSTMETMNYAQIRTIAIIAEGIPEALTRKLIKKADQ 129 (334)
T ss_dssp THHHHHHHHTTSTTCCEEEECCSCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHH
Confidence 34567889998655 46666899999888888887765
No 63
>1pvt_A Sugar-phosphate aldolase; structural genomics, PSI, protein initiative, midwest center for structural genomics, MCSG; 2.50A {Thermotoga maritima} SCOP: c.74.1.1
Probab=23.93 E-value=41 Score=22.69 Aligned_cols=23 Identities=17% Similarity=-0.098 Sum_probs=18.3
Q ss_pred HHHHHHHHHHHhcceeEEecCCC
Q 033095 12 SELAKLDFACKEWGFFQLVNHGV 34 (127)
Q Consensus 12 ~~~~~l~~A~~~~GFf~l~nhGi 34 (127)
+....+.+++.+.--+.+.|||+
T Consensus 174 ela~~i~~~l~~~~avll~nHG~ 196 (238)
T 1pvt_A 174 ELGLKTVEKSEGKDAVLWDKHGV 196 (238)
T ss_dssp HHHHHHHHHTSSCSEEEETTSCE
T ss_pred HHHHHHHHHhccCCEEEEcCCCc
Confidence 45556888888878888999996
No 64
>1jjr_A KU70, thyroid autoantigen; DNA repair protein, protein-DNA interaction, solution structure, DNA binding protein; NMR {Homo sapiens} SCOP: a.140.2.1
Probab=23.81 E-value=93 Score=19.78 Aligned_cols=30 Identities=27% Similarity=0.414 Sum_probs=24.2
Q ss_pred HHHHHHHHHHhcceeEEecCCCCHHHHHHHHHH
Q 033095 13 ELAKLDFACKEWGFFQLVNHGVISAFLEKVKKK 45 (127)
Q Consensus 13 ~~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~ 45 (127)
.+++|.+.|+..| |.-.|--+++|+++.+.
T Consensus 65 tV~eLK~~l~~~g---L~~~GkKadLI~Ri~~~ 94 (151)
T 1jjr_A 65 TVPMLKEACRAYG---LKSGLKKQELLEALTKH 94 (151)
T ss_dssp CHHHHHHHHHHHT---CCCCSSSHHHHHHHHHT
T ss_pred cHHHHHHHHHHcC---CCCcccHHHHHHHHHHH
Confidence 4777899999988 66678889999998753
No 65
>3exc_X Uncharacterized protein; ferredoxin fold, double split beta-alpha-beta fold, dimer, C aspartate, RNA'ASE, hydrolase; 2.25A {Sulfolobus solfataricus} SCOP: d.58.58.0
Probab=23.64 E-value=85 Score=17.93 Aligned_cols=37 Identities=19% Similarity=0.150 Sum_probs=24.6
Q ss_pred HHHHHHHHHhcceeEEecC----CCCHHHHHHHHHHHHHHh
Q 033095 14 LAKLDFACKEWGFFQLVNH----GVISAFLEKVKKKVKGFF 50 (127)
Q Consensus 14 ~~~l~~A~~~~GFf~l~nh----Gi~~~~~~~~~~~~~~fF 50 (127)
..++.+.|+.+||..|.+. -+++....++.....+.-
T Consensus 18 r~kv~k~l~~yGl~rvQ~SVFe~~lt~~~~~~L~~~L~~~i 58 (91)
T 3exc_X 18 RNKLANNLKKLGLERIQRSAFEGDMDSQRMKDLVRVVKLIV 58 (91)
T ss_dssp HHHHHHHHHHTTCEEEETTEEEEECC--CHHHHHHHHHHHS
T ss_pred HHHHHHHHHHhCCccceeeEEEEECCHHHHHHHHHHHHHhc
Confidence 4789999999999888764 256655556555555444
No 66
>3ipw_A Hydrolase TATD family protein; niaid, ssgcid, seattle structural genomics center for infect disease, dysentery, liver abcess; 1.95A {Entamoeba histolytica hm-1}
Probab=23.58 E-value=1.8e+02 Score=20.68 Aligned_cols=36 Identities=6% Similarity=0.041 Sum_probs=29.9
Q ss_pred HHHHHHHHHhcceeEEecCCCCHHHHHHHHHHHHHH
Q 033095 14 LAKLDFACKEWGFFQLVNHGVISAFLEKVKKKVKGF 49 (127)
Q Consensus 14 ~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~f 49 (127)
..++.+.+++.|.-.++.-|++.+...++.+.++++
T Consensus 54 ~~~vl~rA~~aGV~~ii~~g~~~~~~~~~~~La~~~ 89 (325)
T 3ipw_A 54 IDVVLQRAERNGLSHIIITSGCLNDFKKAIEIINKY 89 (325)
T ss_dssp HHHHHHHHHHTTEEEEEECCCSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCcEEEEccCCHHHHHHHHHHHHHC
Confidence 456667778889999999999999999998888775
No 67
>1sed_A APC1180, hypothetical protein YHAI; structural genomics, four helix colied-coil, PSI, protein structure initiative; 2.10A {Bacillus subtilis} SCOP: a.219.1.1
Probab=23.05 E-value=36 Score=20.73 Aligned_cols=30 Identities=17% Similarity=0.130 Sum_probs=24.5
Q ss_pred EEecCCCCHHHHHHHHHHHHHHhcCCHHHH
Q 033095 28 QLVNHGVISAFLEKVKKKVKGFFNLSMEEK 57 (127)
Q Consensus 28 ~l~nhGi~~~~~~~~~~~~~~fF~lp~eeK 57 (127)
.|+++|++.+.++++.+.+..+=+.-.++|
T Consensus 34 lII~~~Ltk~eve~il~lce~L~~el~~QK 63 (117)
T 1sed_A 34 LLIDKGLSKEEGEAVMRICDELSEELATQK 63 (117)
T ss_dssp HHHHTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHccCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 467999999999999999998866555555
No 68
>1j93_A UROD, uroporphyrinogen decarboxylase; beta barrel, plastidial enzyme, crystallographic dimer, lyase; 2.30A {Nicotiana tabacum} SCOP: c.1.22.1
Probab=22.84 E-value=1.1e+02 Score=21.76 Aligned_cols=36 Identities=11% Similarity=0.092 Sum_probs=22.4
Q ss_pred HHHHHHHHHhcceeEEecCCC----CHHHHHHHHHHHHHH
Q 033095 14 LAKLDFACKEWGFFQLVNHGV----ISAFLEKVKKKVKGF 49 (127)
Q Consensus 14 ~~~l~~A~~~~GFf~l~nhGi----~~~~~~~~~~~~~~f 49 (127)
+.++.+.+..-||..=.+||| |.+-+..+.+.++++
T Consensus 312 v~~~l~~~~~~g~I~~~g~gi~~~~~~enl~a~ve~v~~~ 351 (353)
T 1j93_A 312 INDTVKKAGKGKHILNLGHGIKVGTPEENFAHFFEIAKGL 351 (353)
T ss_dssp HHHHHHHHCSSSEEBCBSSCCCTTCCHHHHHHHHHHHHTC
T ss_pred HHHHHHHhCCCCEEEeCCCCCCCCCCHHHHHHHHHHHHHh
Confidence 333444333346777778987 456777777777653
No 69
>3pvj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, Fe(II) binding, oxidoreductas; 1.85A {Pseudomonas putida KT2440} SCOP: b.82.2.5 PDB: 3v15_A 3v17_A*
Probab=22.25 E-value=1.5e+02 Score=20.28 Aligned_cols=39 Identities=13% Similarity=0.104 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHHhcceeEEecCCCCHHHHHHHHHHHHHHhcC
Q 033095 11 DSELAKLDFACKEWGFFQLVNHGVISAFLEKVKKKVKGFFNL 52 (127)
Q Consensus 11 ~~~~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~fF~l 52 (127)
++..++|.+|+.++|.+.+.|-.++.+ +..+.++.|=.+
T Consensus 27 ~~~~~~l~~~l~~~gvv~fR~q~l~~~---~~~~fa~~fG~l 65 (277)
T 3pvj_A 27 AEERDAIEQALLQHQVLFLRDQPINPE---QQARFAARFGDL 65 (277)
T ss_dssp HHHHHHHHHHHHHHSEEEESSCCCCHH---HHHHHHGGGSCE
T ss_pred HHHHHHHHHHHHHCCEEEECCCCCCHH---HHHHHHHHhCCC
Confidence 467788999999999999999888764 445566666543
No 70
>4fhz_A Phospholipase/carboxylesterase; alpha/beta hydrolase superfamily, central beta-STR sheet, flanked alpha helices, hydrolase; 2.01A {Rhodobacter sphaeroides} PDB: 4ftw_A*
Probab=22.15 E-value=1.9e+02 Score=19.75 Aligned_cols=42 Identities=21% Similarity=0.176 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHhcce---eEE---ecCCCCHHHHHHHHHHHHHHhcCCHH
Q 033095 12 SELAKLDFACKEWGF---FQL---VNHGVISAFLEKVKKKVKGFFNLSME 55 (127)
Q Consensus 12 ~~~~~l~~A~~~~GF---f~l---~nhGi~~~~~~~~~~~~~~fF~lp~e 55 (127)
+...++.+++++.|+ +++ .+|+|+.+.++.+.+..++. ||..
T Consensus 222 ~~~~~~~~~L~~~g~~~~~~~y~g~gH~i~~~~l~~~~~fL~~~--Lpd~ 269 (285)
T 4fhz_A 222 ADMSLAGEALAEAGFTTYGHVMKGTGHGIAPDGLSVALAFLKER--LPDA 269 (285)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEETTCCSSCCHHHHHHHHHHHHHH--CC--
T ss_pred HHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHH--CcCC
Confidence 445567777777775 222 37999998877665544332 4544
No 71
>3e2v_A 3'-5'-exonuclease; structural genomics, hydrolase, PSI-2, protein initiative, NEW YORK SGX research center for structural GEN nysgxrc; 1.50A {Saccharomyces cerevisiae}
Probab=22.13 E-value=1.9e+02 Score=21.34 Aligned_cols=37 Identities=14% Similarity=-0.023 Sum_probs=31.9
Q ss_pred HHHHHHHHHHhcceeEEecCCCCHHHHHHHHHHHHHH
Q 033095 13 ELAKLDFACKEWGFFQLVNHGVISAFLEKVKKKVKGF 49 (127)
Q Consensus 13 ~~~~l~~A~~~~GFf~l~nhGi~~~~~~~~~~~~~~f 49 (127)
.+.++.+.++..|--.++..|++.+...++.+.++++
T Consensus 39 D~~~vl~rA~~~GV~~ii~~g~~l~~s~~~~~La~~~ 75 (401)
T 3e2v_A 39 DYVKLLERAAQRHVKNALVTGSSIAESQSAIELVSSV 75 (401)
T ss_dssp CHHHHHHHHHHTTEEEEEECCCSHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHCCCCEEEEecCCHHHHHHHHHHHHHC
Confidence 3556777788889999999999999999999999886
No 72
>3no4_A Creatininase, creatinine amidohydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.00A {Nostoc punctiforme pcc 73102}
Probab=21.46 E-value=1.8e+02 Score=20.10 Aligned_cols=36 Identities=17% Similarity=0.115 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHHhcce---eEEecCCCCHHHHHHHHHHH
Q 033095 11 DSELAKLDFACKEWGF---FQLVNHGVISAFLEKVKKKV 46 (127)
Q Consensus 11 ~~~~~~l~~A~~~~GF---f~l~nhGi~~~~~~~~~~~~ 46 (127)
.+.+..|.+.+..+|| +.|-+||=....++.+....
T Consensus 105 ~~~l~di~~sl~~~G~~~iv~vNgHGGN~~~l~~a~~el 143 (267)
T 3no4_A 105 IQVVRDYVTCLAKAGFSKFYFINGHGGNIATLKAAFSET 143 (267)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEEECCTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEEECCcCcHHHHHHHHHHH
Confidence 3566678899999998 44557997766666655543
No 73
>2v9l_A Rhamnulose-1-phosphate aldolase; entropy index, metal-binding, oligomerization, zinc, lyase, class II, cytoplasm; HET: PGO; 1.23A {Escherichia coli} PDB: 2uyv_A* 1ojr_A 2v9g_A* 1gt7_A* 2v9n_A* 2uyu_A* 2v9m_A* 2v9o_A 2v9e_A 2v9f_A 2v9i_A 2v29_A 2v2a_A* 2v2b_A
Probab=21.39 E-value=48 Score=22.95 Aligned_cols=23 Identities=13% Similarity=0.024 Sum_probs=18.7
Q ss_pred HHHHHHHHHHHhcceeEEecCCC
Q 033095 12 SELAKLDFACKEWGFFQLVNHGV 34 (127)
Q Consensus 12 ~~~~~l~~A~~~~GFf~l~nhGi 34 (127)
+....+.+++.+.--+.+.|||+
T Consensus 192 ela~~i~~~l~~~~avll~nHG~ 214 (274)
T 2v9l_A 192 AIGQATAQEMQKHSLVLWPFHGV 214 (274)
T ss_dssp HHHHHHHHHHTTCSEEEETTTEE
T ss_pred HHHHHHHHHHccCCEEEEcCCCc
Confidence 45556888888888889999996
No 74
>1e4c_P L-fuculose 1-phosphate aldolase; aldolase (class II), bacterial L-fucose metabolism; 1.66A {Escherichia coli} SCOP: c.74.1.1 PDB: 1fua_A 2fua_A 3fua_A 4fua_A* 1dzv_P 1e4b_P 1e47_P* 1e48_P* 1dzz_P 1e46_P 1dzu_P 1dzy_P 1dzx_P 1dzw_P 1e49_P 1e4a_P
Probab=20.78 E-value=41 Score=22.30 Aligned_cols=23 Identities=22% Similarity=0.200 Sum_probs=18.1
Q ss_pred HHHHHHHHHHHhcceeEEecCCC
Q 033095 12 SELAKLDFACKEWGFFQLVNHGV 34 (127)
Q Consensus 12 ~~~~~l~~A~~~~GFf~l~nhGi 34 (127)
+....+.+++.+.--+.+.|||+
T Consensus 135 ~la~~i~~~l~~~~avll~nHG~ 157 (215)
T 1e4c_P 135 ELSEHVALALKNRKATLLQHHGL 157 (215)
T ss_dssp HHHHHHHHHTSSCSEEEETTTEE
T ss_pred HHHHHHHHHhccCCEEEEcCCCc
Confidence 44556888888778888999996
No 75
>1efe_A Mini-proinsulin, M2PI; linker, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.1.1.1
Probab=20.53 E-value=42 Score=17.80 Aligned_cols=19 Identities=32% Similarity=0.566 Sum_probs=14.8
Q ss_pred HHHHHHHHHHHHhcceeEE
Q 033095 11 DSELAKLDFACKEWGFFQL 29 (127)
Q Consensus 11 ~~~~~~l~~A~~~~GFf~l 29 (127)
.+.+..|...|.+-|||+.
T Consensus 9 ~~L~daL~~vC~~rgf~~~ 27 (60)
T 1efe_A 9 SHLVEALYLVCGERGFFYT 27 (60)
T ss_dssp HHHHHHHHHHHCSSCCCCC
T ss_pred HHHHHHHHHHhCcCCcccC
Confidence 4567778888998899873
No 76
>3ocr_A Class II aldolase/adducin domain protein; PSI-2, midwest center for structural genomics, protein struc initiative, MCSG, lyase; 1.95A {Pseudomonas syringae PV}
Probab=20.39 E-value=52 Score=22.87 Aligned_cols=23 Identities=30% Similarity=0.318 Sum_probs=18.8
Q ss_pred HHHHHHHHHHHhcceeEEecCCC
Q 033095 12 SELAKLDFACKEWGFFQLVNHGV 34 (127)
Q Consensus 12 ~~~~~l~~A~~~~GFf~l~nhGi 34 (127)
+....|.+++.+.-.+.+.|||+
T Consensus 170 el~~~i~~~l~~~~avlL~nHG~ 192 (273)
T 3ocr_A 170 SERERLVADLGDKSVMILRNHGL 192 (273)
T ss_dssp HHHHHHHHHHTTCSEEEETTTEE
T ss_pred HHHHHHHHHhCcCCEEEEcCCce
Confidence 45556888888888999999996
No 77
>2z7b_A MLR6791 protein; class II aldolase superfamily, lyase; 1.90A {Mesorhizobium loti}
Probab=20.35 E-value=52 Score=22.79 Aligned_cols=23 Identities=17% Similarity=0.166 Sum_probs=18.4
Q ss_pred HHHHHHHHHHHhcceeEEecCCC
Q 033095 12 SELAKLDFACKEWGFFQLVNHGV 34 (127)
Q Consensus 12 ~~~~~l~~A~~~~GFf~l~nhGi 34 (127)
+....|.+++.+.-.+.|.|||+
T Consensus 179 ela~~ia~~l~~~~avLL~nHG~ 201 (270)
T 2z7b_A 179 DVCADIAESLGSQTVVLMARHGV 201 (270)
T ss_dssp HHHHHHHHHHTTSSEEEETTTEE
T ss_pred HHHHHHHHHhccCCEEEEcCCce
Confidence 45556888888877888999996
No 78
>2lm0_A AF4/FMR2 family member 1/protein AF-9 chimera; intrinsically disordered, nuclear protein; NMR {Homo sapiens}
Probab=20.16 E-value=23 Score=21.79 Aligned_cols=24 Identities=21% Similarity=0.166 Sum_probs=20.5
Q ss_pred HHHHHHHHHHhcceeEEecCCCCH
Q 033095 13 ELAKLDFACKEWGFFQLVNHGVIS 36 (127)
Q Consensus 13 ~~~~l~~A~~~~GFf~l~nhGi~~ 36 (127)
.+.+|..-.++.|-|.|+|+-++-
T Consensus 79 ~lq~iv~li~~tG~~~it~~tfDF 102 (125)
T 2lm0_A 79 ILQQIVNLIEETGHFHITNTTFDF 102 (125)
T ss_dssp SHHHHHHHHHTSCCEEECSSCEEE
T ss_pred HHHHHHHHHHhcCceeeecccccc
Confidence 467899999999999999997654
Done!