BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033110
(127 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6TAW2|SERP2_MOUSE Stress-associated endoplasmic reticulum protein 2 OS=Mus musculus
GN=Serp2 PE=3 SV=2
Length = 65
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 36/53 (67%)
Query: 72 DKFEKNIMKRGAVPETTTKKGKDYPVGPVLLGFFVFVVIGSSLFQIIRTATSG 124
+K KNI +RG V +T + + YPVGP LL FVFVV GS++FQII++ G
Sbjct: 12 EKHSKNITQRGNVAKTLRPQEEKYPVGPWLLALFVFVVCGSAIFQIIQSIRMG 64
>sp|Q8N6R1|SERP2_HUMAN Stress-associated endoplasmic reticulum protein 2 OS=Homo sapiens
GN=SERP2 PE=2 SV=1
Length = 65
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 36/53 (67%)
Query: 72 DKFEKNIMKRGAVPETTTKKGKDYPVGPVLLGFFVFVVIGSSLFQIIRTATSG 124
+K KNI +RG V +T + + YPVGP LL FVFVV GS++FQII++ G
Sbjct: 12 EKHSKNITQRGNVAKTLRPQEEKYPVGPWLLALFVFVVCGSAIFQIIQSIRMG 64
>sp|Q3T073|SERP2_BOVIN Stress-associated endoplasmic reticulum protein 2 OS=Bos taurus
GN=SERP2 PE=3 SV=1
Length = 65
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 36/53 (67%)
Query: 72 DKFEKNIMKRGAVPETTTKKGKDYPVGPVLLGFFVFVVIGSSLFQIIRTATSG 124
+K KNI +RG V +T + + YPVGP LL FVFVV GS++FQII++ G
Sbjct: 12 EKHSKNITQRGNVAKTLRPQEEKYPVGPWLLALFVFVVCGSAIFQIIQSIRMG 64
>sp|Q5REZ1|SERP1_PONAB Stress-associated endoplasmic reticulum protein 1 OS=Pongo abelii
GN=SERP1 PE=3 SV=1
Length = 66
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Query: 72 DKFEKNIMKRGAVPETT-TKKGKDYPVGPVLLGFFVFVVIGSSLFQIIRT 120
+K KNI +RG V +T+ G+ VGP LL F+FVV GS++FQII++
Sbjct: 12 EKHSKNITQRGNVAKTSRNAPGEKASVGPWLLALFIFVVCGSAIFQIIQS 61
>sp|Q9R2C1|SERP1_RAT Stress-associated endoplasmic reticulum protein 1 OS=Rattus
norvegicus GN=Serp1 PE=1 SV=2
Length = 66
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Query: 72 DKFEKNIMKRGAVPETTTKKGKDYP-VGPVLLGFFVFVVIGSSLFQIIRT 120
+K KNI +RG V +T+ ++ VGP LL F+FVV GS++FQII++
Sbjct: 12 EKHSKNITQRGNVAKTSRNAPEEKASVGPWLLALFIFVVCGSAIFQIIQS 61
>sp|Q9Z1W5|SERP1_MOUSE Stress-associated endoplasmic reticulum protein 1 OS=Mus musculus
GN=Serp1 PE=3 SV=1
Length = 66
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Query: 72 DKFEKNIMKRGAVPETTTKKGKDYP-VGPVLLGFFVFVVIGSSLFQIIRT 120
+K KNI +RG V +T+ ++ VGP LL F+FVV GS++FQII++
Sbjct: 12 EKHSKNITQRGNVAKTSRNAPEEKASVGPWLLALFIFVVCGSAIFQIIQS 61
>sp|Q9Y6X1|SERP1_HUMAN Stress-associated endoplasmic reticulum protein 1 OS=Homo sapiens
GN=SERP1 PE=2 SV=1
Length = 66
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Query: 72 DKFEKNIMKRGAVPETTTKKGKDYP-VGPVLLGFFVFVVIGSSLFQIIRT 120
+K KNI +RG V +T+ ++ VGP LL F+FVV GS++FQII++
Sbjct: 12 EKHSKNITQRGNVAKTSRNAPEEKASVGPWLLALFIFVVCGSAIFQIIQS 61
>sp|Q3ZBR1|SERP1_BOVIN Stress-associated endoplasmic reticulum protein 1 OS=Bos taurus
GN=SERP1 PE=3 SV=1
Length = 66
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Query: 72 DKFEKNIMKRGAVPETTTKKGKDYP-VGPVLLGFFVFVVIGSSLFQIIRT 120
+K KNI +RG V +T+ ++ VGP LL F+FVV GS++FQII++
Sbjct: 12 EKHSKNITQRGNVAKTSRNAPEEKASVGPWLLALFIFVVCGSAIFQIIQS 61
>sp|Q553P6|SERP_DICDI Probable stress-associated endoplasmic reticulum protein
OS=Dictyostelium discoideum GN=serp PE=2 SV=1
Length = 59
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 62 TSKRLAVRKVDKFEKNIMKRGAVPETTTKKGKDYPVGPVLLGFFVFVVIGSSLFQIIR 119
+ R +K K+++NI KRG + KK + P +LGF +FVV+GS+L QI++
Sbjct: 2 SQSRTLRQKSQKYQENIEKRGVA--SPKKKEDGLNINPYVLGFIIFVVVGSTLLQILK 57
>sp|Q9LSS0|LRK17_ARATH L-type lectin-domain containing receptor kinase I.7 OS=Arabidopsis
thaliana GN=LECRK17 PE=1 SV=1
Length = 668
Score = 33.5 bits (75), Expect = 0.45, Method: Composition-based stats.
Identities = 16/35 (45%), Positives = 21/35 (60%)
Query: 77 NIMKRGAVPETTTKKGKDYPVGPVLLGFFVFVVIG 111
+I K VP ++TKK PV VLLG F+V+G
Sbjct: 266 DISKLPKVPHSSTKKKSTSPVLSVLLGLIAFIVLG 300
>sp|Q13017|RHG05_HUMAN Rho GTPase-activating protein 5 OS=Homo sapiens GN=ARHGAP5 PE=1
SV=2
Length = 1502
Score = 31.6 bits (70), Expect = 1.6, Method: Composition-based stats.
Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 14/88 (15%)
Query: 18 KISFLIMSNIARY------CILVIVSQLNLRKSSLCLLMLSLIMMLDAQTTSKRLAVRKV 71
K + L++ AR+ C +V L+ +S +I LDA T ++L V
Sbjct: 219 KKNLLVVETSARFNVNIETCFTALVQMLDKTRSKP-----KIIPYLDAYKTQRQLVVTAT 273
Query: 72 DKFEK---NIMKRGAVPETTTKKGKDYP 96
DKFEK + A +T + K K++P
Sbjct: 274 DKFEKLVQTVRDYHATWKTVSNKLKNHP 301
>sp|P97393|RHG05_MOUSE Rho GTPase-activating protein 5 OS=Mus musculus GN=Arhgap5 PE=2
SV=2
Length = 1501
Score = 29.6 bits (65), Expect = 5.4, Method: Composition-based stats.
Identities = 24/88 (27%), Positives = 39/88 (44%), Gaps = 14/88 (15%)
Query: 18 KISFLIMSNIARY------CILVIVSQLNLRKSSLCLLMLSLIMMLDAQTTSKRLAVRKV 71
K + L++ AR+ C +V L+ + +I LDA T ++L V
Sbjct: 219 KKNLLVVETSARFNVNIETCFTALVQMLDKTRGKP-----KIIPYLDAYKTQRQLVVTAT 273
Query: 72 DKFEK---NIMKRGAVPETTTKKGKDYP 96
DKFEK + A +T + K K++P
Sbjct: 274 DKFEKLVQTVRDYHATWKTVSNKLKNHP 301
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.329 0.141 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,243,255
Number of Sequences: 539616
Number of extensions: 1162235
Number of successful extensions: 3635
Number of sequences better than 100.0: 18
Number of HSP's better than 100.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 3617
Number of HSP's gapped (non-prelim): 18
length of query: 127
length of database: 191,569,459
effective HSP length: 93
effective length of query: 34
effective length of database: 141,385,171
effective search space: 4807095814
effective search space used: 4807095814
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 55 (25.8 bits)