BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>033120
MAAVSDDDDGVKNKELPGIEFKKSRRTKSLTGTSLASIESLSMPLVQEVVLSADIRCSEC
QKRVADMMSKLNETESVLVNVSEKKVTLTSRYPVVVEVSKRQITAVRRNPLQKIAIIKRI
FGSSSR

High Scoring Gene Products

Symbol, full name Information P value
AT1G68585 protein from Arabidopsis thaliana 7.2e-20
AT2G35730 protein from Arabidopsis thaliana 1.1e-05

Back to top

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  033120
        (126 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:505006208 - symbol:AT1G68585 "AT1G68585" speci...   236  7.2e-20   1
TAIR|locus:2058689 - symbol:AT2G35730 species:3702 "Arabi...   102  1.1e-05   1


>TAIR|locus:505006208 [details] [associations]
            symbol:AT1G68585 "AT1G68585" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002684 GenomeReviews:CT485782_GR
            UniGene:At.35504 UniGene:At.71121 EMBL:AY084276 EMBL:BT028878
            EMBL:AK229745 IPI:IPI00524136 RefSeq:NP_564933.1
            ProteinModelPortal:Q8LGG7 SMR:Q8LGG7 EnsemblPlants:AT1G68585.1
            GeneID:843188 KEGG:ath:AT1G68585 TAIR:At1g68585 eggNOG:NOG273381
            HOGENOM:HOG000272697 InParanoid:Q8LGG7 PhylomeDB:Q8LGG7
            ProtClustDB:CLSN2689086 Genevestigator:Q8LGG7 Uniprot:Q8LGG7
        Length = 116

 Score = 236 (88.1 bits), Expect = 7.2e-20, P = 7.2e-20
 Identities = 59/109 (54%), Positives = 77/109 (70%)

Query:    20 EFKKSRRTK-SLTG-TSLASIESLSMPLVQEVVLSADIRCSECQKRVADMMSKLNETESV 77
             E + S R+K S T  TSLAS+ SLSMPL+QE+VLSADIRCS+CQ++VAD+M+++ ET S+
Sbjct:    11 ELEPSLRSKLSRTSETSLASVASLSMPLIQEIVLSADIRCSDCQEKVADIMARMIETYSI 70

Query:    78 LVNVSEKKVTLTSRYPVVVEVSKRQITAVRRNPLQKIAIIKRIFGSSSR 126
             LV+V EKKVTLT  Y     VSK    A+    L KI+ IKR+   S +
Sbjct:    71 LVSVLEKKVTLTCTYSGDRRVSKSYGEAL----LCKISTIKRLICPSRK 115


>TAIR|locus:2058689 [details] [associations]
            symbol:AT2G35730 species:3702 "Arabidopsis thaliana"
            [GO:0005739 "mitochondrion" evidence=ISM] [GO:0030001 "metal ion
            transport" evidence=IEA] [GO:0046872 "metal ion binding"
            evidence=IEA;ISS] [GO:0009407 "toxin catabolic process"
            evidence=RCA] [GO:0010583 "response to cyclopentenone"
            evidence=RCA] InterPro:IPR006121 InterPro:IPR017969 Pfam:PF00403
            PROSITE:PS01047 EMBL:CP002685 GenomeReviews:CT485783_GR
            GO:GO:0046872 EMBL:AC006068 GO:GO:0030001 EMBL:AY088321
            EMBL:BT028885 IPI:IPI00530501 PIR:C84772 RefSeq:NP_565819.1
            UniGene:At.37635 ProteinModelPortal:Q9ZQP5 SMR:Q9ZQP5
            EnsemblPlants:AT2G35730.1 GeneID:818143 KEGG:ath:AT2G35730
            TAIR:At2g35730 eggNOG:NOG296091 HOGENOM:HOG000154038
            InParanoid:Q9ZQP5 OMA:INADVGC PhylomeDB:Q9ZQP5
            ProtClustDB:CLSN2688714 ArrayExpress:Q9ZQP5 Genevestigator:Q9ZQP5
            Uniprot:Q9ZQP5
        Length = 115

 Score = 102 (41.0 bits), Expect = 1.1e-05, P = 1.1e-05
 Identities = 26/81 (32%), Positives = 46/81 (56%)

Query:    34 SLASIESLSMPLVQEVVLSADIRCSECQKRVADMMSKLNETESVLVNVSEKKVTLTSRY- 92
             +L   E LS+P  Q + ++AD+ C  CQ RV+ ++SK+   E  +V++ +K V     + 
Sbjct:    10 TLMLCEKLSLPSFQVIEINADVGCVACQDRVSKIVSKMTGIEEYVVDLKKKLVMARGDFR 69

Query:    93 PVVVEVSKRQIT-AVRRNPLQ 112
             P +V  S++Q+   V + P Q
Sbjct:    70 PRLVS-SQQQVKDVVSQTPSQ 89


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.313   0.127   0.326    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      126       126   0.00091  102 3  10 23  0.40    31
                                                     29  0.40    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  541 (58 KB)
  Total size of DFA:  131 KB (2084 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  19.22u 0.15s 19.37t   Elapsed:  00:00:01
  Total cpu time:  19.22u 0.15s 19.37t   Elapsed:  00:00:01
  Start:  Fri May 10 15:06:57 2013   End:  Fri May 10 15:06:58 2013

Back to top