BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033118
(127 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q53YF3|SPC3B_ARATH Signal peptidase complex subunit 3B OS=Arabidopsis thaliana
GN=At5g27430 PE=2 SV=1
Length = 167
Score = 220 bits (560), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 107/126 (84%), Positives = 112/126 (88%)
Query: 1 MHSFGYRANALLTFAVTILALMCTIGSLSDNLNTPSPSAQIEILNINWFQKQPHGNDEVS 60
MHSFGYRANALLTFAVTILA +C I S SDN + +PSAQI+ILNINWFQKQPHGNDEVS
Sbjct: 1 MHSFGYRANALLTFAVTILAFICAIASFSDNFSNQNPSAQIQILNINWFQKQPHGNDEVS 60
Query: 61 LTLNITADLQSLFTWNTKQLFIFVAAEYETPKNALNQVSLWDAIIPAKEFAKFSIHTSNK 120
LTLNITADLQSLFTWNTKQ+F FVAAEYET KNALNQVSLWDAIIP KE AKF I SNK
Sbjct: 61 LTLNITADLQSLFTWNTKQVFAFVAAEYETSKNALNQVSLWDAIIPEKEHAKFWIQISNK 120
Query: 121 YRFIDQ 126
YRFIDQ
Sbjct: 121 YRFIDQ 126
>sp|Q9MA96|SPC3A_ARATH Signal peptidase complex subunit 3A OS=Arabidopsis thaliana
GN=At3g05230 PE=2 SV=1
Length = 167
Score = 209 bits (531), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 99/126 (78%), Positives = 111/126 (88%)
Query: 1 MHSFGYRANALLTFAVTILALMCTIGSLSDNLNTPSPSAQIEILNINWFQKQPHGNDEVS 60
MH+FGYRANALLTFAVT LA +C I S SD + +PSA+I+ILNIN F+KQ HGNDEVS
Sbjct: 1 MHTFGYRANALLTFAVTALAFICAIASFSDKFSNQNPSAEIQILNINRFKKQSHGNDEVS 60
Query: 61 LTLNITADLQSLFTWNTKQLFIFVAAEYETPKNALNQVSLWDAIIPAKEFAKFSIHTSNK 120
LTL+I+ADLQSLFTWNTKQ+F+FVAAEYETPKN+LNQVSLWDAIIPAKE AKF I SNK
Sbjct: 61 LTLDISADLQSLFTWNTKQVFVFVAAEYETPKNSLNQVSLWDAIIPAKEHAKFRIQVSNK 120
Query: 121 YRFIDQ 126
YRFIDQ
Sbjct: 121 YRFIDQ 126
>sp|P28687|SPCS3_CHICK Signal peptidase complex subunit 3 OS=Gallus gallus GN=SPC22 PE=1
SV=1
Length = 180
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 75/132 (56%), Gaps = 6/132 (4%)
Query: 1 MHSFGYRANALLTFAVTILALM---CTIGSLSDNLNTPSPSA--QIEILNINWFQKQPHG 55
M++ RAN+L F+++++A + C I + + P A ++ + N+ F
Sbjct: 1 MNTVLSRANSLFAFSLSVMAALTFGCFITTAFKERSVPVSIAVSRVTLRNVEDFTGPRER 60
Query: 56 NDEVSLTLNITADLQSLFTWNTKQLFIFVAAEYETPKNALNQVSLWDAIIPAKEFAK-FS 114
+D +T +ITADLQS+F WN KQLF++++AEY T NALNQV LWD II + + F
Sbjct: 61 SDLAFVTFDITADLQSIFDWNVKQLFLYLSAEYSTKNNALNQVVLWDKIILRGDNPRLFL 120
Query: 115 IHTSNKYRFIDQ 126
+KY F D
Sbjct: 121 KDMKSKYFFFDD 132
>sp|P61009|SPCS3_HUMAN Signal peptidase complex subunit 3 OS=Homo sapiens GN=SPCS3 PE=1
SV=1
Length = 180
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 75/132 (56%), Gaps = 6/132 (4%)
Query: 1 MHSFGYRANALLTFAVTILALM---CTIGSLSDNLNTPSP--SAQIEILNINWFQKQPHG 55
M++ RAN+L F+++++A + C I + + + P ++I + N+ F
Sbjct: 1 MNTVLSRANSLFAFSLSVMAALTFGCFITTAFKDRSVPVRLHVSRIMLKNVEDFTGPRER 60
Query: 56 NDEVSLTLNITADLQSLFTWNTKQLFIFVAAEYETPKNALNQVSLWDAIIPAKEFAKFSI 115
+D +T +ITADL+++F WN KQLF++++AEY T NALNQV LWD I+ + K +
Sbjct: 61 SDLGFITFDITADLENIFDWNVKQLFLYLSAEYSTKNNALNQVVLWDKIVLRGDNPKLLL 120
Query: 116 H-TSNKYRFIDQ 126
KY F D
Sbjct: 121 KDMKTKYFFFDD 132
>sp|P61008|SPCS3_CANFA Signal peptidase complex subunit 3 OS=Canis familiaris GN=SPCS3
PE=1 SV=1
Length = 180
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 75/132 (56%), Gaps = 6/132 (4%)
Query: 1 MHSFGYRANALLTFAVTILALM---CTIGSLSDNLNTPSP--SAQIEILNINWFQKQPHG 55
M++ RAN+L F+++++A + C I + + + P ++I + N+ F
Sbjct: 1 MNTVLSRANSLFAFSLSVMAALTFGCFITTAFKDRSVPVRLHVSRIMLKNVEDFTGPRER 60
Query: 56 NDEVSLTLNITADLQSLFTWNTKQLFIFVAAEYETPKNALNQVSLWDAIIPAKEFAKFSI 115
+D +T +ITADL+++F WN KQLF++++AEY T NALNQV LWD I+ + K +
Sbjct: 61 SDLGFITFDITADLENIFDWNVKQLFLYLSAEYSTKNNALNQVVLWDKIVLRGDNPKLLL 120
Query: 116 H-TSNKYRFIDQ 126
KY F D
Sbjct: 121 KDMKTKYFFFDD 132
>sp|Q3SZU5|SPCS3_BOVIN Signal peptidase complex subunit 3 OS=Bos taurus GN=SPCS3 PE=2 SV=1
Length = 180
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 75/132 (56%), Gaps = 6/132 (4%)
Query: 1 MHSFGYRANALLTFAVTILALM---CTIGSLSDNLNTPSP--SAQIEILNINWFQKQPHG 55
M++ RAN+L F+++++A + C I + + + P ++I + N+ F
Sbjct: 1 MNTVLSRANSLFAFSLSVMAALTFGCFITTAFKDRSVPVRLHVSRIMLKNVEDFTGPRER 60
Query: 56 NDEVSLTLNITADLQSLFTWNTKQLFIFVAAEYETPKNALNQVSLWDAIIPAKEFAKFSI 115
+D +T +ITADL+++F WN KQLF++++AEY T NALNQV LWD I+ + K +
Sbjct: 61 SDLGFITFDITADLENIFDWNVKQLFLYLSAEYSTKNNALNQVVLWDKIVLRGDNPKLLL 120
Query: 116 H-TSNKYRFIDQ 126
KY F D
Sbjct: 121 KDMKTKYFFFDD 132
>sp|Q60MW2|SPCS3_CAEBR Probable signal peptidase complex subunit 3 OS=Caenorhabditis
briggsae GN=CBG22979 PE=3 SV=1
Length = 180
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 69/132 (52%), Gaps = 6/132 (4%)
Query: 1 MHSFGYRANALLTFAVTILALMCTIGSLSDNLNTPSPSAQIEILNINWFQKQPHGNDE-- 58
MH+ RAN+LL F + ++A + LS + S +E+ +I + + D+
Sbjct: 1 MHNLLSRANSLLAFTLWVMAAVTAACFLSTVFLDYTVSNHLEVNDIKIRNVRDYATDDKQ 60
Query: 59 ---VSLTLNITADLQSLFTWNTKQLFIFVAAEYETPKNALNQVSLWDAIIP-AKEFAKFS 114
+L N+ D LF WN KQLF+++ AEY++ +NA+NQV +WD I+ A+
Sbjct: 61 ADLATLAFNLKVDFSRLFNWNVKQLFVYLVAEYKSAENAVNQVVIWDRIVERAERVVMDE 120
Query: 115 IHTSNKYRFIDQ 126
I KY F+D
Sbjct: 121 IGVKTKYYFLDD 132
>sp|P34525|SPCS3_CAEEL Probable signal peptidase complex subunit 3 OS=Caenorhabditis
elegans GN=K12H4.4 PE=1 SV=1
Length = 180
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 68/132 (51%), Gaps = 6/132 (4%)
Query: 1 MHSFGYRANALLTFAVTILALM---CTIGSLSDNLNTPSPSA--QIEILNINWFQKQPHG 55
MH+ RANALL F + ++A + C + ++ + P+ +++ N+ +
Sbjct: 1 MHNLLSRANALLAFTLWVMAAVTAACFLSTVFLDYTVPTKLTVNDVKVRNVVDYATDEQQ 60
Query: 56 NDEVSLTLNITADLQSLFTWNTKQLFIFVAAEYETPKNALNQVSLWDAIIP-AKEFAKFS 114
D +L N+ D +F WN KQLF+++ AEY++ N +NQV LWD I+ A
Sbjct: 61 ADLATLNFNLKVDFSKIFNWNVKQLFVYLVAEYKSKVNEVNQVVLWDRIVERADRVVMDE 120
Query: 115 IHTSNKYRFIDQ 126
I +KY F+D
Sbjct: 121 IGVKSKYYFLDD 132
>sp|Q9D365|SPCS3_MOUSE Signal peptidase complex subunit 3 OS=Mus musculus GN=Spcs3 PE=2
SV=1
Length = 180
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 73/132 (55%), Gaps = 6/132 (4%)
Query: 1 MHSFGYRANALLTFAVTILA---LMCTIGSLSDNLNTPSP--SAQIEILNINWFQKQPHG 55
M+S RAN+L F ++++A L C + + + + P ++I + + F
Sbjct: 1 MNSLLSRANSLFAFTLSVMAALTLGCILTTAFKDRSAPVRLHVSRILLKKVEDFTGPRKK 60
Query: 56 NDEVSLTLNITADLQSLFTWNTKQLFIFVAAEYETPKNALNQVSLWDAIIPAKEFAKFSI 115
+D +T +I+ADL+ F WN KQLF++++AEY T NA+NQV LWD I+ E K ++
Sbjct: 61 SDLGFITFHISADLEKTFDWNVKQLFLYLSAEYSTKSNAVNQVVLWDKILLRGENPKLNL 120
Query: 116 H-TSNKYRFIDQ 126
+KY F D
Sbjct: 121 KDVKSKYFFFDD 132
>sp|Q9LGB4|SPCS3_ORYSJ Probable signal peptidase complex subunit 3 OS=Oryza sativa subsp.
japonica GN=Os01g0131800 PE=3 SV=2
Length = 147
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 61/126 (48%), Gaps = 21/126 (16%)
Query: 1 MHSFGYRANALLTFAVTILALMCTIGSLSDNLNTPSPSAQIEILNINWFQKQPHGNDEVS 60
MHS+ R T A +L C S D + PS AQ + IN F KQ +GND+V
Sbjct: 1 MHSWVQRLLTTATTAALLLLAACCAASALDAFHVPSVQAQAHVTKINRFHKQLNGNDKV- 59
Query: 61 LTLNITADLQSLFTWNTKQLFIFVAAEYETPKNALNQVSLWDAIIPAKEFAKFSIHTSNK 120
F+F+ AEYE KN+LNQVSLWD IIP K+ A + +K
Sbjct: 60 --------------------FVFLTAEYENSKNSLNQVSLWDHIIPDKDKANLQVEVKSK 99
Query: 121 YRFIDQ 126
Y IDQ
Sbjct: 100 YPLIDQ 105
>sp|Q568Z4|SPCS3_RAT Signal peptidase complex subunit 3 OS=Rattus norvegicus GN=Spcs3
PE=2 SV=1
Length = 180
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 73/132 (55%), Gaps = 6/132 (4%)
Query: 1 MHSFGYRANALLTFAVTILA---LMCTIGSLSDNLNTPSP--SAQIEILNINWFQKQPHG 55
M++ RAN+L F ++++A L C + + + + P ++I + + F
Sbjct: 1 MNTLLSRANSLFAFTLSVMAALTLGCILTTAFKDRSAPVRLHVSRILLKKVEDFTGPRKK 60
Query: 56 NDEVSLTLNITADLQSLFTWNTKQLFIFVAAEYETPKNALNQVSLWDAIIPAKEFAKFSI 115
+D +T +I+ADL+ F WN KQLF++++AEY T NA+NQV LWD I+ E K ++
Sbjct: 61 SDLGFITFHISADLEKTFDWNVKQLFLYLSAEYSTKSNAVNQVVLWDKILLRGENPKLNL 120
Query: 116 H-TSNKYRFIDQ 126
+KY F D
Sbjct: 121 KDVKSKYFFFDD 132
>sp|Q9VCA9|SPCS3_DROME Signal peptidase complex subunit 3 OS=Drosophila melanogaster
GN=Spase22-23 PE=2 SV=1
Length = 179
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 69/132 (52%), Gaps = 6/132 (4%)
Query: 1 MHSFGYRANALLTFAVTILALM---CTIGSLSDNLNTPSPSAQIEIL--NINWFQKQPHG 55
MH+ R NA + + +++LA + C + ++ + T + + +L N+ +
Sbjct: 1 MHTVLTRGNATVAYTLSVLACLTFSCFLSTVFLDYRTDANINTVRVLVKNVPDYGASREK 60
Query: 56 NDEVSLTLNITADLQSLFTWNTKQLFIFVAAEYETPKNALNQVSLWDAIIPAKEFAKFSI 115
+D +T ++ +L +F WN KQLF+++ AEY+TP N LNQV LWD II + A
Sbjct: 61 HDLGFVTFDLQTNLTGIFNWNVKQLFLYLTAEYQTPANQLNQVVLWDKIILRGDNAVLDF 120
Query: 116 HTSN-KYRFIDQ 126
N KY F D
Sbjct: 121 KNMNTKYYFWDD 132
>sp|B0G180|SPCS3_DICDI Signal peptidase complex subunit 3 OS=Dictyostelium discoideum
GN=spcs3 PE=3 SV=1
Length = 170
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 69/127 (54%), Gaps = 3/127 (2%)
Query: 1 MHSFGYRANALLTFAVTILALMCTIGSLSDNLNTPSPSAQIEILNINWFQKQPHGNDEVS 60
MHS RAN ++ F +L + + LS + I++ I+ F Q N E S
Sbjct: 1 MHSLSQRANTIVCFGGIVLVGVLLLNVLSRAFFSDHVDVDIKLNEIHRFNTQR--NFEYS 58
Query: 61 -LTLNITADLQSLFTWNTKQLFIFVAAEYETPKNALNQVSLWDAIIPAKEFAKFSIHTSN 119
+++++ A+L+ LF WNTK LF++V AEY T +N L+QV +WD I+ K A +
Sbjct: 59 FISIDLDANLEPLFNWNTKMLFLYVTAEYRTKQNVLSQVVVWDHILTEKSKANIHEKRLS 118
Query: 120 KYRFIDQ 126
KY I+Q
Sbjct: 119 KYPIINQ 125
>sp|Q6CRY8|SCP3_KLULA Microsomal signal peptidase subunit 3 OS=Kluyveromyces lactis
(strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 /
NRRL Y-1140 / WM37) GN=SPC3 PE=3 SV=1
Length = 189
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 46/72 (63%), Gaps = 4/72 (5%)
Query: 58 EVS-LTLNITADLQSLFTWNTKQLFIFVAAEYETPKN--ALNQVSLWDAIIPAKEFAKFS 114
EVS + N D LF WNTKQ+F +V AEYE +N +N++++WD IIP+++ A F+
Sbjct: 70 EVSKIRFNADFDFSRLFNWNTKQVFAYVTAEYEGDENPHTMNEITIWDKIIPSRDNATFT 129
Query: 115 IHTSN-KYRFID 125
+ + KY+ D
Sbjct: 130 LSDIDAKYQLWD 141
>sp|Q6BPD6|SPC3_DEBHA Microsomal signal peptidase subunit 3 OS=Debaryomyces hansenii
(strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 /
IGC 2968) GN=SPC3 PE=3 SV=2
Length = 190
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 70/137 (51%), Gaps = 18/137 (13%)
Query: 4 FGYRANALLTFAVTILALMCTIGSL----SDN---LNTPSPS---AQIEI---LNINWFQ 50
F Y AN LT ++ I+A + + SL S+N L T S S Q+ + N
Sbjct: 8 FQYAANQALTSSI-IIAGIVIVSSLLQLYSNNAWSLGTTSISNIKPQVSLKHSFNYGSVN 66
Query: 51 KQPHGNDEVSLTLNITADLQSLFTWNTKQLFIFVAAEYETPKN-ALNQVSLWDAIIPAKE 109
++P N + L DL LF WNTKQLF+++ AEY + + N+++ WD II +KE
Sbjct: 67 RKPKENSRIQFDLE--TDLSPLFNWNTKQLFVYLTAEYPGKSDGSSNKITYWDKIITSKE 124
Query: 110 FAKFSI-HTSNKYRFID 125
A S+ + +KY D
Sbjct: 125 DAVLSLKNQKSKYSVWD 141
>sp|Q6C4R5|SPC3_YARLI Microsomal signal peptidase subunit 3 OS=Yarrowia lipolytica
(strain CLIB 122 / E 150) GN=SPC3 PE=3 SV=1
Length = 185
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 44/73 (60%), Gaps = 2/73 (2%)
Query: 55 GNDEVSLTLNITADLQSLFTWNTKQLFIFVAAEYETPKNAL-NQVSLWDAIIPAKEFAKF 113
G + V+L ++ ADL LF WNTK +F ++ A Y+ ++ + N++++WD II K+ +
Sbjct: 70 GKENVALKFDLDADLSPLFNWNTKLVFAYLTATYDGKRDDIVNEITIWDQIITDKDDSHI 129
Query: 114 SIHTSN-KYRFID 125
+ +N KY D
Sbjct: 130 KLKGANSKYSLYD 142
>sp|Q12133|SPC3_YEAST Signal peptidase complex subunit SPC3 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=SPC3 PE=1 SV=1
Length = 184
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 40/66 (60%)
Query: 51 KQPHGNDEVSLTLNITADLQSLFTWNTKQLFIFVAAEYETPKNALNQVSLWDAIIPAKEF 110
++ + + + ++ DL LF WNTKQ+F+++ AEY + + ++V+ WD II +K+
Sbjct: 64 QRGKAKENMKIKFDLNTDLTPLFNWNTKQVFVYLTAEYNSTEKITSEVTFWDKIIKSKDD 123
Query: 111 AKFSIH 116
A ++
Sbjct: 124 AVIDVN 129
>sp|Q10259|SPC3_SCHPO Probable microsomal signal peptidase subunit 3
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=spc3 PE=3 SV=1
Length = 185
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 33/52 (63%)
Query: 61 LTLNITADLQSLFTWNTKQLFIFVAAEYETPKNALNQVSLWDAIIPAKEFAK 112
+ N+ ADL L+ WNTK + +++ A Y T K+ NQV +WD I+ + E +K
Sbjct: 71 VKFNMDADLSELWDWNTKHVVVYLVASYSTEKHEKNQVVVWDKILSSPEESK 122
>sp|Q865X3|IL13_LAMGL Interleukin-13 OS=Lama glama GN=IL13 PE=2 SV=1
Length = 136
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Query: 18 ILALMCTIGSLSDNLNTPSPSAQIEIL----NINWFQKQPHGNDEVSLTLNITADL 69
++A C IG L+ + TPSP A E++ NI QK P N + ++N+T +
Sbjct: 8 VIAFTC-IGGLASPVPTPSPKALKELIEELVNITQNQKAPLCNGSMVWSINLTTSM 62
>sp|Q865W5|IL13_CAMBA Interleukin-13 OS=Camelus bactrianus GN=IL13 PE=2 SV=1
Length = 136
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Query: 18 ILALMCTIGSLSDNLNTPSPSAQIEIL----NINWFQKQPHGNDEVSLTLNITADL 69
++A C IG L+ + TPSP A E++ NI QK P N + ++N+T +
Sbjct: 8 VIAFTC-IGGLASPVPTPSPKALKELIEELVNITQNQKAPLCNGSMVWSINLTTSM 62
>sp|Q47LM9|COAA_THEFY Pantothenate kinase OS=Thermobifida fusca (strain YX) GN=coaA PE=3
SV=1
Length = 314
Score = 30.0 bits (66), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 19/89 (21%), Positives = 39/89 (43%), Gaps = 4/89 (4%)
Query: 43 ILNINWFQKQPHGN----DEVSLTLNITADLQSLFTWNTKQLFIFVAAEYETPKNALNQV 98
+ IN Q P G D +L + A ++ + +W + +E P++ + +
Sbjct: 199 VEGINVLQPPPPGRLALADFFDFSLYVDARVEHIRSWYLNRFLELRRTAFEDPRSYFHAM 258
Query: 99 SLWDAIIPAKEFAKFSIHTSNKYRFIDQV 127
+ + AKEFA + HT N+ ++ +
Sbjct: 259 ATSASEEEAKEFAMHTWHTINEVNLVENI 287
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.132 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,204,752
Number of Sequences: 539616
Number of extensions: 1500103
Number of successful extensions: 3352
Number of sequences better than 100.0: 30
Number of HSP's better than 100.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 3324
Number of HSP's gapped (non-prelim): 30
length of query: 127
length of database: 191,569,459
effective HSP length: 93
effective length of query: 34
effective length of database: 141,385,171
effective search space: 4807095814
effective search space used: 4807095814
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)