BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033108
(127 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8LG89|BABL_ARATH Basic blue protein OS=Arabidopsis thaliana GN=ARPN PE=1 SV=2
Length = 129
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 71/129 (55%), Positives = 90/129 (69%), Gaps = 2/129 (1%)
Query: 1 MSQGRGSARCAT--IMAALLICLLLVYIEIVDATTYTVGDSGGWSFNMASWAKGKRFKAG 58
M++GRGSA + I+ + + +LL+ + V A TYTVGDSG W+FN W KGK F+AG
Sbjct: 1 MAKGRGSASWSARAIVTLMAVSVLLLQADYVQAATYTVGDSGIWTFNAVGWPKGKHFRAG 60
Query: 59 DTLVFNYDPTLHNVVAVNRAGYRSCTAPGGAKVYSSGKDRIKLVRGQNFFICNSAGHCGS 118
D LVFNY+P +HNVV V+ Y +C P GAK Y+SGKDRI L +GQNFFICN HC S
Sbjct: 61 DVLVFNYNPRMHNVVKVDSGSYNNCKTPTGAKPYTSGKDRITLSKGQNFFICNFPNHCES 120
Query: 119 GMKIAINAM 127
MKIA+ A+
Sbjct: 121 DMKIAVTAV 129
>sp|P00303|BABL_CUCSA Basic blue protein OS=Cucumis sativus PE=1 SV=1
Length = 96
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 61/94 (64%), Positives = 77/94 (81%)
Query: 34 YTVGDSGGWSFNMASWAKGKRFKAGDTLVFNYDPTLHNVVAVNRAGYRSCTAPGGAKVYS 93
Y VG SGGW+FN SW KGKRF+AGD L+FNY+P +HNVV VN+ G+ +C P GAKVY+
Sbjct: 3 YVVGGSGGWTFNTESWPKGKRFRAGDILLFNYNPXMHNVVVVNQGGFSTCNTPAGAKVYT 62
Query: 94 SGKDRIKLVRGQNFFICNSAGHCGSGMKIAINAM 127
SG+D+IKL +GQ++FICN GHC SGMKIA+NA+
Sbjct: 63 SGRDQIKLPKGQSYFICNFPGHCQSGMKIAVNAL 96
>sp|P60496|BABL_LILLO Chemocyanin OS=Lilium longiflorum PE=1 SV=1
Length = 126
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 64/126 (50%), Positives = 87/126 (69%), Gaps = 1/126 (0%)
Query: 1 MSQGRGSARCATIMAALLICLLLVYIEIVDATTYTVGDSGGWSFNMASWAKGKRFKAGDT 60
M+QG GSA A ++ +L+ L+ E+ ++ YTVGD GGW+F + W GK F+AGD
Sbjct: 1 MAQGSGSAERALVLGVVLV-FLVFNCEVAESVVYTVGDGGGWTFGTSGWPAGKTFRAGDV 59
Query: 61 LVFNYDPTLHNVVAVNRAGYRSCTAPGGAKVYSSGKDRIKLVRGQNFFICNSAGHCGSGM 120
LVF Y+P +HNVV+V GY+SCTA G++V+ SG DRI L RG N+FIC+ GHC G+
Sbjct: 60 LVFKYNPAVHNVVSVPAGGYKSCTASPGSRVFKSGDDRITLSRGTNYFICSVPGHCQGGL 119
Query: 121 KIAINA 126
KIA+ A
Sbjct: 120 KIAVTA 125
>sp|P80728|MAVI_CUCPE Mavicyanin OS=Cucurbita pepo PE=1 SV=1
Length = 108
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 59/99 (59%), Gaps = 5/99 (5%)
Query: 31 ATTYTVGDSGGWS----FNMASWAKGKRFKAGDTLVFNYDPTLHNVVAVNRAGYRSCTAP 86
AT + VGDS GW+ ++ A WA +F GD+L+FNY+ HNV+ V++ ++SC +
Sbjct: 1 ATVHKVGDSTGWTTLVPYDYAKWASSNKFHVGDSLLFNYNNKFHNVLQVDQEQFKSCNSS 60
Query: 87 GGAKVYSSGKDRIKLVR-GQNFFICNSAGHCGSGMKIAI 124
A Y+SG D I L R G +F+C GHC G K+ I
Sbjct: 61 SPAASYTSGADSIPLKRPGTFYFLCGIPGHCQLGQKVEI 99
>sp|Q41001|BCP_PEA Blue copper protein OS=Pisum sativum PE=2 SV=1
Length = 189
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 65/115 (56%), Gaps = 6/115 (5%)
Query: 16 ALLICLLLVYIEIVD---ATTYTVGDSGGWSF--NMASWAKGKRFKAGDTLVFNYDPTLH 70
AL++C LL I + AT YTVGD+ GW + ++WA K F GD+LVFNY H
Sbjct: 6 ALVLCFLLAIINMALPSLATVYTVGDTSGWVIGGDYSTWASDKTFAVGDSLVFNYGAGAH 65
Query: 71 NVVAVNRAGYRSCTAPGGAKVYSSGKDRIKLVR-GQNFFICNSAGHCGSGMKIAI 124
V V + Y+SCT+ S+G I L + G+++FIC GH GMK++I
Sbjct: 66 TVDEVKESDYKSCTSGNSISTDSTGATTIPLKKAGKHYFICGVPGHSTGGMKLSI 120
>sp|P00302|STEL_TOXVR Stellacyanin OS=Toxicodendron vernicifluum PE=1 SV=1
Length = 107
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 50/103 (48%), Gaps = 8/103 (7%)
Query: 32 TTYTVGDSGGWSFNMA-------SWAKGKRFKAGDTLVFNYDPTLHNVVAVNRAGYRSCT 84
T YTVGDS GW WA K F GD LVF YD HNV V + Y+SC
Sbjct: 1 TVYTVGDSAGWKVPFFGDVDYDWKWASNKTFHIGDVLVFKYDRRFHNVDKVTQKNYQSCN 60
Query: 85 APGGAKVYSSGKDRIKL-VRGQNFFICNSAGHCGSGMKIAINA 126
Y++G BRI L GQ ++IC HC G K+ IN
Sbjct: 61 DTTPIASYNTGBBRINLKTVGQKYYICGVPKHCDLGQKVHINV 103
>sp|Q39131|LAML_ARATH Lamin-like protein OS=Arabidopsis thaliana GN=At5g15350 PE=1 SV=1
Length = 172
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 68/122 (55%), Gaps = 5/122 (4%)
Query: 8 ARCATIMAALLICLLLV-YIEIVDATTYTVGDSGGWS--FNMASWAKGKRFKAGDTLVFN 64
AR ++ A+++ L+ + V A YTVG++ W+ N WA+GK F GD L F
Sbjct: 2 ARFTVLITAVVLAFLMAAPMPGVTAKKYTVGENKFWNPNINYTIWAQGKHFYLGDWLYFV 61
Query: 65 YDPTLHNVVAVNRAGYRSCTAPGGAKVYS--SGKDRIKLVRGQNFFICNSAGHCGSGMKI 122
+D HN++ VN+ Y C A + ++ +G+D + L + +++++ + G C GMK+
Sbjct: 62 FDRNQHNILEVNKTDYEGCIADHPIRNWTRGAGRDIVTLNQTKHYYLLDGKGGCYGGMKL 121
Query: 123 AI 124
++
Sbjct: 122 SV 123
>sp|O80517|BCB2_ARATH Uclacyanin-2 OS=Arabidopsis thaliana GN=At2g44790 PE=1 SV=1
Length = 202
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 57/100 (57%), Gaps = 6/100 (6%)
Query: 31 ATTYTVGDSGGWSFNMASWAKGKRFKAGDTLVFNYDPTLHNVVAVNRAGYRSCTAPGGAK 90
A TYT+ + G + + WA GK F+ GD L F Y + H V V++AGY C A +
Sbjct: 29 AVTYTIEWTTG--VDYSGWATGKTFRVGDILEFKYGSS-HTVDVVDKAGYDGCDASSSTE 85
Query: 91 VYSSGKDRIKL-VRGQNFFICNSAGHC--GSGMKIAINAM 127
+S G +I L G N+FIC++ GHC GMK+A+N +
Sbjct: 86 NHSDGDTKIDLKTVGINYFICSTPGHCRTNGGMKLAVNVV 125
>sp|Q9SK27|ENL1_ARATH Early nodulin-like protein 1 OS=Arabidopsis thaliana GN=At2g25060
PE=1 SV=2
Length = 182
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 57/114 (50%), Gaps = 8/114 (7%)
Query: 19 ICLLLVYIEIVDATTYTVG-DSGGW------SFNMASWAKGKRFKAGDTLVFNYDPTLHN 71
I L+ + A TVG SG W S++ WA+ RFK GD +VF Y+ +
Sbjct: 16 IFSLIFLFSLAAANEVTVGGKSGDWKIPPSSSYSFTEWAQKARFKVGDFIVFRYESGKDS 75
Query: 72 VVAVNRAGYRSCTAPGGAKVYSSGKDRIKLVR-GQNFFICNSAGHCGSGMKIAI 124
V+ V + Y SC Y+ G+ ++KL R G +FI + GHC G K+++
Sbjct: 76 VLEVTKEAYNSCNTTNPLANYTDGETKVKLDRSGPFYFISGANGHCEKGQKLSL 129
>sp|Q8LC95|ENL3_ARATH Early nodulin-like protein 3 OS=Arabidopsis thaliana GN=At5g25090
PE=1 SV=2
Length = 186
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 58/123 (47%), Gaps = 7/123 (5%)
Query: 12 TIMAALLICLLLVYIEIVDATTYTVGDSGGW------SFNMASWAKGKRFKAGDTLVFNY 65
T++A + L+ + G + W S ++ WA+ RF+ GDTLV+ Y
Sbjct: 5 TLVATFFLIFFLLTNLVCSKEIIVGGKTSSWKIPSSPSESLNKWAESLRFRVGDTLVWKY 64
Query: 66 DPTLHNVVAVNRAGYRSCTAPGGAKVYSSGKDRIKLVR-GQNFFICNSAGHCGSGMKIAI 124
D +V+ V + Y +C A YS+G ++KL R G FFI S +C G K+ I
Sbjct: 65 DEEKDSVLQVTKDAYINCNTTNPAANYSNGDTKVKLERSGPYFFISGSKSNCVEGEKLHI 124
Query: 125 NAM 127
M
Sbjct: 125 VVM 127
>sp|Q02917|NO552_SOYBN Early nodulin-55-2 OS=Glycine max GN=ENOD55-2 PE=2 SV=1
Length = 187
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 58/123 (47%), Gaps = 12/123 (9%)
Query: 11 ATIMAALLICLLLVYIEIVDATTYTVGDSG-GWSF------NMASWAKGKRFKAGDTLVF 63
+ + L +CLL I +A Y VG S W F +++ WA RFK GDTL+F
Sbjct: 9 SPFLVMLAMCLL---ISTSEAEKYVVGGSEKSWKFPLSKPDSLSHWANSHRFKIGDTLIF 65
Query: 64 NYDPTLHNVVAVNRAGYRSCTAPGGAK-VYSSGKDRIKLVR-GQNFFICNSAGHCGSGMK 121
Y+ +V N Y C G V++ G ++ L + G FI + HC G+K
Sbjct: 66 KYEKRTESVHEGNETDYEGCNTVGKYHIVFNGGNTKVMLTKPGFRHFISGNQSHCQMGLK 125
Query: 122 IAI 124
+A+
Sbjct: 126 LAV 128
>sp|P93328|NO16_MEDTR Early nodulin-16 OS=Medicago truncatula GN=ENOD16 PE=3 SV=1
Length = 180
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 57/125 (45%), Gaps = 9/125 (7%)
Query: 8 ARCATIMAALLICLLLVYIEIVDATTYTVGDS-GGWSFNMAS------WAKGKRFKAGDT 60
A + I+ ++ + L+ I ++T Y +GDS W + S WA F GDT
Sbjct: 2 ASSSPILLMIIFSMWLL-ISHSESTDYLIGDSHNSWKVPLPSRRAFARWASAHEFTVGDT 60
Query: 61 LVFNYDPTLHNVVAVNRAGYRSCTAPGGAKVYSSGKDRIKLVR-GQNFFICNSAGHCGSG 119
++F YD +V VN Y C G + G ++ L + G FI + HC G
Sbjct: 61 ILFEYDNETESVHEVNEHDYIMCHTNGEHVEHHDGNTKVVLDKIGVYHFISGTKRHCKMG 120
Query: 120 MKIAI 124
+K+A+
Sbjct: 121 LKLAV 125
>sp|P29602|CPC_CUCSA Cucumber peeling cupredoxin OS=Cucumis sativus PE=1 SV=3
Length = 137
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 55/106 (51%), Gaps = 10/106 (9%)
Query: 31 ATTYTVGDSGGWSFN-----MASWAKGKRFKAGDTLVFNYDPTLHNVVAVN-RAGYRSC- 83
+T + VGD+ GWS + WA GK F+ GD+L FN+ HNV + + + +C
Sbjct: 2 STVHIVGDNTGWSVPSSPNFYSQWAAGKTFRVGDSLQFNFPANAHNVHEMETKQSFDACN 61
Query: 84 --TAPGGAKVYSSGKDRIKLVRGQNFFICNSAGHCGSGMKIAINAM 127
+ + S +R+ + G ++F+C HC +G K++IN +
Sbjct: 62 FVNSDNDVERTSPVIERLDEL-GMHYFVCTVGTHCSNGQKLSINVV 106
>sp|Q07488|BCB1_ARATH Blue copper protein OS=Arabidopsis thaliana GN=BCB PE=1 SV=2
Length = 196
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 46/100 (46%), Gaps = 6/100 (6%)
Query: 34 YTVGDSGGWSFNM-----ASWAKGKRFKAGDTLVFNYDPTLHNVVAVNRAGYRSCTAPGG 88
Y VGD W+ M +WA GK F+ GD L F++ H+V V+ A + +C
Sbjct: 25 YDVGDDTEWTRPMDPEFYTTWATGKTFRVGDELEFDFAAGRHDVAVVSEAAFENCEKEKP 84
Query: 89 AKVYSSGKDRIKL-VRGQNFFICNSAGHCGSGMKIAINAM 127
+ +I L G +FIC HC G K++I +
Sbjct: 85 ISHMTVPPVKIMLNTTGPQYFICTVGDHCRFGQKLSITVV 124
>sp|P93329|NO20_MEDTR Early nodulin-20 OS=Medicago truncatula GN=ENOD20 PE=3 SV=1
Length = 268
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 56/130 (43%), Gaps = 11/130 (8%)
Query: 6 GSARCATIMAALLICLLLVYIEIVDATTYTVGDS-GGWSFNMAS------WAKGKRFKAG 58
S+ +M I +L+ Y E +T Y VGDS W F + + WA +F G
Sbjct: 2 SSSSPILLMFIFSIWMLISYSE---STDYLVGDSENSWKFPLPTRHALTRWASNYQFIVG 58
Query: 59 DTLVFNYDPTLHNVVAVNRAGYRSCTAPGGAKVYSSGKDRIKLVR-GQNFFICNSAGHCG 117
DT+ F Y+ +V V Y C G + G + L + G + FI HC
Sbjct: 59 DTITFQYNNKTESVHEVEEEDYDRCGIRGEHVDHYDGNTMVVLKKTGIHHFISGKKRHCR 118
Query: 118 SGMKIAINAM 127
G+K+A+ M
Sbjct: 119 LGLKLAVVVM 128
>sp|Q9T076|ENL2_ARATH Early nodulin-like protein 2 OS=Arabidopsis thaliana GN=At4g27520
PE=1 SV=1
Length = 349
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 53/113 (46%), Gaps = 6/113 (5%)
Query: 17 LLICLLLVYIEIVDATTYTVGDSGGW----SFNMASWAKGKRFKAGDTLVFNYDPTLHNV 72
+L+ L ++ I +A + VG SG W N SW+ RF DTL F+Y +V
Sbjct: 15 ILLSLSTLFT-ISNARKFNVGGSGAWVTNPPENYESWSGKNRFLVHDTLYFSYAKGADSV 73
Query: 73 VAVNRAGYRSCTAPGGAKVYSSGKDRIKLVR-GQNFFICNSAGHCGSGMKIAI 124
+ VN+A Y +C K G I L R G +FI + +C G K+ +
Sbjct: 74 LEVNKADYDACNTKNPIKRVDDGDSEISLDRYGPFYFISGNEDNCKKGQKLNV 126
>sp|P42849|UMEC_ARMRU Umecyanin OS=Armoracia rusticana PE=1 SV=1
Length = 115
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Query: 48 SWAKGKRFKAGDTLVFNYDPTLHNVVAVNRAGYRSCTAPGGAKVYSSGKDRIKL-VRGQN 106
+WA GK F+ GD L F++ +H+V V + + +C ++ +I L G
Sbjct: 22 TWATGKTFRVGDELEFDFAAGMHDVAVVTKDAFDNCKKENPISHMTTPPVKIMLNTTGPQ 81
Query: 107 FFICNSAGHCGSGMKIAINAM 127
++IC HC G K++IN +
Sbjct: 82 YYICTVGDHCRVGQKLSINVV 102
>sp|Q5JNJ5|ENL1_ORYSJ Early nodulin-like protein 1 OS=Oryza sativa subsp. japonica
GN=ENODL1 PE=1 SV=1
Length = 237
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 56/138 (40%), Gaps = 16/138 (11%)
Query: 1 MSQGRGSARCATIMAALLICLLLVYIEIVDATTYTVGDSGGWSFNMAS----WAKGKRFK 56
M R A MA L + + E A + G GW + A WA+ RF+
Sbjct: 1 MEASRRWPYAAWFMAVLGLVAVFSSSE---AYVFYAGGRDGWVVDPAESFNYWAERNRFQ 57
Query: 57 AGDTLVFNYDPTL-HNVVAVNRAGYRSCTAPGGAKVY-----SSGKDRIKLVR-GQNFFI 109
DT+VF +D + +V+ V + +C+ G V ++G+ + R G FFI
Sbjct: 58 VNDTIVFLHDDEVGGSVLQVTEGDFDTCST--GNPVQRLEDVAAGRSVFRFDRSGPFFFI 115
Query: 110 CNSAGHCGSGMKIAINAM 127
C G K+ I M
Sbjct: 116 SGDEDRCQKGQKLYIIVM 133
>sp|P00304|MPAA3_AMBEL Pollen allergen Amb a 3 OS=Ambrosia artemisiifolia var. elatior
PE=1 SV=2
Length = 101
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 37/87 (42%), Gaps = 8/87 (9%)
Query: 34 YTVG--DSGGWSFN-----MASWAKGKRFKAGDTLVFNYDPTLHNVVAVNR-AGYRSCTA 85
Y VG + GGW A W+ ++FK D L FN+ +V V R Y +C
Sbjct: 4 YLVGGPELGGWKLQSDPRAYALWSARQQFKTTDVLWFNFTTGEDSVAEVWREEAYHACDI 63
Query: 86 PGGAKVYSSGKDRIKLVRGQNFFICNS 112
++ G DR L+ + FIC
Sbjct: 64 KDPIRLEPGGPDRFTLLTPGSHFICTK 90
>sp|Q05544|NO551_SOYBN Early nodulin-55-1 (Fragment) OS=Glycine max GN=ENOD55-1 PE=2 SV=1
Length = 137
Score = 36.2 bits (82), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 2/65 (3%)
Query: 65 YDPTLHNVVAVNRAGYRSCTAPGGAKV-YSSGKDRIKLVR-GQNFFICNSAGHCGSGMKI 122
YD +V VN Y C G V ++ G ++ L + G FI + HC G+K+
Sbjct: 2 YDERTESVHEVNETDYEQCNTVGKEHVLFNDGNTKVMLTKSGFRHFISGNQSHCQMGLKL 61
Query: 123 AINAM 127
+ M
Sbjct: 62 MVVVM 66
>sp|B8DW15|RL23_BIFA0 50S ribosomal protein L23 OS=Bifidobacterium animalis subsp. lactis
(strain AD011) GN=rplW PE=3 SV=1
Length = 98
Score = 32.3 bits (72), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
Query: 23 LVYIEIVDATTYTVGDSGGWSFNMASWAKGKRFKAGDTLVFNYDPTLHNVVAVNRAGYRS 82
++ +V +Y + D G ++F +A A + K +F T NV +NRAG R+
Sbjct: 11 IILKPVVSEKSYALSDMGQYTFVVAPNANKVQIKQAIEEIFKVKVT--NVNTLNRAGKRT 68
Query: 83 CTAPGGAKVYSSGKDRIKLVRGQNFFI 109
T G + + + + + GQ+ I
Sbjct: 69 RTRTGYGRRVNQKRAIVTVAEGQSIDI 95
>sp|B7GND8|RL23_BIFLS 50S ribosomal protein L23 OS=Bifidobacterium longum subsp. infantis
(strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 /
S12) GN=rplW PE=3 SV=1
Length = 98
Score = 30.4 bits (67), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 2/82 (2%)
Query: 28 IVDATTYTVGDSGGWSFNMASWAKGKRFKAGDTLVFNYDPTLHNVVAVNRAGYRSCTAPG 87
+V +Y D G ++F +A A + K +F T NV +NRAG + T G
Sbjct: 16 VVSEKSYAASDRGQYTFVVAPDANKVQIKQAIEEIFKVKVT--NVNTLNRAGKKQRTRTG 73
Query: 88 GAKVYSSGKDRIKLVRGQNFFI 109
+ S + + + GQ I
Sbjct: 74 FGQRASQKRAIVTVAEGQTIDI 95
>sp|Q8G415|RL23_BIFLO 50S ribosomal protein L23 OS=Bifidobacterium longum (strain NCC
2705) GN=rplW PE=3 SV=1
Length = 98
Score = 30.4 bits (67), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 2/82 (2%)
Query: 28 IVDATTYTVGDSGGWSFNMASWAKGKRFKAGDTLVFNYDPTLHNVVAVNRAGYRSCTAPG 87
+V +Y D G ++F +A A + K +F T NV +NRAG + T G
Sbjct: 16 VVSEKSYAASDRGQYTFVVAPDANKVQIKQAIEEIFKVKVT--NVNTLNRAGKKQRTRTG 73
Query: 88 GAKVYSSGKDRIKLVRGQNFFI 109
+ S + + + GQ I
Sbjct: 74 FGQRASQKRAIVTVAEGQTIDI 95
>sp|B3DQ15|RL23_BIFLD 50S ribosomal protein L23 OS=Bifidobacterium longum (strain DJO10A)
GN=rplW PE=3 SV=1
Length = 98
Score = 30.4 bits (67), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 2/82 (2%)
Query: 28 IVDATTYTVGDSGGWSFNMASWAKGKRFKAGDTLVFNYDPTLHNVVAVNRAGYRSCTAPG 87
+V +Y D G ++F +A A + K +F T NV +NRAG + T G
Sbjct: 16 VVSEKSYAASDRGQYTFVVAPDANKVQIKQAIEEIFKVKVT--NVNTLNRAGKKQRTRTG 73
Query: 88 GAKVYSSGKDRIKLVRGQNFFI 109
+ S + + + GQ I
Sbjct: 74 FGQRASQKRAIVTVAEGQTIDI 95
>sp|Q4L8M0|HSSS_STAHJ Heme sensor protein HssS OS=Staphylococcus haemolyticus (strain
JCSC1435) GN=hssS PE=3 SV=1
Length = 456
Score = 30.4 bits (67), Expect = 3.8, Method: Composition-based stats.
Identities = 13/25 (52%), Positives = 19/25 (76%)
Query: 12 TIMAALLICLLLVYIEIVDATTYTV 36
T +A LLICLL + I +V A+TY++
Sbjct: 164 TFLAVLLICLLGISITLVIASTYSI 188
>sp|Q9QZ05|E2AK4_MOUSE Eukaryotic translation initiation factor 2-alpha kinase 4 OS=Mus
musculus GN=Eif2ak4 PE=1 SV=2
Length = 1648
Score = 30.0 bits (66), Expect = 5.0, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 7/54 (12%)
Query: 66 DPTLHNVVAVNRAGYRSCTAPGGAKVYSSGKDRIKLVRGQNFFICN---SAGHC 116
DP H A+ G G A+ YSSG+ R R + + +C+ S G C
Sbjct: 216 DPAGHRAAAILHGGSPDFVGNGKARTYSSGRSR----RERQYSVCSGEPSPGSC 265
>sp|B5BJ86|OPGD_SALPK Glucans biosynthesis protein D OS=Salmonella paratyphi A (strain
AKU_12601) GN=mdoD PE=3 SV=1
Length = 551
Score = 29.6 bits (65), Expect = 5.5, Method: Composition-based stats.
Identities = 12/17 (70%), Positives = 12/17 (70%)
Query: 49 WAKGKRFKAGDTLVFNY 65
W K KAGDTLVFNY
Sbjct: 394 WQPEKAIKAGDTLVFNY 410
>sp|Q5PHT4|OPGD_SALPA Glucans biosynthesis protein D OS=Salmonella paratyphi A (strain
ATCC 9150 / SARB42) GN=mdoD PE=3 SV=1
Length = 551
Score = 29.6 bits (65), Expect = 5.5, Method: Composition-based stats.
Identities = 12/17 (70%), Positives = 12/17 (70%)
Query: 49 WAKGKRFKAGDTLVFNY 65
W K KAGDTLVFNY
Sbjct: 394 WQPEKAIKAGDTLVFNY 410
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.135 0.423
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,307,540
Number of Sequences: 539616
Number of extensions: 1846415
Number of successful extensions: 3373
Number of sequences better than 100.0: 30
Number of HSP's better than 100.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 3332
Number of HSP's gapped (non-prelim): 31
length of query: 127
length of database: 191,569,459
effective HSP length: 93
effective length of query: 34
effective length of database: 141,385,171
effective search space: 4807095814
effective search space used: 4807095814
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 55 (25.8 bits)