BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033111
(127 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8GY89|SRX_ARATH Sulfiredoxin, chloroplastic/mitochondrial OS=Arabidopsis thaliana
GN=SRX PE=1 SV=1
Length = 125
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 91/127 (71%), Positives = 104/127 (81%), Gaps = 2/127 (1%)
Query: 1 MANFVVQLPKTNSFNLKRFCVSASSNGNPPGSSESRGSGPVILELPLDKIRRPLMRTRAN 60
MAN +++LP S S+S+ P S G GP+I+ELPL+KIRRPLMRTR+N
Sbjct: 1 MANLMMRLP--ISLRSFSVSASSSNGSPPVIGGSSGGVGPMIVELPLEKIRRPLMRTRSN 58
Query: 61 DQNKVKELMDSIQQIGLQVPIDVIEVDGNYYGFSGCHRYEAHQRLGLPTIRCKVRRGTKE 120
DQNKVKELMDSI+QIGLQVPIDVIEVDG YYGFSGCHRYEAHQ+LGLPTIRCK+R+GTKE
Sbjct: 59 DQNKVKELMDSIRQIGLQVPIDVIEVDGTYYGFSGCHRYEAHQKLGLPTIRCKIRKGTKE 118
Query: 121 TLRHHLR 127
TLRHHLR
Sbjct: 119 TLRHHLR 125
>sp|Q54RQ8|LVSE_DICDI BEACH domain-containing protein lvsE OS=Dictyostelium discoideum
GN=lvsE PE=4 SV=1
Length = 2192
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 52/89 (58%), Gaps = 10/89 (11%)
Query: 42 ILELPLDKIRRPLMRTRANDQNKVKELMDSIQQIGLQVP-IDVIEVDGN------YYGFS 94
+ E+P+ I RPL D+ KV LM++I+ G+++P IDV V G Y+ F
Sbjct: 10 VTEMPMSVIHRPL--PSELDEEKVLSLMETIKS-GVEIPPIDVNWVKGKDENNNYYFSFG 66
Query: 95 GCHRYEAHQRLGLPTIRCKVRRGTKETLR 123
GCHRYEA +RL L TIR ++ + T ++
Sbjct: 67 GCHRYEATKRLNLKTIRARIIKSTPSDIK 95
>sp|Q9VX10|SRX_DROME Putative sulfiredoxin OS=Drosophila melanogaster GN=CG6762 PE=1
SV=1
Length = 162
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 54/90 (60%), Gaps = 10/90 (11%)
Query: 45 LPLDKIRRPLMRTRANDQNKVKELMDSIQQIGLQ---VPIDVIEVDGN-----YYGFSGC 96
+P+ I+RP+ D+ KV+ LM++I+ + PID++ + G+ Y+ F GC
Sbjct: 66 VPMSVIQRPI--PSVLDEQKVQSLMETIKNETSEDEVPPIDLLWISGSEGGDYYFSFGGC 123
Query: 97 HRYEAHQRLGLPTIRCKVRRGTKETLRHHL 126
HR+EA++RL PTI+ K+ + T L H++
Sbjct: 124 HRFEAYKRLQRPTIKAKLVKSTLGDLYHYM 153
>sp|Q9D975|SRXN1_MOUSE Sulfiredoxin-1 OS=Mus musculus GN=Srxn1 PE=2 SV=1
Length = 136
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 47/88 (53%), Gaps = 8/88 (9%)
Query: 45 LPLDKIRRPLMRTRANDQNKVKELMDSIQQIGLQVP-IDVIEVDGN-----YYGFSGCHR 98
+P+ + RPL D KV+ L+D+I VP IDV+ + G YY F GCHR
Sbjct: 43 VPIAVLIRPLPSVL--DPAKVQSLVDTILADPDSVPPIDVLWIKGAQGGDYYYSFGGCHR 100
Query: 99 YEAHQRLGLPTIRCKVRRGTKETLRHHL 126
Y A+Q+L TI K+ R T LR +L
Sbjct: 101 YAAYQQLQRETIPAKLVRSTLSDLRMYL 128
>sp|Q9BYN0|SRXN1_HUMAN Sulfiredoxin-1 OS=Homo sapiens GN=SRXN1 PE=1 SV=2
Length = 137
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 55/107 (51%), Gaps = 8/107 (7%)
Query: 26 NGNPPGSSESRGSGPVILELPLDKIRRPLMRTRANDQNKVKELMDSIQQIGLQVP-IDVI 84
+G G S G + +PL + RPL D KV+ L+D+I++ VP IDV+
Sbjct: 25 SGGAQGGSIHSGRIAAVHNVPLSVLIRPLPSVL--DPAKVQSLVDTIREDPDSVPPIDVL 82
Query: 85 EVDGN-----YYGFSGCHRYEAHQRLGLPTIRCKVRRGTKETLRHHL 126
+ G +Y F GCHRY A+Q+L TI K+ + T LR +L
Sbjct: 83 WIKGAQGGDYFYSFGGCHRYAAYQQLQRETIPAKLVQSTLSDLRVYL 129
>sp|Q9URV9|SRX1_SCHPO Sulfiredoxin OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=srx1 PE=1 SV=1
Length = 124
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 50/109 (45%), Gaps = 21/109 (19%)
Query: 37 GSGPVILELPLDKIRRPLMRTRANDQNKVKELMDSIQ---------------QIGLQVPI 81
GS I+EL + ++ RP+ D NKV +M+++ + G P+
Sbjct: 7 GSNNNIVELDMSELIRPIPPVL--DMNKVNSMMETMTGKTPPASCGLTSEDLEAGELPPV 64
Query: 82 DVIEVDGN----YYGFSGCHRYEAHQRLGLPTIRCKVRRGTKETLRHHL 126
DV+ + Y+ F GCHR AH G +RCK+ + TLR +L
Sbjct: 65 DVLTFKKSGKPYYFAFGGCHRLRAHDEAGRKKVRCKLVNCSPNTLRLYL 113
>sp|P36077|SRX1_YEAST Sulfiredoxin OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=SRX1 PE=1 SV=1
Length = 127
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 49/111 (44%), Gaps = 30/111 (27%)
Query: 44 ELPLDKIRRPLMRTRANDQNKVKELMDSIQQI------------------GLQVPIDV-- 83
E+PL +IRRPL D K+ ++ +++ I G P+DV
Sbjct: 12 EIPLSEIRRPLAPVL--DPQKIDAMVATMKGIPTASKTCSLEQAEAAASAGELPPVDVLG 69
Query: 84 IEVDGN--YYGFSGCHRYEAHQRLGLPT------IRCKVRRGTKETLRHHL 126
+ V G YY F GCHR +A+ R T +RC+V T +R +L
Sbjct: 70 VRVKGQTLYYAFGGCHRLQAYDRRARETQNAAFPVRCRVLPATPRQIRMYL 120
>sp|O25758|PARB_HELPY Probable chromosome-partitioning protein ParB OS=Helicobacter
pylori (strain ATCC 700392 / 26695) GN=parB PE=3 SV=1
Length = 290
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 42 ILELPLDKIR-RPLMRTRANDQNKVKELMDSIQQIGLQVPIDVIEVDGNYYGFSGCHRYE 100
++EL +D++ P + ++ ++EL SI++ GL P+ V+ +G Y+ +G R
Sbjct: 33 VVELGIDEVMPNPYQPRKVFSEDSLEELAQSIKEHGLLQPVLVVSENGRYHLIAGERRLR 92
Query: 101 AHQRLGLPTIRCKVRRGTKETLRH 124
A + +PTI+ V +E +R
Sbjct: 93 ASKLAKMPTIKAIVVDIEQEKMRE 116
>sp|Q9ZK75|PARB_HELPJ Probable chromosome-partitioning protein ParB OS=Helicobacter
pylori (strain J99) GN=parB PE=3 SV=1
Length = 290
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 42 ILELPLDKIR-RPLMRTRANDQNKVKELMDSIQQIGLQVPIDVIEVDGNYYGFSGCHRYE 100
++EL +D++ P + ++ ++EL SI++ GL P+ V+ +G Y+ +G R
Sbjct: 33 VVELGIDEVMPNPYQPRKIFSEDSLEELAQSIKEHGLLQPVLVVSENGRYHLIAGERRLR 92
Query: 101 AHQRLGLPTIRCKVRRGTKETLRH 124
A + +PTI+ V +E +R
Sbjct: 93 ASKLAKMPTIKAIVVDIEQEKMRE 116
>sp|Q926W4|NOC_LISIN Nucleoid occlusion protein OS=Listeria innocua serovar 6a (strain
CLIP 11262) GN=noc PE=3 SV=1
Length = 284
Score = 35.8 bits (81), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 42 ILELPLDKIRRPLMRTRAN-DQNKVKELMDSIQQIGLQVPIDVIEVDGNYYG-FSGCHRY 99
+LELP+DKI + R DQ+K+ EL +I+ G+ PI V E++ +YY +G R+
Sbjct: 26 VLELPMDKIFPNQFQPRTVFDQDKIDELARTIRIHGVIQPIVVREMEPDYYEIIAGERRF 85
Query: 100 EAHQRLGLPTI 110
A L L I
Sbjct: 86 RAVLSLKLEKI 96
>sp|A0AMC3|NOC_LISW6 Nucleoid occlusion protein OS=Listeria welshimeri serovar 6b
(strain ATCC 35897 / DSM 20650 / SLCC5334) GN=noc PE=3
SV=1
Length = 284
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 42 ILELPLDKIRRPLMRTRAN-DQNKVKELMDSIQQIGLQVPIDVIEVDGNYYG-FSGCHRY 99
+LELP+DKI + R DQ+K+ EL +I+ G+ PI V E++ +YY +G R+
Sbjct: 26 VLELPMDKIFPNQFQPRTVFDQDKIDELARTIRIHGVIQPIVVREMEPDYYEIIAGERRF 85
Query: 100 EAHQRLGLPTI 110
A L L I
Sbjct: 86 RAVLSLELEKI 96
>sp|Q9PB63|PARB_XYLFA Probable chromosome-partitioning protein ParB OS=Xylella fastidiosa
(strain 9a5c) GN=parB PE=3 SV=1
Length = 310
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 2/102 (1%)
Query: 16 LKRFCVSASSNGNPPGSSESRGSGPVILELPLDKIRRPLMRTRAN-DQNKVKELMDSIQQ 74
L+ S + PP +E + G V+ L + +++ + R + K+ EL DSI+
Sbjct: 17 LEALLGSKGGSSVPPTVAEGQLPGEVLRTLQITQLQPSKYQPRREMSEPKLAELADSIKA 76
Query: 75 IGLQVPIDVIEVDGNYYGF-SGCHRYEAHQRLGLPTIRCKVR 115
G+ PI V E+D + + +G R+ A Q GL + VR
Sbjct: 77 QGVIQPIIVRELDVDMFEIVAGERRWRASQLAGLTEVPVLVR 118
>sp|Q87BY1|PARB_XYLFT Probable chromosome-partitioning protein ParB OS=Xylella fastidiosa
(strain Temecula1 / ATCC 700964) GN=parB PE=3 SV=1
Length = 310
Score = 33.1 bits (74), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 58 RANDQNKVKELMDSIQQIGLQVPIDVIEVDGNYYGF-SGCHRYEAHQRLGLPTIRCKVR 115
R + K+ EL DSI+ G+ PI V E+D + + +G R+ A Q GL + VR
Sbjct: 60 REMSEAKLAELADSIKAQGVIQPIIVRELDVDMFEIVAGERRWRASQLAGLTEVPVIVR 118
>sp|Q71VW9|NOC_LISMF Nucleoid occlusion protein OS=Listeria monocytogenes serotype 4b
(strain F2365) GN=noc PE=3 SV=1
Length = 284
Score = 32.3 bits (72), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 42 ILELPLDKIRRPLMRTRAN-DQNKVKELMDSIQQIGLQVPIDVIEVDGNYYG-FSGCHRY 99
+ ELP+DKI + R DQ+K+ EL +I+ G+ PI V E++ +YY +G R+
Sbjct: 26 VQELPMDKIFPNQFQPRTVFDQDKIDELARTIRIHGVIQPIVVREMEPDYYEIIAGERRF 85
Query: 100 EAHQRLGLPTI 110
A L + I
Sbjct: 86 RAVLSLEMEKI 96
>sp|C1L0C8|NOC_LISMC Nucleoid occlusion protein OS=Listeria monocytogenes serotype 4b
(strain CLIP80459) GN=noc PE=3 SV=1
Length = 284
Score = 32.3 bits (72), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 42 ILELPLDKIRRPLMRTRAN-DQNKVKELMDSIQQIGLQVPIDVIEVDGNYYG-FSGCHRY 99
+ ELP+DKI + R DQ+K+ EL +I+ G+ PI V E++ +YY +G R+
Sbjct: 26 VQELPMDKIFPNQFQPRTVFDQDKIDELARTIRIHGVIQPIVVREMEPDYYEIIAGERRF 85
Query: 100 EAHQRLGLPTI 110
A L + I
Sbjct: 86 RAVLSLEMEKI 96
>sp|B8DD20|NOC_LISMH Nucleoid occlusion protein OS=Listeria monocytogenes serotype 4a
(strain HCC23) GN=noc PE=3 SV=1
Length = 287
Score = 32.3 bits (72), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 42 ILELPLDKIRRPLMRTRAN-DQNKVKELMDSIQQIGLQVPIDVIEVDGNYYG-FSGCHRY 99
+ ELP+DKI + R DQ+K+ EL +I+ G+ PI V E++ +YY +G R+
Sbjct: 29 VQELPMDKIFPNQFQPRTVFDQDKIDELARTIRIHGVIQPIVVREMEPDYYEIIAGERRF 88
Query: 100 EAHQRLGLPTI 110
A L + I
Sbjct: 89 RAVLSLEMEKI 99
>sp|Q8Y3P1|NOC_LISMO Nucleoid occlusion protein OS=Listeria monocytogenes serovar 1/2a
(strain ATCC BAA-679 / EGD-e) GN=noc PE=3 SV=1
Length = 284
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 42 ILELPLDKIRRPLMRTRAN-DQNKVKELMDSIQQIGLQVPIDVIEVDGNYYG-FSGCHRY 99
+ ELP+DKI + R DQ+K+ EL +I+ G+ PI V E++ +YY +G R+
Sbjct: 26 VQELPMDKIFPNQFQPRTVFDQDKIDELARTIRIHGVIQPIVVREMEPDYYEIIAGERRF 85
Query: 100 EAHQRLGLPTI 110
A L + I
Sbjct: 86 RAVLSLEMEKI 96
>sp|Q68XT3|PARB_RICTY Probable chromosome-partitioning protein ParB OS=Rickettsia typhi
(strain ATCC VR-144 / Wilmington) GN=parB PE=3 SV=1
Length = 286
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 28/53 (52%), Gaps = 6/53 (11%)
Query: 61 DQNKVKELMDSIQQIGLQVPIDVIEVDGNYYGFSGCHRYEA---HQRLGLPTI 110
+ NK+KEL DSI GL PI VD N+ +G R+ A Q L +P I
Sbjct: 47 EYNKIKELADSILNNGLLQPII---VDNNFQIIAGERRWRACKLAQVLEIPVI 96
>sp|Q92JI0|PARB_RICCN Probable chromosome-partitioning protein ParB OS=Rickettsia conorii
(strain ATCC VR-613 / Malish 7) GN=parB PE=3 SV=1
Length = 286
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 7/70 (10%)
Query: 45 LPLDKIRRPLMRTRAN-DQNKVKELMDSIQQIGLQVPIDVIEVDGNYYGFSGCHRYEA-- 101
+ +DKIR + R N + +K+KEL DSI GL PI VD N+ +G R+ A
Sbjct: 30 INIDKIRPNENQPRKNFEYDKIKELADSILNNGLLQPII---VDNNFQIIAGERRWRACK 86
Query: 102 -HQRLGLPTI 110
+ L +P I
Sbjct: 87 LAKVLEIPVI 96
>sp|F1NNL1|TM231_CHICK Transmembrane protein 231 OS=Gallus gallus GN=TMEM231 PE=3 SV=2
Length = 320
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 23 ASSNGNPPGSSESRGSGPVILELPLDKIRRPLMRTRANDQNKVKELMDSIQQIGLQVPID 82
++ G PGS + + P L D++R PL+ TR D+N+ + MD + L++P+
Sbjct: 71 VATTGPGPGSFLAWSTFPAFNRLQEDRLRVPLLSTREEDKNQDGK-MDQL-HFKLELPLQ 128
Query: 83 VIE 85
E
Sbjct: 129 PTE 131
>sp|Q5REB8|ACSS3_PONAB Acyl-CoA synthetase short-chain family member 3, mitochondrial
OS=Pongo abelii GN=ACSS3 PE=2 SV=1
Length = 686
Score = 30.0 bits (66), Expect = 4.3, Method: Composition-based stats.
Identities = 15/28 (53%), Positives = 17/28 (60%)
Query: 2 ANFVVQLPKTNSFNLKRFCVSASSNGNP 29
A FV QLPKT S + R +SA NG P
Sbjct: 636 AVFVKQLPKTRSGKIPRSALSAIVNGKP 663
>sp|Q9H6R3|ACSS3_HUMAN Acyl-CoA synthetase short-chain family member 3, mitochondrial
OS=Homo sapiens GN=ACSS3 PE=1 SV=1
Length = 686
Score = 30.0 bits (66), Expect = 4.5, Method: Composition-based stats.
Identities = 15/28 (53%), Positives = 17/28 (60%)
Query: 2 ANFVVQLPKTNSFNLKRFCVSASSNGNP 29
A FV QLPKT S + R +SA NG P
Sbjct: 636 AVFVKQLPKTRSGKIPRSALSAIVNGKP 663
>sp|Q7ZTS4|K1C18_DANRE Keratin, type I cytoskeletal 18 OS=Danio rerio GN=krt18 PE=1 SV=2
Length = 431
Score = 30.0 bits (66), Expect = 5.0, Method: Composition-based stats.
Identities = 14/40 (35%), Positives = 24/40 (60%)
Query: 43 LELPLDKIRRPLMRTRANDQNKVKELMDSIQQIGLQVPID 82
LE ++ ++ L+ + N N+V EL + I Q G+QV +D
Sbjct: 203 LESEIEALKEELIFLKKNHDNEVMELRNQISQSGVQVDVD 242
>sp|Q14DH7|ACSS3_MOUSE Acyl-CoA synthetase short-chain family member 3, mitochondrial
OS=Mus musculus GN=Acss3 PE=2 SV=2
Length = 682
Score = 29.6 bits (65), Expect = 5.6, Method: Composition-based stats.
Identities = 15/28 (53%), Positives = 17/28 (60%)
Query: 2 ANFVVQLPKTNSFNLKRFCVSASSNGNP 29
A FV QLPKT S + R +SA NG P
Sbjct: 631 AVFVKQLPKTRSGKIPRSTLSALVNGKP 658
>sp|A7MB45|ACSS3_BOVIN Acyl-CoA synthetase short-chain family member 3, mitochondrial
OS=Bos taurus GN=ACSS3 PE=2 SV=1
Length = 686
Score = 29.6 bits (65), Expect = 5.6, Method: Composition-based stats.
Identities = 15/28 (53%), Positives = 17/28 (60%)
Query: 2 ANFVVQLPKTNSFNLKRFCVSASSNGNP 29
A FV QLPKT S + R +SA NG P
Sbjct: 635 AVFVKQLPKTRSGKIPRSTLSALVNGKP 662
>sp|P77874|NIFD_HERSE Nitrogenase molybdenum-iron protein alpha chain OS=Herbaspirillum
seropedicae GN=nifD PE=3 SV=1
Length = 484
Score = 29.3 bits (64), Expect = 6.9, Method: Composition-based stats.
Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 12/72 (16%)
Query: 64 KVKELMDSIQQI-----GLQV----PIDVIEVDGNYYGFSGCHRYEAHQRLGLPTIRCKV 114
K+++++D IQ++ G+ V PI +I D +YE H + +RC+
Sbjct: 131 KLEKIVDEIQELFPLNKGISVQSECPIGLIGDDIEAVSKKKSKQYEGHT---IVPVRCEG 187
Query: 115 RRGTKETLRHHL 126
RG ++L HH+
Sbjct: 188 FRGVSQSLGHHV 199
>sp|O57607|K1C18_ONCMY Keratin, type I cytoskeletal 18 OS=Oncorhynchus mykiss GN=krt18
PE=1 SV=1
Length = 438
Score = 29.3 bits (64), Expect = 8.2, Method: Composition-based stats.
Identities = 14/44 (31%), Positives = 26/44 (59%)
Query: 39 GPVILELPLDKIRRPLMRTRANDQNKVKELMDSIQQIGLQVPID 82
G + LE ++ ++ L+ + N N+V E+ + I Q G+QV +D
Sbjct: 204 GRMNLESEIEALKEELIFLKKNHDNEVMEMRNMISQSGVQVDVD 247
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.137 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,544,003
Number of Sequences: 539616
Number of extensions: 1949095
Number of successful extensions: 4818
Number of sequences better than 100.0: 33
Number of HSP's better than 100.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 4795
Number of HSP's gapped (non-prelim): 35
length of query: 127
length of database: 191,569,459
effective HSP length: 93
effective length of query: 34
effective length of database: 141,385,171
effective search space: 4807095814
effective search space used: 4807095814
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)