Query 033119
Match_columns 127
No_of_seqs 129 out of 1346
Neff 6.5
Searched_HMMs 29240
Date Mon Mar 25 16:27:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033119.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/033119hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2l4b_A Acyl carrier protein; i 99.8 6.5E-20 2.2E-24 120.7 5.1 85 43-127 1-88 (88)
2 3ejb_A Acyl carrier protein; p 99.8 1.1E-19 3.7E-24 122.8 6.0 84 41-124 13-96 (97)
3 2kwl_A ACP, acyl carrier prote 99.8 4.4E-19 1.5E-23 115.5 7.4 81 44-124 3-83 (84)
4 2lol_A ACP, acyl carrier prote 99.8 1.3E-18 4.3E-23 112.3 8.6 80 45-124 1-80 (81)
5 2dnw_A Acyl carrier protein; A 99.8 1.6E-18 5.3E-23 116.8 9.3 84 43-126 8-91 (99)
6 2cnr_A FAS, ACP, acyl carrier 99.8 4E-18 1.4E-22 109.8 9.9 80 45-124 2-81 (82)
7 3gzm_A Acyl carrier protein; h 99.8 9.1E-19 3.1E-23 113.5 6.7 79 47-125 2-80 (81)
8 1f80_D Acyl carrier protein; t 99.8 3.3E-19 1.1E-23 115.0 4.2 81 44-124 1-81 (81)
9 2kci_A Putative acyl carrier p 99.8 3.4E-19 1.1E-23 118.9 4.0 75 50-124 2-76 (87)
10 4dxe_H ACP, acyl carrier prote 99.8 1E-18 3.4E-23 119.2 6.0 80 45-124 21-100 (101)
11 2kjs_A Putative acyl carrier p 99.7 1.2E-18 4.1E-23 116.0 5.4 75 52-126 4-78 (87)
12 2l9f_A CALE8, meacp; transfera 99.7 2.7E-18 9.3E-23 117.7 6.9 77 49-126 13-91 (102)
13 1x3o_A Acyl carrier protein; s 99.7 5.6E-18 1.9E-22 108.5 7.0 79 46-124 1-79 (80)
14 1klp_A ACP, ACPM, meromycolate 99.7 1E-17 3.6E-22 115.7 8.0 81 45-125 2-82 (115)
15 3ce7_A Specific mitochodrial a 99.7 8.3E-18 2.8E-22 115.7 7.4 79 46-125 15-98 (107)
16 1vku_A Acyl carrier protein; T 99.7 6.2E-18 2.1E-22 115.1 6.6 81 44-125 11-91 (100)
17 2cgq_A Acyl carrier protein AC 99.7 9E-18 3.1E-22 116.9 7.0 94 24-126 8-101 (113)
18 2qnw_A Acyl carrier protein; m 99.7 1E-17 3.4E-22 108.7 6.6 79 46-124 3-81 (82)
19 2ava_A ACP I, acyl carrier pro 99.7 9.9E-18 3.4E-22 108.4 6.2 79 47-126 1-80 (82)
20 1dv5_A APO-DCP, APO-D-alanyl c 99.7 3.5E-17 1.2E-21 106.4 7.5 76 48-124 2-80 (80)
21 1l0i_A Acyl carrier protein; a 99.7 4.5E-17 1.5E-21 104.2 6.9 75 50-124 3-77 (78)
22 1af8_A Actinorhodin polyketide 99.7 5.8E-18 2E-22 110.6 2.3 79 46-125 1-83 (86)
23 2lki_A Putative uncharacterize 99.7 8.5E-17 2.9E-21 110.4 8.1 87 33-125 13-104 (105)
24 2lte_A Specialized acyl carrie 99.5 3E-18 1E-22 117.2 0.0 80 45-126 22-101 (103)
25 2jq4_A AGR_C_4658P, hypothetic 99.7 4.9E-17 1.7E-21 111.3 4.7 85 39-124 11-99 (105)
26 2kw2_A Specialized acyl carrie 99.7 5.2E-17 1.8E-21 110.1 4.7 76 50-125 3-89 (101)
27 2amw_A Hypothetical protein NE 99.6 2.1E-16 7.2E-21 102.8 6.1 75 51-125 3-82 (83)
28 1or5_A Acyl carrier protein; A 99.6 7.4E-17 2.5E-21 104.6 3.4 77 49-126 3-82 (83)
29 2ehs_A ACP, acyl carrier prote 99.6 1.2E-15 4.1E-20 96.7 6.5 75 51-125 2-76 (77)
30 2l3v_A ACP, acyl carrier prote 99.6 1.4E-16 4.8E-21 102.0 0.8 75 50-124 4-78 (79)
31 1nq4_A Oxytetracycline polyket 99.6 1.8E-15 6E-20 101.5 5.2 79 45-124 3-81 (95)
32 1fh1_A NODF, nodulation protei 99.6 2.1E-16 7.3E-21 105.1 -0.7 77 50-127 4-91 (92)
33 2afd_A Protein ASL1650; twiste 99.6 2.3E-14 8E-19 92.6 8.9 80 44-124 8-87 (88)
34 2kr5_A PKS, aflatoxin biosynth 99.5 6.3E-14 2.2E-18 91.3 7.9 79 46-125 7-87 (89)
35 2liu_A CURA; holo state, trans 99.5 1.2E-13 4.2E-18 91.1 6.7 80 44-124 15-94 (99)
36 2l22_A Mupirocin didomain acyl 99.4 1.4E-13 4.9E-18 103.1 6.9 83 42-125 18-100 (212)
37 2l22_A Mupirocin didomain acyl 99.4 6E-13 2.1E-17 99.6 9.3 80 45-125 125-204 (212)
38 2ju1_A Erythronolide synthase; 99.4 2.1E-13 7.1E-18 89.8 4.9 77 47-124 17-94 (95)
39 1dny_A Non-ribosomal peptide s 99.4 1.4E-12 4.6E-17 86.5 7.0 74 47-123 11-84 (91)
40 2cg5_B Fatty acid synthase; tr 99.4 2.1E-12 7.2E-17 86.7 7.3 70 53-124 9-79 (91)
41 4i4d_A Peptide synthetase NRPS 99.3 2.5E-12 8.5E-17 85.2 7.0 76 47-125 13-88 (93)
42 3tej_A Enterobactin synthase c 98.9 3E-09 1E-13 83.1 7.3 76 46-124 7-82 (329)
43 2cq8_A 10-formyltetrahydrofola 98.9 1.8E-09 6.1E-14 74.7 5.2 74 47-123 22-97 (110)
44 2jgp_A Tyrocidine synthetase 3 98.6 1.2E-07 4.2E-12 77.6 7.6 75 46-123 6-80 (520)
45 2fq1_A Isochorismatase; ENTB, 98.4 3.5E-07 1.2E-11 71.3 6.5 70 46-122 215-284 (287)
46 4f6l_B AUSA reductase domain p 98.3 8.7E-08 3E-12 79.1 0.0 74 47-124 42-115 (508)
47 2vsq_A Surfactin synthetase su 98.2 1.2E-06 4.3E-11 79.7 5.9 76 46-124 968-1043(1304)
48 4dg8_A PA1221; ANL superfamily 98.1 5.7E-07 2E-11 76.3 0.3 75 47-124 521-596 (620)
49 3rg2_A Enterobactin synthase c 98.0 8.1E-06 2.8E-10 68.7 6.3 70 52-124 547-616 (617)
50 2vz8_A Fatty acid synthase; tr 97.2 5.4E-05 1.8E-09 73.6 0.0 70 52-123 2125-2195(2512)
51 2px6_A Thioesterase domain; th 92.4 0.0082 2.8E-07 45.8 -2.6 37 81-117 1-37 (316)
52 1q1v_A DEK protein; winged-hel 71.0 11 0.00037 23.2 5.2 45 43-105 9-54 (70)
53 1dd4_C 50S ribosomal protein L 65.9 6.3 0.00022 21.8 3.0 20 82-101 13-32 (40)
54 1v32_A AT5G08430, hypothetical 65.7 5.2 0.00018 26.5 3.1 57 44-100 33-92 (101)
55 3s93_A Tudor domain-containing 63.6 16 0.00053 24.1 5.1 19 45-63 2-20 (102)
56 1zav_U 50S ribosomal protein L 56.1 9 0.00031 19.9 2.3 16 84-99 15-30 (30)
57 3zen_D Fatty acid synthase; tr 55.1 2.5 8.6E-05 42.6 0.0 53 51-104 1795-1848(3089)
58 1v31_A Hypothetical protein RA 51.3 3.8 0.00013 26.6 0.4 56 44-99 25-83 (93)
59 1uhr_A SWI/SNF related, matrix 51.3 5.2 0.00018 25.9 1.1 56 44-99 25-83 (93)
60 2pls_A CBS domain protein; APC 46.6 39 0.0013 20.7 4.7 34 91-124 19-53 (86)
61 2oai_A Hemolysin; PFAM03471, x 46.1 31 0.0011 21.7 4.2 34 91-124 28-61 (94)
62 3llb_A Uncharacterized protein 41.3 51 0.0018 20.1 4.6 31 91-124 19-49 (83)
63 1wot_A Putative minimal nucleo 40.7 65 0.0022 20.1 6.4 62 43-105 1-78 (98)
64 2rk5_A Putative hemolysin; str 39.7 53 0.0018 20.2 4.6 31 91-124 18-48 (87)
65 3lae_A UPF0053 protein HI0107; 38.7 47 0.0016 20.2 4.1 30 91-123 19-48 (81)
66 2p3h_A Uncharacterized CBS dom 38.5 56 0.0019 21.1 4.6 31 91-124 22-52 (101)
67 3ded_A Probable hemolysin; str 38.5 59 0.002 21.3 4.8 34 91-124 45-80 (113)
68 2r2z_A Hemolysin; APC85144, en 34.9 70 0.0024 19.8 4.6 31 91-124 26-56 (93)
69 2pli_A Uncharacterized protein 34.8 72 0.0025 19.8 4.6 31 91-124 28-58 (91)
70 2p13_A CBS domain; alpha-beta 34.8 75 0.0025 19.6 4.7 33 91-124 25-57 (90)
71 3m20_A 4-oxalocrotonate tautom 34.8 40 0.0014 19.2 3.1 25 47-71 14-38 (62)
72 2p4p_A Hypothetical protein HD 33.9 77 0.0026 19.3 4.6 32 91-124 19-51 (86)
73 3ufe_A Transcriptional antiter 33.6 25 0.00085 22.1 2.3 21 87-107 79-99 (111)
74 2opa_A Probable tautomerase YW 31.5 38 0.0013 18.8 2.6 24 47-70 15-38 (61)
75 1otf_A 4-oxalocrotonate tautom 31.3 38 0.0013 18.8 2.6 24 47-70 15-38 (62)
76 2rg8_A Programmed cell death p 30.6 38 0.0013 23.8 3.0 23 43-65 1-23 (165)
77 3abf_A 4-oxalocrotonate tautom 30.5 37 0.0013 19.0 2.5 25 47-71 16-40 (64)
78 2x4k_A 4-oxalocrotonate tautom 28.2 47 0.0016 18.2 2.6 24 47-70 18-41 (63)
79 3m21_A Probable tautomerase HP 27.8 46 0.0016 19.2 2.6 24 47-70 18-41 (67)
80 3ry0_A Putative tautomerase; o 26.9 50 0.0017 18.8 2.6 24 47-70 15-38 (65)
81 3mb2_A 4-oxalocrotonate tautom 26.6 47 0.0016 19.5 2.5 24 47-70 16-39 (72)
82 2hfk_A Pikromycin, type I poly 26.6 4.4 0.00015 30.4 -2.8 41 46-99 24-64 (319)
83 2pag_A Hypothetical protein; n 23.1 42 0.0014 22.7 2.0 18 88-105 24-41 (135)
84 3ej9_A Alpha-subunit of trans- 22.9 63 0.0021 19.3 2.6 24 47-70 16-39 (76)
85 1gyx_A YDCE, B1461, hypothetic 22.1 66 0.0023 19.0 2.6 24 47-70 16-39 (76)
86 2kxo_A Cell division topologic 21.5 70 0.0024 20.7 2.7 26 47-72 39-64 (95)
87 3rio_A PTSGHI operon antitermi 21.4 55 0.0019 23.0 2.4 21 87-107 147-167 (180)
88 1xmk_A Double-stranded RNA-spe 21.3 23 0.00078 22.2 0.3 48 44-97 5-53 (79)
89 3lph_A Protein REV; helix-loop 21.0 35 0.0012 21.2 1.1 52 7-66 13-69 (72)
90 2o3g_A Putative protein; APC85 21.0 1E+02 0.0035 19.0 3.5 32 91-124 27-59 (92)
No 1
>2l4b_A Acyl carrier protein; infectious disease, human granulocytic anaplasmosis, ssgcid, structural genomics; NMR {Anaplasma phagocytophilum}
Probab=99.79 E-value=6.5e-20 Score=120.69 Aligned_cols=85 Identities=28% Similarity=0.456 Sum_probs=79.5
Q ss_pred CCCCCHHHHHHHHHHHHHhhh---CCCCCccccCCccccccCCChhhHHHHHHHHHHHhCCcCCccccccCCcHHHHHHH
Q 033119 43 GSFLDKSEVTDRVISVVKNFQ---KVDPSKVTVNAHFQNDLGLDSLDTVEVVMALEEEFGFEIPDNEADKISTINMAVDF 119 (127)
Q Consensus 43 ~~~M~~~~I~~~I~~il~~~l---~i~~~~I~~dt~l~~dLGlDSL~~veLi~~lEeefgi~I~~~~l~~~~Tv~~Lv~~ 119 (127)
+++|+++++.++|++++++.+ ++++++++++++|.+++|+||+++++|+..||++||++|+.+++.++.|++++++|
T Consensus 1 ~~~m~~~~i~~~v~~~i~~~l~~~~~~~~~i~~d~~l~~dlglDSl~~vel~~~lE~~fgi~i~~~~~~~~~Tv~~l~~~ 80 (88)
T 2l4b_A 1 PGSMVSEEIKAQVMESVIGCLKLNDEQKQILSGTTNLAKDFNLDSLDFVDLIMSLEERFSLEISDEDAQKLETVDDICRY 80 (88)
T ss_dssp CCSSSCHHHHHHHHHHHHHHHTCCHHHHHSCCTTSCTTTTTTCCHHHHHHHHHHHHHHTTCCCCHHHHHTCCSHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHhhCCCCHhhCCCCCchhhccCCcHHHHHHHHHHHHHHHCCCcCHHHHHHcCCHHHHHHH
Confidence 357999999999999999999 88888999999996799999999999999999999999999999999999999999
Q ss_pred HHcCCCCC
Q 033119 120 IASHPQAK 127 (127)
Q Consensus 120 I~~~~~ak 127 (127)
|.++++++
T Consensus 81 i~~~~~~~ 88 (88)
T 2l4b_A 81 IASKSSDA 88 (88)
T ss_dssp HHHHSSCC
T ss_pred HHHhhccC
Confidence 99988764
No 2
>3ejb_A Acyl carrier protein; protein-protein complex, cytochrome P450 fold, carrier protein, 4-helix bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Escherichia coli} SCOP: a.28.1.1 PDB: 3ejd_A* 3eje_A*
Probab=99.79 E-value=1.1e-19 Score=122.82 Aligned_cols=84 Identities=48% Similarity=0.656 Sum_probs=75.6
Q ss_pred ccCCCCCHHHHHHHHHHHHHhhhCCCCCccccCCccccccCCChhhHHHHHHHHHHHhCCcCCccccccCCcHHHHHHHH
Q 033119 41 VRGSFLDKSEVTDRVISVVKNFQKVDPSKVTVNAHFQNDLGLDSLDTVEVVMALEEEFGFEIPDNEADKISTINMAVDFI 120 (127)
Q Consensus 41 ~~~~~M~~~~I~~~I~~il~~~l~i~~~~I~~dt~l~~dLGlDSL~~veLi~~lEeefgi~I~~~~l~~~~Tv~~Lv~~I 120 (127)
..+..++++++.++|++++++.+++++++|+++++|.++||+|||++++|+..||++||++|+.+++.++.||+++++||
T Consensus 13 ~~~~~~t~~~i~~~l~~iia~~l~~~~~~i~~d~~l~~dLGlDSL~~vel~~~lE~~fgi~i~~~~l~~~~Tv~~l~~~i 92 (97)
T 3ejb_A 13 LVPRGSHMSTIEERVKKIIGEQLGVKQEEVTNNASFVEDLGADSLDTVELVMALEEEFDTEIPDEEAEKITTVQAAIDYI 92 (97)
T ss_dssp -----CCCCCHHHHHHHHHHHHSCCCTTTSCTTCBTTTTTCCCTTHHHHHHHHHHHHTTCCCCHHHHHHCCBHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHCcCHHHCCCCCCchhhcCCCHHHHHHHHHHHHHHHCCCCCHHHHHhCCCHHHHHHHH
Confidence 34566888999999999999999999999999999977999999999999999999999999999999999999999999
Q ss_pred HcCC
Q 033119 121 ASHP 124 (127)
Q Consensus 121 ~~~~ 124 (127)
.+++
T Consensus 93 ~~~~ 96 (97)
T 3ejb_A 93 NGHQ 96 (97)
T ss_dssp HHC-
T ss_pred HHhc
Confidence 9875
No 3
>2kwl_A ACP, acyl carrier protein; structural genomics, seattle structura genomics center for infectious disease, ssgcid, lipid bindi protein; NMR {Borrelia burgdorferi}
Probab=99.78 E-value=4.4e-19 Score=115.49 Aligned_cols=81 Identities=32% Similarity=0.525 Sum_probs=77.0
Q ss_pred CCCCHHHHHHHHHHHHHhhhCCCCCccccCCccccccCCChhhHHHHHHHHHHHhCCcCCccccccCCcHHHHHHHHHcC
Q 033119 44 SFLDKSEVTDRVISVVKNFQKVDPSKVTVNAHFQNDLGLDSLDTVEVVMALEEEFGFEIPDNEADKISTINMAVDFIASH 123 (127)
Q Consensus 44 ~~M~~~~I~~~I~~il~~~l~i~~~~I~~dt~l~~dLGlDSL~~veLi~~lEeefgi~I~~~~l~~~~Tv~~Lv~~I~~~ 123 (127)
+.|+++++.++|++++++.+++++++++++++|..++|+||+++++++..||++||++++.+++.++.|++++++||.++
T Consensus 3 ~~m~~~~i~~~l~~~i~~~l~~~~~~i~~~~~l~~dlG~DSl~~vel~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~ 82 (84)
T 2kwl_A 3 GSMDNDEIFSKVRSIISEQLDKKEDEITTDSRFVEDLNADSLDIYELLYLLEEAFDDKIPENEANEFETVGDVVNFIKKR 82 (84)
T ss_dssp CCSTHHHHHHHHHHHHHHHHCCCGGGCCTTTHHHHTSSSCHHHHHHHHHHHHHHHTCCTTTTGGGGCSSHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHhCCCcccCCCCCchhhhcCCCHHHHHHHHHHHHHHHCCCcCHHHHHHCCCHHHHHHHHHHH
Confidence 57999999999999999999999999999999955999999999999999999999999999999999999999999876
Q ss_pred C
Q 033119 124 P 124 (127)
Q Consensus 124 ~ 124 (127)
+
T Consensus 83 ~ 83 (84)
T 2kwl_A 83 K 83 (84)
T ss_dssp H
T ss_pred c
Confidence 4
No 4
>2lol_A ACP, acyl carrier protein; lipid transport; NMR {Rickettsia prowazekii str}
Probab=99.77 E-value=1.3e-18 Score=112.26 Aligned_cols=80 Identities=36% Similarity=0.614 Sum_probs=76.3
Q ss_pred CCCHHHHHHHHHHHHHhhhCCCCCccccCCccccccCCChhhHHHHHHHHHHHhCCcCCccccccCCcHHHHHHHHHcCC
Q 033119 45 FLDKSEVTDRVISVVKNFQKVDPSKVTVNAHFQNDLGLDSLDTVEVVMALEEEFGFEIPDNEADKISTINMAVDFIASHP 124 (127)
Q Consensus 45 ~M~~~~I~~~I~~il~~~l~i~~~~I~~dt~l~~dLGlDSL~~veLi~~lEeefgi~I~~~~l~~~~Tv~~Lv~~I~~~~ 124 (127)
+|+++++.++|++++++.+++++++++++++|.+++|+||+++++++..||++||+++|.+++.++.|+++++++|.+++
T Consensus 1 Mm~~~~i~~~l~~ii~~~l~~~~~~i~~~~~l~~dlG~DSl~~~el~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~~ 80 (81)
T 2lol_A 1 MSTTDKIEQKVIEMVAEKLNKDKAIITTDSRFIEDLKADSLDTVELMMAIEVEYGIDIPDDEATKIKTVSDVIKYIKERQ 80 (81)
T ss_dssp CCSHHHHHHHHHHHHHHHSCCCTTTCCTTCCHHHHTTCCHHHHHHHHHHHHHHHCCCCCGGGGGGSSSHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHHHHHCCChhhCCCCCcHHHhcCCcHHHHHHHHHHHHHHHCCCCCHHHHHHcCCHHHHHHHHHHhc
Confidence 58999999999999999999998999999999669999999999999999999999999999999999999999998765
No 5
>2dnw_A Acyl carrier protein; ACP, fatty acid biosynthesis, mitochondria, NADH:ubiquinone oxidereductase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.77 E-value=1.6e-18 Score=116.82 Aligned_cols=84 Identities=49% Similarity=0.803 Sum_probs=79.3
Q ss_pred CCCCCHHHHHHHHHHHHHhhhCCCCCccccCCccccccCCChhhHHHHHHHHHHHhCCcCCccccccCCcHHHHHHHHHc
Q 033119 43 GSFLDKSEVTDRVISVVKNFQKVDPSKVTVNAHFQNDLGLDSLDTVEVVMALEEEFGFEIPDNEADKISTINMAVDFIAS 122 (127)
Q Consensus 43 ~~~M~~~~I~~~I~~il~~~l~i~~~~I~~dt~l~~dLGlDSL~~veLi~~lEeefgi~I~~~~l~~~~Tv~~Lv~~I~~ 122 (127)
-++|+++++.++|.+++++.+++++++|+++++|.+++|+|||++++|+..||++||++|+.+++.++.|++++++||.+
T Consensus 8 m~~m~~~~i~~~l~~~l~~~l~~~~~~i~~d~~l~~dlG~DSL~~vel~~~le~~fgi~i~~~~l~~~~Tv~~l~~~i~~ 87 (99)
T 2dnw_A 8 MPPLTLEGIQDRVLYVLKLYDKIDPEKLSVNSHFMKDLGLDSLDQVEIIMAMEDEFGFEIPDIDAEKLMCPQEIVDYIAD 87 (99)
T ss_dssp CCCCCHHHHHHHHHHHHHHCTTSCTTTCCTTCCCCCCCCCCHHHHHHHHHHHHHHTTCCCCHHHHTTCCSHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHhCCCHhhCCCCCchhhhcCCCHHHHHHHHHHHHHHHCCCCCHHHHHhCCCHHHHHHHHHH
Confidence 36799999999999999999999999999999996699999999999999999999999999999999999999999998
Q ss_pred CCCC
Q 033119 123 HPQA 126 (127)
Q Consensus 123 ~~~a 126 (127)
++.+
T Consensus 88 ~~~~ 91 (99)
T 2dnw_A 88 KKDV 91 (99)
T ss_dssp HCCS
T ss_pred Hhcc
Confidence 8754
No 6
>2cnr_A FAS, ACP, acyl carrier protein; polykdetide, phosphopantetheine, lipid transport; NMR {Streptomyces coelicolor} PDB: 2koo_A* 2kop_A* 2koq_A* 2kor_A* 2kos_A*
Probab=99.76 E-value=4e-18 Score=109.83 Aligned_cols=80 Identities=30% Similarity=0.541 Sum_probs=76.4
Q ss_pred CCCHHHHHHHHHHHHHhhhCCCCCccccCCccccccCCChhhHHHHHHHHHHHhCCcCCccccccCCcHHHHHHHHHcCC
Q 033119 45 FLDKSEVTDRVISVVKNFQKVDPSKVTVNAHFQNDLGLDSLDTVEVVMALEEEFGFEIPDNEADKISTINMAVDFIASHP 124 (127)
Q Consensus 45 ~M~~~~I~~~I~~il~~~l~i~~~~I~~dt~l~~dLGlDSL~~veLi~~lEeefgi~I~~~~l~~~~Tv~~Lv~~I~~~~ 124 (127)
+|+++++.+++.+++++.+++++++++++++|..++|+||+++++++..||++||+++|.+++.++.|+++++++|.+++
T Consensus 2 ~m~~~~i~~~l~~~i~~~l~~~~~~i~~~~~l~~dlG~DSl~~~~l~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~~ 81 (82)
T 2cnr_A 2 AATQEEIVAGLAEIVNEIAGIPVEDVKLDKSFTDDLDVDSLSMVEVVVAAEERFDVKIPDDDVKNLKTVGDATKYILDHQ 81 (82)
T ss_dssp CCCHHHHHHHHHHHHHHHSCCCTTTCCTTSBTTTTSCCCHHHHHHHHHHHHGGGTBCCCGGGGGTCSBHHHHHHHHHHSB
T ss_pred CCCHHHHHHHHHHHHHHHhCCCHHHCCCCcchhhccCCChHHHHHHHHHHHHHhCCCCCHHHHHHcCCHHHHHHHHHHHc
Confidence 48999999999999999999999999999999669999999999999999999999999999999999999999999875
No 7
>3gzm_A Acyl carrier protein; helix bundle, phosphopantetheine, fatty acid biosynthesis, L synthesis, transit peptide, biosynthetic protein; HET: PNS; 1.80A {Plasmodium falciparum} SCOP: a.28.1.0 PDB: 3gzl_A* 2fq0_A* 2fq2_A*
Probab=99.76 E-value=9.1e-19 Score=113.52 Aligned_cols=79 Identities=37% Similarity=0.605 Sum_probs=74.7
Q ss_pred CHHHHHHHHHHHHHhhhCCCCCccccCCccccccCCChhhHHHHHHHHHHHhCCcCCccccccCCcHHHHHHHHHcCCC
Q 033119 47 DKSEVTDRVISVVKNFQKVDPSKVTVNAHFQNDLGLDSLDTVEVVMALEEEFGFEIPDNEADKISTINMAVDFIASHPQ 125 (127)
Q Consensus 47 ~~~~I~~~I~~il~~~l~i~~~~I~~dt~l~~dLGlDSL~~veLi~~lEeefgi~I~~~~l~~~~Tv~~Lv~~I~~~~~ 125 (127)
+++++.++|++++++.+++++++++++++|.+++|+||+++++++..||++||++||.+++.++.|++++++||.++++
T Consensus 2 ~~~~i~~~l~~ii~~~l~~~~~~i~~d~~l~~dlg~DSl~~vel~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~~~ 80 (81)
T 3gzm_A 2 SLKSTFDDIKKIISKQLSVEEDKIQMNSNFTKDLGADSLDLVELIMALEEKFNVTISDQDALKINTVQDAIDYIEKNNK 80 (81)
T ss_dssp CHHHHHHHHHHHHHHHHTCCGGGCCTTCBHHHHSCCCHHHHHHHHHHHHHHHTCCCCHHHHHTCCBHHHHHHHHHHHC-
T ss_pred CHHHHHHHHHHHHHHHhCcCHHHCCCCCcchhhcCCCHHHHHHHHHHHHHHHCCCcCHHHHHHcCCHHHHHHHHHHHhc
Confidence 5789999999999999999999999999996699999999999999999999999999999999999999999998765
No 8
>1f80_D Acyl carrier protein; transferase; HET: PN2; 2.30A {Bacillus subtilis} SCOP: a.28.1.1 PDB: 2x2b_A* 1hy8_A
Probab=99.76 E-value=3.3e-19 Score=115.00 Aligned_cols=81 Identities=40% Similarity=0.659 Sum_probs=71.7
Q ss_pred CCCCHHHHHHHHHHHHHhhhCCCCCccccCCccccccCCChhhHHHHHHHHHHHhCCcCCccccccCCcHHHHHHHHHcC
Q 033119 44 SFLDKSEVTDRVISVVKNFQKVDPSKVTVNAHFQNDLGLDSLDTVEVVMALEEEFGFEIPDNEADKISTINMAVDFIASH 123 (127)
Q Consensus 44 ~~M~~~~I~~~I~~il~~~l~i~~~~I~~dt~l~~dLGlDSL~~veLi~~lEeefgi~I~~~~l~~~~Tv~~Lv~~I~~~ 123 (127)
++|+++++.+++++++++.+++++++++++++|..++|+||+++++++..||++||++++.+++.++.|++++++||.++
T Consensus 1 ~~m~~~~i~~~l~~~l~~~l~~~~~~i~~~~~l~~dlG~DSl~~vel~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~ 80 (81)
T 1f80_D 1 GPLGSADTLERVTKIIVDRLGVDEADVKLEASFKEDLGADXLDVVELVMELEDEFDMEISDEDAEKIATVGDAVNYIQNQ 80 (81)
T ss_dssp ----CCHHHHHHHHHHHHHSSCCSSCCCTTCBHHHHSCCCHHHHHHHHHHHHHHTTCCCCHHHHHHCCBHHHHHHHCC--
T ss_pred CCCCHHHHHHHHHHHHHHHHCCCHHhCCCccchHHHcCCcHHHHHHHHHHHHHHhCCccCHHHHHHCCCHHHHHHHHHhh
Confidence 47899999999999999999999999999999955999999999999999999999999999999999999999999765
Q ss_pred C
Q 033119 124 P 124 (127)
Q Consensus 124 ~ 124 (127)
+
T Consensus 81 ~ 81 (81)
T 1f80_D 81 Q 81 (81)
T ss_dssp -
T ss_pred C
Confidence 3
No 9
>2kci_A Putative acyl carrier protein; alpha, ACP, PCP, structural genomics, unknown function, PSI- 2, protein structure initiative; NMR {Geobacter metallireducens gs-15} PDB: 2kjs_A* 2lml_A* 2kwm_A*
Probab=99.76 E-value=3.4e-19 Score=118.94 Aligned_cols=75 Identities=15% Similarity=0.232 Sum_probs=71.3
Q ss_pred HHHHHHHHHHHhhhCCCCCccccCCccccccCCChhhHHHHHHHHHHHhCCcCCccccccCCcHHHHHHHHHcCC
Q 033119 50 EVTDRVISVVKNFQKVDPSKVTVNAHFQNDLGLDSLDTVEVVMALEEEFGFEIPDNEADKISTINMAVDFIASHP 124 (127)
Q Consensus 50 ~I~~~I~~il~~~l~i~~~~I~~dt~l~~dLGlDSL~~veLi~~lEeefgi~I~~~~l~~~~Tv~~Lv~~I~~~~ 124 (127)
++++++++++++.+++++++++++++|.+++||||++.++|+++||++||++||++++.++.|++++++||.+++
T Consensus 2 ~i~ekv~~il~e~l~~d~~~i~~d~~l~~dlg~DSL~~veli~~lE~eF~I~i~~ed~~~~~Tv~dlv~~I~~~~ 76 (87)
T 2kci_A 2 PTLDALTPIFRQVFDDDSIVLTRETSANDIDAWDSLSHMNLIVSLEVHYKIKFALGELQKLKNVGDLADLVDKKL 76 (87)
T ss_dssp CSHHHHHHHHHHHTTCSCCCCCTTCCSTTCCCCCSTHHHHHHHHHHHHHTCCCCHHHHTTCCSHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhCCCHHHCCCCCCcccccCCChHHHHHHHHHHHHHHCCccCHHHHHhCCCHHHHHHHHHHHH
Confidence 468899999999999999999999999988999999999999999999999999999999999999999998764
No 10
>4dxe_H ACP, acyl carrier protein; acyl-carrier-protein synthase, type II acid synthesis pathway; 2.51A {Staphylococcus aureus}
Probab=99.75 E-value=1e-18 Score=119.23 Aligned_cols=80 Identities=49% Similarity=0.672 Sum_probs=71.6
Q ss_pred CCCHHHHHHHHHHHHHhhhCCCCCccccCCccccccCCChhhHHHHHHHHHHHhCCcCCccccccCCcHHHHHHHHHcCC
Q 033119 45 FLDKSEVTDRVISVVKNFQKVDPSKVTVNAHFQNDLGLDSLDTVEVVMALEEEFGFEIPDNEADKISTINMAVDFIASHP 124 (127)
Q Consensus 45 ~M~~~~I~~~I~~il~~~l~i~~~~I~~dt~l~~dLGlDSL~~veLi~~lEeefgi~I~~~~l~~~~Tv~~Lv~~I~~~~ 124 (127)
.|++.++.++|+++|++.+++++++|+++++|.+++||||++.++|+..||++||++||++++.++.|++++++||.+++
T Consensus 21 ~m~~mei~~~l~~iiae~l~~~~~~I~~d~~l~~dLGlDSL~~veLi~~lE~~fgi~i~~~~l~~~~Tv~dl~~~I~~~~ 100 (101)
T 4dxe_H 21 QSNAMENFDKVKDIIVDRLGVDADKVTEDASFKDDLGADSLDIAELVMELEDEFGTEIPDEEAEKINTVGDAVKFINSLE 100 (101)
T ss_dssp ---CTTHHHHHHHHHHHTTCCCGGGCCTTCBTTTTSCCCHHHHHHHHHHHHHHTTCCCCHHHHTTCCBHHHHHHHHC---
T ss_pred hcCHHHHHHHHHHHHHHHHCcChhhCCCCCcchhhcCCCcHHHHHHHHHHHHHHCCCCCHHHHHcCCCHHHHHHHHHHcc
Confidence 45666899999999999999999999999999779999999999999999999999999999999999999999998775
No 11
>2kjs_A Putative acyl carrier protein; alpha, ACP, PNS, structural genomics, PSI-2, protein structure initiative; HET: PNS; NMR {Geobacter metallireducens gs-15} PDB: 2lml_A* 2kwm_A*
Probab=99.75 E-value=1.2e-18 Score=116.03 Aligned_cols=75 Identities=15% Similarity=0.231 Sum_probs=71.0
Q ss_pred HHHHHHHHHhhhCCCCCccccCCccccccCCChhhHHHHHHHHHHHhCCcCCccccccCCcHHHHHHHHHcCCCC
Q 033119 52 TDRVISVVKNFQKVDPSKVTVNAHFQNDLGLDSLDTVEVVMALEEEFGFEIPDNEADKISTINMAVDFIASHPQA 126 (127)
Q Consensus 52 ~~~I~~il~~~l~i~~~~I~~dt~l~~dLGlDSL~~veLi~~lEeefgi~I~~~~l~~~~Tv~~Lv~~I~~~~~a 126 (127)
+++|.++++++++++..+|++++.|.+++|||||+.++++.+||++||++||.+++.++.||+++++||.+++++
T Consensus 4 le~l~~I~~e~l~~d~~~i~~~~~~~d~lg~DSL~~veli~~ie~~fgi~i~~~~l~~~~TV~dl~~~I~~kl~~ 78 (87)
T 2kjs_A 4 LDALTPIFRQVFDDDSIVLTRETSANDIDAWDSLSHMNLIVSLEVHYKIKFALGELQKLKNVGDLADLVDKKLAR 78 (87)
T ss_dssp HHHHHHHHHHHHTCSSCCCCTTCCSTTCSCCCHHHHHHHHHHHHHHHTCCCCHHHHTTCCSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCccccCCCCCcccCCCCChHHHHHHHHHHHHHhCceecHHHHHcCCCHHHHHHHHHHHHHH
Confidence 578999999999999999999999987799999999999999999999999999999999999999999988754
No 12
>2l9f_A CALE8, meacp; transferase, acyl carrier protein; NMR {Micromonospora echinospora}
Probab=99.74 E-value=2.7e-18 Score=117.69 Aligned_cols=77 Identities=12% Similarity=0.202 Sum_probs=71.8
Q ss_pred HHHHHHHHHHHHhhhCCCCCccccCCccccccCCChhhHHHHHHHHHHHhCCcCCccccccC--CcHHHHHHHHHcCCCC
Q 033119 49 SEVTDRVISVVKNFQKVDPSKVTVNAHFQNDLGLDSLDTVEVVMALEEEFGFEIPDNEADKI--STINMAVDFIASHPQA 126 (127)
Q Consensus 49 ~~I~~~I~~il~~~l~i~~~~I~~dt~l~~dLGlDSL~~veLi~~lEeefgi~I~~~~l~~~--~Tv~~Lv~~I~~~~~a 126 (127)
.+|+++|++++++.+++++++++++++|.+|||+|||++++|++.+|++||+++|++ ..++ .||+++++||.++.++
T Consensus 13 ~~I~~~V~~ilaE~lev~~e~Vtpda~l~dDLglDSLd~VeLVm~lE~~fGi~ipd~-~e~~~~~TV~d~vdyI~~~~~~ 91 (102)
T 2l9f_A 13 TGALELVRHLVAERAELPVEVLRDDSRFLDDLHMSSITVGQLVNEAARAMGLSAVAM-PTNFATATVREMAEALEARERE 91 (102)
T ss_dssp CCHHHHHHHHHHHHTTSCSSSCCTTCBTTTTSCCCHHHHHHHHHHHHHHHTCSTTSS-CSCCTTCBHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHCCCHHHcCCCcchhhhcCCcHHHHHHHHHHHHHHhCCCCCcc-HHHHHHccHHHHHHHHHHhhcc
Confidence 479999999999999999999999999999999999999999999999999999888 7677 9999999999987543
No 13
>1x3o_A Acyl carrier protein; structural genomics, riken structural genomics/proteomics in RSGI, NPPSFA; 1.50A {Thermus thermophilus}
Probab=99.73 E-value=5.6e-18 Score=108.49 Aligned_cols=79 Identities=47% Similarity=0.775 Sum_probs=75.2
Q ss_pred CCHHHHHHHHHHHHHhhhCCCCCccccCCccccccCCChhhHHHHHHHHHHHhCCcCCccccccCCcHHHHHHHHHcCC
Q 033119 46 LDKSEVTDRVISVVKNFQKVDPSKVTVNAHFQNDLGLDSLDTVEVVMALEEEFGFEIPDNEADKISTINMAVDFIASHP 124 (127)
Q Consensus 46 M~~~~I~~~I~~il~~~l~i~~~~I~~dt~l~~dLGlDSL~~veLi~~lEeefgi~I~~~~l~~~~Tv~~Lv~~I~~~~ 124 (127)
|+++++.+++.+++++.+++++++++++++|..++|+||+++++++..||++||+++|.+++.++.|+++++++|.+++
T Consensus 1 M~~~~i~~~l~~~i~~~l~~~~~~i~~~~~l~~~lG~DSl~~~~l~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~~ 79 (80)
T 1x3o_A 1 MTEQEIFEKVKAVIADKLQVEPEKVTLEARFIEDLGADSLDTVELIMGLEDEFGLEISDEEAEKIRTVKDAVEYIKAKL 79 (80)
T ss_dssp CCHHHHHHHHHHHHHHHHTCCGGGCCTTCBTTTTTCCCHHHHHHHHHHHHHHHCCCCCHHHHHHCCBHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHhCCCHHHCCCcCcHHhhcCccHHHHHHHHHHHHHHHCCCcCHHHHHHcCCHHHHHHHHHHHc
Confidence 8999999999999999999998999999999559999999999999999999999999999999999999999998764
No 14
>1klp_A ACP, ACPM, meromycolate extension acyl carrier protein; four-helix bundle, ligand transport; NMR {Mycobacterium tuberculosis} SCOP: a.28.1.1
Probab=99.73 E-value=1e-17 Score=115.74 Aligned_cols=81 Identities=25% Similarity=0.538 Sum_probs=76.8
Q ss_pred CCCHHHHHHHHHHHHHhhhCCCCCccccCCccccccCCChhhHHHHHHHHHHHhCCcCCccccccCCcHHHHHHHHHcCC
Q 033119 45 FLDKSEVTDRVISVVKNFQKVDPSKVTVNAHFQNDLGLDSLDTVEVVMALEEEFGFEIPDNEADKISTINMAVDFIASHP 124 (127)
Q Consensus 45 ~M~~~~I~~~I~~il~~~l~i~~~~I~~dt~l~~dLGlDSL~~veLi~~lEeefgi~I~~~~l~~~~Tv~~Lv~~I~~~~ 124 (127)
+|+++++.++|++++++.+++++++++++++|.+++|+||+++++|+..||++||++||.+++.++.|++++++||.+++
T Consensus 2 ~m~~~~i~~~l~~il~~~l~~~~~~i~~d~~l~~dlG~DSL~~vel~~~lE~~fgi~i~~~~l~~~~Tv~~l~~~i~~~~ 81 (115)
T 1klp_A 2 PVTQEEIIAGIAEIIEEVTGIEPSEITPEKSFVDDLDIDSLSMVEIAVQTEDKYGVKIPDEDLAGLRTVGDVVAYIQKLE 81 (115)
T ss_dssp CCCHHHHHHHHHHHHHHHTCCCTTTCCTTCCTTTTTCSHHHHHHHHHHHHHHHTCCCCCHHHHTTCCSHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHhCcCHHhCCCCCchhhccCCCHHHHHHHHHHHHHHHCCCCCHHHHHcCCCHHHHHHHHHHHH
Confidence 48999999999999999999999999999999669999999999999999999999999999999999999999998765
Q ss_pred C
Q 033119 125 Q 125 (127)
Q Consensus 125 ~ 125 (127)
+
T Consensus 82 ~ 82 (115)
T 1klp_A 82 E 82 (115)
T ss_dssp S
T ss_pred c
Confidence 4
No 15
>3ce7_A Specific mitochodrial acyl carrier protein; malaria, mitochondrial, ACP, fatty acid biosynthesis, lipid synthesis, phosphopantetheine; 1.64A {Toxoplasma}
Probab=99.72 E-value=8.3e-18 Score=115.66 Aligned_cols=79 Identities=33% Similarity=0.518 Sum_probs=75.0
Q ss_pred CCHHHHHHHHHHHHHhhhCCCCCccccCCccc-----cccCCChhhHHHHHHHHHHHhCCcCCccccccCCcHHHHHHHH
Q 033119 46 LDKSEVTDRVISVVKNFQKVDPSKVTVNAHFQ-----NDLGLDSLDTVEVVMALEEEFGFEIPDNEADKISTINMAVDFI 120 (127)
Q Consensus 46 M~~~~I~~~I~~il~~~l~i~~~~I~~dt~l~-----~dLGlDSL~~veLi~~lEeefgi~I~~~~l~~~~Tv~~Lv~~I 120 (127)
|++++|.++|+++|++.++ +.++++++++|. ++||||||++++|+..||++||++|+++++.++.|++++++||
T Consensus 15 ~~~~~i~~~i~~il~e~l~-~~~~i~~d~~l~~~~~~~dLglDSL~~veli~~lE~~fgi~i~~~~~~~~~Tv~~l~~~i 93 (107)
T 3ce7_A 15 TDINAVTNYIVGMCQKFLQ-KGEKVTPSSKLEELRTREDRLWDCLDTVEFVLDVEEIFDVTVPDEVADNFQTLQEIADFV 93 (107)
T ss_dssp TCHHHHHHHHHHHHHTTBC-TTCCCCTTSCGGGSBBTTSSBCCHHHHHHHHHHHHHHHTCCCCHHHHTTCCSHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHhC-CccccCCCCcccccCcccccCCCHHHHHHHHHHHHHHHCCCCCHHHHHhcCCHHHHHHHH
Confidence 7899999999999999999 889999999996 7999999999999999999999999999999999999999999
Q ss_pred HcCCC
Q 033119 121 ASHPQ 125 (127)
Q Consensus 121 ~~~~~ 125 (127)
.++++
T Consensus 94 ~~~~~ 98 (107)
T 3ce7_A 94 VSERA 98 (107)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88753
No 16
>1vku_A Acyl carrier protein; TM0175, structural genomics, JCSG, Pro structure initiative, PSI; 2.00A {Thermotoga maritima} SCOP: a.28.1.1
Probab=99.72 E-value=6.2e-18 Score=115.10 Aligned_cols=81 Identities=23% Similarity=0.497 Sum_probs=76.8
Q ss_pred CCCCHHHHHHHHHHHHHhhhCCCCCccccCCccccccCCChhhHHHHHHHHHHHhCCcCCccccccCCcHHHHHHHHHcC
Q 033119 44 SFLDKSEVTDRVISVVKNFQKVDPSKVTVNAHFQNDLGLDSLDTVEVVMALEEEFGFEIPDNEADKISTINMAVDFIASH 123 (127)
Q Consensus 44 ~~M~~~~I~~~I~~il~~~l~i~~~~I~~dt~l~~dLGlDSL~~veLi~~lEeefgi~I~~~~l~~~~Tv~~Lv~~I~~~ 123 (127)
..|.+.++.++|+++|++.+++++++++++++| .++|+|||++++|+..||++||++||.+++.++.|++++++||.++
T Consensus 11 ~~~~~~~i~~~l~~ila~~l~v~~~~I~~d~~L-~dLGlDSL~~veL~~~LE~~fgi~i~~~~l~~~~TV~~L~~~I~~~ 89 (100)
T 1vku_A 11 HHMERKKLIAKFVEIASEKMGKDLETVDEENTF-KELGFDSIDVIDLVMFFEDEFALRIEDEEISKIRKVKDLIDIVIKK 89 (100)
T ss_dssp CTTHHHHHHHHHHHHHHHTTCCCCCSCCTTSBT-TTTTCCHHHHHHHHHHHHHHHTCCCCHHHHTTCCBHHHHHHHHHHH
T ss_pred hhccHHHHHHHHHHHHHHHHCCCHHHCCCCCCH-HHcCCchHHHHHHHHHHHHHHCCCCCHHHHHcCCCHHHHHHHHHHH
Confidence 468999999999999999999999999999999 6999999999999999999999999999999999999999999876
Q ss_pred CC
Q 033119 124 PQ 125 (127)
Q Consensus 124 ~~ 125 (127)
++
T Consensus 90 ~~ 91 (100)
T 1vku_A 90 LE 91 (100)
T ss_dssp HH
T ss_pred hh
Confidence 53
No 17
>2cgq_A Acyl carrier protein ACPA; RV0033, protein transport, phosphopant; 1.83A {Mycobacterium tuberculosis}
Probab=99.72 E-value=9e-18 Score=116.93 Aligned_cols=94 Identities=20% Similarity=0.284 Sum_probs=70.8
Q ss_pred CCCccccchhhhhhhhcccCCCCCHHHHHHHHHHHHHhhhCCCCCccccCCccccccCCChhhHHHHHHHHHHHhCCcCC
Q 033119 24 SPFSLSFNSIRRCFAEEVRGSFLDKSEVTDRVISVVKNFQKVDPSKVTVNAHFQNDLGLDSLDTVEVVMALEEEFGFEIP 103 (127)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~M~~~~I~~~I~~il~~~l~i~~~~I~~dt~l~~dLGlDSL~~veLi~~lEeefgi~I~ 103 (127)
+|-+---+...-|.+.- .+| ++++.++|+++|++.++ |++++.|.+++|+||+++++|+..||++||++|+
T Consensus 8 ~~~~~~~~~~~~~~~~~---~~M-~~ei~~~v~~il~e~l~-----I~~d~~l~~dLGlDSLd~veLi~~LEe~FgI~I~ 78 (113)
T 2cgq_A 8 HPMSDYDIPTTENLYFQ---GAM-EEAINATIQRILRTDRG-----ITANQVLVDDLGFDSLKLFQLITELEDEFDIAIS 78 (113)
T ss_dssp ---------------------CH-HHHHHHHHHHHHTCCSC-----CCTTCBTTTTTCCCHHHHHHHHHHHHHHHTCCCC
T ss_pred CCchhhhhHHHHHHHhc---ccc-HHHHHHHHHHHHHHHhC-----CCCCCchhhhcCCCHHHHHHHHHHHHHHhCCCcC
Confidence 45555555556666542 368 99999999999999987 8999999779999999999999999999999999
Q ss_pred ccccccCCcHHHHHHHHHcCCCC
Q 033119 104 DNEADKISTINMAVDFIASHPQA 126 (127)
Q Consensus 104 ~~~l~~~~Tv~~Lv~~I~~~~~a 126 (127)
++++.++.||+++++||.+++++
T Consensus 79 ~e~l~~~~TV~dlv~~I~~~l~~ 101 (113)
T 2cgq_A 79 FRDAQNIKTVGDVYTSVAVWFPE 101 (113)
T ss_dssp HHHHHHCCBHHHHHHHHHTTC--
T ss_pred HHHHHhCCCHHHHHHHHHHHHhc
Confidence 99999999999999999998754
No 18
>2qnw_A Acyl carrier protein; malaria, SGC, structural genomics CONS fatty acid biosynthesis, lipid synthesis, phosphopantethein transit peptide; 1.90A {Toxoplasma gondii}
Probab=99.72 E-value=1e-17 Score=108.66 Aligned_cols=79 Identities=42% Similarity=0.646 Sum_probs=74.6
Q ss_pred CCHHHHHHHHHHHHHhhhCCCCCccccCCccccccCCChhhHHHHHHHHHHHhCCcCCccccccCCcHHHHHHHHHcCC
Q 033119 46 LDKSEVTDRVISVVKNFQKVDPSKVTVNAHFQNDLGLDSLDTVEVVMALEEEFGFEIPDNEADKISTINMAVDFIASHP 124 (127)
Q Consensus 46 M~~~~I~~~I~~il~~~l~i~~~~I~~dt~l~~dLGlDSL~~veLi~~lEeefgi~I~~~~l~~~~Tv~~Lv~~I~~~~ 124 (127)
-+++++.+++++++++.+++++++++++++|..++|+||+++++++..||++||+++|.+++.++.|++++++||.+++
T Consensus 3 ~~~~~i~~~l~~ii~~~l~~~~~~i~~d~~l~~dlG~DSl~~vel~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~~ 81 (82)
T 2qnw_A 3 SDDRPLLERVKDVVADQLGVDRARINPESNFIKDLDADSLDSVELVMAFEEKFGVSIPDEEASKIATVQDALSYIEKAK 81 (82)
T ss_dssp CCSHHHHHHHHHHHHHHHCCCGGGCCTTCBHHHHSCCCHHHHHHHHHHHHHHHTCCCCHHHHTTCCBHHHHHHHHHHHT
T ss_pred CcHHHHHHHHHHHHHHHHCCCHhhCCCccchhhccCCcHHHHHHHHHHHHHHHCCcCCHHHHHHcCCHHHHHHHHHHhc
Confidence 3778999999999999999999999999999669999999999999999999999999999999999999999998764
No 19
>2ava_A ACP I, acyl carrier protein I, chloroplast; four-helix-bundle, biosynthetic protein; NMR {Spinacia oleracea} PDB: 2fva_A* 2fve_A 2fvf_A* 2xz0_D* 2xz1_C*
Probab=99.71 E-value=9.9e-18 Score=108.40 Aligned_cols=79 Identities=43% Similarity=0.625 Sum_probs=73.4
Q ss_pred CHHHHHHHHHHHHHhhhCCCCC-ccccCCccccccCCChhhHHHHHHHHHHHhCCcCCccccccCCcHHHHHHHHHcCCC
Q 033119 47 DKSEVTDRVISVVKNFQKVDPS-KVTVNAHFQNDLGLDSLDTVEVVMALEEEFGFEIPDNEADKISTINMAVDFIASHPQ 125 (127)
Q Consensus 47 ~~~~I~~~I~~il~~~l~i~~~-~I~~dt~l~~dLGlDSL~~veLi~~lEeefgi~I~~~~l~~~~Tv~~Lv~~I~~~~~ 125 (127)
+++++.++|.+++++.++++++ +++++++|. ++|+||+++++++..||++||+++|.+++.++.|++++++||.++++
T Consensus 1 ~~~~i~~~l~~i~~~~l~~~~~~~i~~~~~l~-dlG~DSl~~vel~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~~~ 79 (82)
T 2ava_A 1 AKKETIDKVSDIVKEKLALGADVVVTADSEFS-KLGADSLDTVEIVMNLEEEFGINVDEDKAQDISTIQQAADVIEGLLE 79 (82)
T ss_dssp CCHHHHHHHHHHHHHHTTCSSSSCCCSSCCSC-CCTTCCSCHHHHHHHHHHHTTCCCCGGGSSSCCSHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHhCCCcccccCCCCchh-hcCCCHHHHHHHHHHHHHHHCCccCHHHHHhCCCHHHHHHHHHHHHh
Confidence 3578999999999999999887 899999997 99999999999999999999999999999999999999999987754
Q ss_pred C
Q 033119 126 A 126 (127)
Q Consensus 126 a 126 (127)
+
T Consensus 80 ~ 80 (82)
T 2ava_A 80 K 80 (82)
T ss_dssp H
T ss_pred c
Confidence 3
No 20
>1dv5_A APO-DCP, APO-D-alanyl carrier protein; 3-helix bundle, transport protein; NMR {Lactobacillus casei} SCOP: a.28.1.3 PDB: 1hqb_A
Probab=99.70 E-value=3.5e-17 Score=106.37 Aligned_cols=76 Identities=22% Similarity=0.442 Sum_probs=70.0
Q ss_pred HHHHHHHHHHHHHhhhCCCCCccccCCccccccC-CChhhHHHHHHHHHHHhCCcCCccccc--cCCcHHHHHHHHHcCC
Q 033119 48 KSEVTDRVISVVKNFQKVDPSKVTVNAHFQNDLG-LDSLDTVEVVMALEEEFGFEIPDNEAD--KISTINMAVDFIASHP 124 (127)
Q Consensus 48 ~~~I~~~I~~il~~~l~i~~~~I~~dt~l~~dLG-lDSL~~veLi~~lEeefgi~I~~~~l~--~~~Tv~~Lv~~I~~~~ 124 (127)
++++.++|++++++.++.++.+++++++|. ++| +||+++++|++.||++||++||++++. ++.|++++++||.+++
T Consensus 2 ~~~i~~~i~~il~~~~~~~~~~i~~d~~l~-~~g~lDSl~~velv~~lE~~fgi~i~~~~~~~~~~~Tv~~l~~~i~~~~ 80 (80)
T 1dv5_A 2 DEAIKNGVLDILADLTGSDDVKKNLDLNLF-ETGLLDSMGTVQLLLELQSQFGVDAPVSEFDRKEWDTPNKIIAKVEQAQ 80 (80)
T ss_dssp CHHHHHHHHHHHHHHHTSSSTTTCSSCCSS-TTSSCCSHHHHHHHHHHTTTSCCCCCCSSCCTTTTTSHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHhCCCcccCCCCcchh-hccCcChHHHHHHHHHHHHHhCCcCCHHHcCHHhcCCHHHHHHHHHHcC
Confidence 568999999999999998888899999997 556 999999999999999999999999976 8999999999999864
No 21
>1l0i_A Acyl carrier protein; acyl chain binding, fatty acid biosynt lipid transport; HET: PSR; 1.20A {Escherichia coli} SCOP: a.28.1.1 PDB: 3ny7_B* 2fhs_C 1l0h_A* 1acp_A 1t8k_A 2fac_A* 2fad_A* 2fae_A* 2k92_A 2k93_A 2k94_A 2l0q_A
Probab=99.69 E-value=4.5e-17 Score=104.21 Aligned_cols=75 Identities=51% Similarity=0.764 Sum_probs=71.3
Q ss_pred HHHHHHHHHHHhhhCCCCCccccCCccccccCCChhhHHHHHHHHHHHhCCcCCccccccCCcHHHHHHHHHcCC
Q 033119 50 EVTDRVISVVKNFQKVDPSKVTVNAHFQNDLGLDSLDTVEVVMALEEEFGFEIPDNEADKISTINMAVDFIASHP 124 (127)
Q Consensus 50 ~I~~~I~~il~~~l~i~~~~I~~dt~l~~dLGlDSL~~veLi~~lEeefgi~I~~~~l~~~~Tv~~Lv~~I~~~~ 124 (127)
++.+++++++++.+++++++++++++|.+++|+||+++++++..||++||+++|.+++.++.|++++++||.+++
T Consensus 3 ~i~~~l~~~~~~~l~~~~~~i~~~~~l~~dlG~DSl~~~el~~~le~~fgi~i~~~~l~~~~Tv~~l~~~i~~~~ 77 (78)
T 1l0i_A 3 TIEERVKKIIGEQLGVKQEEVTNNASFVEDLGADSLDTVELVMALEEEFDTEIPDEEAEKMTTVQAAIDYINGHQ 77 (78)
T ss_dssp CHHHHHHHHHHHHHTCCGGGCCTTCBTTTTSCCCHHHHHHHHHHHHHHHTCCCCHHHHTTCCBHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHhCCCHHHCCCCcchhhhcCCCHHHHHHHHHHHHHHhCCCCCHHHHHHcCCHHHHHHHHHHhc
Confidence 588999999999999998999999999669999999999999999999999999999999999999999999875
No 22
>1af8_A Actinorhodin polyketide synthase acyl carrier Pro; acyl carrier protein, solution STR antibiotic biosynthesis; NMR {Streptomyces coelicolor} SCOP: a.28.1.1 PDB: 2af8_A 2k0x_A* 2k0y_A 2kg6_A* 2kg8_A* 2kg9_A* 2kga_A* 2kgc_A* 2kgd_A* 2kge_A*
Probab=99.69 E-value=5.8e-18 Score=110.55 Aligned_cols=79 Identities=24% Similarity=0.360 Sum_probs=71.7
Q ss_pred CCHHHHHHHHHHHHHhhhCCCCC----ccccCCccccccCCChhhHHHHHHHHHHHhCCcCCccccccCCcHHHHHHHHH
Q 033119 46 LDKSEVTDRVISVVKNFQKVDPS----KVTVNAHFQNDLGLDSLDTVEVVMALEEEFGFEIPDNEADKISTINMAVDFIA 121 (127)
Q Consensus 46 M~~~~I~~~I~~il~~~l~i~~~----~I~~dt~l~~dLGlDSL~~veLi~~lEeefgi~I~~~~l~~~~Tv~~Lv~~I~ 121 (127)
|+++.+.+.|++++++.++++++ +++++++| .++|+||+++++++..||++||++||.+++.++.|++++++||.
T Consensus 1 M~~~~~~~~l~~il~~~l~~~~~~~~~~i~~~~~l-~dlG~DSL~~vel~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~ 79 (86)
T 1af8_A 1 MATLLTTDDLRRALVECAGETDGTDLSGDFLDLRF-EDIGYDSLALMETAARLESRYGVSIPDDVAGRVDTPRELLDLIN 79 (86)
T ss_dssp CCCSSCHHHHHHHHHTTCCCCSCCCTTTCSSTTST-TTTTCCTTTHHHHHHHHTTTTCSCCCTTTTTTCCSHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHhCCCcccccccCCCCCCh-hhcCCCHHHHHHHHHHHHHHHCCCcCHHHHHcCCCHHHHHHHHH
Confidence 55566788899999999999876 78999999 59999999999999999999999999999999999999999998
Q ss_pred cCCC
Q 033119 122 SHPQ 125 (127)
Q Consensus 122 ~~~~ 125 (127)
++++
T Consensus 80 ~~~~ 83 (86)
T 1af8_A 80 GALA 83 (86)
T ss_dssp HHHH
T ss_pred HHhh
Confidence 8653
No 23
>2lki_A Putative uncharacterized protein; helical bundle, acyl carrier, phosphopantetheine, fatty acid biosynthesis, lipid synthesis, PSI-biology; HET: PNS; NMR {Nitrosomonas europaea}
Probab=99.68 E-value=8.5e-17 Score=110.40 Aligned_cols=87 Identities=21% Similarity=0.324 Sum_probs=70.6
Q ss_pred hhhhhhhcccCCCCCHHHHHHHHHHHHHhhhCCC--CCccccCCccccccCC-ChhhHHHHHHHHHHHhCCcCCccc--c
Q 033119 33 IRRCFAEEVRGSFLDKSEVTDRVISVVKNFQKVD--PSKVTVNAHFQNDLGL-DSLDTVEVVMALEEEFGFEIPDNE--A 107 (127)
Q Consensus 33 ~~~~~~~~~~~~~M~~~~I~~~I~~il~~~l~i~--~~~I~~dt~l~~dLGl-DSL~~veLi~~lEeefgi~I~~~~--l 107 (127)
.+.|++.. ..| ++.++|+++|++.++++ +++++++++|.+++|+ ||+++++|++.||++||++||+++ .
T Consensus 13 ~~~~~~~~---~~m---~i~~~i~~il~e~l~~~~~~~~i~~d~~L~~dLGl~DSL~~veLi~~lE~~FgI~I~~eel~~ 86 (105)
T 2lki_A 13 GRENLYFQ---GHM---QHLEAVRNILGDVLNLGERKHTLTASSVLLGNIPELDSMAVVNVITALEEYFDFSVDDDEISA 86 (105)
T ss_dssp -------------C---CTHHHHHHHHHHHTTCTTGGGTCCTTSBCBTTBTTCCHHHHHHHHHHHHHHHTSCCCGGGCCG
T ss_pred hhhhhhhh---hhh---HHHHHHHHHHHHHhCCCcccccCCCCCchhhhcCcccHHHHHHHHHHHHHHhCCCcCHHHhhH
Confidence 44555443 334 58889999999999988 7899999999878999 999999999999999999999999 4
Q ss_pred ccCCcHHHHHHHHHcCCC
Q 033119 108 DKISTINMAVDFIASHPQ 125 (127)
Q Consensus 108 ~~~~Tv~~Lv~~I~~~~~ 125 (127)
.++.||+++++||.++++
T Consensus 87 ~~~~Tv~~l~~~I~~~~~ 104 (105)
T 2lki_A 87 QTFETLGSLALFVEHKLS 104 (105)
T ss_dssp GGGSBHHHHHHHHHHHTT
T ss_pred HhcCCHHHHHHHHHHHhc
Confidence 589999999999998764
No 24
>2lte_A Specialized acyl carrier protein; APO protein, transferase; NMR {Pseudomonas aeruginosa}
Probab=99.50 E-value=3e-18 Score=117.15 Aligned_cols=80 Identities=24% Similarity=0.431 Sum_probs=75.5
Q ss_pred CCCHHHHHHHHHHHHHhhhCCCCCccccCCccccccCCChhhHHHHHHHHHHHhCCcCCccccccCCcHHHHHHHHHcCC
Q 033119 45 FLDKSEVTDRVISVVKNFQKVDPSKVTVNAHFQNDLGLDSLDTVEVVMALEEEFGFEIPDNEADKISTINMAVDFIASHP 124 (127)
Q Consensus 45 ~M~~~~I~~~I~~il~~~l~i~~~~I~~dt~l~~dLGlDSL~~veLi~~lEeefgi~I~~~~l~~~~Tv~~Lv~~I~~~~ 124 (127)
.|+++ +.++|++++++.+++++++|+++++| .++|+|||++++|+..||++||++||.+++.++.||+++++||.+++
T Consensus 22 ~M~~e-i~~~l~~ila~~l~i~~~~I~~d~~l-~dLGlDSL~~veL~~~lE~~fgi~i~~~~l~~~~TV~~l~~~I~~~~ 99 (103)
T 2lte_A 22 HMPND-MEDHLLTVLSVASGVPKEEISRDSRM-EDLAFDSLVVSELSLKLRKEFGVTGVDDELDLLETVDELFQLVEKHR 99 (103)
Confidence 57776 99999999999999999999999999 69999999999999999999999999999999999999999999887
Q ss_pred CC
Q 033119 125 QA 126 (127)
Q Consensus 125 ~a 126 (127)
++
T Consensus 100 ~~ 101 (103)
T 2lte_A 100 AA 101 (103)
Confidence 54
No 25
>2jq4_A AGR_C_4658P, hypothetical protein ATU2571; ATC2521, unknown function, ATC, S genomics, PSI-2, protein structure initiative; NMR {Agrobacterium tumefaciens} SCOP: a.28.1.1
Probab=99.66 E-value=4.9e-17 Score=111.29 Aligned_cols=85 Identities=19% Similarity=0.344 Sum_probs=66.4
Q ss_pred hcccCCCCCHHHHHHHHHHHHHhhhC--CCCCccccCCccccccCCChhhHHHHHHHHHHHhCCcCCccccc--cCCcHH
Q 033119 39 EEVRGSFLDKSEVTDRVISVVKNFQK--VDPSKVTVNAHFQNDLGLDSLDTVEVVMALEEEFGFEIPDNEAD--KISTIN 114 (127)
Q Consensus 39 ~~~~~~~M~~~~I~~~I~~il~~~l~--i~~~~I~~dt~l~~dLGlDSL~~veLi~~lEeefgi~I~~~~l~--~~~Tv~ 114 (127)
.+++++.++++++.++|+++|.++++ ++.++|+++++|. ++|+|||++++|+..||++||++||++++. ++.|++
T Consensus 11 ~~~~~~~~~~~~i~~~i~~il~~~l~~~v~~~~i~~d~~l~-dlGlDSL~~veLv~~lE~~fgI~i~~~~l~~~~~~tv~ 89 (105)
T 2jq4_A 11 SSGRENLYFQGHMNATIREILAKFGQLPTPVDTIADEADLY-AAGLSSFASVQLMLGIEEAFDIEFPDNLLNRKSFASIK 89 (105)
T ss_dssp ------------CHHHHHHHHHHTSCCSSCGGGCCTTSCGG-GGTCCHHHHHHHHHHHHHHHSCCCCHHHHSSGGGGCHH
T ss_pred ccCCCCCCCHHHHHHHHHHHHHHHhccCCCcccCCCCCCHh-hcCCCHHHHHHHHHHHHHHHCCCcCHHHhhhhhcCCHH
Confidence 34567888999999999999999865 4578999999998 999999999999999999999999999976 789999
Q ss_pred HHHHHHHcCC
Q 033119 115 MAVDFIASHP 124 (127)
Q Consensus 115 ~Lv~~I~~~~ 124 (127)
+++++|....
T Consensus 90 ~l~~~v~~~~ 99 (105)
T 2jq4_A 90 AIEDTVKLIL 99 (105)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9999887654
No 26
>2kw2_A Specialized acyl carrier protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Rhodopseudomonas palustris} PDB: 2ll8_A* 2lpk_A 3lmo_A
Probab=99.66 E-value=5.2e-17 Score=110.08 Aligned_cols=76 Identities=25% Similarity=0.452 Sum_probs=70.1
Q ss_pred HHHHHHHHHHHhhhCCCCCccccCCccccccCCChhhHHHHHHHHHHHhCCcCCccc------cccCCc-----HHHHHH
Q 033119 50 EVTDRVISVVKNFQKVDPSKVTVNAHFQNDLGLDSLDTVEVVMALEEEFGFEIPDNE------ADKIST-----INMAVD 118 (127)
Q Consensus 50 ~I~~~I~~il~~~l~i~~~~I~~dt~l~~dLGlDSL~~veLi~~lEeefgi~I~~~~------l~~~~T-----v~~Lv~ 118 (127)
++.++|++++++.+++++++|+++++|.+++|+||+++++|+..||++||++||+++ +.++.| |+++++
T Consensus 3 ~i~~~v~~ii~~~l~~~~~~i~~d~~l~~dLGlDSL~~veLi~~lE~~fgi~i~~~~l~~~~~~~~~~T~~~~Tv~~l~~ 82 (101)
T 2kw2_A 3 STFDRVATIIAETCDIPRETITPESHAIDDLGIDSLDFLDIAFAIDKAFGIKLPLEKWTQEVNDGKATTEQYFVLKNLAA 82 (101)
T ss_dssp CHHHHHHHHHHHHHCCCGGGCCTTCBCCCCCCCCHHHHHHHHHHHHHHTTCCCCHHHHHHHHHTTSSCHHHHHBHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCHhhCCCCcchHHhcCCCHHHHHHHHHHHHHHHCCccCHHHhcchhhhhhccCCCcCcHHHHHH
Confidence 688999999999999999999999999779999999999999999999999999987 568889 999999
Q ss_pred HHHcCCC
Q 033119 119 FIASHPQ 125 (127)
Q Consensus 119 ~I~~~~~ 125 (127)
||.++++
T Consensus 83 ~i~~~~~ 89 (101)
T 2kw2_A 83 RIDELVA 89 (101)
T ss_dssp HHHHHHH
T ss_pred HHHHHhc
Confidence 9987653
No 27
>2amw_A Hypothetical protein NE2163; all helical protein, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=99.65 E-value=2.1e-16 Score=102.82 Aligned_cols=75 Identities=21% Similarity=0.354 Sum_probs=68.6
Q ss_pred HHHHHHHHHHhhhCCC--CCccccCCccccccCC-ChhhHHHHHHHHHHHhCCcCCccccc--cCCcHHHHHHHHHcCCC
Q 033119 51 VTDRVISVVKNFQKVD--PSKVTVNAHFQNDLGL-DSLDTVEVVMALEEEFGFEIPDNEAD--KISTINMAVDFIASHPQ 125 (127)
Q Consensus 51 I~~~I~~il~~~l~i~--~~~I~~dt~l~~dLGl-DSL~~veLi~~lEeefgi~I~~~~l~--~~~Tv~~Lv~~I~~~~~ 125 (127)
+.++|++++++.++++ +++++++++|.+++|+ ||+++++++..||++||++|+++++. ++.|++++++||.++++
T Consensus 3 i~~~l~~il~~~l~~~~~~~~i~~d~~l~~dlg~~DSl~~~elv~~lE~~fgi~i~~~~l~~~~~~Tv~~l~~~i~~~~~ 82 (83)
T 2amw_A 3 HLEAVRNILGDVLNLGERKHTLTASSVLLGNIPELDSMAVVNVITALEEYFDFSVDDDEISAQTFETLGSLALFVEHKLS 82 (83)
T ss_dssp THHHHHHHHHHHTTCGGGGGSCCTTSCSTTTSTTTTHHHHHHHHHHHHHHTTCCCCTTTCCGGGSSSHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhCCCCccccCCCcchhhhccCccCHHHHHHHHHHHHHHhCCeeCHHhhhHHhcCCHHHHHHHHHHHhc
Confidence 6788999999999988 7899999999878999 99999999999999999999999965 49999999999988753
No 28
>1or5_A Acyl carrier protein; ACP, biosynthesis, frenolicin, holo, polyketide synthase, PKS, biosynthetic protein; NMR {Streptomyces roseofulvus} SCOP: a.28.1.1
Probab=99.64 E-value=7.4e-17 Score=104.60 Aligned_cols=77 Identities=22% Similarity=0.414 Sum_probs=70.7
Q ss_pred HHHHHHHHHHHHhhhCCCCC-ccc--cCCccccccCCChhhHHHHHHHHHHHhCCcCCccccccCCcHHHHHHHHHcCCC
Q 033119 49 SEVTDRVISVVKNFQKVDPS-KVT--VNAHFQNDLGLDSLDTVEVVMALEEEFGFEIPDNEADKISTINMAVDFIASHPQ 125 (127)
Q Consensus 49 ~~I~~~I~~il~~~l~i~~~-~I~--~dt~l~~dLGlDSL~~veLi~~lEeefgi~I~~~~l~~~~Tv~~Lv~~I~~~~~ 125 (127)
+.+.+.|++++++.++++++ +++ ++++|. ++|+||+++++++..||++||++||.+++.++.|++++++||.++++
T Consensus 3 ~~~~~~l~~~l~~~l~~~~~~~i~~~~~~~~~-dlG~DSL~~vel~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~~~ 81 (83)
T 1or5_A 3 ALTVDDLKKLLAETAGEDDSVDLAGELDTPFV-DLGYDSLALLETAAVLQQRYGIALTDETVGRLGTPRELLDEVNTTPA 81 (83)
T ss_dssp CSCHHHHHHHHHHHSCCCSSCCGGGCSSSCHH-HHSCCHHHHHHHHHHHHTTSCCCCSHHHHHHCCCSHHHHHHHTTCCS
T ss_pred hHHHHHHHHHHHHHhCCCcccccCCCCCCcHH-HhCCCHHHHHHHHHHHHHHHCCccCHHHHhccCCHHHHHHHHHHHhc
Confidence 34678899999999999877 899 999985 99999999999999999999999999999999999999999998876
Q ss_pred C
Q 033119 126 A 126 (127)
Q Consensus 126 a 126 (127)
+
T Consensus 82 ~ 82 (83)
T 1or5_A 82 T 82 (83)
T ss_dssp C
T ss_pred C
Confidence 5
No 29
>2ehs_A ACP, acyl carrier protein; lipid transport, structural genomics, NPPSFA, national proje protein structural and functional analyses; 1.30A {Aquifex aeolicus} PDB: 2eht_A
Probab=99.61 E-value=1.2e-15 Score=96.67 Aligned_cols=75 Identities=41% Similarity=0.714 Sum_probs=69.5
Q ss_pred HHHHHHHHHHhhhCCCCCccccCCccccccCCChhhHHHHHHHHHHHhCCcCCccccccCCcHHHHHHHHHcCCC
Q 033119 51 VTDRVISVVKNFQKVDPSKVTVNAHFQNDLGLDSLDTVEVVMALEEEFGFEIPDNEADKISTINMAVDFIASHPQ 125 (127)
Q Consensus 51 I~~~I~~il~~~l~i~~~~I~~dt~l~~dLGlDSL~~veLi~~lEeefgi~I~~~~l~~~~Tv~~Lv~~I~~~~~ 125 (127)
+.+.+.+++++.+++++++++++++|..++|+||+++++++..+|++||++++..++.++.|++++++++.++++
T Consensus 2 i~~~l~~~~~~~l~~~~~~i~~~~~l~~~lG~DSl~~~~l~~~le~~~gi~i~~~~~~~~~tv~~l~~~i~~~~~ 76 (77)
T 2ehs_A 2 LEERVKEIIAEQLGVEKEKITPEAKFVEDLGADSLDVVELIMAFEEEFGIEIPDEDAEKIQTVGDVINYLKEKVG 76 (77)
T ss_dssp HHHHHHHHHHHHHCCCGGGCCTTCBTTTTTCCCHHHHHHHHHHHHHHHTCCCCHHHHHTCCBHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHhCCChhhCCCccchhhccCCCHHHHHHHHHHHHHHhCCccCHHHHHHcCCHHHHHHHHHHHhc
Confidence 678899999999999988999999995599999999999999999999999999999999999999999987653
No 30
>2l3v_A ACP, acyl carrier protein; structural genomi seattle structural genomics center for infectious disease, lipid binding protein; NMR {Brucella melitensis}
Probab=99.59 E-value=1.4e-16 Score=101.97 Aligned_cols=75 Identities=52% Similarity=0.744 Sum_probs=71.4
Q ss_pred HHHHHHHHHHHhhhCCCCCccccCCccccccCCChhhHHHHHHHHHHHhCCcCCccccccCCcHHHHHHHHHcCC
Q 033119 50 EVTDRVISVVKNFQKVDPSKVTVNAHFQNDLGLDSLDTVEVVMALEEEFGFEIPDNEADKISTINMAVDFIASHP 124 (127)
Q Consensus 50 ~I~~~I~~il~~~l~i~~~~I~~dt~l~~dLGlDSL~~veLi~~lEeefgi~I~~~~l~~~~Tv~~Lv~~I~~~~ 124 (127)
++.+++++++++.+++++++++++++|..++|+||+++++++..||++||+++|.+++.++.|+++++++|.+++
T Consensus 4 ~i~~~l~~~~~~~l~~~~~~i~~~~~l~~~lG~DSl~~~~l~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~~ 78 (79)
T 2l3v_A 4 DTAERVKKIVVEHLGVDADKVTEGASFIDDLGADSLDTVELVMAFEEEFGVEIPDDAAETILTVGDAVKFIDKAS 78 (79)
T ss_dssp HHHHHHHHHHHHHTCCCSTTCCTTCCHHHHTCCCSSSSSSTTTTHHHHTTCCCCHHHHTTCSSSSTTHHHHHHTC
T ss_pred HHHHHHHHHHHHHhCCCHhhCCCCCccccccCCCHHHHHHHHHHHHHHHCCCCCHHHHHHcCCHHHHHHHHHHhc
Confidence 789999999999999999999999999459999999999999999999999999999999999999999999876
No 31
>1nq4_A Oxytetracycline polyketide synthase acyl carrier protein; solution structure, dynamics, ACP, biosynthetic protein; NMR {Streptomyces rimosus} SCOP: a.28.1.1
Probab=99.58 E-value=1.8e-15 Score=101.47 Aligned_cols=79 Identities=19% Similarity=0.325 Sum_probs=63.9
Q ss_pred CCCHHHHHHHHHHHHHhhhCCCCCccccCCccccccCCChhhHHHHHHHHHHHhCCcCCccccccCCcHHHHHHHHHcCC
Q 033119 45 FLDKSEVTDRVISVVKNFQKVDPSKVTVNAHFQNDLGLDSLDTVEVVMALEEEFGFEIPDNEADKISTINMAVDFIASHP 124 (127)
Q Consensus 45 ~M~~~~I~~~I~~il~~~l~i~~~~I~~dt~l~~dLGlDSL~~veLi~~lEeefgi~I~~~~l~~~~Tv~~Lv~~I~~~~ 124 (127)
.|+.+++.+.+.+.+....+.++++++++++|. ++|+|||+.++|+..||++||++||.+++.++.|++++++||.+++
T Consensus 3 ~~t~~~l~~ii~~~l~~~~~~~~~~i~~d~~~~-dlG~DSL~~vel~~~le~~fgi~i~~~~l~~~~Tv~~l~~~i~~~~ 81 (95)
T 1nq4_A 3 LLTLSDLLTLLRECAGEEESIDLGGDVEDVAFD-ALGYDSLALLNTVGRIERDYGVQLGDDAVEKATTPRALIEMTNASL 81 (95)
T ss_dssp CCCHHHHHHHHHHHHTCSSTTCSCSCCSSSCHH-HHTCCSHHHHHHHHHHHHHTCCCSCTTHHHHCCSHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHccccccccccCCCCCChh-hhCCCHHHHHHHHHHHHHHHCCccCHHHHHcCCCHHHHHHHHHHHH
Confidence 355666555555554433333445899999995 9999999999999999999999999999999999999999998764
No 32
>1fh1_A NODF, nodulation protein F; ROOT nodulation factor, protein backbone fold, lipid binding protein; NMR {Rhizobium leguminosarum} SCOP: i.11.1.1
Probab=99.56 E-value=2.1e-16 Score=105.08 Aligned_cols=77 Identities=23% Similarity=0.420 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHhhhC--------CCCCccccCCccccccCCChhhHHHHHHHHHHHhCCcCC---ccccccCCcHHHHHH
Q 033119 50 EVTDRVISVVKNFQK--------VDPSKVTVNAHFQNDLGLDSLDTVEVVMALEEEFGFEIP---DNEADKISTINMAVD 118 (127)
Q Consensus 50 ~I~~~I~~il~~~l~--------i~~~~I~~dt~l~~dLGlDSL~~veLi~~lEeefgi~I~---~~~l~~~~Tv~~Lv~ 118 (127)
++.++|+++|++.++ +++++++++++| .++|+||+++++|+..||++||++|+ ..++.++.|++++++
T Consensus 4 ~i~~~i~~ii~~~~~~~~~~~~~~~~~~i~~d~~l-~dlg~DSl~~vel~~~lE~~fgi~i~~~~~~~~~~~~Tv~~l~~ 82 (92)
T 1fh1_A 4 QLTLEIISAINKLVKAENGERTSVALGEITTDTEL-TSLGIDSLGLADVLWDLEQLYGIKIEMNTADAWSNLNNIGDVVE 82 (92)
T ss_dssp -CHHHHHHHHHHHC-----------------------------CTTTTHHHHHHHC-----------------CTTTSTH
T ss_pred HHHHHHHHHHHHHHHhccccccCCCHhhCCCCCCH-hhcCCChHHHHHHHHHHHHHhCCccCCccHhHHhhcCCHHHHHH
Confidence 567778888888776 445589999999 69999999999999999999999999 667889999999999
Q ss_pred HHHcCCCCC
Q 033119 119 FIASHPQAK 127 (127)
Q Consensus 119 ~I~~~~~ak 127 (127)
||.+++++|
T Consensus 83 ~i~~~~~~~ 91 (92)
T 1fh1_A 83 AVRGLLTKE 91 (92)
T ss_dssp HHHC-----
T ss_pred HHHHHhhcc
Confidence 999988754
No 33
>2afd_A Protein ASL1650; twisted antiparallel helical bundle, acyl carrier protein FA structural genomics, PSI, protein structure initiative; NMR {Nostoc SP} PDB: 2afe_A
Probab=99.55 E-value=2.3e-14 Score=92.63 Aligned_cols=80 Identities=16% Similarity=0.183 Sum_probs=75.6
Q ss_pred CCCCHHHHHHHHHHHHHhhhCCCCCccccCCccccccCCChhhHHHHHHHHHHHhCCcCCccccccCCcHHHHHHHHHcC
Q 033119 44 SFLDKSEVTDRVISVVKNFQKVDPSKVTVNAHFQNDLGLDSLDTVEVVMALEEEFGFEIPDNEADKISTINMAVDFIASH 123 (127)
Q Consensus 44 ~~M~~~~I~~~I~~il~~~l~i~~~~I~~dt~l~~dLGlDSL~~veLi~~lEeefgi~I~~~~l~~~~Tv~~Lv~~I~~~ 123 (127)
+.++.+++.+.+.++++++++++.++++++.+|. ++|+||+..+++...|++.||+.++..++..+.|++++++++.++
T Consensus 8 ~~~~~~~~~~~l~~~~~~~l~~~~~~i~~~~~~~-~lG~DSl~~~~l~~~l~~~~~~~i~~~~~~~~~ti~~la~~l~~~ 86 (88)
T 2afd_A 8 QPASVEDIQSWLIDQFAQQLDVDPDDIDMEESFD-NYDLNSSKALILLGRLEKWLGKELNPVLIFNYPTIAQLAKRLGEL 86 (88)
T ss_dssp CCSSHHHHHHHHHHHHHHHHTSCGGGCCTTSCGG-GTTCCSTHHHHHHHHHHHHTTSCCCGGGTTTCCSHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHCcCHHHcCCCCCHH-HcCccHHHHHHHHHHHHHHHCCCcCHHHHHhCCCHHHHHHHHHHH
Confidence 5678999999999999999999888999999997 999999999999999999999999999999999999999999876
Q ss_pred C
Q 033119 124 P 124 (127)
Q Consensus 124 ~ 124 (127)
+
T Consensus 87 ~ 87 (88)
T 2afd_A 87 Y 87 (88)
T ss_dssp T
T ss_pred h
Confidence 4
No 34
>2kr5_A PKS, aflatoxin biosynthesis polyketide synthase; acyl carrrier protein, holo, phosphopantetheine, transport protein; HET: PNS; NMR {Aspergillus parasiticus}
Probab=99.50 E-value=6.3e-14 Score=91.31 Aligned_cols=79 Identities=22% Similarity=0.336 Sum_probs=73.0
Q ss_pred CCHHHHHHHHHHHHHhhhCCCCCccccCCccccccCCChhhHHHHHHHHHHHhCCcCCc--cccccCCcHHHHHHHHHcC
Q 033119 46 LDKSEVTDRVISVVKNFQKVDPSKVTVNAHFQNDLGLDSLDTVEVVMALEEEFGFEIPD--NEADKISTINMAVDFIASH 123 (127)
Q Consensus 46 M~~~~I~~~I~~il~~~l~i~~~~I~~dt~l~~dLGlDSL~~veLi~~lEeefgi~I~~--~~l~~~~Tv~~Lv~~I~~~ 123 (127)
-..+++.+.+.+++++.+++++++++++++|. ++|+|||..+++...++++||++++. .++..+.|+++++++|.+.
T Consensus 7 ~~~~~~~~~l~~~~~~~l~~~~~~i~~~~~~~-~lG~DSL~~~~l~~~l~~~~g~~l~~~~~~l~~~~Tv~~la~~l~~~ 85 (89)
T 2kr5_A 7 GVSNEKLDAVMRVVSEESGIALEELTDDSNFA-DMGIDSLSSMVIGSRFREDLGLDLGPEFSLFIDCTTVRALKDFMLGS 85 (89)
T ss_dssp CCCHHHHHHHHHHHHHHHCCCGGGCCTTCBHH-HHTCCHHHHHHHHHHHHHTTCCCCCSSCCTTTSCCBHHHHHHHHHTT
T ss_pred CccHHHHHHHHHHHHHHHCcCHHHCCCCCCHH-HcCccHHHHHHHHHHHHHHHCCCCCchHHHHHcCCCHHHHHHHHHHh
Confidence 35678999999999999999988999999996 99999999999999999999999999 8899999999999999875
Q ss_pred CC
Q 033119 124 PQ 125 (127)
Q Consensus 124 ~~ 125 (127)
-.
T Consensus 86 ~~ 87 (89)
T 2kr5_A 86 GD 87 (89)
T ss_dssp TC
T ss_pred Cc
Confidence 43
No 35
>2liu_A CURA; holo state, transferase; NMR {Lyngbya majuscula} PDB: 2liw_A*
Probab=99.46 E-value=1.2e-13 Score=91.13 Aligned_cols=80 Identities=19% Similarity=0.279 Sum_probs=74.8
Q ss_pred CCCCHHHHHHHHHHHHHhhhCCCCCccccCCccccccCCChhhHHHHHHHHHHHhCCcCCccccccCCcHHHHHHHHHcC
Q 033119 44 SFLDKSEVTDRVISVVKNFQKVDPSKVTVNAHFQNDLGLDSLDTVEVVMALEEEFGFEIPDNEADKISTINMAVDFIASH 123 (127)
Q Consensus 44 ~~M~~~~I~~~I~~il~~~l~i~~~~I~~dt~l~~dLGlDSL~~veLi~~lEeefgi~I~~~~l~~~~Tv~~Lv~~I~~~ 123 (127)
..++.+++.+.+.++++++++++.++++++++|. ++|+||+..+++...|+++||++++..++..+.|+++++++|.++
T Consensus 15 ~~~~~~~~~~~l~~~~~~~l~~~~~~i~~~~~~~-~lG~DSl~~~~l~~~l~~~~g~~l~~~~l~~~~ti~~la~~l~~~ 93 (99)
T 2liu_A 15 NQVNLSEIKQVLKQQLAEALYTEESEIAEDQKFV-DLGLDSIVGVEWTTTINQTYNLNLKATKLYDYPTLLELSGYIAQI 93 (99)
T ss_dssp CCCCHHHHHHHHHHHHHHHTTSCGGGCCSSSCHH-HHTCCHHHHHHHHHHHHHHHTCCCCHHHHHHCCSHHHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHHHHHHCcCHHHcCCCCCHH-HhCccHHHHHHHHHHHHHHHCCCcCHHHHHhCCCHHHHHHHHHHH
Confidence 3468899999999999999999989999999997 999999999999999999999999999999999999999999875
Q ss_pred C
Q 033119 124 P 124 (127)
Q Consensus 124 ~ 124 (127)
+
T Consensus 94 ~ 94 (99)
T 2liu_A 94 L 94 (99)
T ss_dssp H
T ss_pred h
Confidence 4
No 36
>2l22_A Mupirocin didomain acyl carrier protein; biosynthetic protein; NMR {Pseudomonas fluorescens}
Probab=99.44 E-value=1.4e-13 Score=103.07 Aligned_cols=83 Identities=13% Similarity=0.312 Sum_probs=75.7
Q ss_pred cCCCCCHHHHHHHHHHHHHhhhCCCCCccccCCccccccCCChhhHHHHHHHHHHHhCCcCCccccccCCcHHHHHHHHH
Q 033119 42 RGSFLDKSEVTDRVISVVKNFQKVDPSKVTVNAHFQNDLGLDSLDTVEVVMALEEEFGFEIPDNEADKISTINMAVDFIA 121 (127)
Q Consensus 42 ~~~~M~~~~I~~~I~~il~~~l~i~~~~I~~dt~l~~dLGlDSL~~veLi~~lEeefgi~I~~~~l~~~~Tv~~Lv~~I~ 121 (127)
..+.|+++++.+.|++++++++++++++|+++.+|. ++|+|||+.+++...|+++||++++..++..+.|++++++||.
T Consensus 18 ~~~~~~~~~i~~~l~~~~a~~l~~~~~~i~~~~~f~-~lG~DSl~~~el~~~l~~~~g~~l~~~~~~~~~Ti~~la~~l~ 96 (212)
T 2l22_A 18 GSHMVADDECAQFLRQSLAAMLYCEPGQIRDGSRFL-ELGLDSVIAAQWIREINKHYQLKIPADGIYTYPVFKAFTQWVG 96 (212)
T ss_dssp ----CCTTHHHHHHHHHHHHHTTCCTTSCCTTCBHH-HHTCCHHHHHHHHHHHHHHTTCCCCTTHHHHCCBHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHCcCHHHcCCCCCHH-HhCCcHHHHHHHHHHHHHHHCCCCCHHHHHcCCCHHHHHHHHH
Confidence 456789999999999999999999999999999997 9999999999999999999999999999999999999999998
Q ss_pred cCCC
Q 033119 122 SHPQ 125 (127)
Q Consensus 122 ~~~~ 125 (127)
++..
T Consensus 97 ~~~~ 100 (212)
T 2l22_A 97 TQLQ 100 (212)
T ss_dssp TTSC
T ss_pred Hhcc
Confidence 7754
No 37
>2l22_A Mupirocin didomain acyl carrier protein; biosynthetic protein; NMR {Pseudomonas fluorescens}
Probab=99.43 E-value=6e-13 Score=99.63 Aligned_cols=80 Identities=18% Similarity=0.319 Sum_probs=74.5
Q ss_pred CCCHHHHHHHHHHHHHhhhCCCCCccccCCccccccCCChhhHHHHHHHHHHHhCCcCCccccccCCcHHHHHHHHHcCC
Q 033119 45 FLDKSEVTDRVISVVKNFQKVDPSKVTVNAHFQNDLGLDSLDTVEVVMALEEEFGFEIPDNEADKISTINMAVDFIASHP 124 (127)
Q Consensus 45 ~M~~~~I~~~I~~il~~~l~i~~~~I~~dt~l~~dLGlDSL~~veLi~~lEeefgi~I~~~~l~~~~Tv~~Lv~~I~~~~ 124 (127)
+.+++.+.+.|.+++++.++++.++++++++|. ++|+||++.++|+..|+++||++++..++..+.|+++|++||.+++
T Consensus 125 ~~~~~~i~~~l~~~~~~~l~~~~~~i~~~~~f~-~lG~DSl~a~el~~~l~~~~g~~l~~~~l~~~~Ti~~La~~l~~~~ 203 (212)
T 2l22_A 125 SAQRESIQDYLKQSLGELLFLDPGQLRSGAQFL-DLGMDSVTGTQWMRGVSRHFSIQLAADAIYTWPTLKSLADEVDRRV 203 (212)
T ss_dssp SHHHHHHHHHHHHHHHHHHSSCSSSCCSSCCGG-GGCSSSHHHHHHHHHHHHHTTCCCCGGGGGGCCSHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHHHHCCChhhCCCCCCHH-HhCCCHHHHHHHHHHHHHHHCCCcCHHHHHcCCCHHHHHHHHHHHh
Confidence 356789999999999999999989999999997 9999999999999999999999999999999999999999998764
Q ss_pred C
Q 033119 125 Q 125 (127)
Q Consensus 125 ~ 125 (127)
+
T Consensus 204 ~ 204 (212)
T 2l22_A 204 Q 204 (212)
T ss_dssp C
T ss_pred c
Confidence 3
No 38
>2ju1_A Erythronolide synthase; carrier protein domain, modular polyketide synthase, alpha- helical bundle, acyltransferase; NMR {Saccharopolyspora erythraea} PDB: 2ju2_A
Probab=99.40 E-value=2.1e-13 Score=89.83 Aligned_cols=77 Identities=21% Similarity=0.321 Sum_probs=70.8
Q ss_pred CHHHHHHHHHHHHHhhhC-CCCCccccCCccccccCCChhhHHHHHHHHHHHhCCcCCccccccCCcHHHHHHHHHcCC
Q 033119 47 DKSEVTDRVISVVKNFQK-VDPSKVTVNAHFQNDLGLDSLDTVEVVMALEEEFGFEIPDNEADKISTINMAVDFIASHP 124 (127)
Q Consensus 47 ~~~~I~~~I~~il~~~l~-i~~~~I~~dt~l~~dLGlDSL~~veLi~~lEeefgi~I~~~~l~~~~Tv~~Lv~~I~~~~ 124 (127)
.++.+.+.+.++++++++ .+.++++++++|. ++|+||++.+++...++++||++++..++.++.|++++++++.+++
T Consensus 17 ~~~~~~~~l~~~~~~~l~~~~~~~i~~~~~f~-~lG~DSL~a~~l~~~l~~~~g~~l~~~~l~~~~ti~~la~~l~~~l 94 (95)
T 2ju1_A 17 RTAELVRLVRTSTATVLGHDDPKAVRATTPFK-ELGFDSLAAVRLRNLLNAATGLRLPSTLVFDHPNASAVAGFLDAEL 94 (95)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCGGGCCSSSCHH-HHTCSSHHHHHHHHHHGGGTSSCCCTTHHHHCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCChhhCCCCCCHH-HcCCcHHHHHHHHHHHHHHHCCCCChhHHhcCCCHHHHHHHHHHHc
Confidence 446788999999999999 7788999999996 9999999999999999999999999999999999999999998754
No 39
>1dny_A Non-ribosomal peptide synthetase peptidyl carrier protein; four-helix bundle, modular enzyme, domain, flexible region; NMR {Brevibacillus brevis} SCOP: a.28.1.2 PDB: 2gdw_A 2gdx_A 2gdy_A 2k2q_A
Probab=99.37 E-value=1.4e-12 Score=86.46 Aligned_cols=74 Identities=18% Similarity=0.300 Sum_probs=68.3
Q ss_pred CHHHHHHHHHHHHHhhhCCCCCccccCCccccccCCChhhHHHHHHHHHHHhCCcCCccccccCCcHHHHHHHHHcC
Q 033119 47 DKSEVTDRVISVVKNFQKVDPSKVTVNAHFQNDLGLDSLDTVEVVMALEEEFGFEIPDNEADKISTINMAVDFIASH 123 (127)
Q Consensus 47 ~~~~I~~~I~~il~~~l~i~~~~I~~dt~l~~dLGlDSL~~veLi~~lEeefgi~I~~~~l~~~~Tv~~Lv~~I~~~ 123 (127)
+.+++.+.|.++++++++++ +++++++|+ ++|.|||.+++++..|+++||++++..++....|++++++++.+.
T Consensus 11 p~~~~e~~l~~i~~~vL~~~--~i~~~~~Ff-~lGgdSL~a~~l~~~l~~~~g~~l~~~~l~~~~Ti~~la~~i~~~ 84 (91)
T 1dny_A 11 PTNAVESKLAEIWERVLGVS--GIGILDNFF-QIGGHSLKAMAVAAQVHREYQVELPLKVLFAQPTIKALAQYVATR 84 (91)
T ss_dssp CSSHHHHHHHHHHHHHHTCS--SCCSSCCTT-SSCCSSHHHHHHHHHHHHHCCCCCCHHHHHHSCSHHHHHHHHHC-
T ss_pred CCCHHHHHHHHHHHHHhCCC--CCCCCCCHH-HcCCCHHHHHHHHHHHHHHHCCCCCHHHHHcCCCHHHHHHHHHHh
Confidence 45678899999999999985 799999998 999999999999999999999999999999999999999999865
No 40
>2cg5_B Fatty acid synthase; transferase-hydrolase complex, transferase/hydrolase (comple fatty acid biosynthesis, phosphopantetheine transferase; HET: COA; 2.7A {Homo sapiens} PDB: 2png_A
Probab=99.35 E-value=2.1e-12 Score=86.66 Aligned_cols=70 Identities=23% Similarity=0.387 Sum_probs=62.7
Q ss_pred HHHHHHHHhhhCCC-CCccccCCccccccCCChhhHHHHHHHHHHHhCCcCCccccccCCcHHHHHHHHHcCC
Q 033119 53 DRVISVVKNFQKVD-PSKVTVNAHFQNDLGLDSLDTVEVVMALEEEFGFEIPDNEADKISTINMAVDFIASHP 124 (127)
Q Consensus 53 ~~I~~il~~~l~i~-~~~I~~dt~l~~dLGlDSL~~veLi~~lEeefgi~I~~~~l~~~~Tv~~Lv~~I~~~~ 124 (127)
+.|++.++++++++ +++|+++..|. +||+|||+.+||..+||++||+.+|..++... |+++|++++....
T Consensus 9 ~~v~~~va~iLg~~~~~~I~~~~~l~-dLG~DSL~aVELr~~Le~~fgi~lp~~~l~~~-Ti~~La~~v~~~~ 79 (91)
T 2cg5_B 9 RDLVEAVAHILGIRDLAAVNLDSSLA-DLGLDALMSVEVRQTLERELNLVLSVREVRQL-TLRKLQELSSKAD 79 (91)
T ss_dssp TTHHHHHHHHTTCCSCTTSCTTSBTT-TTTCCHHHHHHHHHHHHHHHCCCCCHHHHHTC-BHHHHHHHHHCC-
T ss_pred HHHHHHHHHHHCCCchhhCCCCCCHH-HhCCcchHHHHHHHHHHHHHCCCCCHHHHHhC-CHHHHHHHHhccc
Confidence 46788888999986 58999999995 99999999999999999999999999998775 9999999988654
No 41
>4i4d_A Peptide synthetase NRPS type II-PCP; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MLY; 2.10A {Streptomyces verticillus}
Probab=99.34 E-value=2.5e-12 Score=85.18 Aligned_cols=76 Identities=14% Similarity=0.176 Sum_probs=70.5
Q ss_pred CHHHHHHHHHHHHHhhhCCCCCccccCCccccccCCChhhHHHHHHHHHHHhCCcCCccccccCCcHHHHHHHHHcCCC
Q 033119 47 DKSEVTDRVISVVKNFQKVDPSKVTVNAHFQNDLGLDSLDTVEVVMALEEEFGFEIPDNEADKISTINMAVDFIASHPQ 125 (127)
Q Consensus 47 ~~~~I~~~I~~il~~~l~i~~~~I~~dt~l~~dLGlDSL~~veLi~~lEeefgi~I~~~~l~~~~Tv~~Lv~~I~~~~~ 125 (127)
+.+++.+.|.++++++++++ +++++++|+ ++|.|||.+++++..|+++||+.++..++....|+.+++++|.+...
T Consensus 13 ~~~~~e~~l~~i~~~vL~~~--~i~~~~~Ff-~lGgdSL~a~~l~~~l~~~~g~~l~~~~l~~~pTi~~la~~l~~~~~ 88 (93)
T 4i4d_A 13 RRRALERDIAAIWAETLGRD--SVGPHEDFA-ALGGNSIHAIXITNRVEELVDAELSIRVLLETRTVAGMTDHVHATLT 88 (93)
T ss_dssp HHHHHHHHHHHHHHHHHTCS--CCCTTCCTT-TTTCCHHHHHHHHHHHHHHHTSCCCHHHHHHHCSHHHHHHHHHHHTC
T ss_pred CCCHHHHHHHHHHHHHhCCC--CCCCCCCHH-HcCCcHHHHHHHHHHHHHHhCCCCCHHHHHcCCCHHHHHHHHHHHcc
Confidence 46788999999999999984 799999998 99999999999999999999999999999999999999999987654
No 42
>3tej_A Enterobactin synthase component F; nonribosomal peptide, thioesterase, carrier domain, ATP- BIN enterobactin biosynthesis, ION transport, iron; HET: UF0; 1.90A {Escherichia coli} PDB: 2roq_A
Probab=98.90 E-value=3e-09 Score=83.15 Aligned_cols=76 Identities=14% Similarity=0.176 Sum_probs=68.6
Q ss_pred CCHHHHHHHHHHHHHhhhCCCCCccccCCccccccCCChhhHHHHHHHHHHHhCCcCCccccccCCcHHHHHHHHHcCC
Q 033119 46 LDKSEVTDRVISVVKNFQKVDPSKVTVNAHFQNDLGLDSLDTVEVVMALEEEFGFEIPDNEADKISTINMAVDFIASHP 124 (127)
Q Consensus 46 M~~~~I~~~I~~il~~~l~i~~~~I~~dt~l~~dLGlDSL~~veLi~~lEeefgi~I~~~~l~~~~Tv~~Lv~~I~~~~ 124 (127)
.+++++++.|.+++++++|++ .++.+++|+ ++|.|||.+++++..|+++||++++..++....|+.+++++|.+..
T Consensus 7 ~p~~~~e~~l~~~~~~~l~~~--~i~~~~~ff-~lGgdSl~a~~l~~~l~~~~~~~~~~~~~~~~~t~~~la~~~~~~~ 82 (329)
T 3tej_A 7 APKAGSETIIAAAFSSLLGCD--VQDADADFF-ALGGHXLLAMKLAAQLSRQVARQVTPGQVMVASTVAKLATIIDAEE 82 (329)
T ss_dssp CCCTTHHHHHHHHHHHHHTC---CCSTTCBTT-TTTCCHHHHHHHHHHHHHHHTSCCCHHHHHHCCBHHHHHHHHHSCT
T ss_pred CCCCHHHHHHHHHHHHHhCCC--CCCCCCCHH-HcCCcHHHHHHHHHHHHHHHCCCCCHHHHHhCCCHHHHHHHHHhhc
Confidence 355678899999999999986 489999998 9999999999999999999999999999999999999999998754
No 43
>2cq8_A 10-formyltetrahydrofolate dehydrogenase; 10-FTHFDH, PP-binding, acyl carrier protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.89 E-value=1.8e-09 Score=74.66 Aligned_cols=74 Identities=20% Similarity=0.248 Sum_probs=68.1
Q ss_pred CHHHHHHHHHHHHHhhhC-CCCCccccCCccccccCCChhhHHHHHHHHHHHhC-CcCCccccccCCcHHHHHHHHHcC
Q 033119 47 DKSEVTDRVISVVKNFQK-VDPSKVTVNAHFQNDLGLDSLDTVEVVMALEEEFG-FEIPDNEADKISTINMAVDFIASH 123 (127)
Q Consensus 47 ~~~~I~~~I~~il~~~l~-i~~~~I~~dt~l~~dLGlDSL~~veLi~~lEeefg-i~I~~~~l~~~~Tv~~Lv~~I~~~ 123 (127)
++.++...|.++..++++ . ..|..+++|+ ++|-|||.+++|+..|+++|+ ++++..++....|+++++.+|.++
T Consensus 22 ~~~~~E~~La~iW~~vL~~~--~~i~~~ddFF-~lGG~SLla~rLv~~ir~~~g~v~l~l~~Lf~~pTl~~lA~~l~~~ 97 (110)
T 2cq8_A 22 AELVTAEAVRSVWQRILPKV--LEVEDSTDFF-KSGAASVDVVRLVEEVKELCDGLELENEDVYMASTFGDFIQLLVRK 97 (110)
T ss_dssp THHHHHHHHHHHHHHHCSSC--SCCCTTCBHH-HHHCCTTHHHHHHHHHHHHHTSCCCCHHHHHHCCBHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHhCCC--CCCCCCCCHH-hcCChHHHHHHHHHHHHHHcCCCCcCHHHHHhCCCHHHHHHHHHHH
Confidence 457799999999999998 4 4699999999 999999999999999999999 999999999999999999999754
No 44
>2jgp_A Tyrocidine synthetase 3; multifunctional enzyme, antibiotic biosynthesis, condensatio domain, peptide bond formation, ligase; 1.85A {Brevibacillus brevis}
Probab=98.57 E-value=1.2e-07 Score=77.57 Aligned_cols=75 Identities=24% Similarity=0.278 Sum_probs=68.9
Q ss_pred CCHHHHHHHHHHHHHhhhCCCCCccccCCccccccCCChhhHHHHHHHHHHHhCCcCCccccccCCcHHHHHHHHHcC
Q 033119 46 LDKSEVTDRVISVVKNFQKVDPSKVTVNAHFQNDLGLDSLDTVEVVMALEEEFGFEIPDNEADKISTINMAVDFIASH 123 (127)
Q Consensus 46 M~~~~I~~~I~~il~~~l~i~~~~I~~dt~l~~dLGlDSL~~veLi~~lEeefgi~I~~~~l~~~~Tv~~Lv~~I~~~ 123 (127)
.+++++++.|.+++++++|++ +++.+++|+ ++|.|||.+++++..++++||+.++..++....|+.++++++...
T Consensus 6 ~p~~~~e~~l~~iw~~vL~~~--~i~~~d~ff-~lGgdSl~a~~l~~~~~~~~g~~l~~~~i~~~~ti~~la~~~~~~ 80 (520)
T 2jgp_A 6 APRSVWEARLAQVWEQVLNVP--QVGALDDFF-ALGGHSLRAMRVLSSMHNEYQVDIPLRILFEKPTIQELAAFIEET 80 (520)
T ss_dssp CCCSHHHHHHHHHHHHHHTCS--CCCTTCBTT-TTTCCHHHHHHHHHHHHHHHCBCCCHHHHHHSCBHHHHHHHHHHC
T ss_pred CCCCHHHHHHHHHHHHHhCCC--CCCCCccHH-HhcccHHHHHHHHHHHHHHhCCCcCHHHHhcCCCHHHHHHHHHhh
Confidence 345678899999999999985 689999998 999999999999999999999999999999999999999999764
No 45
>2fq1_A Isochorismatase; ENTB, NRPS, multi-domain, ACP, hydrolase; 2.30A {Escherichia coli}
Probab=98.43 E-value=3.5e-07 Score=71.28 Aligned_cols=70 Identities=16% Similarity=0.131 Sum_probs=62.0
Q ss_pred CCHHHHHHHHHHHHHhhhCCCCCccccCCccccccCCChhhHHHHHHHHHHHhCCcCCccccccCCcHHHHHHHHHc
Q 033119 46 LDKSEVTDRVISVVKNFQKVDPSKVTVNAHFQNDLGLDSLDTVEVVMALEEEFGFEIPDNEADKISTINMAVDFIAS 122 (127)
Q Consensus 46 M~~~~I~~~I~~il~~~l~i~~~~I~~dt~l~~dLGlDSL~~veLi~~lEeefgi~I~~~~l~~~~Tv~~Lv~~I~~ 122 (127)
++++ ++++.+++.+ +++++++++.+|. ++|+||+.++.|+..+++. |++++..++....|++++.+++.+
T Consensus 215 l~~d----wlr~~va~~L-~~~~~i~~~~nL~-~lGlDSi~~m~l~~~~~~~-g~~~~~~~l~~~ptl~~~~~~l~~ 284 (287)
T 2fq1_A 215 ASKA----ALREVILPLL-DESDEPFDDDNLI-DYGLDSVRMMALAARWRKV-HGDIDFVMLAKNPTIDAWWKLLSR 284 (287)
T ss_dssp SSHH----HHHHHHGGGC-CCSSCCCTTSCSG-GGTCCTTHHHHHHHHHTTT-CTTCCHHHHHTSCSHHHHHHHHHC
T ss_pred cCHH----HHHHHHHHHh-CCHhhcCCCCCHH-HhCccHHHHHHHHHHHHHc-CCCCCHHHHHhCccHHHHHHHHHh
Confidence 5554 4556677778 7888999999997 9999999999999999998 999999999999999999999983
No 46
>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}
Probab=98.29 E-value=8.7e-08 Score=79.07 Aligned_cols=74 Identities=24% Similarity=0.400 Sum_probs=0.0
Q ss_pred CHHHHHHHHHHHHHhhhCCCCCccccCCccccccCCChhhHHHHHHHHHHHhCCcCCccccccCCcHHHHHHHHHcCC
Q 033119 47 DKSEVTDRVISVVKNFQKVDPSKVTVNAHFQNDLGLDSLDTVEVVMALEEEFGFEIPDNEADKISTINMAVDFIASHP 124 (127)
Q Consensus 47 ~~~~I~~~I~~il~~~l~i~~~~I~~dt~l~~dLGlDSL~~veLi~~lEeefgi~I~~~~l~~~~Tv~~Lv~~I~~~~ 124 (127)
+.+++++.|.++++++++++ .+..+++|+ ++|.|||.+++|+..|++ ||+.++..++....|+.+|+++|.+..
T Consensus 42 p~~~~e~~l~~~w~~~l~~~--~i~~~~~ff-~lGg~Sl~a~~l~~~~~~-~~~~~~~~~~~~~~t~~~la~~~~~~~ 115 (508)
T 4f6l_B 42 PSNEIEQTFVDVFGEVLKQN--DVGVDDDFF-ELGGNSLEAMLVVSHLKR-FGHHISMQTLYQYKTVRQIVNYMYQNQ 115 (508)
T ss_dssp ------------------------------------------------------------------------------
T ss_pred CCCHHHHHHHHHHHHHhCCC--CCCCCCChH-HcCchHHHHHHHHHHHHH-cCCCccHHHHhcCCcHHHHHHHHHhhc
Confidence 56778899999999999986 799999999 999999999999999986 999999999999999999999997654
No 47
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}
Probab=98.22 E-value=1.2e-06 Score=79.72 Aligned_cols=76 Identities=13% Similarity=0.257 Sum_probs=69.3
Q ss_pred CCHHHHHHHHHHHHHhhhCCCCCccccCCccccccCCChhhHHHHHHHHHHHhCCcCCccccccCCcHHHHHHHHHcCC
Q 033119 46 LDKSEVTDRVISVVKNFQKVDPSKVTVNAHFQNDLGLDSLDTVEVVMALEEEFGFEIPDNEADKISTINMAVDFIASHP 124 (127)
Q Consensus 46 M~~~~I~~~I~~il~~~l~i~~~~I~~dt~l~~dLGlDSL~~veLi~~lEeefgi~I~~~~l~~~~Tv~~Lv~~I~~~~ 124 (127)
-+++++++.|.+++++++|++ .++.+++|+ ++|.|||.+++|+..|+++||++++..++....|+.+|++++....
T Consensus 968 ~p~~~~e~~l~~~~~~vL~~~--~i~~~~~ff-~lGg~Sl~a~~l~~~l~~~~g~~l~~~~~~~~~ti~~la~~~~~~~ 1043 (1304)
T 2vsq_A 968 GPRNEMEETIAQIWSEVLGRK--QIGIHDDFF-ALGGHALKAMTAASRIKKELGIDLPVKLLFEAPTIAGISAYLKNGG 1043 (1304)
T ss_dssp CCSSHHHHHHHHHHHHHHTCS--CCCTTCCTT-TTTCCHHHHHHHHHHSSSTTSCCCCSSCTTTCCSHHHHHHHHHHTT
T ss_pred CCCChHHHHHHHHHHHHcCCC--ccCCCCCHH-HhCCChHHHHHHHHHHHHHhCCCCCHHHHHhCCCHHHHHHHHHhcC
Confidence 356778899999999999974 689999998 9999999999999999999999999999999999999999997643
No 48
>4dg8_A PA1221; ANL superfamily, adenylation domain, peptidyl carrier protei ribosomal peptide synthetase, NRPS, valine adenylation, LIG; HET: AMP; 2.15A {Pseudomonas aeruginosa} PDB: 4dg9_A*
Probab=98.06 E-value=5.7e-07 Score=76.33 Aligned_cols=75 Identities=12% Similarity=0.081 Sum_probs=0.0
Q ss_pred CHHHHHHHHHHHHHhhhCCCCCccccCCccccccCCChhhHHHHHHHHHH-HhCCcCCccccccCCcHHHHHHHHHcCC
Q 033119 47 DKSEVTDRVISVVKNFQKVDPSKVTVNAHFQNDLGLDSLDTVEVVMALEE-EFGFEIPDNEADKISTINMAVDFIASHP 124 (127)
Q Consensus 47 ~~~~I~~~I~~il~~~l~i~~~~I~~dt~l~~dLGlDSL~~veLi~~lEe-efgi~I~~~~l~~~~Tv~~Lv~~I~~~~ 124 (127)
..+..++.+.++++++++++ .+..+++|+ ++|.|||.+++|+..|++ .||+.++..++....|+.+|+++|.+..
T Consensus 521 ~~~~~e~~l~~iw~~vL~~~--~~~~~d~Ff-~lGGdSl~a~~l~~~l~~~~~~~~l~~~~~f~~pti~~la~~l~~~~ 596 (620)
T 4dg8_A 521 ALDPDQRGCAQLWSELLGCE--VGAADQDFF-LCGGNSLLALQLVALCQSAGAGANLGLADLQANSRLDQFSRLLRSHG 596 (620)
T ss_dssp -------------------------------------------------------------------------------
T ss_pred CCCHHHHHHHHHHHHHhCCC--CCCCCCChh-hccCcHHHHHHHHHHHHhhCCCCCcCHHHHhcCCCHHHHHHHHHhcC
Confidence 44567788999999999875 578888999 999999999999999999 8999999999999999999999998653
No 49
>3rg2_A Enterobactin synthase component E (ENTE), 2,3-DIH dihydroxybenzoate synthetase, isochroismatase...; adenylate-forming enzymes, ANL superfamily; HET: SVS PNS; 3.10A {Escherichia coli}
Probab=98.00 E-value=8.1e-06 Score=68.68 Aligned_cols=70 Identities=14% Similarity=0.110 Sum_probs=59.2
Q ss_pred HHHHHHHHHhhhCCCCCccccCCccccccCCChhhHHHHHHHHHHHhCCcCCccccccCCcHHHHHHHHHcCC
Q 033119 52 TDRVISVVKNFQKVDPSKVTVNAHFQNDLGLDSLDTVEVVMALEEEFGFEIPDNEADKISTINMAVDFIASHP 124 (127)
Q Consensus 52 ~~~I~~il~~~l~i~~~~I~~dt~l~~dLGlDSL~~veLi~~lEeefgi~I~~~~l~~~~Tv~~Lv~~I~~~~ 124 (127)
.+.+.+++.++++. .+++..+++|+ ++|.|||.+++|...|++ ++++++..++....|+.+|+++|.+.+
T Consensus 547 ~~~l~~~~~~~l~~-~~~~~~~d~Ff-~lGgdSl~a~~l~~~l~~-~~~~~~~~~~~~~pti~~la~~l~~~~ 616 (617)
T 3rg2_A 547 KAALREVILPLLDE-SDEPFDDDNLI-DYGLDSVRMMALAARWRK-VHGDIDFVMLAKNPTIDAWWKLLSREV 616 (617)
T ss_dssp HHHHHHHHGGGSCT-TCCCCTTSCGG-GGTCCHHHHHHHHHHHHT-TSTTCCHHHHHHSCCHHHHHHHHCC--
T ss_pred HHHHHHHHHHHhcc-CCCCCCCCChh-hcCccHHHHHHHHHHHHH-hcCCCCHHHHhcCCCHHHHHHHHHhhc
Confidence 45677777787763 34688899998 999999999999999987 788999999999999999999998754
No 50
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=97.19 E-value=5.4e-05 Score=73.57 Aligned_cols=70 Identities=21% Similarity=0.322 Sum_probs=0.0
Q ss_pred HHHHHHHHHhhhCCC-CCccccCCccccccCCChhhHHHHHHHHHHHhCCcCCccccccCCcHHHHHHHHHcC
Q 033119 52 TDRVISVVKNFQKVD-PSKVTVNAHFQNDLGLDSLDTVEVVMALEEEFGFEIPDNEADKISTINMAVDFIASH 123 (127)
Q Consensus 52 ~~~I~~il~~~l~i~-~~~I~~dt~l~~dLGlDSL~~veLi~~lEeefgi~I~~~~l~~~~Tv~~Lv~~I~~~ 123 (127)
.+.+.++++++++++ .++++++.+|. ++|+|||..++|...|+++||+.++..++.+ .|+..+++++...
T Consensus 2125 ~~~l~~~~a~vL~~~~~~~i~~~~~~~-~lG~DSL~avelr~~i~~~~~~~l~~~~i~~-~t~~~la~~~~~~ 2195 (2512)
T 2vz8_A 2125 QKDLVKAVAHILGIRDVASINPDSTLV-DLGLDSLMGVEVRQILEREHDLVLSMREVRQ-LSLRKLQELSSKT 2195 (2512)
T ss_dssp -------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHhCCCcccccCCCCchH-HhCcchHHHHHHHHHHHHHhCCcccHHHHHh-hhHHHHHHHHhhc
Confidence 456888888889986 57899999997 9999999999999999999999999998866 6888888776543
No 51
>2px6_A Thioesterase domain; thioesaterse domain, orlistat, fatty acid synthase, drug complex, tetrahydrolipstatin, transferase; HET: DH9; 2.30A {Homo sapiens}
Probab=92.44 E-value=0.0082 Score=45.80 Aligned_cols=37 Identities=5% Similarity=-0.221 Sum_probs=8.7
Q ss_pred CCChhhHHHHHHHHHHHhCCcCCccccccCCcHHHHH
Q 033119 81 GLDSLDTVEVVMALEEEFGFEIPDNEADKISTINMAV 117 (127)
Q Consensus 81 GlDSL~~veLi~~lEeefgi~I~~~~l~~~~Tv~~Lv 117 (127)
|.|||.+++++..|+++||++++..++.+..|+..++
T Consensus 1 GGdSL~a~~l~~rl~~~~g~~l~~~~lf~~pt~~~l~ 37 (316)
T 2px6_A 1 GSHNLACPTPKEDGLAQQQTQLNLRSLLVNPEGPTLM 37 (316)
T ss_dssp -------------------------CCCCCTTSCSEE
T ss_pred CCchHHHHHHHHHHHHHHhhccchhhhhcCCCcCeeE
Confidence 7899999999999999999999999988887776543
No 52
>1q1v_A DEK protein; winged-helix motif, DNA binding protein; NMR {Homo sapiens} SCOP: a.159.4.1
Probab=70.98 E-value=11 Score=23.23 Aligned_cols=45 Identities=7% Similarity=0.273 Sum_probs=34.3
Q ss_pred CCCCCHHHHHHHHHHHHHhhhCCCCCccccCCccccccCCChhhHHHHHHHHHHHh-CCcCCcc
Q 033119 43 GSFLDKSEVTDRVISVVKNFQKVDPSKVTVNAHFQNDLGLDSLDTVEVVMALEEEF-GFEIPDN 105 (127)
Q Consensus 43 ~~~M~~~~I~~~I~~il~~~l~i~~~~I~~dt~l~~dLGlDSL~~veLi~~lEeef-gi~I~~~ 105 (127)
.+..+.++|...|.++|+. -.++++..=.+...+|+.| |+++...
T Consensus 9 ~~~Psd~ei~~~I~~IL~~------------------aDL~tvT~K~VR~~Le~~~pg~dLs~k 54 (70)
T 1q1v_A 9 KKPPTDEELKETIKKLLAS------------------ANLEEVTMKQICKKVYENYPTYDLTER 54 (70)
T ss_dssp CCCCCHHHHHHHHHHHHTT------------------SCGGGCCHHHHHHHHHHHCSSSCCSHH
T ss_pred cCCcCHHHHHHHHHHHHHh------------------CCHHHHhHHHHHHHHHHHccCCCChHH
Confidence 3456899999999999863 1244666677889999999 9988754
No 53
>1dd4_C 50S ribosomal protein L7/L12; dimer formation, flexibility, hinge region, four-helix- bundle, five-helix- bundle, alpha-beta structure; HET: TBR; 2.40A {Thermotoga maritima} SCOP: a.108.1.1
Probab=65.92 E-value=6.3 Score=21.85 Aligned_cols=20 Identities=35% Similarity=0.576 Sum_probs=16.6
Q ss_pred CChhhHHHHHHHHHHHhCCc
Q 033119 82 LDSLDTVEVVMALEEEFGFE 101 (127)
Q Consensus 82 lDSL~~veLi~~lEeefgi~ 101 (127)
+.=+.+.+|+..+|++||++
T Consensus 13 lTvlE~~eLvk~leekfGVs 32 (40)
T 1dd4_C 13 LTVSELAELVKKLEDKFGVT 32 (40)
T ss_dssp SCHHHHHHHHHHHHHHTCCC
T ss_pred CcHHHHHHHHHHHHHHHCCC
Confidence 34567789999999999996
No 54
>1v32_A AT5G08430, hypothetical protein RAFL09-47-K03; SWI/SNF complex subunit, structural genomics; NMR {Arabidopsis thaliana} SCOP: a.42.1.1
Probab=65.69 E-value=5.2 Score=26.49 Aligned_cols=57 Identities=14% Similarity=0.199 Sum_probs=47.4
Q ss_pred CCCCHHHHHHHHHHHHHhh-hCC--CCCccccCCccccccCCChhhHHHHHHHHHHHhCC
Q 033119 44 SFLDKSEVTDRVISVVKNF-QKV--DPSKVTVNAHFQNDLGLDSLDTVEVVMALEEEFGF 100 (127)
Q Consensus 44 ~~M~~~~I~~~I~~il~~~-l~i--~~~~I~~dt~l~~dLGlDSL~~veLi~~lEeefgi 100 (127)
..|++.++...|+++|.+. +.- +...|-.|..|..-+|-|++.+.++...|...|--
T Consensus 33 ~~~sR~eVvk~lW~YIK~nnLQdp~~Kr~I~cD~kLk~lFg~~~v~~~~m~klL~~Hl~~ 92 (101)
T 1v32_A 33 EMISRYDVSDTIAKYISKEGLLDPSNKKKVVCDKRLVLLFGTRTIFRMKVYDLLEKHYKE 92 (101)
T ss_dssp SCCCHHHHHHHHHHHHHHHTCBCSSCTTEEECCSHHHHHTCCSEEETTHHHHHHHHHSCS
T ss_pred cccCHHHHHHHHHHHHHhhcCcCcccCCeeeccHHHHHHHCCCcccHHHHHHHHHHHcCc
Confidence 4699999999999999876 432 34468889988878999999999999999888754
No 55
>3s93_A Tudor domain-containing protein 5; structural genomics consortium, SGC, transcription; 2.28A {Homo sapiens}
Probab=63.62 E-value=16 Score=24.11 Aligned_cols=19 Identities=0% Similarity=0.223 Sum_probs=15.9
Q ss_pred CCCHHHHHHHHHHHHHhhh
Q 033119 45 FLDKSEVTDRVISVVKNFQ 63 (127)
Q Consensus 45 ~M~~~~I~~~I~~il~~~l 63 (127)
+|+++++.+.|+.+|..++
T Consensus 2 ~~~~~~~l~~vkk~irslL 20 (102)
T 3s93_A 2 MSEQERIQECLRKEIRSLL 20 (102)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHHhh
Confidence 5778899999999988875
No 56
>1zav_U 50S ribosomal protein L7/L12; ribosome structure and function, L10-L12 complex structure, L10E structure, L7/12 ribosomal stalk; 1.90A {Thermotoga maritima} SCOP: a.108.1.1 PDB: 1zaw_U 1zax_U 1dd3_C
Probab=56.15 E-value=9 Score=19.88 Aligned_cols=16 Identities=38% Similarity=0.636 Sum_probs=12.9
Q ss_pred hhhHHHHHHHHHHHhC
Q 033119 84 SLDTVEVVMALEEEFG 99 (127)
Q Consensus 84 SL~~veLi~~lEeefg 99 (127)
=+.+.+|+..+|+.||
T Consensus 15 vlEl~eLvk~lEe~fG 30 (30)
T 1zav_U 15 VSELAELVKKLEDKFG 30 (30)
T ss_dssp HHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHhC
Confidence 3567788999999987
No 57
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*
Probab=55.11 E-value=2.5 Score=42.57 Aligned_cols=53 Identities=11% Similarity=0.180 Sum_probs=0.0
Q ss_pred HHHHHHHHHHhhhCCCCCccccCCcccccc-CCChhhHHHHHHHHHHHhCCcCCc
Q 033119 51 VTDRVISVVKNFQKVDPSKVTVNAHFQNDL-GLDSLDTVEVVMALEEEFGFEIPD 104 (127)
Q Consensus 51 I~~~I~~il~~~l~i~~~~I~~dt~l~~dL-GlDSL~~veLi~~lEeefgi~I~~ 104 (127)
..+.+..+++..++..+++|.++..+. +| |.+|...-||+.+|+.+||..+|+
T Consensus 1795 a~~~~~~liA~~~k~~~~~i~~~~~i~-~L~gg~St~~nell~dl~~efg~~~p~ 1848 (3089)
T 3zen_D 1795 AADATVALIALSAKMRIDQIEALDSIE-SITDGASSRRNQLLVDLGSELNLGAID 1848 (3089)
T ss_dssp -------------------------------------------------------
T ss_pred HHHHHHHHHHHHhCCChhHCCccccHH-HHhCCchHHHHHHHHHHHHHhCCCCCC
Confidence 466688888888999999999999997 65 999999999999999999996654
No 58
>1v31_A Hypothetical protein RAFL11-05-P19; SWI/SNF complex subunit, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: a.42.1.1
Probab=51.32 E-value=3.8 Score=26.58 Aligned_cols=56 Identities=18% Similarity=0.226 Sum_probs=44.8
Q ss_pred CCCCHHHHHHHHHHHHHhh-hCC--CCCccccCCccccccCCChhhHHHHHHHHHHHhC
Q 033119 44 SFLDKSEVTDRVISVVKNF-QKV--DPSKVTVNAHFQNDLGLDSLDTVEVVMALEEEFG 99 (127)
Q Consensus 44 ~~M~~~~I~~~I~~il~~~-l~i--~~~~I~~dt~l~~dLGlDSL~~veLi~~lEeefg 99 (127)
..+++.++...|++.|.+. +.- +...|.-|..|..-+|-|++.+.++...|...|-
T Consensus 25 ~~~sr~evvk~lW~YIK~n~Lqdp~~k~~I~cD~~L~~lfg~~~v~~~~~~klL~~Hl~ 83 (93)
T 1v31_A 25 EVETRPRIIAAIWHYVKARKLQNPNDPSFFNCDAALQKVFGEEKLKFTMVSQKISHHLS 83 (93)
T ss_dssp SEECSHHHHHHHHHHHHHTTCBCSSCSSEEECCSHHHHHSCSSEEETTTTHHHHHHHCB
T ss_pred CccCHHHHHHHHHHHHHHccCcCcccCceeehhHHHHHHhCCCcccHHHHHHHHHHhcC
Confidence 4689999999999999876 432 2335888888887889999999998888877664
No 59
>1uhr_A SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily...; structural genomics, chromatin remodeling; NMR {Mus musculus} SCOP: a.42.1.1
Probab=51.31 E-value=5.2 Score=25.91 Aligned_cols=56 Identities=9% Similarity=0.051 Sum_probs=45.1
Q ss_pred CCCCHHHHHHHHHHHHHhh-hCC--CCCccccCCccccccCCChhhHHHHHHHHHHHhC
Q 033119 44 SFLDKSEVTDRVISVVKNF-QKV--DPSKVTVNAHFQNDLGLDSLDTVEVVMALEEEFG 99 (127)
Q Consensus 44 ~~M~~~~I~~~I~~il~~~-l~i--~~~~I~~dt~l~~dLGlDSL~~veLi~~lEeefg 99 (127)
..+++.++...|++.|.+. +.- +...|.-|..|..-+|-|++.+.++...|...|.
T Consensus 25 ~~~sr~evvk~lW~YIK~n~Lqdp~~k~~I~cD~~Lk~lfg~~~v~~~~~~klL~~Hl~ 83 (93)
T 1uhr_A 25 HTQTRPVIIQALWQYIKTHKLQDPHEREFVLCDKYLQQIFESQRMKFSEIPQRLHALLM 83 (93)
T ss_dssp SEEEHHHHHHHHHHHHHHTTCBCSSCSSEECCCTTHHHHTCCSSEEGGGSHHHHHHHEE
T ss_pred CccCHHHHHHHHHHHHHhccCCCccccceeechHHHHHHhCCCcccHHHHHHHHHHhcC
Confidence 4689999999999999876 432 2346888888887889999999888888877664
No 60
>2pls_A CBS domain protein; APC86064.2, CORC/HLYC transporter associated domain, CBS DOM protein, structural genomics, PSI-2 structure initiative; 2.15A {Chlorobium tepidum tls} SCOP: d.145.1.4
Probab=46.63 E-value=39 Score=20.73 Aligned_cols=34 Identities=18% Similarity=0.401 Sum_probs=23.4
Q ss_pred HHHHHHHhCCc-CCccccccCCcHHHHHHHHHcCC
Q 033119 91 VMALEEEFGFE-IPDNEADKISTINMAVDFIASHP 124 (127)
Q Consensus 91 i~~lEeefgi~-I~~~~l~~~~Tv~~Lv~~I~~~~ 124 (127)
+..+++.||+. +|.++...+.|++.++-....+.
T Consensus 19 l~dl~~~l~~~~l~~~~~~~~~Tl~G~i~~~lg~i 53 (86)
T 2pls_A 19 VPELKDTLGLRAVPEEEKGVYHTLSGMIMWLLGRL 53 (86)
T ss_dssp HHHHHHHHTCSCCTTTTSCSCCBHHHHHHHHHTSC
T ss_pred HHHHHHHhCCCcCCCccCCCcccHHHHHHHHhCCC
Confidence 45678889998 88632236789988876655543
No 61
>2oai_A Hemolysin; PFAM03471, xylella fastidiosa temecula1, structur genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; HET: MLY; 1.80A {Xylella fastidiosa} SCOP: d.145.1.4 PDB: 2r8d_A*
Probab=46.15 E-value=31 Score=21.73 Aligned_cols=34 Identities=24% Similarity=0.275 Sum_probs=19.7
Q ss_pred HHHHHHHhCCcCCccccccCCcHHHHHHHHHcCC
Q 033119 91 VMALEEEFGFEIPDNEADKISTINMAVDFIASHP 124 (127)
Q Consensus 91 i~~lEeefgi~I~~~~l~~~~Tv~~Lv~~I~~~~ 124 (127)
+..+++.||+.+|.++-..+.|++.++-....++
T Consensus 28 l~dl~~~l~~~l~~~~~~~~dTlgG~i~~~lg~i 61 (94)
T 2oai_A 28 IEELREVLGAELPDGEENNYHTLAGMCISYFGRI 61 (94)
T ss_dssp HHHHHHHHTC-------CCCSBHHHHHHHHHSSC
T ss_pred HHHHHHHhCCCCCcccCCCCccHHHHHHHHhCCC
Confidence 4577888999998632236789998876655544
No 62
>3llb_A Uncharacterized protein; protein PA3983, unknown function, structural genomics, PSI2, MCSG, protein structure initiative; 1.80A {Pseudomonas aeruginosa} SCOP: d.145.1.0
Probab=41.30 E-value=51 Score=20.09 Aligned_cols=31 Identities=29% Similarity=0.308 Sum_probs=22.4
Q ss_pred HHHHHHHhCCcCCccccccCCcHHHHHHHHHcCC
Q 033119 91 VMALEEEFGFEIPDNEADKISTINMAVDFIASHP 124 (127)
Q Consensus 91 i~~lEeefgi~I~~~~l~~~~Tv~~Lv~~I~~~~ 124 (127)
+..+++.||+.+|.+ .+.|++.++-....+.
T Consensus 19 l~dl~~~l~~~l~~~---~~~Tl~G~i~~~lg~i 49 (83)
T 3llb_A 19 VDAFNDFFGSEFSDE---EFDTVGGLVMSAFGHL 49 (83)
T ss_dssp HHHHHHHHCCCCCTT---TCSBHHHHHHHHHSSC
T ss_pred HHHHHHHhCCCCCCC---CCcCHHHHHHHHhCcC
Confidence 357888999999854 5679988876655544
No 63
>1wot_A Putative minimal nucleotidyltransferase; alpha and beta, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Thermus thermophilus} SCOP: d.218.1.5
Probab=40.70 E-value=65 Score=20.12 Aligned_cols=62 Identities=19% Similarity=0.214 Sum_probs=35.3
Q ss_pred CCCCCHHHHHHHHHHHHHhh---hCCC---------CCccccCCcc--cc--ccCCChhhHHHHHHHHHHHhCCcCCcc
Q 033119 43 GSFLDKSEVTDRVISVVKNF---QKVD---------PSKVTVNAHF--QN--DLGLDSLDTVEVVMALEEEFGFEIPDN 105 (127)
Q Consensus 43 ~~~M~~~~I~~~I~~il~~~---l~i~---------~~~I~~dt~l--~~--dLGlDSL~~veLi~~lEeefgi~I~~~ 105 (127)
|+.|++ ++.+.+++.+... .++. -++.++++++ .= .-+.+-....++...+++.+|..++--
T Consensus 1 ~~~m~~-~~l~~l~~~i~~l~~~~~v~~v~LFGS~arG~~~~~SDiDl~V~~~~~~~~~~~~~l~~~l~~~l~~~vDlv 78 (98)
T 1wot_A 1 GSHMDL-ETLRARREAVLSLCARHGAVRVRVFGSVARGEAREDSDLDLLVAFEEGRTLLDHARLKLALEGLLGVRVDIV 78 (98)
T ss_dssp CCCCCH-HHHHHHHHHHHHHHHHHTCSSCEECSHHHHTCCCTTCCCEEEECCCSSCCHHHHHHHHHHHHHHSCSCCEEE
T ss_pred CCcCCH-HHHHHHHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCEEEEEEeCCCCCHHHHHHHHHHHHHHcCCCEEEE
Confidence 567988 8888777776644 2221 1122333322 10 112344567788889999888765443
No 64
>2rk5_A Putative hemolysin; structural genomics, PSI-2, MCSG, protein structure initiative, midwest center for structural genomics, membrane; 1.50A {Streptococcus mutans UA159} SCOP: d.145.1.4
Probab=39.70 E-value=53 Score=20.17 Aligned_cols=31 Identities=13% Similarity=0.060 Sum_probs=22.3
Q ss_pred HHHHHHHhCCcCCccccccCCcHHHHHHHHHcCC
Q 033119 91 VMALEEEFGFEIPDNEADKISTINMAVDFIASHP 124 (127)
Q Consensus 91 i~~lEeefgi~I~~~~l~~~~Tv~~Lv~~I~~~~ 124 (127)
+..+++.||+.+|.+ .+.|++.++-....+.
T Consensus 18 l~dl~~~l~~~l~~~---~~dTl~G~v~~~lg~i 48 (87)
T 2rk5_A 18 LNDFNEYFETDLESD---NVDTIAGFYLTGVGTI 48 (87)
T ss_dssp HHHHHHHHTCCCCCT---TCCBHHHHHHHHHCSC
T ss_pred HHHHHHHhCCCCCCC---CcccHHHHHHHHhCcC
Confidence 456788899999864 4778888876555443
No 65
>3lae_A UPF0053 protein HI0107; APC85784.2, conserved protein, haemophilus influenzae RD KW20, structural genomics, PSI-2; HET: MSE; 1.45A {Haemophilus influenzae} SCOP: d.145.1.4 PDB: 2o1r_A*
Probab=38.74 E-value=47 Score=20.18 Aligned_cols=30 Identities=17% Similarity=0.180 Sum_probs=21.2
Q ss_pred HHHHHHHhCCcCCccccccCCcHHHHHHHHHcC
Q 033119 91 VMALEEEFGFEIPDNEADKISTINMAVDFIASH 123 (127)
Q Consensus 91 i~~lEeefgi~I~~~~l~~~~Tv~~Lv~~I~~~ 123 (127)
+..+++.||+.+|.+ .+.|++.++-....+
T Consensus 19 l~dl~~~l~~~l~~~---~~~Tl~G~i~~~lg~ 48 (81)
T 3lae_A 19 LRDLNKMFNWELDTE---DARTFNGLILEHLEE 48 (81)
T ss_dssp HHHHHHHHCCCCCCS---SCSBHHHHHHHHCSS
T ss_pred HHHHHHHhCCCCCCC---CCccHHHHHHHHhCC
Confidence 447888999999854 467888876554443
No 66
>2p3h_A Uncharacterized CBS domain-containing protein; structural genomics, CORC_HLYC, PFAM03471, putative transpor protein; 1.80A {Corynebacterium glutamicum} SCOP: d.145.1.4
Probab=38.54 E-value=56 Score=21.11 Aligned_cols=31 Identities=23% Similarity=0.301 Sum_probs=22.5
Q ss_pred HHHHHHHhCCcCCccccccCCcHHHHHHHHHcCC
Q 033119 91 VMALEEEFGFEIPDNEADKISTINMAVDFIASHP 124 (127)
Q Consensus 91 i~~lEeefgi~I~~~~l~~~~Tv~~Lv~~I~~~~ 124 (127)
+.++++.||++++.+ .+.|++.++-....+.
T Consensus 22 l~dl~~~lg~~l~~e---~~dTlgGli~~~lg~i 52 (101)
T 2p3h_A 22 LDEVERAIGYELPEG---DYETISGLLFDHANAL 52 (101)
T ss_dssp HHHHHHHHTSCCCCS---SCCBHHHHHHHHHCSC
T ss_pred HHHHHHHhCCCCCCC---CCccHHHHHHHHhCCC
Confidence 456788899999764 5789988876655543
No 67
>3ded_A Probable hemolysin; structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG, membrane; HET: MSE; 2.14A {Chromobacterium violaceum} SCOP: d.145.1.4
Probab=38.53 E-value=59 Score=21.31 Aligned_cols=34 Identities=18% Similarity=0.287 Sum_probs=24.8
Q ss_pred HHHHHHHhCCc--CCccccccCCcHHHHHHHHHcCC
Q 033119 91 VMALEEEFGFE--IPDNEADKISTINMAVDFIASHP 124 (127)
Q Consensus 91 i~~lEeefgi~--I~~~~l~~~~Tv~~Lv~~I~~~~ 124 (127)
+..+++.||+. +|.++-..+.|++.++-....++
T Consensus 45 l~dl~e~lg~~~~l~~~~~~~~dTlgGlil~~lg~i 80 (113)
T 3ded_A 45 LDRFREFFELEAPLPGEAGGNIHTLAGVMLYQLGRV 80 (113)
T ss_dssp HHHHHHHTTCCSCCTTGGGTCCCBHHHHHHHHHCSS
T ss_pred HHHHHHHhCCCccCCcccCCCCccHHHHHHHHhCCC
Confidence 46788999998 88643356889998876665544
No 68
>2r2z_A Hemolysin; APC85144, enterococcus faecalis V583, STRU initiative, midwest center for structural genomics, MCSG; 1.20A {Enterococcus faecalis} SCOP: d.145.1.4
Probab=34.85 E-value=70 Score=19.78 Aligned_cols=31 Identities=10% Similarity=0.060 Sum_probs=22.6
Q ss_pred HHHHHHHhCCcCCccccccCCcHHHHHHHHHcCC
Q 033119 91 VMALEEEFGFEIPDNEADKISTINMAVDFIASHP 124 (127)
Q Consensus 91 i~~lEeefgi~I~~~~l~~~~Tv~~Lv~~I~~~~ 124 (127)
+..+++.||+.+|.+ .+.|++.++-....+.
T Consensus 26 l~dl~~~l~~~l~~~---~~~TlgG~i~~~lg~i 56 (93)
T 2r2z_A 26 IDEFNEVFETDLHMS---DVDTMAGYLITALGTI 56 (93)
T ss_dssp HHHHHHHHTCCCCCT---TCCBHHHHHHHHHSSC
T ss_pred HHHHHHHhCCCCCCC---CcccHHHHHHHHhCCC
Confidence 456788899999864 4789988876655543
No 69
>2pli_A Uncharacterized protein; CORC-associated region, MCSG, PSI2, structural genomics, Pro structure initiative; 1.70A {Neisseria meningitidis} SCOP: d.145.1.4
Probab=34.85 E-value=72 Score=19.75 Aligned_cols=31 Identities=23% Similarity=0.184 Sum_probs=22.6
Q ss_pred HHHHHHHhCCcCCccccccCCcHHHHHHHHHcCC
Q 033119 91 VMALEEEFGFEIPDNEADKISTINMAVDFIASHP 124 (127)
Q Consensus 91 i~~lEeefgi~I~~~~l~~~~Tv~~Lv~~I~~~~ 124 (127)
+..+++.||+.+|.+ .+.|++.++-....+.
T Consensus 28 l~dl~~~l~~~l~~~---~~dTlgG~i~~~lg~i 58 (91)
T 2pli_A 28 IEDINTFFGTEYSSE---EADTIGGLVIQELGHL 58 (91)
T ss_dssp HHHHHHHHCCCCCCS---SCCBHHHHHHHHHSSC
T ss_pred HHHHHHHhCCCCCCC---CCccHHHHHHHHhCCC
Confidence 456788899999864 5779988876655544
No 70
>2p13_A CBS domain; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; 1.65A {Nitrosomonas europaea} SCOP: d.145.1.4
Probab=34.81 E-value=75 Score=19.59 Aligned_cols=33 Identities=12% Similarity=0.109 Sum_probs=23.0
Q ss_pred HHHHHHHhCCcCCccccccCCcHHHHHHHHHcCC
Q 033119 91 VMALEEEFGFEIPDNEADKISTINMAVDFIASHP 124 (127)
Q Consensus 91 i~~lEeefgi~I~~~~l~~~~Tv~~Lv~~I~~~~ 124 (127)
+..+++.||+.+|.+ -..+.|++.++-....+.
T Consensus 25 l~dl~~~l~~~l~~~-~~~~~TlgG~i~~~lg~i 57 (90)
T 2p13_A 25 IRKASNLLEHDLVDE-AERYSTLGGYLLWQFGYI 57 (90)
T ss_dssp HHHHHHHHTSCCCCT-TCCCCBHHHHHHHHHSSC
T ss_pred HHHHHHHHCCCCCCc-CCCCccHHHHHHHHhCCC
Confidence 456788899999863 125789988876655443
No 71
>3m20_A 4-oxalocrotonate tautomerase, putative; DMPI, thermophIle, beta-alpha-beta, catalytic proline, isomerase; 2.37A {Archaeoglobus fulgidus}
Probab=34.78 E-value=40 Score=19.23 Aligned_cols=25 Identities=32% Similarity=0.441 Sum_probs=20.4
Q ss_pred CHHHHHHHHHHHHHhhhCCCCCccc
Q 033119 47 DKSEVTDRVISVVKNFQKVDPSKVT 71 (127)
Q Consensus 47 ~~~~I~~~I~~il~~~l~i~~~~I~ 71 (127)
.+.++.+.|.+.+.+.+|++++.+.
T Consensus 14 qK~~L~~~it~~~~~~lg~~~~~v~ 38 (62)
T 3m20_A 14 KKREFVERLTSVAAEIYGMDRSAIT 38 (62)
T ss_dssp HHHHHHHHHHHHHHHHHTCCTTSCE
T ss_pred HHHHHHHHHHHHHHHHhCcCcceEE
Confidence 4678889999999999999877643
No 72
>2p4p_A Hypothetical protein HD1797; CORC_HLYC, PFAM: PF03471, structural GE PSI-2, protein structure initiative, midwest center for STR genomics; HET: MLY MSE; 1.80A {Haemophilus ducreyi} SCOP: d.145.1.4
Probab=33.88 E-value=77 Score=19.34 Aligned_cols=32 Identities=13% Similarity=0.214 Sum_probs=22.0
Q ss_pred HHHHHHHhCCc-CCccccccCCcHHHHHHHHHcCC
Q 033119 91 VMALEEEFGFE-IPDNEADKISTINMAVDFIASHP 124 (127)
Q Consensus 91 i~~lEeefgi~-I~~~~l~~~~Tv~~Lv~~I~~~~ 124 (127)
+..+++.||+. +|.++ .+.|++.++-....+.
T Consensus 19 l~dl~~~l~~~~l~~~~--~~~Tl~G~i~~~lg~i 51 (86)
T 2p4p_A 19 LEDVMRALNIHTFPRDE--NYETIGGFMMYMLRXI 51 (86)
T ss_dssp HHHHHHHTTCCCSCCSC--SSCBHHHHHHHHHCSC
T ss_pred HHHHHHHhCCCCCCcCC--CCccHHHHHHHHhCCC
Confidence 45678889996 87532 5778888876655543
No 73
>3ufe_A Transcriptional antiterminator (BGLG family); extended helix bundle, arcimboldo; 1.50A {Bacillus subtilis} PDB: 3gwh_A
Probab=33.59 E-value=25 Score=22.06 Aligned_cols=21 Identities=14% Similarity=0.267 Sum_probs=17.5
Q ss_pred HHHHHHHHHHHhCCcCCcccc
Q 033119 87 TVEVVMALEEEFGFEIPDNEA 107 (127)
Q Consensus 87 ~veLi~~lEeefgi~I~~~~l 107 (127)
+..+...+++.||+.+|++|.
T Consensus 79 a~~i~~~ie~~~~i~i~~~Ei 99 (111)
T 3ufe_A 79 AWKLIKILQQTLKKPVHEAEA 99 (111)
T ss_dssp HHHHHHHHHHHHCSCCCTHHH
T ss_pred HHHHHHHHHHHHCCCCCHHHH
Confidence 346778889999999999985
No 74
>2opa_A Probable tautomerase YWHB; homohexamer, 4-oxalocrotonate tautomerase, inhibitor, 2-FLUO hydroxycinnamate, isomerase; HET: FHC; 2.40A {Bacillus subtilis} PDB: 2op8_A*
Probab=31.46 E-value=38 Score=18.78 Aligned_cols=24 Identities=21% Similarity=0.361 Sum_probs=19.1
Q ss_pred CHHHHHHHHHHHHHhhhCCCCCcc
Q 033119 47 DKSEVTDRVISVVKNFQKVDPSKV 70 (127)
Q Consensus 47 ~~~~I~~~I~~il~~~l~i~~~~I 70 (127)
.+.++.+.|.+.+.+.+|++++.+
T Consensus 15 qk~~l~~~i~~~l~~~lg~~~~~v 38 (61)
T 2opa_A 15 QKRNLVEKVTEAVKETTGASEEKI 38 (61)
T ss_dssp HHHHHHHHHHHHHHHHHCCCGGGC
T ss_pred HHHHHHHHHHHHHHHHhCcCcCeE
Confidence 456788899999999999887643
No 75
>1otf_A 4-oxalocrotonate tautomerase; isomerase; 1.90A {Pseudomonas SP} SCOP: d.80.1.1 PDB: 4otc_A 4ota_A 4otb_A 1bjp_A 2fm7_A
Probab=31.31 E-value=38 Score=18.79 Aligned_cols=24 Identities=17% Similarity=0.183 Sum_probs=19.0
Q ss_pred CHHHHHHHHHHHHHhhhCCCCCcc
Q 033119 47 DKSEVTDRVISVVKNFQKVDPSKV 70 (127)
Q Consensus 47 ~~~~I~~~I~~il~~~l~i~~~~I 70 (127)
.+.++.+.|.+.+.+.+|++++.+
T Consensus 15 ~k~~l~~~i~~~l~~~lg~p~~~v 38 (62)
T 1otf_A 15 QKETLIRQVSEAMANSLDAPLERV 38 (62)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGC
T ss_pred HHHHHHHHHHHHHHHHhCcCcccE
Confidence 456788899999999999887643
No 76
>2rg8_A Programmed cell death protein 4; MA3 domain, heat repeats, anti-oncogene, apoptosis, cell cycle, cytoplasm, nucleus, phosphorylation, polymorphism; 1.80A {Homo sapiens} PDB: 2kzt_A
Probab=30.57 E-value=38 Score=23.78 Aligned_cols=23 Identities=13% Similarity=0.329 Sum_probs=20.6
Q ss_pred CCCCCHHHHHHHHHHHHHhhhCC
Q 033119 43 GSFLDKSEVTDRVISVVKNFQKV 65 (127)
Q Consensus 43 ~~~M~~~~I~~~I~~il~~~l~i 65 (127)
+++|+++++.+++..+|.+++..
T Consensus 1 ~p~~s~ee~~kk~~~ii~EYf~~ 23 (165)
T 2rg8_A 1 GLPLDERAFEKTLTPIIQEYFEH 23 (165)
T ss_dssp CCCSSHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHcC
Confidence 57899999999999999999754
No 77
>3abf_A 4-oxalocrotonate tautomerase; isomerase; 1.94A {Thermus thermophilus}
Probab=30.54 E-value=37 Score=19.00 Aligned_cols=25 Identities=16% Similarity=0.202 Sum_probs=19.9
Q ss_pred CHHHHHHHHHHHHHhhhCCCCCccc
Q 033119 47 DKSEVTDRVISVVKNFQKVDPSKVT 71 (127)
Q Consensus 47 ~~~~I~~~I~~il~~~l~i~~~~I~ 71 (127)
.+.++.+.|.+.+.+.+|++++.+.
T Consensus 16 qk~~l~~~lt~~l~~~lg~~~~~v~ 40 (64)
T 3abf_A 16 KKRELVRRLTEMASRLLGEPYEEVR 40 (64)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGEE
T ss_pred HHHHHHHHHHHHHHHHhCCCcccEE
Confidence 3567899999999999998876543
No 78
>2x4k_A 4-oxalocrotonate tautomerase; isomerase; 1.10A {Staphylococcus aureus}
Probab=28.17 E-value=47 Score=18.24 Aligned_cols=24 Identities=8% Similarity=0.173 Sum_probs=19.4
Q ss_pred CHHHHHHHHHHHHHhhhCCCCCcc
Q 033119 47 DKSEVTDRVISVVKNFQKVDPSKV 70 (127)
Q Consensus 47 ~~~~I~~~I~~il~~~l~i~~~~I 70 (127)
.+.++.+.|.+.+.+.+|++++.+
T Consensus 18 ~k~~l~~~l~~~l~~~lg~p~~~v 41 (63)
T 2x4k_A 18 QLKNLVSEVTDAVEKTTGANRQAI 41 (63)
T ss_dssp HHHHHHHHHHHHHHHHHCCCGGGC
T ss_pred HHHHHHHHHHHHHHHHhCcCcccE
Confidence 356789999999999999987643
No 79
>3m21_A Probable tautomerase HP_0924; 4-oxalocrotonate tautomerase, catalytic proline, hexamer, BE beta, isomerase; 1.90A {Helicobacter pylori} PDB: 2orm_A
Probab=27.81 E-value=46 Score=19.16 Aligned_cols=24 Identities=8% Similarity=0.238 Sum_probs=19.3
Q ss_pred CHHHHHHHHHHHHHhhhCCCCCcc
Q 033119 47 DKSEVTDRVISVVKNFQKVDPSKV 70 (127)
Q Consensus 47 ~~~~I~~~I~~il~~~l~i~~~~I 70 (127)
.+.++.+.|.+.+.+.+|++++.+
T Consensus 18 qK~~l~~~lt~~l~~~lg~p~~~v 41 (67)
T 3m21_A 18 QKQQLIEGVSDLMVKVLNKNKASI 41 (67)
T ss_dssp HHHHHHHHHHHHHHHHHCCCGGGC
T ss_pred HHHHHHHHHHHHHHHHHCcCcccE
Confidence 456788899999999999887654
No 80
>3ry0_A Putative tautomerase; oxalocrotonate tautomerase family, isomerase; 1.40A {Streptomyces achromogenes}
Probab=26.85 E-value=50 Score=18.85 Aligned_cols=24 Identities=4% Similarity=0.068 Sum_probs=19.3
Q ss_pred CHHHHHHHHHHHHHhhhCCCCCcc
Q 033119 47 DKSEVTDRVISVVKNFQKVDPSKV 70 (127)
Q Consensus 47 ~~~~I~~~I~~il~~~l~i~~~~I 70 (127)
.+.++.+.|.+.+.+.+|++++.+
T Consensus 15 qk~~L~~~it~~~~~~lg~p~~~v 38 (65)
T 3ry0_A 15 EVAALGEALTAAAHETLGTPVEAV 38 (65)
T ss_dssp HHHHHHHHHHHHHHHHHCCCGGGC
T ss_pred HHHHHHHHHHHHHHHHhCcCcccE
Confidence 466788899999999999987654
No 81
>3mb2_A 4-oxalocrotonate tautomerase family enzyme - ALPH; trans-3-chloroacrylic acid dehalogenase, CAAD, dehalogenase, hydrolase; 2.41A {Chloroflexus aurantiacus}
Probab=26.58 E-value=47 Score=19.48 Aligned_cols=24 Identities=17% Similarity=0.177 Sum_probs=19.2
Q ss_pred CHHHHHHHHHHHHHhhhCCCCCcc
Q 033119 47 DKSEVTDRVISVVKNFQKVDPSKV 70 (127)
Q Consensus 47 ~~~~I~~~I~~il~~~l~i~~~~I 70 (127)
.+.++.+.|.+.+.+.+|++++.+
T Consensus 16 qK~~L~~~it~~l~~~lg~p~~~v 39 (72)
T 3mb2_A 16 QKAELARALSAAAAAAFDVPLAEV 39 (72)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGE
T ss_pred HHHHHHHHHHHHHHHHhCCCcccE
Confidence 456788899999999999987654
No 82
>2hfk_A Pikromycin, type I polyketide synthase pikaiv; alpha/beta hydrolase, thioesterase; HET: E4H; 1.79A {Streptomyces venezuelae} PDB: 2h7x_A* 2h7y_A* 2hfj_A* 1mna_A 1mn6_A 1mnq_A
Probab=26.56 E-value=4.4 Score=30.38 Aligned_cols=41 Identities=15% Similarity=0.210 Sum_probs=28.0
Q ss_pred CCHHHHHHHHHHHHHhhhCCCCCccccCCccccccCCChhhHHHHHHHHHHHhC
Q 033119 46 LDKSEVTDRVISVVKNFQKVDPSKVTVNAHFQNDLGLDSLDTVEVVMALEEEFG 99 (127)
Q Consensus 46 M~~~~I~~~I~~il~~~l~i~~~~I~~dt~l~~dLGlDSL~~veLi~~lEeefg 99 (127)
-+++++++.|.++.++++|++. +++|+ +| ++++..|.+.|.
T Consensus 24 ~P~~~~E~~la~iw~~vL~~~~-----~d~Ff-~l-------~~l~~~~~~~f~ 64 (319)
T 2hfk_A 24 ADTGAGAGMFRALFRQAVEDDR-----YGEFL-DV-------LAEASAFRPQFA 64 (319)
T ss_dssp ------CCHHHHHHHHHHHTTC-----HHHHH-HH-------HHHHHTTSCEEC
T ss_pred CCCCchHHHHHHHHHHHHcCCc-----hHHHH-HH-------HHHHHHHHHhcC
Confidence 4677888899999999999864 66777 55 888888877654
No 83
>2pag_A Hypothetical protein; nysgx, target 10412I, novel fold, structural genomics, PSI-2 structure initiative; 1.60A {Pseudomonas syringae PV} SCOP: d.369.1.1
Probab=23.13 E-value=42 Score=22.72 Aligned_cols=18 Identities=22% Similarity=0.335 Sum_probs=15.5
Q ss_pred HHHHHHHHHHhCCcCCcc
Q 033119 88 VEVVMALEEEFGFEIPDN 105 (127)
Q Consensus 88 veLi~~lEeefgi~I~~~ 105 (127)
-+.+..+|+.+|+++|.+
T Consensus 24 ~e~I~~~E~~Lgi~fP~d 41 (135)
T 2pag_A 24 EDQLVEIEEQLFINIPFV 41 (135)
T ss_dssp HHHHHHHHHHHTCCCCHH
T ss_pred HHHHHHHHHHHCCCCCHH
Confidence 466789999999999986
No 84
>3ej9_A Alpha-subunit of trans-3-chloroacrylic acid dehal; trans-3-chloroacrylic acid dehalogenase, CAAD, dehalogenase, isomerase, hydrolase; 1.50A {Pseudomonas pavonaceae} SCOP: d.80.1.1 PDB: 3ej3_A 1s0y_A 3ej7_A
Probab=22.92 E-value=63 Score=19.32 Aligned_cols=24 Identities=8% Similarity=0.210 Sum_probs=19.5
Q ss_pred CHHHHHHHHHHHHHhhhCCCCCcc
Q 033119 47 DKSEVTDRVISVVKNFQKVDPSKV 70 (127)
Q Consensus 47 ~~~~I~~~I~~il~~~l~i~~~~I 70 (127)
.+.++.+.|.+.+.+.+|++++++
T Consensus 16 qK~~L~~~it~~l~~~lg~p~~~v 39 (76)
T 3ej9_A 16 QKRALSAGLLRVISEATGEPRENI 39 (76)
T ss_dssp HHHHHHHHHHHHHHHHHCCCGGGC
T ss_pred HHHHHHHHHHHHHHHHHCcCcccE
Confidence 466888999999999999887654
No 85
>1gyx_A YDCE, B1461, hypothetical protein YDCE; tautomerase, isomerase, complete proteo; HET: EPE; 1.35A {Escherichia coli} SCOP: d.80.1.1 PDB: 1gyj_A* 1gyy_A*
Probab=22.13 E-value=66 Score=19.03 Aligned_cols=24 Identities=13% Similarity=0.252 Sum_probs=19.4
Q ss_pred CHHHHHHHHHHHHHhhhCCCCCcc
Q 033119 47 DKSEVTDRVISVVKNFQKVDPSKV 70 (127)
Q Consensus 47 ~~~~I~~~I~~il~~~l~i~~~~I 70 (127)
.+.++.+.|.+.+.+.+|++++.+
T Consensus 16 qk~~L~~~l~~~l~~~lgip~~~v 39 (76)
T 1gyx_A 16 QKAALAADITDVIIRHLNSKDSSI 39 (76)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGC
T ss_pred HHHHHHHHHHHHHHHHhCcCCceE
Confidence 456788899999999999987654
No 86
>2kxo_A Cell division topological specificity factor; MINE, MIND-binding, to specificity, cell cycle; NMR {Neisseria gonorrhoeae}
Probab=21.47 E-value=70 Score=20.69 Aligned_cols=26 Identities=8% Similarity=0.268 Sum_probs=21.9
Q ss_pred CHHHHHHHHHHHHHhhhCCCCCcccc
Q 033119 47 DKSEVTDRVISVVKNFQKVDPSKVTV 72 (127)
Q Consensus 47 ~~~~I~~~I~~il~~~l~i~~~~I~~ 72 (127)
-.+++.+.|.++++++..++++.+.-
T Consensus 39 ~l~~lk~eIl~VIsKYv~Id~~~v~V 64 (95)
T 2kxo_A 39 YLPTLRKALMEVLSKYVNVSLDNIRI 64 (95)
T ss_dssp SHHHHHHHHHHHHHHHSCCCTTSEEE
T ss_pred HHHHHHHHHHHHHHHheecchhheEE
Confidence 45899999999999999998776553
No 87
>3rio_A PTSGHI operon antiterminator; twisted beta sheet, four helix bundle, transcriptional antitermination, transcription; 1.99A {Bacillus subtilis}
Probab=21.41 E-value=55 Score=22.99 Aligned_cols=21 Identities=29% Similarity=0.531 Sum_probs=17.7
Q ss_pred HHHHHHHHHHHhCCcCCcccc
Q 033119 87 TVEVVMALEEEFGFEIPDNEA 107 (127)
Q Consensus 87 ~veLi~~lEeefgi~I~~~~l 107 (127)
+.+++..|++.|++.+|++|.
T Consensus 147 a~~~~~~Ie~~~~i~lpedEi 167 (180)
T 3rio_A 147 AKEVIDMINEKAGLCLPEGEI 167 (180)
T ss_dssp HHHHHHHHHHHHTSCCCTTHH
T ss_pred HHHHHHHHHHHHCCCCCHHHH
Confidence 346778889999999999985
No 88
>1xmk_A Double-stranded RNA-specific adenosine deaminase; winged helix-turn-helix, RNA editing, interferon, ADAR1, hydrolase; 0.97A {Homo sapiens} SCOP: a.4.5.19
Probab=21.25 E-value=23 Score=22.17 Aligned_cols=48 Identities=19% Similarity=0.398 Sum_probs=35.5
Q ss_pred CCCCHHHHHHHHHHHHHhhhCCCCCccccCCccccccCCChh-hHHHHHHHHHHH
Q 033119 44 SFLDKSEVTDRVISVVKNFQKVDPSKVTVNAHFQNDLGLDSL-DTVEVVMALEEE 97 (127)
Q Consensus 44 ~~M~~~~I~~~I~~il~~~l~i~~~~I~~dt~l~~dLGlDSL-~~veLi~~lEee 97 (127)
.+|+..++.++|..+|...-+.... .+.+.||+... .+=.-+..+|++
T Consensus 5 ~~~~~~~~~~~IL~~Lk~~g~~ta~------eiA~~Lgit~~~aVr~hL~~Le~e 53 (79)
T 1xmk_A 5 ASLDMAEIKEKICDYLFNVSDSSAL------NLAKNIGLTKARDINAVLIDMERQ 53 (79)
T ss_dssp TSHHHHHHHHHHHHHHHHTCCEEHH------HHHHHHCGGGHHHHHHHHHHHHHT
T ss_pred ccccchhHHHHHHHHHHHcCCcCHH------HHHHHcCCCcHHHHHHHHHHHHHC
Confidence 4567778889999888766443322 34478999999 888889999886
No 89
>3lph_A Protein REV; helix-loop-helix, RNA-binding arginine rich motif, protein oligomerization, AIDS, HOST cytoplasm, HOST nucleus; 2.50A {Human immunodeficiency virus type 1}
Probab=20.99 E-value=35 Score=21.25 Aligned_cols=52 Identities=17% Similarity=0.176 Sum_probs=29.7
Q ss_pred HHHhhhhhccccccCCCCCCccccchhh-----hhhhhcccCCCCCHHHHHHHHHHHHHhhhCCC
Q 033119 7 ALLKYLRVNVATVQRNPSPFSLSFNSIR-----RCFAEEVRGSFLDKSEVTDRVISVVKNFQKVD 66 (127)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~M~~~~I~~~I~~il~~~l~i~ 66 (127)
.||+-+|+=.--.|-||+| +|.++..+ .||-+. ..+|...-.-||..++|-+
T Consensus 13 ~Ll~~vRiIkiLyQSNP~P-~p~GTrqaRRNRRRRWR~R-------QrQI~~is~rIl~t~lgr~ 69 (72)
T 3lph_A 13 DSLKAVRLIKFLYQSNPPP-NPEGTRQARRNRRRRWRER-------QRQIHSISERIRSTYLGRS 69 (72)
T ss_dssp HHHHHHHHHHHHHHTCCCC-CCCSCHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHSGGG
T ss_pred HHHHHHHHHHHHHccCCCC-CCCCchHHHHHHHHHHHHH-------HHHHHHHHHHHHHHhcCCC
Confidence 3777776654446767655 45555443 345442 4566665566666666643
No 90
>2o3g_A Putative protein; APC85631.1, neisseria meningitid structural genomics, PSI-2, protein structure initiative; 2.55A {Neisseria meningitidis} SCOP: d.145.1.4
Probab=20.98 E-value=1e+02 Score=18.98 Aligned_cols=32 Identities=6% Similarity=0.037 Sum_probs=21.4
Q ss_pred HHHHHHHhCCc-CCccccccCCcHHHHHHHHHcCC
Q 033119 91 VMALEEEFGFE-IPDNEADKISTINMAVDFIASHP 124 (127)
Q Consensus 91 i~~lEeefgi~-I~~~~l~~~~Tv~~Lv~~I~~~~ 124 (127)
+..+++.||+. +|.+ ..+.|++.++-....+.
T Consensus 27 l~dl~~~l~~~~l~~~--~~~~Tl~G~i~~~lg~i 59 (92)
T 2o3g_A 27 YVELAPQLNLPQQEED--ADFHTVAGLIMEELQTI 59 (92)
T ss_dssp HHHHTTTTTCCCCCTT--CSCSBHHHHHHHHHTSC
T ss_pred HHHHHHHhCCCCCCcC--CCcccHHHHHHHHhCCC
Confidence 45678889998 8732 25678888876555443
Done!