BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>033110
MRLQSDVIRSGGFVLFIKISFLIMSNIARYCILVIVSQLNLRKSSLCLLMLSLIMMLDAQ
TTSKRLAVRKVDKFEKNIMKRGAVPETTTKKGKDYPVGPVLLGFFVFVVIGSSLFQIIRT
ATSGGMA

High Scoring Gene Products

Symbol, full name Information P value
AT1G27330 protein from Arabidopsis thaliana 2.2e-18
AT1G27350 protein from Arabidopsis thaliana 2.2e-18

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  033110
        (127 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2015969 - symbol:AT1G27330 "AT1G27330" species...   222  2.2e-18   1
TAIR|locus:2015984 - symbol:AT1G27350 "AT1G27350" species...   222  2.2e-18   1


>TAIR|locus:2015969 [details] [associations]
            symbol:AT1G27330 "AT1G27330" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0006979 "response to oxidative
            stress" evidence=IMP] EMBL:CP002684 GO:GO:0006979 UniGene:At.22230
            InterPro:IPR010580 PANTHER:PTHR15601 Pfam:PF06624 EMBL:BT002916
            EMBL:BT004351 EMBL:BT004571 EMBL:AK227499 IPI:IPI00522969
            RefSeq:NP_564277.1 RefSeq:NP_564279.1 UniGene:At.41089
            STRING:Q84K46 PaxDb:Q84K46 PRIDE:Q84K46 EnsemblPlants:AT1G27330.1
            EnsemblPlants:AT1G27350.1 GeneID:839622 GeneID:839624
            KEGG:ath:AT1G27330 KEGG:ath:AT1G27350 TAIR:At1g27330 TAIR:At1g27350
            eggNOG:KOG3491 InParanoid:Q84K46 OMA:FEKNITH PhylomeDB:Q84K46
            ProtClustDB:CLSN2698887 Genevestigator:Q84K46 Uniprot:Q84K46
        Length = 68

 Score = 222 (83.2 bits), Expect = 2.2e-18, P = 2.2e-18
 Identities = 47/67 (70%), Positives = 51/67 (76%)

Query:    61 TTSKRLAVRKVDKFEKNIMKRGAVPETTTKKGKDYXXXXXXXXXXXXXXIGSSLFQIIRT 120
             TTSKRLA RK++KF+KNI+KRG VPETTTKKGKDY              IGSSLFQIIRT
Sbjct:     2 TTSKRLADRKIEKFDKNILKRGFVPETTTKKGKDYPVGPILLGFFVFVVIGSSLFQIIRT 61

Query:   121 ATSGGMA 127
             ATSGGMA
Sbjct:    62 ATSGGMA 68


>TAIR|locus:2015984 [details] [associations]
            symbol:AT1G27350 "AT1G27350" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002684 GO:GO:0006979 UniGene:At.22230
            InterPro:IPR010580 PANTHER:PTHR15601 Pfam:PF06624 EMBL:BT002916
            EMBL:BT004351 EMBL:BT004571 EMBL:AK227499 IPI:IPI00522969
            RefSeq:NP_564277.1 RefSeq:NP_564279.1 UniGene:At.41089
            STRING:Q84K46 PaxDb:Q84K46 PRIDE:Q84K46 EnsemblPlants:AT1G27330.1
            EnsemblPlants:AT1G27350.1 GeneID:839622 GeneID:839624
            KEGG:ath:AT1G27330 KEGG:ath:AT1G27350 TAIR:At1g27330 TAIR:At1g27350
            eggNOG:KOG3491 InParanoid:Q84K46 OMA:FEKNITH PhylomeDB:Q84K46
            ProtClustDB:CLSN2698887 Genevestigator:Q84K46 Uniprot:Q84K46
        Length = 68

 Score = 222 (83.2 bits), Expect = 2.2e-18, P = 2.2e-18
 Identities = 47/67 (70%), Positives = 51/67 (76%)

Query:    61 TTSKRLAVRKVDKFEKNIMKRGAVPETTTKKGKDYXXXXXXXXXXXXXXIGSSLFQIIRT 120
             TTSKRLA RK++KF+KNI+KRG VPETTTKKGKDY              IGSSLFQIIRT
Sbjct:     2 TTSKRLADRKIEKFDKNILKRGFVPETTTKKGKDYPVGPILLGFFVFVVIGSSLFQIIRT 61

Query:   121 ATSGGMA 127
             ATSGGMA
Sbjct:    62 ATSGGMA 68


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.324   0.136   0.368    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      127        94   0.00091  102 3  10 22  0.43    29
                                                     29  0.42    31


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  531 (57 KB)
  Total size of DFA:  108 KB (2074 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  9.96u 0.19s 10.15t   Elapsed:  00:00:01
  Total cpu time:  9.96u 0.19s 10.15t   Elapsed:  00:00:01
  Start:  Fri May 10 14:34:59 2013   End:  Fri May 10 14:35:00 2013

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