Query 033120
Match_columns 126
No_of_seqs 121 out of 278
Neff 3.6
Searched_HMMs 29240
Date Mon Mar 25 16:28:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033120.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/033120hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3iwl_A Copper transport protei 99.4 8.7E-13 3E-17 82.5 7.4 47 47-94 2-48 (68)
2 1cc8_A Protein (metallochapero 99.3 4.6E-12 1.6E-16 79.3 8.3 48 45-92 3-51 (73)
3 4a4j_A Pacszia, cation-transpo 99.3 2.8E-11 9.7E-16 74.2 8.2 45 47-91 2-47 (69)
4 3dxs_X Copper-transporting ATP 99.2 5.7E-11 2E-15 74.0 7.9 46 47-92 2-48 (74)
5 2crl_A Copper chaperone for su 99.2 8.7E-11 3E-15 79.5 8.5 47 46-92 18-64 (98)
6 2xmw_A PACS-N, cation-transpor 99.1 3.4E-10 1.1E-14 67.7 7.9 45 47-91 3-48 (71)
7 3fry_A Probable copper-exporti 99.1 1.6E-10 5.3E-15 72.8 5.9 44 47-91 5-49 (73)
8 2xmm_A SSR2857 protein, ATX1; 99.0 4.9E-10 1.7E-14 65.8 6.1 42 50-91 4-46 (64)
9 1yg0_A COP associated protein; 99.0 5.3E-10 1.8E-14 66.0 6.2 40 53-92 8-47 (66)
10 2kt2_A Mercuric reductase; nme 99.0 1.1E-09 3.7E-14 65.8 6.4 40 53-92 7-46 (69)
11 3cjk_B Copper-transporting ATP 99.0 2.6E-09 8.8E-14 65.3 8.2 40 53-92 9-48 (75)
12 1osd_A MERP, hypothetical prot 99.0 1.7E-09 5.9E-14 64.9 7.1 45 48-92 4-49 (72)
13 1aw0_A Menkes copper-transport 99.0 2.8E-09 9.4E-14 64.0 7.4 45 48-92 4-49 (72)
14 2l3m_A Copper-ION-binding prot 99.0 6.8E-09 2.3E-13 62.3 9.1 45 48-92 6-51 (71)
15 2kyz_A Heavy metal binding pro 99.0 1.6E-09 5.4E-14 65.8 5.9 41 50-91 4-45 (67)
16 1mwy_A ZNTA; open-faced beta-s 98.9 4.6E-09 1.6E-13 64.2 8.1 41 52-92 9-49 (73)
17 2aj0_A Probable cadmium-transp 98.9 2.5E-09 8.4E-14 65.4 5.8 44 49-92 5-49 (71)
18 2roe_A Heavy metal binding pro 98.9 2E-09 6.7E-14 65.0 5.3 37 53-89 7-43 (66)
19 1kvi_A Copper-transporting ATP 98.9 2.4E-09 8.2E-14 66.2 5.7 46 47-92 8-54 (79)
20 1q8l_A Copper-transporting ATP 98.9 2.8E-09 9.6E-14 67.8 6.2 46 47-92 9-55 (84)
21 2ldi_A Zinc-transporting ATPas 98.9 5.8E-09 2E-13 61.6 7.0 41 52-92 9-49 (71)
22 1cpz_A Protein (COPZ); copper 98.9 3E-09 1E-13 63.0 5.1 40 53-92 7-46 (68)
23 2qif_A Copper chaperone COPZ; 98.9 1.1E-08 3.8E-13 59.6 7.4 41 52-92 8-48 (69)
24 1fvq_A Copper-transporting ATP 98.9 8.5E-09 2.9E-13 61.8 6.9 39 53-91 9-47 (72)
25 1y3j_A Copper-transporting ATP 98.9 3.4E-09 1.2E-13 65.4 5.2 45 48-92 4-49 (77)
26 2k2p_A Uncharacterized protein 98.9 4.1E-09 1.4E-13 69.4 5.6 46 47-92 22-68 (85)
27 2ew9_A Copper-transporting ATP 98.8 8.2E-09 2.8E-13 70.4 7.3 46 47-92 80-126 (149)
28 2g9o_A Copper-transporting ATP 98.8 1.1E-08 3.8E-13 66.9 7.5 41 52-92 9-49 (90)
29 1opz_A Potential copper-transp 98.8 1.2E-08 4E-13 61.4 6.8 46 47-92 6-52 (76)
30 1yjr_A Copper-transporting ATP 98.8 1.2E-08 4E-13 61.7 6.8 41 52-92 10-50 (75)
31 1p6t_A Potential copper-transp 98.8 1.2E-08 4.1E-13 70.2 5.8 45 47-91 74-119 (151)
32 1qup_A Superoxide dismutase 1 98.8 2.1E-08 7.1E-13 78.3 7.6 58 47-106 6-63 (222)
33 2kkh_A Putative heavy metal tr 98.7 8.6E-08 2.9E-12 62.5 7.8 44 49-92 18-62 (95)
34 1jww_A Potential copper-transp 98.7 3.5E-08 1.2E-12 60.4 5.4 41 52-92 9-49 (80)
35 2ofg_X Zinc-transporting ATPas 98.7 9.1E-08 3.1E-12 65.2 7.7 45 48-92 9-54 (111)
36 2ew9_A Copper-transporting ATP 98.7 5.7E-08 2E-12 66.2 6.5 46 47-92 4-50 (149)
37 2rop_A Copper-transporting ATP 98.6 9.1E-08 3.1E-12 70.2 7.4 46 47-92 122-168 (202)
38 1jk9_B CCS, copper chaperone f 98.6 1.1E-07 3.6E-12 75.8 7.4 58 47-106 7-64 (249)
39 2rop_A Copper-transporting ATP 98.5 2.2E-07 7.4E-12 68.2 6.9 46 47-92 20-66 (202)
40 1p6t_A Potential copper-transp 98.2 3.3E-06 1.1E-10 57.8 6.6 41 52-92 12-52 (151)
41 3j09_A COPA, copper-exporting 98.1 3.7E-06 1.3E-10 74.4 6.8 41 52-92 8-48 (723)
42 2jsx_A Protein NAPD; TAT, proo 84.9 3.1 0.00011 28.5 6.4 46 61-107 19-64 (95)
43 3cq1_A Putative uncharacterize 83.3 1.8 6E-05 29.2 4.5 34 48-81 42-81 (103)
44 3lno_A Putative uncharacterize 82.4 1.3 4.3E-05 30.4 3.5 35 48-82 45-86 (108)
45 1uwd_A Hypothetical protein TM 79.2 2.9 9.9E-05 28.1 4.4 34 48-81 43-82 (103)
46 1t1v_A SH3BGRL3, SH3 domain-bi 55.6 16 0.00054 23.1 3.9 35 48-83 3-42 (93)
47 2ct6_A SH3 domain-binding glut 54.6 19 0.00066 23.9 4.4 35 48-83 9-48 (111)
48 3ic4_A Glutaredoxin (GRX-1); s 51.7 10 0.00035 23.4 2.5 37 44-82 9-45 (92)
49 3ctg_A Glutaredoxin-2; reduced 47.2 31 0.0011 23.5 4.7 33 48-81 38-73 (129)
50 1aba_A Glutaredoxin; electron 46.9 40 0.0014 20.7 4.8 25 56-82 13-37 (87)
51 1h75_A Glutaredoxin-like prote 46.3 35 0.0012 20.1 4.3 33 49-83 3-35 (81)
52 1wik_A Thioredoxin-like protei 46.0 33 0.0011 22.3 4.4 27 55-83 28-54 (109)
53 3c1r_A Glutaredoxin-1; oxidize 45.6 36 0.0012 22.6 4.7 33 49-82 27-62 (118)
54 1r7h_A NRDH-redoxin; thioredox 45.5 39 0.0013 19.4 4.3 33 49-83 3-35 (75)
55 2nyt_A Probable C->U-editing e 45.2 12 0.00042 28.5 2.5 32 48-79 84-116 (190)
56 4e6k_G BFD, bacterioferritin-a 43.3 5.6 0.00019 26.2 0.2 20 51-70 32-51 (73)
57 2yan_A Glutaredoxin-3; oxidore 40.6 29 0.00099 22.3 3.4 27 55-83 30-56 (105)
58 2khp_A Glutaredoxin; thioredox 39.6 48 0.0016 20.1 4.3 33 48-82 7-39 (92)
59 1fov_A Glutaredoxin 3, GRX3; a 37.9 47 0.0016 19.5 3.9 32 49-82 3-34 (82)
60 3rhb_A ATGRXC5, glutaredoxin-C 37.7 41 0.0014 21.6 3.9 32 49-82 21-52 (113)
61 1kte_A Thioltransferase; redox 36.8 62 0.0021 20.0 4.5 25 49-75 14-38 (105)
62 3q9p_A Heat shock protein beta 35.8 36 0.0012 21.9 3.3 24 70-93 14-39 (85)
63 3h8q_A Thioredoxin reductase 3 35.2 53 0.0018 21.5 4.2 33 48-82 18-50 (114)
64 2kgs_A Uncharacterized protein 34.0 16 0.00056 25.8 1.5 31 65-95 67-97 (132)
65 1gh8_A Translation elongation 33.8 27 0.00093 23.8 2.6 22 59-80 62-83 (89)
66 4dvc_A Thiol:disulfide interch 33.6 25 0.00086 23.7 2.4 25 48-72 24-51 (184)
67 2yy3_A Elongation factor 1-bet 33.2 26 0.0009 24.0 2.4 20 61-80 67-86 (91)
68 1ego_A Glutaredoxin; electron 32.1 49 0.0017 19.5 3.3 34 49-83 3-40 (85)
69 2kgs_A Uncharacterized protein 32.1 50 0.0017 23.2 3.8 21 75-95 8-28 (132)
70 1u6t_A SH3 domain-binding glut 31.6 67 0.0023 22.7 4.4 34 49-83 2-40 (121)
71 3gn3_A Putative protein-disulf 31.4 27 0.00094 25.2 2.4 23 48-70 17-42 (182)
72 2wj5_A Heat shock protein beta 31.0 34 0.0012 22.7 2.6 24 70-93 18-43 (101)
73 2hze_A Glutaredoxin-1; thiored 31.0 87 0.003 20.2 4.7 26 48-75 20-45 (114)
74 3qmx_A Glutaredoxin A, glutare 30.4 64 0.0022 20.9 3.9 34 48-83 17-50 (99)
75 2y1y_A Alpha-crystallin B chai 30.2 37 0.0013 21.9 2.6 23 70-92 13-37 (90)
76 2lqo_A Putative glutaredoxin R 29.8 64 0.0022 21.1 3.8 33 49-83 6-38 (92)
77 2cpq_A FragIle X mental retard 28.3 83 0.0029 21.4 4.3 29 62-91 35-63 (91)
78 3bpd_A Uncharacterized protein 26.3 36 0.0012 24.2 2.2 30 62-91 22-58 (100)
79 3zyw_A Glutaredoxin-3; metal b 26.3 88 0.003 20.7 4.1 27 55-83 29-55 (111)
80 2wem_A Glutaredoxin-related pr 25.3 1E+02 0.0035 20.9 4.4 25 56-82 34-59 (118)
81 2klx_A Glutaredoxin; thioredox 24.9 66 0.0023 19.5 3.0 33 48-82 7-39 (89)
82 1wjk_A C330018D20RIK protein; 24.4 1.4E+02 0.0048 18.9 5.9 33 49-82 19-52 (100)
83 2wci_A Glutaredoxin-4; redox-a 24.3 1E+02 0.0035 21.5 4.3 27 55-83 48-74 (135)
84 3msz_A Glutaredoxin 1; alpha-b 24.1 1.2E+02 0.004 17.8 4.1 25 49-75 6-30 (89)
85 2x3d_A SSO6206; unknown functi 24.1 42 0.0015 23.7 2.2 29 63-91 22-57 (96)
86 3gnj_A Thioredoxin domain prot 23.5 1.3E+02 0.0044 18.1 5.4 37 48-84 25-65 (111)
87 3gla_A Low molecular weight he 23.4 44 0.0015 21.6 2.0 24 71-94 22-47 (100)
88 2joi_A Hypothetical protein TA 23.1 43 0.0015 24.5 2.1 55 45-103 22-91 (118)
89 3aab_A Putative uncharacterize 22.9 44 0.0015 22.6 2.1 25 70-94 41-68 (123)
90 3ipz_A Monothiol glutaredoxin- 22.8 1.1E+02 0.0039 19.8 4.1 25 56-82 32-56 (109)
91 4fei_A Heat shock protein-rela 22.5 46 0.0016 21.9 2.1 23 70-92 23-47 (102)
92 2raq_A Conserved protein MTH88 22.5 43 0.0015 23.7 1.9 29 63-91 23-58 (97)
93 3l1e_A Alpha-crystallin A chai 22.2 61 0.0021 21.6 2.6 22 71-92 20-43 (106)
94 1f60_B Elongation factor EEF1B 22.1 63 0.0022 22.2 2.7 22 59-80 67-89 (94)
95 1qys_A TOP7; alpha-beta, novel 22.0 1.7E+02 0.0057 20.5 4.9 33 61-94 64-96 (106)
96 2cq9_A GLRX2 protein, glutared 21.5 90 0.0031 20.9 3.4 33 48-82 28-60 (130)
97 3qfa_C Thioredoxin; protein-pr 21.2 1.6E+02 0.0055 18.5 5.5 33 52-84 38-73 (116)
98 1b64_A Elongation factor 1-bet 21.2 66 0.0023 21.9 2.7 23 59-81 64-87 (91)
99 1z3e_A Regulatory protein SPX; 21.0 1.6E+02 0.0055 19.9 4.7 34 49-84 3-36 (132)
100 3gha_A Disulfide bond formatio 20.9 56 0.0019 23.7 2.4 18 47-64 31-48 (202)
101 2e0q_A Thioredoxin; electron t 20.7 1.4E+02 0.0047 17.4 5.4 37 48-84 19-58 (104)
102 2ko1_A CTR148A, GTP pyrophosph 20.2 1.5E+02 0.0052 17.7 4.7 33 47-79 45-77 (88)
No 1
>3iwl_A Copper transport protein ATOX1; beta-alpha-beta-BETA-alpha-beta, cisplatin, platinum, chaperone, ION transport, metal-binding, metal transport; HET: TCE; 1.60A {Homo sapiens} SCOP: d.58.17.1 PDB: 1fe4_A* 1fee_A* 1tl4_A 1tl5_A 2k1r_B 1fe0_A* 3iwx_A 3cjk_A
Probab=99.40 E-value=8.7e-13 Score=82.54 Aligned_cols=47 Identities=23% Similarity=0.465 Sum_probs=42.8
Q ss_pred eEEEEEecccChhHHHHHHHHHhcCCCceEEEEeccCCEEEEEeecCc
Q 033120 47 QEVVLSADIRCSECQKRVADMMSKLNETESVLVNVSEKKVTLTSRYPV 94 (126)
Q Consensus 47 Q~VvLkvgMsC~hC~krVkkaLskL~GVesV~VDLe~KkVtVtg~~~~ 94 (126)
++++|.+||+|.||+.+|+++|.+++|| ++.||+..++++|+++.+.
T Consensus 2 ~~~~~~vgm~C~~C~~~i~~~l~~~~gV-~v~v~~~~~~~~v~~~~~~ 48 (68)
T 3iwl_A 2 PKHEFSVDMTCGGCAEAVSRVLNKLGGV-KYDIDLPNKKVCIESEHSM 48 (68)
T ss_dssp CEEEEEECCCSHHHHHHHHHHHHHHCSE-EEEEETTTTEEEEEESSCH
T ss_pred ceEEEEECcCcHHHHHHHHHHHHcCCCe-EEEEEcCCCEEEEEecCCH
Confidence 4677888999999999999999999999 9999999999999986543
No 2
>1cc8_A Protein (metallochaperone ATX1); copper transport, mercury coordination, metal transport; 1.02A {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1cc7_A 1fd8_A 1fes_A 2ggp_A 3k7r_A
Probab=99.35 E-value=4.6e-12 Score=79.26 Aligned_cols=48 Identities=15% Similarity=0.389 Sum_probs=44.1
Q ss_pred eeeEEEEEecccChhHHHHHHHHHhcCC-CceEEEEeccCCEEEEEeec
Q 033120 45 LVQEVVLSADIRCSECQKRVADMMSKLN-ETESVLVNVSEKKVTLTSRY 92 (126)
Q Consensus 45 ~~Q~VvLkvgMsC~hC~krVkkaLskL~-GVesV~VDLe~KkVtVtg~~ 92 (126)
+.+++.|.++|+|++|+.+|+++|++++ ||.++.||+..++++|++..
T Consensus 3 ~m~~~~~~v~m~C~~C~~~ie~~l~~~~~GV~~~~v~~~~~~~~v~~~~ 51 (73)
T 1cc8_A 3 EIKHYQFNVVMTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTTL 51 (73)
T ss_dssp CCEEEEEEECCCSHHHHHHHHHHHHTTTTSEEEEEEETTTTEEEEEESS
T ss_pred CceEEEEEEeeECHHHHHHHHHHHHhCCCCceEEEEECCCCEEEEEEeC
Confidence 3567788888999999999999999999 99999999999999999853
No 3
>4a4j_A Pacszia, cation-transporting ATPase PACS; hydrolase, copper homeostasis, zinc homeostasis, ATX1, metal-transporting atpases; 1.25A {Synechocystis} PDB: 4a48_A 2gcf_A 2xmw_A
Probab=99.26 E-value=2.8e-11 Score=74.24 Aligned_cols=45 Identities=18% Similarity=0.408 Sum_probs=41.0
Q ss_pred eEEEEEe-cccChhHHHHHHHHHhcCCCceEEEEeccCCEEEEEee
Q 033120 47 QEVVLSA-DIRCSECQKRVADMMSKLNETESVLVNVSEKKVTLTSR 91 (126)
Q Consensus 47 Q~VvLkv-gMsC~hC~krVkkaLskL~GVesV~VDLe~KkVtVtg~ 91 (126)
|++.|.+ ||+|.+|+.+|+++|.+++||.++.||+..++++|+++
T Consensus 2 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~ 47 (69)
T 4a4j_A 2 QTINLQLEGMDCTSCASSIERAIAKVPGVQSCQVNFALEQAVVSYH 47 (69)
T ss_dssp EEEEEEEESCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEC
T ss_pred CEEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEEC
Confidence 5566665 79999999999999999999999999999999999974
No 4
>3dxs_X Copper-transporting ATPase RAN1; CXXC motif, ferredoxin-like fold, ATP- binding, ethylene signaling pathway, hydrolase, ION transport; 1.70A {Arabidopsis thaliana} SCOP: d.58.17.0
Probab=99.22 E-value=5.7e-11 Score=73.95 Aligned_cols=46 Identities=11% Similarity=0.300 Sum_probs=41.2
Q ss_pred eEEEEEe-cccChhHHHHHHHHHhcCCCceEEEEeccCCEEEEEeec
Q 033120 47 QEVVLSA-DIRCSECQKRVADMMSKLNETESVLVNVSEKKVTLTSRY 92 (126)
Q Consensus 47 Q~VvLkv-gMsC~hC~krVkkaLskL~GVesV~VDLe~KkVtVtg~~ 92 (126)
+++.|.+ ||+|.+|+.+|+++|.+++||.++.||+..++++|+++.
T Consensus 2 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~ 48 (74)
T 3dxs_X 2 RKIQVGVTGMTCAACSNSVEAALMNVNGVFKASVALLQNRADVVFDP 48 (74)
T ss_dssp EEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECT
T ss_pred cEEEEEECCcCCHHHHHHHHHHHhcCCCEEEEEEEecCCEEEEEECC
Confidence 3455554 899999999999999999999999999999999999874
No 5
>2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.19 E-value=8.7e-11 Score=79.54 Aligned_cols=47 Identities=13% Similarity=0.349 Sum_probs=43.1
Q ss_pred eeEEEEEecccChhHHHHHHHHHhcCCCceEEEEeccCCEEEEEeec
Q 033120 46 VQEVVLSADIRCSECQKRVADMMSKLNETESVLVNVSEKKVTLTSRY 92 (126)
Q Consensus 46 ~Q~VvLkvgMsC~hC~krVkkaLskL~GVesV~VDLe~KkVtVtg~~ 92 (126)
.+.++|++.|+|.+|+.+|+++|.+++||.++.||+..++++|+++.
T Consensus 18 ~~~~~l~V~m~C~~C~~~Ie~aL~~l~GV~~v~vdl~~~~~~V~~~~ 64 (98)
T 2crl_A 18 LCTLEFAVQMTCQSCVDAVRKSLQGVAGVQDVEVHLEDQMVLVHTTL 64 (98)
T ss_dssp CEEEEEEECCCSHHHHHHHHHTTTTCTTCCEEEEETTTTEEEEEESS
T ss_pred ceEEEEEEeeECHHHHHHHHHHHHcCCCceEEEEECCCCEEEEEEeC
Confidence 45677888899999999999999999999999999999999999863
No 6
>2xmw_A PACS-N, cation-transporting ATPase PACS; hydrolase, Cu(I)-binding, trafficking; 1.80A {Synechocystis SP} PDB: 2gcf_A
Probab=99.12 E-value=3.4e-10 Score=67.71 Aligned_cols=45 Identities=20% Similarity=0.449 Sum_probs=40.2
Q ss_pred eEEEEE-ecccChhHHHHHHHHHhcCCCceEEEEeccCCEEEEEee
Q 033120 47 QEVVLS-ADIRCSECQKRVADMMSKLNETESVLVNVSEKKVTLTSR 91 (126)
Q Consensus 47 Q~VvLk-vgMsC~hC~krVkkaLskL~GVesV~VDLe~KkVtVtg~ 91 (126)
+.+.|. .||+|.+|+.+|+++|.+++||.++.+|+..++++|+++
T Consensus 3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~ 48 (71)
T 2xmw_A 3 QTINLQLEGMRCAACASSIERAIAKVPGVQSCQVNFALEQAVVSYH 48 (71)
T ss_dssp EEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEC
T ss_pred cEEEEEECCcccHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEEC
Confidence 344444 469999999999999999999999999999999999987
No 7
>3fry_A Probable copper-exporting P-type ATPase A; transport protein, metal binding domain, domain SWAP, ATP-BI cell membrane, copper transport; HET: CIT; 2.00A {Archaeoglobus fulgidus}
Probab=99.10 E-value=1.6e-10 Score=72.83 Aligned_cols=44 Identities=20% Similarity=0.412 Sum_probs=40.2
Q ss_pred eEEEEEe-cccChhHHHHHHHHHhcCCCceEEEEeccCCEEEEEee
Q 033120 47 QEVVLSA-DIRCSECQKRVADMMSKLNETESVLVNVSEKKVTLTSR 91 (126)
Q Consensus 47 Q~VvLkv-gMsC~hC~krVkkaLskL~GVesV~VDLe~KkVtVtg~ 91 (126)
+++.|.+ ||+|.+|+.+|+++|.+ +||.++.||+..++++|+++
T Consensus 5 ~~~~~~v~gm~C~~C~~~ie~~l~~-~gv~~~~v~~~~~~~~v~~~ 49 (73)
T 3fry_A 5 EKIVLELSGLSCHHCVARVKKALEE-AGAKVEKVDLNEAVVAGNKE 49 (73)
T ss_dssp EEEEEEEESSBCGGGHHHHHHHHHH-TTCEEEEECSSEEEEEEEGG
T ss_pred EEEEEEECCCCCHHHHHHHHHHhcc-CCcEEEEEEccCCEEEEEEC
Confidence 4556655 79999999999999999 99999999999999999987
No 8
>2xmm_A SSR2857 protein, ATX1; metal transport, copper homeostasis, chaperone, P-type atpas; 1.65A {Synechocystis SP} PDB: 2xmv_A 1sb6_A 2xmj_A 2xmk_A 2xmt_A 2xmu_A
Probab=99.05 E-value=4.9e-10 Score=65.78 Aligned_cols=42 Identities=31% Similarity=0.544 Sum_probs=38.6
Q ss_pred EEEe-cccChhHHHHHHHHHhcCCCceEEEEeccCCEEEEEee
Q 033120 50 VLSA-DIRCSECQKRVADMMSKLNETESVLVNVSEKKVTLTSR 91 (126)
Q Consensus 50 vLkv-gMsC~hC~krVkkaLskL~GVesV~VDLe~KkVtVtg~ 91 (126)
.|.+ ||+|.+|+.+|+++|.+++||.++.||+..++++|++.
T Consensus 4 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~ 46 (64)
T 2xmm_A 4 QLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSA 46 (64)
T ss_dssp EEECTTCCSHHHHHHHHHHHHHHCTTCEEEECTTTCEEEEECS
T ss_pred EEEECCcCcHHHHHHHHHHHhcCCCcEEEEEEecCCEEEEEec
Confidence 3554 89999999999999999999999999999999999964
No 9
>1yg0_A COP associated protein; open-faced beta-sandwich, missing C-terminal beta-sheet, Met transport; NMR {Helicobacter pylori}
Probab=99.04 E-value=5.3e-10 Score=65.98 Aligned_cols=40 Identities=18% Similarity=0.423 Sum_probs=38.0
Q ss_pred ecccChhHHHHHHHHHhcCCCceEEEEeccCCEEEEEeec
Q 033120 53 ADIRCSECQKRVADMMSKLNETESVLVNVSEKKVTLTSRY 92 (126)
Q Consensus 53 vgMsC~hC~krVkkaLskL~GVesV~VDLe~KkVtVtg~~ 92 (126)
.||+|.+|+.+|+++|.+++||.++.+|+..++++|+++.
T Consensus 8 ~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~ 47 (66)
T 1yg0_A 8 PSITCNHCVDKIEKFVGEIEGVSFIDVSVEKKSVVVEFDA 47 (66)
T ss_dssp TTCSCSHHHHHHHHHHTTSSSEEEEEEETTTTEEEEEECT
T ss_pred CCcccHHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEECC
Confidence 4799999999999999999999999999999999999874
No 10
>2kt2_A Mercuric reductase; nmera, MERA, HMA domain, mercuric resist metal-binding, oxidoreductase; NMR {Pseudomonas aeruginosa} PDB: 2kt3_A
Probab=99.00 E-value=1.1e-09 Score=65.80 Aligned_cols=40 Identities=20% Similarity=0.398 Sum_probs=38.4
Q ss_pred ecccChhHHHHHHHHHhcCCCceEEEEeccCCEEEEEeec
Q 033120 53 ADIRCSECQKRVADMMSKLNETESVLVNVSEKKVTLTSRY 92 (126)
Q Consensus 53 vgMsC~hC~krVkkaLskL~GVesV~VDLe~KkVtVtg~~ 92 (126)
.||+|.+|+.+|+++|.+++||.++.||+..++++|+++.
T Consensus 7 ~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~ 46 (69)
T 2kt2_A 7 TGMTCDSCAAHVKEALEKVPGVQSALVSYPKGTAQLAIVP 46 (69)
T ss_dssp ESSCSTHHHHHHHHHHHHSTTEEEEEEETTTTEEEEEECT
T ss_pred CCcccHHHHHHHHHHHHcCCCeeEEEEEccCCEEEEEECC
Confidence 6999999999999999999999999999999999999874
No 11
>3cjk_B Copper-transporting ATPase 1; HAH1, ATP7B, menkes disease, metal homeostasis, chaperone, ION transport, metal- binding, alternative splicing; 1.80A {Homo sapiens} PDB: 2k1r_A
Probab=98.99 E-value=2.6e-09 Score=65.26 Aligned_cols=40 Identities=20% Similarity=0.416 Sum_probs=38.3
Q ss_pred ecccChhHHHHHHHHHhcCCCceEEEEeccCCEEEEEeec
Q 033120 53 ADIRCSECQKRVADMMSKLNETESVLVNVSEKKVTLTSRY 92 (126)
Q Consensus 53 vgMsC~hC~krVkkaLskL~GVesV~VDLe~KkVtVtg~~ 92 (126)
.||+|.+|+.+|+++|.+++||.++.+|+..++++|+++.
T Consensus 9 ~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~ 48 (75)
T 3cjk_B 9 EGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDP 48 (75)
T ss_dssp CCCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECT
T ss_pred CCccCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECC
Confidence 5899999999999999999999999999999999999873
No 12
>1osd_A MERP, hypothetical protein MERP; mercury resistance, metal binding protein, perisplasm, structural genomics; 2.00A {Cupriavidus metallidurans} SCOP: d.58.17.1 PDB: 1afi_A 1afj_A 2hqi_A
Probab=98.99 E-value=1.7e-09 Score=64.92 Aligned_cols=45 Identities=27% Similarity=0.401 Sum_probs=40.4
Q ss_pred EEEEE-ecccChhHHHHHHHHHhcCCCceEEEEeccCCEEEEEeec
Q 033120 48 EVVLS-ADIRCSECQKRVADMMSKLNETESVLVNVSEKKVTLTSRY 92 (126)
Q Consensus 48 ~VvLk-vgMsC~hC~krVkkaLskL~GVesV~VDLe~KkVtVtg~~ 92 (126)
.+.|. .||+|.+|+.+|+++|.+++||.++.||+..++++|+++.
T Consensus 4 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~ 49 (72)
T 1osd_A 4 TVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDD 49 (72)
T ss_dssp EEEEECTTCCSTTHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEET
T ss_pred EEEEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECC
Confidence 34455 4799999999999999999999999999999999999883
No 13
>1aw0_A Menkes copper-transporting ATPase; copper-binding domain, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 2aw0_A
Probab=98.97 E-value=2.8e-09 Score=64.03 Aligned_cols=45 Identities=20% Similarity=0.401 Sum_probs=40.5
Q ss_pred EEEEEe-cccChhHHHHHHHHHhcCCCceEEEEeccCCEEEEEeec
Q 033120 48 EVVLSA-DIRCSECQKRVADMMSKLNETESVLVNVSEKKVTLTSRY 92 (126)
Q Consensus 48 ~VvLkv-gMsC~hC~krVkkaLskL~GVesV~VDLe~KkVtVtg~~ 92 (126)
.+.|.+ ||+|.+|+.+|+++|.+++||.++.+|+..++++|+++.
T Consensus 4 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~ 49 (72)
T 1aw0_A 4 ETVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDP 49 (72)
T ss_dssp EEEEEEECCCHHHHHHHHHHHHHTSTTCCCEEEETTTTEEEEEECT
T ss_pred EEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECC
Confidence 344554 899999999999999999999999999999999999873
No 14
>2l3m_A Copper-ION-binding protein; structural genomics, center for structural genomics of infec diseases, csgid, metal binding protein; NMR {Bacillus anthracis}
Probab=98.96 E-value=6.8e-09 Score=62.33 Aligned_cols=45 Identities=24% Similarity=0.468 Sum_probs=40.3
Q ss_pred EEEEE-ecccChhHHHHHHHHHhcCCCceEEEEeccCCEEEEEeec
Q 033120 48 EVVLS-ADIRCSECQKRVADMMSKLNETESVLVNVSEKKVTLTSRY 92 (126)
Q Consensus 48 ~VvLk-vgMsC~hC~krVkkaLskL~GVesV~VDLe~KkVtVtg~~ 92 (126)
.+.|. .||+|.+|+.+|+++|.+++||.++.||+..++++|+++.
T Consensus 6 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~ 51 (71)
T 2l3m_A 6 QLTLQVEGMSCGHCVNAIESSVKELNGVEQVKVQLAEGTVEVTIDS 51 (71)
T ss_dssp EEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEET
T ss_pred EEEEEECCccCHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECC
Confidence 34444 4899999999999999999999999999999999999873
No 15
>2kyz_A Heavy metal binding protein; structural genomics, PSI-biology, protein structure initiative, joint for structural genomics, JCSG; NMR {Thermotoga maritima}
Probab=98.95 E-value=1.6e-09 Score=65.77 Aligned_cols=41 Identities=34% Similarity=0.632 Sum_probs=38.0
Q ss_pred EEEe-cccChhHHHHHHHHHhcCCCceEEEEeccCCEEEEEee
Q 033120 50 VLSA-DIRCSECQKRVADMMSKLNETESVLVNVSEKKVTLTSR 91 (126)
Q Consensus 50 vLkv-gMsC~hC~krVkkaLskL~GVesV~VDLe~KkVtVtg~ 91 (126)
.|.+ ||+|.+|+.+|+++|+++ ||.++.||+..++++|+++
T Consensus 4 ~~~v~gm~C~~C~~~i~~~l~~~-gv~~~~v~~~~~~~~v~~~ 45 (67)
T 2kyz_A 4 VLYVPDISCNHCKMRISKALEEL-GVKNYEVSVEEKKVVVETE 45 (67)
T ss_dssp EEECGGGGSHHHHHHHHHHHHHH-TCSEEEEETTTTEEEEECS
T ss_pred EEEECCcCcHHHHHHHHHHHHHc-CCeEEEEECCCCEEEEEEC
Confidence 3444 999999999999999999 9999999999999999887
No 16
>1mwy_A ZNTA; open-faced beta-sandwich fold, beta-alpha-beta-BETA-alpha- beta, hydrolase; NMR {Escherichia coli} SCOP: d.58.17.1 PDB: 1mwz_A
Probab=98.95 E-value=4.6e-09 Score=64.22 Aligned_cols=41 Identities=17% Similarity=0.442 Sum_probs=38.7
Q ss_pred EecccChhHHHHHHHHHhcCCCceEEEEeccCCEEEEEeec
Q 033120 52 SADIRCSECQKRVADMMSKLNETESVLVNVSEKKVTLTSRY 92 (126)
Q Consensus 52 kvgMsC~hC~krVkkaLskL~GVesV~VDLe~KkVtVtg~~ 92 (126)
..||+|.+|+.+|+++|.+++||.++.||+..++++|+++.
T Consensus 9 v~gm~C~~C~~~ie~~l~~~~gV~~~~v~~~~~~~~v~~~~ 49 (73)
T 1mwy_A 9 VSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADN 49 (73)
T ss_dssp EESCCSTTHHHHHHHHHHTSSSEEEEEEETTTTEEEEEESS
T ss_pred ECCcCCHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECC
Confidence 45799999999999999999999999999999999999874
No 17
>2aj0_A Probable cadmium-transporting ATPase; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta, metal binding protein, hydrolase; NMR {Listeria monocytogenes} PDB: 2aj1_A
Probab=98.91 E-value=2.5e-09 Score=65.37 Aligned_cols=44 Identities=18% Similarity=0.448 Sum_probs=39.6
Q ss_pred EEEE-ecccChhHHHHHHHHHhcCCCceEEEEeccCCEEEEEeec
Q 033120 49 VVLS-ADIRCSECQKRVADMMSKLNETESVLVNVSEKKVTLTSRY 92 (126)
Q Consensus 49 VvLk-vgMsC~hC~krVkkaLskL~GVesV~VDLe~KkVtVtg~~ 92 (126)
+.|. .||+|.+|+.+|+++|.+++||.++.||+..++++|.++.
T Consensus 5 ~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~ 49 (71)
T 2aj0_A 5 TVYRVDGLSCTNCAAKFERNVKEIEGVTEAIVNFGASKITVTGEA 49 (71)
T ss_dssp EEEEEESCCCHHHHHHHHHHHHHSTTEEEEEECCSSEEEEEEESC
T ss_pred EEEEECCcccHHHHHHHHHHHHcCCCeEEEEEECCCCEEEEEecC
Confidence 3443 5799999999999999999999999999999999999874
No 18
>2roe_A Heavy metal binding protein; NMR {Thermus thermophilus} PDB: 2rog_A
Probab=98.91 E-value=2e-09 Score=64.98 Aligned_cols=37 Identities=19% Similarity=0.412 Sum_probs=35.6
Q ss_pred ecccChhHHHHHHHHHhcCCCceEEEEeccCCEEEEE
Q 033120 53 ADIRCSECQKRVADMMSKLNETESVLVNVSEKKVTLT 89 (126)
Q Consensus 53 vgMsC~hC~krVkkaLskL~GVesV~VDLe~KkVtVt 89 (126)
.||+|.+|+.+|+++|.+++||.++.||+..++++|.
T Consensus 7 ~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~ 43 (66)
T 2roe_A 7 EGMTCNHCVMAVTKALKKVPGVEKVEVSLEKGEALVE 43 (66)
T ss_dssp ECCCSHHHHHHHHHHHHTSTTCCCEEECSSSCBEEEC
T ss_pred CCeEcHHHHHHHHHHHHcCCCeEEEEEEeCCCEEEEC
Confidence 5899999999999999999999999999999999993
No 19
>1kvi_A Copper-transporting ATPase 1; menkes, Cu-protein, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1kvj_A
Probab=98.91 E-value=2.4e-09 Score=66.21 Aligned_cols=46 Identities=22% Similarity=0.430 Sum_probs=41.0
Q ss_pred eEEEEEe-cccChhHHHHHHHHHhcCCCceEEEEeccCCEEEEEeec
Q 033120 47 QEVVLSA-DIRCSECQKRVADMMSKLNETESVLVNVSEKKVTLTSRY 92 (126)
Q Consensus 47 Q~VvLkv-gMsC~hC~krVkkaLskL~GVesV~VDLe~KkVtVtg~~ 92 (126)
+.+.|.+ ||+|.+|+.+|+++|.+++||.++.||+..++++|+++.
T Consensus 8 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~ 54 (79)
T 1kvi_A 8 NSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDP 54 (79)
T ss_dssp EEEEEEECCCCSTTTHHHHHHHHHHSSSCCCEEEEGGGTEEEEEECT
T ss_pred EEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECC
Confidence 3445554 899999999999999999999999999999999999873
No 20
>1q8l_A Copper-transporting ATPase 1; metal binding protein; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1s6o_A 1s6u_A
Probab=98.91 E-value=2.8e-09 Score=67.82 Aligned_cols=46 Identities=13% Similarity=0.374 Sum_probs=41.0
Q ss_pred eEEEEEe-cccChhHHHHHHHHHhcCCCceEEEEeccCCEEEEEeec
Q 033120 47 QEVVLSA-DIRCSECQKRVADMMSKLNETESVLVNVSEKKVTLTSRY 92 (126)
Q Consensus 47 Q~VvLkv-gMsC~hC~krVkkaLskL~GVesV~VDLe~KkVtVtg~~ 92 (126)
+.+.|.+ ||+|.+|+.+|+++|.+++||.++.||+..++++|+++.
T Consensus 9 ~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~ 55 (84)
T 1q8l_A 9 VVLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQP 55 (84)
T ss_dssp EEEEEEECCTTTCSSCHHHHHHHHTCTTEEEEEECSTTTEEEEEECT
T ss_pred eEEEEEECCcccHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECC
Confidence 3445554 899999999999999999999999999999999999873
No 21
>2ldi_A Zinc-transporting ATPase; metal homeostasis, metallochaperones, hydrolase; NMR {Synechocystis SP}
Probab=98.90 E-value=5.8e-09 Score=61.58 Aligned_cols=41 Identities=20% Similarity=0.438 Sum_probs=38.5
Q ss_pred EecccChhHHHHHHHHHhcCCCceEEEEeccCCEEEEEeec
Q 033120 52 SADIRCSECQKRVADMMSKLNETESVLVNVSEKKVTLTSRY 92 (126)
Q Consensus 52 kvgMsC~hC~krVkkaLskL~GVesV~VDLe~KkVtVtg~~ 92 (126)
..||+|.+|+.+|+++|.+++||.++.+|+..++++|+++.
T Consensus 9 v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~ 49 (71)
T 2ldi_A 9 VGGMRCAACASSIERALERLKGVAEASVTVATGRLTVTYDP 49 (71)
T ss_dssp EETCTTSGGGHHHHTGGGGCSSEEEEEEETTTTEEEEEECT
T ss_pred ECCccCHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECC
Confidence 45799999999999999999999999999999999999873
No 22
>1cpz_A Protein (COPZ); copper chaperone, metal transport, gene regulation; NMR {Enterococcus hirae} SCOP: d.58.17.1
Probab=98.87 E-value=3e-09 Score=63.00 Aligned_cols=40 Identities=15% Similarity=0.436 Sum_probs=38.2
Q ss_pred ecccChhHHHHHHHHHhcCCCceEEEEeccCCEEEEEeec
Q 033120 53 ADIRCSECQKRVADMMSKLNETESVLVNVSEKKVTLTSRY 92 (126)
Q Consensus 53 vgMsC~hC~krVkkaLskL~GVesV~VDLe~KkVtVtg~~ 92 (126)
.||+|.+|+.+|+++|.+++||.++.+|+..++++|+++.
T Consensus 7 ~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~ 46 (68)
T 1cpz_A 7 KGMSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDE 46 (68)
T ss_dssp SCCCSSSHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECT
T ss_pred CCeeCHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECC
Confidence 5899999999999999999999999999999999999873
No 23
>2qif_A Copper chaperone COPZ; tetranuclear Cu(I) cluster; 1.50A {Bacillus subtilis} SCOP: d.58.17.1 PDB: 3i9z_A 1k0v_A 1p8g_A
Probab=98.87 E-value=1.1e-08 Score=59.57 Aligned_cols=41 Identities=24% Similarity=0.426 Sum_probs=38.4
Q ss_pred EecccChhHHHHHHHHHhcCCCceEEEEeccCCEEEEEeec
Q 033120 52 SADIRCSECQKRVADMMSKLNETESVLVNVSEKKVTLTSRY 92 (126)
Q Consensus 52 kvgMsC~hC~krVkkaLskL~GVesV~VDLe~KkVtVtg~~ 92 (126)
..||+|.+|+.+|+++|.+++||.++.+|+..++++|+++.
T Consensus 8 v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~ 48 (69)
T 2qif_A 8 VEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDA 48 (69)
T ss_dssp EECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECT
T ss_pred ECCcccHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECC
Confidence 35799999999999999999999999999999999999873
No 24
>1fvq_A Copper-transporting ATPase; APO-CCC2A, hydrolase; NMR {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1fvs_A 2ggp_B
Probab=98.86 E-value=8.5e-09 Score=61.84 Aligned_cols=39 Identities=13% Similarity=0.345 Sum_probs=37.6
Q ss_pred ecccChhHHHHHHHHHhcCCCceEEEEeccCCEEEEEee
Q 033120 53 ADIRCSECQKRVADMMSKLNETESVLVNVSEKKVTLTSR 91 (126)
Q Consensus 53 vgMsC~hC~krVkkaLskL~GVesV~VDLe~KkVtVtg~ 91 (126)
.||+|.+|+.+|+++|.+++||.++.+|+..++++|+++
T Consensus 9 ~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~ 47 (72)
T 1fvq_A 9 HGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYD 47 (72)
T ss_dssp CSCCSHHHHHHHHHHHHTSSSEEEECCBTTTTEEEEEEC
T ss_pred CCeecHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEEC
Confidence 479999999999999999999999999999999999987
No 25
>1y3j_A Copper-transporting ATPase 1; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta structure, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1y3k_A
Probab=98.86 E-value=3.4e-09 Score=65.45 Aligned_cols=45 Identities=13% Similarity=0.302 Sum_probs=40.3
Q ss_pred EEEEE-ecccChhHHHHHHHHHhcCCCceEEEEeccCCEEEEEeec
Q 033120 48 EVVLS-ADIRCSECQKRVADMMSKLNETESVLVNVSEKKVTLTSRY 92 (126)
Q Consensus 48 ~VvLk-vgMsC~hC~krVkkaLskL~GVesV~VDLe~KkVtVtg~~ 92 (126)
.+.|. .||+|.+|+.+|+++|.+++||.++.||+..++++|+++.
T Consensus 4 ~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~ 49 (77)
T 1y3j_A 4 KCYIQVTGMTCASCVANIERNLRREEGIYSILVALMAGKAEVRYNP 49 (77)
T ss_dssp EEEEEESCGGGCSHHHHHHHHHTTSSSEEECCCBTTTTBEEEEECT
T ss_pred EEEEEECCeeCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECC
Confidence 34444 5899999999999999999999999999999999999873
No 26
>2k2p_A Uncharacterized protein ATU1203; putative metal-binding domain ATU1203, ontario centre for ST proteomics, structural genomics; NMR {Agrobacterium tumefaciens str}
Probab=98.85 E-value=4.1e-09 Score=69.44 Aligned_cols=46 Identities=13% Similarity=0.291 Sum_probs=40.9
Q ss_pred eEEEEEe-cccChhHHHHHHHHHhcCCCceEEEEeccCCEEEEEeec
Q 033120 47 QEVVLSA-DIRCSECQKRVADMMSKLNETESVLVNVSEKKVTLTSRY 92 (126)
Q Consensus 47 Q~VvLkv-gMsC~hC~krVkkaLskL~GVesV~VDLe~KkVtVtg~~ 92 (126)
+++.|.+ ||+|.+|+.+|+++|.+++||.++.||+..++++|+++.
T Consensus 22 ~~~~l~V~Gm~C~~C~~~Ie~aL~~~~GV~~v~v~l~~~~~~V~~~~ 68 (85)
T 2k2p_A 22 AGLSFHVEDMTCGHCAGVIKGAIEKTVPGAAVHADPASRTVVVGGVS 68 (85)
T ss_dssp CEEEEECTTCCHHHHHHHHHHHHHHHSTTCEEEEETTTTEEEEESCC
T ss_pred cEEEEEECCCCCHHHHHHHHHHHhcCCCeeEEEEECCCCEEEEEecC
Confidence 3445655 799999999999999999999999999999999999753
No 27
>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}
Probab=98.85 E-value=8.2e-09 Score=70.42 Aligned_cols=46 Identities=13% Similarity=0.305 Sum_probs=41.6
Q ss_pred eEEEEEe-cccChhHHHHHHHHHhcCCCceEEEEeccCCEEEEEeec
Q 033120 47 QEVVLSA-DIRCSECQKRVADMMSKLNETESVLVNVSEKKVTLTSRY 92 (126)
Q Consensus 47 Q~VvLkv-gMsC~hC~krVkkaLskL~GVesV~VDLe~KkVtVtg~~ 92 (126)
+.+.|.+ ||+|.+|+.+|+++|++++||.++.||+..++++|+++.
T Consensus 80 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~ 126 (149)
T 2ew9_A 80 GNIELTITGMTCASCVHNIESKLTRTNGITYASVALATSKALVKFDP 126 (149)
T ss_dssp SEEEEEEESCCSHHHHHHHHHHHHHSSSCCEEEEETTTTEEEEECCT
T ss_pred ceeEEEEEeccCHHHHHHHHHHHhcCCCeEEEEEEcCCCEEEEEECC
Confidence 4555655 999999999999999999999999999999999999873
No 28
>2g9o_A Copper-transporting ATPase 1; menkes disease, solution structure, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} PDB: 2ga7_A
Probab=98.84 E-value=1.1e-08 Score=66.88 Aligned_cols=41 Identities=15% Similarity=0.389 Sum_probs=38.8
Q ss_pred EecccChhHHHHHHHHHhcCCCceEEEEeccCCEEEEEeec
Q 033120 52 SADIRCSECQKRVADMMSKLNETESVLVNVSEKKVTLTSRY 92 (126)
Q Consensus 52 kvgMsC~hC~krVkkaLskL~GVesV~VDLe~KkVtVtg~~ 92 (126)
..||+|.+|+.+|+++|.+++||.++.||+..++++|+++.
T Consensus 9 v~Gm~C~~C~~~Ie~~L~~~~GV~~v~v~l~~~~~~V~~~~ 49 (90)
T 2g9o_A 9 IDGMHCKSCVSNIESTLSALQYVSSIVVSLENRSAIVVYNA 49 (90)
T ss_dssp EESCCHHHHHHHHHHHHTTCTTEEEEEEETTTTEEEEEECC
T ss_pred ECCcCCHHHHHHHHHHHHcCCCeeEEEEEccCCEEEEEECC
Confidence 46899999999999999999999999999999999999873
No 29
>1opz_A Potential copper-transporting ATPase; mutation, folding, abbab fold, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 1oq3_A 1oq6_A
Probab=98.84 E-value=1.2e-08 Score=61.41 Aligned_cols=46 Identities=15% Similarity=0.424 Sum_probs=40.7
Q ss_pred eEEEEE-ecccChhHHHHHHHHHhcCCCceEEEEeccCCEEEEEeec
Q 033120 47 QEVVLS-ADIRCSECQKRVADMMSKLNETESVLVNVSEKKVTLTSRY 92 (126)
Q Consensus 47 Q~VvLk-vgMsC~hC~krVkkaLskL~GVesV~VDLe~KkVtVtg~~ 92 (126)
+.+.|. .||+|.+|+.+|+++|.+++||.++.+|+..++++|+++.
T Consensus 6 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~ 52 (76)
T 1opz_A 6 KEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDP 52 (76)
T ss_dssp EEEEEEEESCCSTTHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECT
T ss_pred eEEEEEECCcccHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECC
Confidence 344454 5799999999999999999999999999999999999873
No 30
>1yjr_A Copper-transporting ATPase 1; metallochaperone, protein-protein interaction, copper(I), metal homeostasis, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1yjt_A 1yju_A 1yjv_A
Probab=98.83 E-value=1.2e-08 Score=61.67 Aligned_cols=41 Identities=12% Similarity=0.279 Sum_probs=38.7
Q ss_pred EecccChhHHHHHHHHHhcCCCceEEEEeccCCEEEEEeec
Q 033120 52 SADIRCSECQKRVADMMSKLNETESVLVNVSEKKVTLTSRY 92 (126)
Q Consensus 52 kvgMsC~hC~krVkkaLskL~GVesV~VDLe~KkVtVtg~~ 92 (126)
..||+|.+|+.+|+++|.+++||.++.+|+..++++|+++.
T Consensus 10 v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~ 50 (75)
T 1yjr_A 10 VRGMTCASCVHKIESSLTKHRGILYCSVALATNKAHIKYDP 50 (75)
T ss_dssp EETCCTTTHHHHHHHHHTTSTTEEEEEEETTTTEEEEEECT
T ss_pred ECCcccHHHHHHHHHHHHcCCCEEEEEEEecCCEEEEEECC
Confidence 36899999999999999999999999999999999999873
No 31
>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A
Probab=98.76 E-value=1.2e-08 Score=70.19 Aligned_cols=45 Identities=18% Similarity=0.430 Sum_probs=42.0
Q ss_pred eEEEEEe-cccChhHHHHHHHHHhcCCCceEEEEeccCCEEEEEee
Q 033120 47 QEVVLSA-DIRCSECQKRVADMMSKLNETESVLVNVSEKKVTLTSR 91 (126)
Q Consensus 47 Q~VvLkv-gMsC~hC~krVkkaLskL~GVesV~VDLe~KkVtVtg~ 91 (126)
+.+.|.+ ||+|.+|+.+|+++|.+++||.++.||+..++++|+++
T Consensus 74 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~ 119 (151)
T 1p6t_A 74 EKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYN 119 (151)
T ss_dssp EEEEEEESSCCSSSHHHHHHHHHTTSSSEEECCEETTTTEEEEEEC
T ss_pred cccEEEecCCCCHHHHHHHHHHHhcCCCceEEEEEccCCEEEEEEC
Confidence 5666776 89999999999999999999999999999999999987
No 32
>1qup_A Superoxide dismutase 1 copper chaperone; two domains, beta-alpha-beta-BETA-alpha-beta and beta barrel; 1.80A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1
Probab=98.75 E-value=2.1e-08 Score=78.28 Aligned_cols=58 Identities=9% Similarity=0.256 Sum_probs=47.3
Q ss_pred eEEEEEecccChhHHHHHHHHHhcCCCceEEEEeccCCEEEEEeecCcchhhhhhhhhhh
Q 033120 47 QEVVLSADIRCSECQKRVADMMSKLNETESVLVNVSEKKVTLTSRYPVVVEVSKRQITAV 106 (126)
Q Consensus 47 Q~VvLkvgMsC~hC~krVkkaLskL~GVesV~VDLe~KkVtVtg~~~~d~kV~~~qI~~i 106 (126)
.+++|++.|+|.+|+.+|+++|++++||.+++||+..++++|++..+. ....+.|...
T Consensus 6 ~~~~l~V~MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~~~v~V~~~~~~--~~I~~aI~~~ 63 (222)
T 1qup_A 6 YEATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAP--STIINTLRNC 63 (222)
T ss_dssp EEEEEECCCCSTTHHHHHHHHHTTCTTEEEEEEETTTTEEEEEESSCH--HHHHHHHHHT
T ss_pred eEEEEEEccccHHHHHHHHHHHhcCCCeeEEEEEcCCCEEEEeccCCH--HHHHHHHHHc
Confidence 456777779999999999999999999999999999999999976433 2344555444
No 33
>2kkh_A Putative heavy metal transporter; zinc transport, metal binding, metal selectivity, ferredoxin fold, ATP-binding, hydrolase; NMR {Arabidopsis thaliana}
Probab=98.68 E-value=8.6e-08 Score=62.48 Aligned_cols=44 Identities=14% Similarity=0.235 Sum_probs=39.8
Q ss_pred EEEE-ecccChhHHHHHHHHHhcCCCceEEEEeccCCEEEEEeec
Q 033120 49 VVLS-ADIRCSECQKRVADMMSKLNETESVLVNVSEKKVTLTSRY 92 (126)
Q Consensus 49 VvLk-vgMsC~hC~krVkkaLskL~GVesV~VDLe~KkVtVtg~~ 92 (126)
+.|. .||+|.+|+.+|+++|.+++||.++.||+..+.++|+++.
T Consensus 18 ~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~ 62 (95)
T 2kkh_A 18 SYFDVLGICCTSEVPIIENILKSLDGVKEYSVIVPSRTVIVVHDS 62 (95)
T ss_dssp EEEEETTCCTTTTHHHHHHHHHHSSSEEEEEEETTTTEEEEEECT
T ss_pred EEEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEccCCEEEEEECC
Confidence 3444 4899999999999999999999999999999999999874
No 34
>1jww_A Potential copper-transporting ATPase; beta-alpha-beta-BETA-alpha-beta, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 2voy_A 1kqk_A
Probab=98.67 E-value=3.5e-08 Score=60.42 Aligned_cols=41 Identities=20% Similarity=0.409 Sum_probs=38.4
Q ss_pred EecccChhHHHHHHHHHhcCCCceEEEEeccCCEEEEEeec
Q 033120 52 SADIRCSECQKRVADMMSKLNETESVLVNVSEKKVTLTSRY 92 (126)
Q Consensus 52 kvgMsC~hC~krVkkaLskL~GVesV~VDLe~KkVtVtg~~ 92 (126)
..||+|.+|+.+|+++|.+++||.++.+|+..++++|.++.
T Consensus 9 v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~ 49 (80)
T 1jww_A 9 IEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNP 49 (80)
T ss_dssp EESCCCHHHHHHHHHHHHTSTTEEECCCCSSSSEEEEEECT
T ss_pred ECCccCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECC
Confidence 46799999999999999999999999999999999998873
No 35
>2ofg_X Zinc-transporting ATPase; ferredoxin-like fold, beta-alpha-beta-BETA-alpha-beta, struc genomics, hydrolase, membrane protein; NMR {Synechocystis SP} PDB: 2ofh_X
Probab=98.66 E-value=9.1e-08 Score=65.19 Aligned_cols=45 Identities=16% Similarity=0.389 Sum_probs=40.6
Q ss_pred EEEEE-ecccChhHHHHHHHHHhcCCCceEEEEeccCCEEEEEeec
Q 033120 48 EVVLS-ADIRCSECQKRVADMMSKLNETESVLVNVSEKKVTLTSRY 92 (126)
Q Consensus 48 ~VvLk-vgMsC~hC~krVkkaLskL~GVesV~VDLe~KkVtVtg~~ 92 (126)
.+.|. .+|+|.+|+.+|+++|.+++||.++.||+..++++|+++.
T Consensus 9 ~~~l~v~Gm~C~~Ca~~Ie~~L~~~~GV~~v~v~~~~~~~~V~~~~ 54 (111)
T 2ofg_X 9 TQQMQVGGMDCTSCKLKIEGSLERLKGVAEASVTVATGRLTVTYDP 54 (111)
T ss_dssp EEEEEESCCCGGGTHHHHHHHHTTSSSEEEEEEETTTTEEEEEECT
T ss_pred EEEEEECCcCCHHHHHHHHHHHHcCCCeeEEEEECCCCEEEEEECC
Confidence 34455 5799999999999999999999999999999999999873
No 36
>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}
Probab=98.65 E-value=5.7e-08 Score=66.20 Aligned_cols=46 Identities=22% Similarity=0.337 Sum_probs=40.8
Q ss_pred eEEEEE-ecccChhHHHHHHHHHhcCCCceEEEEeccCCEEEEEeec
Q 033120 47 QEVVLS-ADIRCSECQKRVADMMSKLNETESVLVNVSEKKVTLTSRY 92 (126)
Q Consensus 47 Q~VvLk-vgMsC~hC~krVkkaLskL~GVesV~VDLe~KkVtVtg~~ 92 (126)
+.+.|. .||+|.+|+.+|+++|.+++||.++.||+..++++|.++.
T Consensus 4 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~ 50 (149)
T 2ew9_A 4 QKCFLQIKGMTCASCVSNIERNLQKEAGVLSVLVALMAGKAEIKYDP 50 (149)
T ss_dssp EEEEEEEECCCSSSHHHHHHHHHHTTSSCCCEEEETTTTEEEEEECT
T ss_pred EEEEEEECCeecHHHHHHHHHHHhcCCCcEEEEEEecCCEEEEEEcC
Confidence 344454 5999999999999999999999999999999999999863
No 37
>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}
Probab=98.63 E-value=9.1e-08 Score=70.21 Aligned_cols=46 Identities=17% Similarity=0.432 Sum_probs=41.6
Q ss_pred eEEEEEe-cccChhHHHHHHHHHhcCCCceEEEEeccCCEEEEEeec
Q 033120 47 QEVVLSA-DIRCSECQKRVADMMSKLNETESVLVNVSEKKVTLTSRY 92 (126)
Q Consensus 47 Q~VvLkv-gMsC~hC~krVkkaLskL~GVesV~VDLe~KkVtVtg~~ 92 (126)
+.+.|.+ ||+|.+|+.+|+++|.+++||.++.||+..++++|+++.
T Consensus 122 ~~~~l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~ 168 (202)
T 2rop_A 122 STTLIAIAGMTCASCVHSIEGMISQLEGVQQISVSLAEGTATVLYNP 168 (202)
T ss_dssp EEEEEEESCCCSTHHHHHHHHHGGGSSSEEEEEEETTTTEEEEEECT
T ss_pred eEEEEEECCccCHHHHHHHHHHHHcCCCeEEEEEEccCCEEEEEECC
Confidence 4556665 799999999999999999999999999999999999873
No 38
>1jk9_B CCS, copper chaperone for superoxide dismutase; protein-protein complex, heterodimer, metallochaperone, amyotrophic lateral sclerosis; 2.90A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1
Probab=98.59 E-value=1.1e-07 Score=75.77 Aligned_cols=58 Identities=9% Similarity=0.256 Sum_probs=46.6
Q ss_pred eEEEEEecccChhHHHHHHHHHhcCCCceEEEEeccCCEEEEEeecCcchhhhhhhhhhh
Q 033120 47 QEVVLSADIRCSECQKRVADMMSKLNETESVLVNVSEKKVTLTSRYPVVVEVSKRQITAV 106 (126)
Q Consensus 47 Q~VvLkvgMsC~hC~krVkkaLskL~GVesV~VDLe~KkVtVtg~~~~d~kV~~~qI~~i 106 (126)
..++|.+.|+|.+|+.+|+++|++++||.+++||+..++++|++..+. ....+.|...
T Consensus 7 ~~~~l~V~MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~~~v~V~~~~~~--~~I~~aIe~~ 64 (249)
T 1jk9_B 7 YEATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAP--STIINTLRNC 64 (249)
T ss_dssp EEEEEECCCCSSSHHHHHHHHHTTCTTEEEEEEETTTTEEEEEESSCH--HHHHHHHHTT
T ss_pred eeEEEEEeeccHHHHHHHHHHHhccCCeeEEEEEcCCCeEEEecCCCH--HHHHHHHHHh
Confidence 345677779999999999999999999999999999999999976433 2344444443
No 39
>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}
Probab=98.52 E-value=2.2e-07 Score=68.20 Aligned_cols=46 Identities=15% Similarity=0.336 Sum_probs=40.5
Q ss_pred eEEEEE-ecccChhHHHHHHHHHhcCCCceEEEEeccCCEEEEEeec
Q 033120 47 QEVVLS-ADIRCSECQKRVADMMSKLNETESVLVNVSEKKVTLTSRY 92 (126)
Q Consensus 47 Q~VvLk-vgMsC~hC~krVkkaLskL~GVesV~VDLe~KkVtVtg~~ 92 (126)
+.+.|. .||+|.+|+.+|+++|.+++||.++.||+..++++|.++.
T Consensus 20 ~~~~l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~ 66 (202)
T 2rop_A 20 VTLQLRIDGMHCKSCVLNIEENIGQLLGVQSIQVSLENKTAQVKYDP 66 (202)
T ss_dssp CEEEEEEESGGGSTHHHHHHHHTTSBTTEEEEEEETTTTEEEEEECT
T ss_pred EEEEEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECC
Confidence 334444 5799999999999999999999999999999999999874
No 40
>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A
Probab=98.22 E-value=3.3e-06 Score=57.85 Aligned_cols=41 Identities=15% Similarity=0.376 Sum_probs=38.1
Q ss_pred EecccChhHHHHHHHHHhcCCCceEEEEeccCCEEEEEeec
Q 033120 52 SADIRCSECQKRVADMMSKLNETESVLVNVSEKKVTLTSRY 92 (126)
Q Consensus 52 kvgMsC~hC~krVkkaLskL~GVesV~VDLe~KkVtVtg~~ 92 (126)
..||+|.+|+.+|+++|.+++||.++.||+..++++|.++.
T Consensus 12 v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~ 52 (151)
T 1p6t_A 12 VSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDP 52 (151)
T ss_dssp EESCCSSHHHHHHHHHHTTSSSEEEEEEEGGGTEEEEEECT
T ss_pred ECCCcCHHHHHHHHHHHhcCCCeeEEEEEccCCEEEEEEcC
Confidence 35799999999999999999999999999999999998763
No 41
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=98.13 E-value=3.7e-06 Score=74.42 Aligned_cols=41 Identities=20% Similarity=0.369 Sum_probs=38.9
Q ss_pred EecccChhHHHHHHHHHhcCCCceEEEEeccCCEEEEEeec
Q 033120 52 SADIRCSECQKRVADMMSKLNETESVLVNVSEKKVTLTSRY 92 (126)
Q Consensus 52 kvgMsC~hC~krVkkaLskL~GVesV~VDLe~KkVtVtg~~ 92 (126)
-.||+|.+|+.+|+++|++++||++++||+..++++|+++.
T Consensus 8 V~GM~Ca~Ca~~Ie~~L~~~~GV~~v~Vnl~~~~~~V~~d~ 48 (723)
T 3j09_A 8 VTGMTCAMCVKSIETAVGSLEGVEEVRVNLATETAFIRFDE 48 (723)
T ss_dssp EETCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECT
T ss_pred eCCCCchHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEeCC
Confidence 46899999999999999999999999999999999999874
No 42
>2jsx_A Protein NAPD; TAT, proofreading, cytoplasm, chaperone; NMR {Escherichia coli K12} PDB: 2pq4_A
Probab=84.87 E-value=3.1 Score=28.52 Aligned_cols=46 Identities=11% Similarity=0.153 Sum_probs=33.2
Q ss_pred HHHHHHHHhcCCCceEEEEeccCCEEEEEeecCcchhhhhhhhhhhh
Q 033120 61 QKRVADMMSKLNETESVLVNVSEKKVTLTSRYPVVVEVSKRQITAVR 107 (126)
Q Consensus 61 ~krVkkaLskL~GVesV~VDLe~KkVtVtg~~~~d~kV~~~qI~~i~ 107 (126)
...|.++|.+++||+-.-+|-+.+++.|+-..+.. .-..+.|..|+
T Consensus 19 ~~~V~~~L~~ipgvEi~~~~~~~GkiVV~iEa~~~-~~l~~~i~~I~ 64 (95)
T 2jsx_A 19 ISDISTQLNAFPGCEVAVSDAPSGQLIVVVEAEDS-ETLIQTIESVR 64 (95)
T ss_dssp HHHHHHHHTTSTTEEEEEEETTTTEEEEEEEESSH-HHHHHHHHHHT
T ss_pred HHHHHHHHHCCCCeEEEEecCCCCCEEEEEEeCCH-HHHHHHHHHHh
Confidence 67899999999999655678888899888876553 23333555544
No 43
>3cq1_A Putative uncharacterized protein TTHB138; DTDP-4-keto-L-rhamnose reductase, plasmid, oxidoreductase, structural genomics, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2cu6_A 3cq2_A 3cq3_A*
Probab=83.29 E-value=1.8 Score=29.23 Aligned_cols=34 Identities=24% Similarity=0.384 Sum_probs=28.0
Q ss_pred EEEEEecccChhHH------HHHHHHHhcCCCceEEEEec
Q 033120 48 EVVLSADIRCSECQ------KRVADMMSKLNETESVLVNV 81 (126)
Q Consensus 48 ~VvLkvgMsC~hC~------krVkkaLskL~GVesV~VDL 81 (126)
.|.+...+.+.+|- ..|+++|..++||++|+|++
T Consensus 42 ~V~v~l~lt~~~cp~~~~l~~~i~~al~~l~gv~~V~V~l 81 (103)
T 3cq1_A 42 RAYVRMTLTTPGCPLHDSLGEAVRQALSRLPGVEEVEVEV 81 (103)
T ss_dssp EEEEEECCSSSSCCSSCHHHHHHHHHHHTSTTCCEEEEEE
T ss_pred EEEEEEEECCCCCcHHHHHHHHHHHHHHhCCCceeEEEEE
Confidence 56677777888884 67999999999999998874
No 44
>3lno_A Putative uncharacterized protein; alpha-beta fold, structural genomics, center for structural genomics of infectious diseases, csgid; 2.10A {Bacillus anthracis} SCOP: d.52.8.0
Probab=82.43 E-value=1.3 Score=30.42 Aligned_cols=35 Identities=20% Similarity=0.414 Sum_probs=28.3
Q ss_pred EEEEEecccChhH------HHHHHHHH-hcCCCceEEEEecc
Q 033120 48 EVVLSADIRCSEC------QKRVADMM-SKLNETESVLVNVS 82 (126)
Q Consensus 48 ~VvLkvgMsC~hC------~krVkkaL-skL~GVesV~VDLe 82 (126)
.|.+..-+...+| ...|+++| ..++||++|+|++.
T Consensus 45 ~V~V~ltlt~p~cp~~~~i~~~i~~al~~~l~Gv~~V~V~l~ 86 (108)
T 3lno_A 45 NAVITMTMTSIGCPMAGQIVSDVKKVLSTNVPEVNEIEVNVV 86 (108)
T ss_dssp CEEEEECCSCTTCTTHHHHHHHHHHHHHHHCTTCCCEEEEEC
T ss_pred eEEEEEEECCCCCcHHHHHHHHHHHHHHHhCCCCceEEEEEE
Confidence 4667777778888 66899999 99999999987754
No 45
>1uwd_A Hypothetical protein TM0487; similar to PAAD protein, alpha/beta fold,structural genomics joint center for structural genomics, JCSG; NMR {Thermotoga maritima} SCOP: d.52.8.2 PDB: 1wcj_A
Probab=79.21 E-value=2.9 Score=28.07 Aligned_cols=34 Identities=15% Similarity=0.317 Sum_probs=26.8
Q ss_pred EEEEEecccChhHH------HHHHHHHhcCCCceEEEEec
Q 033120 48 EVVLSADIRCSECQ------KRVADMMSKLNETESVLVNV 81 (126)
Q Consensus 48 ~VvLkvgMsC~hC~------krVkkaLskL~GVesV~VDL 81 (126)
.|.+...+.+.+|- ..|+++|..++||++|+|++
T Consensus 43 ~V~v~l~lt~~~cp~~~~l~~~i~~al~~l~gv~~v~V~l 82 (103)
T 1uwd_A 43 NVKVLMTMTTPMCPLAGMILSDAEEAIKKIEGVNNVEVEL 82 (103)
T ss_dssp EEEEEECCSSSCCSSHHHHHHHHHHHHHTSSSCCEEEEEE
T ss_pred EEEEEEEECCCCCcHHHHHHHHHHHHHHhCCCcceEEEEE
Confidence 46666667777774 56899999999999998874
No 46
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=55.58 E-value=16 Score=23.12 Aligned_cols=35 Identities=11% Similarity=0.167 Sum_probs=27.4
Q ss_pred EEEEEecccChhHH-----HHHHHHHhcCCCceEEEEeccC
Q 033120 48 EVVLSADIRCSECQ-----KRVADMMSKLNETESVLVNVSE 83 (126)
Q Consensus 48 ~VvLkvgMsC~hC~-----krVkkaLskL~GVesV~VDLe~ 83 (126)
.|+|-.--.|..|. .++++.|.+. ||.=.++|+..
T Consensus 3 ~v~ly~~~~C~~c~~~~~~~~ak~~L~~~-~i~~~~~di~~ 42 (93)
T 1t1v_A 3 GLRVYSTSVTGSREIKSQQSEVTRILDGK-RIQYQLVDISQ 42 (93)
T ss_dssp CEEEEECSSCSCHHHHHHHHHHHHHHHHT-TCCCEEEETTS
T ss_pred CEEEEEcCCCCCchhhHHHHHHHHHHHHC-CCceEEEECCC
Confidence 36666677899997 8899999985 88766677654
No 47
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=54.55 E-value=19 Score=23.88 Aligned_cols=35 Identities=9% Similarity=-0.013 Sum_probs=27.8
Q ss_pred EEEEEecccChhHHH-----HHHHHHhcCCCceEEEEeccC
Q 033120 48 EVVLSADIRCSECQK-----RVADMMSKLNETESVLVNVSE 83 (126)
Q Consensus 48 ~VvLkvgMsC~hC~k-----rVkkaLskL~GVesV~VDLe~ 83 (126)
.|+|-.--.|..|.. ++++.|.+. ||+=.++|+..
T Consensus 9 ~V~vy~~~~C~~C~~~~~~~~ak~~L~~~-gi~y~~vdI~~ 48 (111)
T 2ct6_A 9 VIRVFIASSSGFVAIKKKQQDVVRFLEAN-KIEFEEVDITM 48 (111)
T ss_dssp CEEEEECSSCSCHHHHHHHHHHHHHHHHT-TCCEEEEETTT
T ss_pred EEEEEEcCCCCCcccchhHHHHHHHHHHc-CCCEEEEECCC
Confidence 366666779999997 899999986 88777777765
No 48
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=51.73 E-value=10 Score=23.36 Aligned_cols=37 Identities=11% Similarity=0.335 Sum_probs=24.4
Q ss_pred ceeeEEEEEecccChhHHHHHHHHHhcCCCceEEEEecc
Q 033120 44 PLVQEVVLSADIRCSECQKRVADMMSKLNETESVLVNVS 82 (126)
Q Consensus 44 p~~Q~VvLkvgMsC~hC~krVkkaLskL~GVesV~VDLe 82 (126)
+....|+|--.-.|..|.+ ++..|.++ |++=-.+|+.
T Consensus 9 ~~M~~v~ly~~~~Cp~C~~-~~~~L~~~-gi~~~~~~v~ 45 (92)
T 3ic4_A 9 QGMAEVLMYGLSTCPHCKR-TLEFLKRE-GVDFEVIWID 45 (92)
T ss_dssp TTCSSSEEEECTTCHHHHH-HHHHHHHH-TCCCEEEEGG
T ss_pred CCCceEEEEECCCChHHHH-HHHHHHHc-CCCcEEEEee
Confidence 3344466777778999975 77888886 6654444443
No 49
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=47.16 E-value=31 Score=23.54 Aligned_cols=33 Identities=18% Similarity=0.582 Sum_probs=24.4
Q ss_pred EEEEEecccChhHHHHHHHHHhcCCC---ceEEEEec
Q 033120 48 EVVLSADIRCSECQKRVADMMSKLNE---TESVLVNV 81 (126)
Q Consensus 48 ~VvLkvgMsC~hC~krVkkaLskL~G---VesV~VDL 81 (126)
.|++-..-.|..|.+.+++.|.++ | +.=..+|+
T Consensus 38 ~Vvvy~~~~Cp~C~~a~k~~L~~~-~~~~i~~~~vdv 73 (129)
T 3ctg_A 38 EVFVAAKTYCPYCKATLSTLFQEL-NVPKSKALVLEL 73 (129)
T ss_dssp SEEEEECTTCHHHHHHHHHHHTTS-CCCGGGEEEEEG
T ss_pred CEEEEECCCCCchHHHHHHHHHhc-CccCCCcEEEEc
Confidence 367777789999998779999987 6 54444444
No 50
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=46.90 E-value=40 Score=20.71 Aligned_cols=25 Identities=12% Similarity=0.489 Sum_probs=18.9
Q ss_pred cChhHHHHHHHHHhcCCCceEEEEecc
Q 033120 56 RCSECQKRVADMMSKLNETESVLVNVS 82 (126)
Q Consensus 56 sC~hC~krVkkaLskL~GVesV~VDLe 82 (126)
.|.+|.+ +++.|.+. ||.=-.+|+.
T Consensus 13 ~Cp~C~~-ak~~L~~~-gi~y~~idI~ 37 (87)
T 1aba_A 13 KCGPCDN-AKRLLTVK-KQPFEFINIM 37 (87)
T ss_dssp CCHHHHH-HHHHHHHT-TCCEEEEESC
T ss_pred cCccHHH-HHHHHHHc-CCCEEEEEee
Confidence 8999975 67788885 7776666665
No 51
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=46.35 E-value=35 Score=20.12 Aligned_cols=33 Identities=15% Similarity=0.369 Sum_probs=22.5
Q ss_pred EEEEecccChhHHHHHHHHHhcCCCceEEEEeccC
Q 033120 49 VVLSADIRCSECQKRVADMMSKLNETESVLVNVSE 83 (126)
Q Consensus 49 VvLkvgMsC~hC~krVkkaLskL~GVesV~VDLe~ 83 (126)
|++--.-.|.+|.+ ++..|.+. |++=..+|+.+
T Consensus 3 v~~f~~~~C~~C~~-~~~~l~~~-~i~~~~vdi~~ 35 (81)
T 1h75_A 3 ITIYTRNDCVQCHA-TKRAMENR-GFDFEMINVDR 35 (81)
T ss_dssp EEEEECTTCHHHHH-HHHHHHHT-TCCCEEEETTT
T ss_pred EEEEcCCCChhHHH-HHHHHHHC-CCCeEEEECCC
Confidence 34444558999975 67788885 77666666654
No 52
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=46.00 E-value=33 Score=22.30 Aligned_cols=27 Identities=11% Similarity=0.337 Sum_probs=21.2
Q ss_pred ccChhHHHHHHHHHhcCCCceEEEEeccC
Q 033120 55 IRCSECQKRVADMMSKLNETESVLVNVSE 83 (126)
Q Consensus 55 MsC~hC~krVkkaLskL~GVesV~VDLe~ 83 (126)
-.|.+|.+ +++.|.++ ||.=..+|+.+
T Consensus 28 ~~Cp~C~~-ak~~L~~~-~i~~~~vdi~~ 54 (109)
T 1wik_A 28 AKCGFSKQ-ILEILNST-GVEYETFDILE 54 (109)
T ss_dssp CCSSTHHH-HHHHHHHT-CSCEEEEESSS
T ss_pred CCCchHHH-HHHHHHHc-CCCeEEEECCC
Confidence 79999985 67888886 88777777764
No 53
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=45.56 E-value=36 Score=22.61 Aligned_cols=33 Identities=12% Similarity=0.518 Sum_probs=24.3
Q ss_pred EEEEecccChhHHHHHHHHHhcCCC---ceEEEEecc
Q 033120 49 VVLSADIRCSECQKRVADMMSKLNE---TESVLVNVS 82 (126)
Q Consensus 49 VvLkvgMsC~hC~krVkkaLskL~G---VesV~VDLe 82 (126)
|++-..-.|..|.+.++..|.++ | ++=..+|+.
T Consensus 27 Vvvf~~~~Cp~C~~alk~~L~~~-~~~~i~~~~vdid 62 (118)
T 3c1r_A 27 IFVASKTYCPYCHAALNTLFEKL-KVPRSKVLVLQLN 62 (118)
T ss_dssp EEEEECSSCHHHHHHHHHHHTTS-CCCGGGEEEEEGG
T ss_pred EEEEEcCCCcCHHHHHHHHHHHc-CCCCCCeEEEECc
Confidence 66666678999998768999987 6 655555554
No 54
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=45.46 E-value=39 Score=19.38 Aligned_cols=33 Identities=15% Similarity=0.317 Sum_probs=22.7
Q ss_pred EEEEecccChhHHHHHHHHHhcCCCceEEEEeccC
Q 033120 49 VVLSADIRCSECQKRVADMMSKLNETESVLVNVSE 83 (126)
Q Consensus 49 VvLkvgMsC~hC~krVkkaLskL~GVesV~VDLe~ 83 (126)
|++--.-.|.+|.+ ++..|.++ |++=..+|+..
T Consensus 3 i~~y~~~~C~~C~~-~~~~l~~~-~i~~~~~di~~ 35 (75)
T 1r7h_A 3 ITLYTKPACVQCTA-TKKALDRA-GLAYNTVDISL 35 (75)
T ss_dssp EEEEECTTCHHHHH-HHHHHHHT-TCCCEEEETTT
T ss_pred EEEEeCCCChHHHH-HHHHHHHc-CCCcEEEECCC
Confidence 44555568999975 67788886 77666666653
No 55
>2nyt_A Probable C->U-editing enzyme apobec-2; cytidine deaminase, zinc-ION binding, hydrolase; 2.50A {Homo sapiens} PDB: 2rpz_A
Probab=45.23 E-value=12 Score=28.46 Aligned_cols=32 Identities=19% Similarity=0.455 Sum_probs=26.3
Q ss_pred EEEEEeccc-ChhHHHHHHHHHhcCCCceEEEE
Q 033120 48 EVVLSADIR-CSECQKRVADMMSKLNETESVLV 79 (126)
Q Consensus 48 ~VvLkvgMs-C~hC~krVkkaLskL~GVesV~V 79 (126)
..+|-+.+. |.+|+++|-.+|.+-+||..|..
T Consensus 84 g~TlYvTlePC~~Ca~aIi~al~~~~gI~rVV~ 116 (190)
T 2nyt_A 84 NVTWYVSSSPCAACADRIIKTLSKTKNLRLLIL 116 (190)
T ss_pred CeEEEEEcChHHHHHHHHHHhhhhcCCccEEEE
Confidence 555665554 99999999999999899998776
No 56
>4e6k_G BFD, bacterioferritin-associated ferredoxin; protein complex, iron storage, iron binding, iron mobilizati ferritin, iron homeostasis; HET: HEM; 2.00A {Pseudomonas aeruginosa}
Probab=43.32 E-value=5.6 Score=26.16 Aligned_cols=20 Identities=10% Similarity=0.456 Sum_probs=17.8
Q ss_pred EEecccChhHHHHHHHHHhc
Q 033120 51 LSADIRCSECQKRVADMMSK 70 (126)
Q Consensus 51 LkvgMsC~hC~krVkkaLsk 70 (126)
+++++.|..|...|++.|.+
T Consensus 32 t~aGt~CG~C~~~i~~il~~ 51 (73)
T 4e6k_G 32 TGVGTQCGKCASLAKQVVRE 51 (73)
T ss_dssp HCTTSSSCTTHHHHHHHHHH
T ss_pred hCCCCCCCchHHHHHHHHHH
Confidence 47889999999999999975
No 57
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=40.63 E-value=29 Score=22.27 Aligned_cols=27 Identities=11% Similarity=0.337 Sum_probs=19.9
Q ss_pred ccChhHHHHHHHHHhcCCCceEEEEeccC
Q 033120 55 IRCSECQKRVADMMSKLNETESVLVNVSE 83 (126)
Q Consensus 55 MsC~hC~krVkkaLskL~GVesV~VDLe~ 83 (126)
-.|..|. ++++.|.++ ||.=..+|+.+
T Consensus 30 ~~C~~C~-~~~~~L~~~-~i~~~~vdi~~ 56 (105)
T 2yan_A 30 AKCGFSK-QILEILNST-GVEYETFDILE 56 (105)
T ss_dssp BCTTHHH-HHHHHHHHH-TCCCEEEEGGG
T ss_pred CCCccHH-HHHHHHHHC-CCCeEEEECCC
Confidence 6899996 578888886 77655666654
No 58
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=39.62 E-value=48 Score=20.14 Aligned_cols=33 Identities=15% Similarity=0.404 Sum_probs=23.7
Q ss_pred EEEEEecccChhHHHHHHHHHhcCCCceEEEEecc
Q 033120 48 EVVLSADIRCSECQKRVADMMSKLNETESVLVNVS 82 (126)
Q Consensus 48 ~VvLkvgMsC~hC~krVkkaLskL~GVesV~VDLe 82 (126)
.|++-..-.|.+|.+ ++..|.+. |++=..+|+.
T Consensus 7 ~v~ly~~~~C~~C~~-~~~~L~~~-~i~~~~~di~ 39 (92)
T 2khp_A 7 DVIIYTRPGCPYCAR-AKALLARK-GAEFNEIDAS 39 (92)
T ss_dssp CEEEEECTTCHHHHH-HHHHHHHT-TCCCEEEEST
T ss_pred cEEEEECCCChhHHH-HHHHHHHc-CCCcEEEECC
Confidence 466666778999974 67888886 7765556654
No 59
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=37.93 E-value=47 Score=19.46 Aligned_cols=32 Identities=16% Similarity=0.306 Sum_probs=21.3
Q ss_pred EEEEecccChhHHHHHHHHHhcCCCceEEEEecc
Q 033120 49 VVLSADIRCSECQKRVADMMSKLNETESVLVNVS 82 (126)
Q Consensus 49 VvLkvgMsC~hC~krVkkaLskL~GVesV~VDLe 82 (126)
|++-..-.|.+|. +++..|.+. |+.=..+|+.
T Consensus 3 i~~y~~~~C~~C~-~~~~~l~~~-~i~~~~~~i~ 34 (82)
T 1fov_A 3 VEIYTKETCPYCH-RAKALLSSK-GVSFQELPID 34 (82)
T ss_dssp EEEEECSSCHHHH-HHHHHHHHH-TCCCEEEECT
T ss_pred EEEEECCCChhHH-HHHHHHHHC-CCCcEEEECC
Confidence 4455556899997 467788775 6655555554
No 60
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=37.74 E-value=41 Score=21.57 Aligned_cols=32 Identities=25% Similarity=0.581 Sum_probs=22.9
Q ss_pred EEEEecccChhHHHHHHHHHhcCCCceEEEEecc
Q 033120 49 VVLSADIRCSECQKRVADMMSKLNETESVLVNVS 82 (126)
Q Consensus 49 VvLkvgMsC~hC~krVkkaLskL~GVesV~VDLe 82 (126)
|++-..-.|.+|. ++++.|.++ |++=-.+|+.
T Consensus 21 v~vy~~~~Cp~C~-~~~~~L~~~-~i~~~~~di~ 52 (113)
T 3rhb_A 21 VVIYSKTWCSYCT-EVKTLFKRL-GVQPLVVELD 52 (113)
T ss_dssp EEEEECTTCHHHH-HHHHHHHHT-TCCCEEEEGG
T ss_pred EEEEECCCChhHH-HHHHHHHHc-CCCCeEEEee
Confidence 6666677999998 567889886 7764444443
No 61
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=36.77 E-value=62 Score=20.05 Aligned_cols=25 Identities=28% Similarity=0.550 Sum_probs=18.6
Q ss_pred EEEEecccChhHHHHHHHHHhcCCCce
Q 033120 49 VVLSADIRCSECQKRVADMMSKLNETE 75 (126)
Q Consensus 49 VvLkvgMsC~hC~krVkkaLskL~GVe 75 (126)
|++-..-.|.+|.+ ++..|.++ |++
T Consensus 14 v~~f~~~~C~~C~~-~~~~L~~~-~~~ 38 (105)
T 1kte_A 14 VVVFIKPTCPFCRK-TQELLSQL-PFK 38 (105)
T ss_dssp EEEEECSSCHHHHH-HHHHHHHS-CBC
T ss_pred EEEEEcCCCHhHHH-HHHHHHHc-CCC
Confidence 55666789999975 67888886 554
No 62
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=35.82 E-value=36 Score=21.86 Aligned_cols=24 Identities=17% Similarity=0.303 Sum_probs=20.0
Q ss_pred cCCCc--eEEEEeccCCEEEEEeecC
Q 033120 70 KLNET--ESVLVNVSEKKVTLTSRYP 93 (126)
Q Consensus 70 kL~GV--esV~VDLe~KkVtVtg~~~ 93 (126)
.++|+ ++++|.++++.++|.|.-.
T Consensus 14 dlPG~~~edi~V~v~~~~L~I~g~~~ 39 (85)
T 3q9p_A 14 DVNHFAPDELTVKTKDGVVEITGKHA 39 (85)
T ss_dssp ECTTTCCSEEEEEEETTEEEEEEEEC
T ss_pred ECCCCChHHEEEEEECCEEEEEEEEc
Confidence 35676 7899999999999999854
No 63
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=35.15 E-value=53 Score=21.47 Aligned_cols=33 Identities=24% Similarity=0.468 Sum_probs=23.5
Q ss_pred EEEEEecccChhHHHHHHHHHhcCCCceEEEEecc
Q 033120 48 EVVLSADIRCSECQKRVADMMSKLNETESVLVNVS 82 (126)
Q Consensus 48 ~VvLkvgMsC~hC~krVkkaLskL~GVesV~VDLe 82 (126)
.|++-..-.|.+|. ++++.|.++ ||.=-.+|+.
T Consensus 18 ~v~vy~~~~Cp~C~-~ak~~L~~~-~i~~~~~dvd 50 (114)
T 3h8q_A 18 RVVIFSKSYCPHST-RVKELFSSL-GVECNVLELD 50 (114)
T ss_dssp SEEEEECTTCHHHH-HHHHHHHHT-TCCCEEEETT
T ss_pred CEEEEEcCCCCcHH-HHHHHHHHc-CCCcEEEEec
Confidence 46666667999996 568889886 7765445554
No 64
>2kgs_A Uncharacterized protein RV0899/MT0922; outer membrane protein A, BON DO cell membrane, membrane, transmembrane, membrane protein; NMR {Mycobacterium tuberculosis} PDB: 2ksm_A
Probab=33.99 E-value=16 Score=25.75 Aligned_cols=31 Identities=19% Similarity=0.186 Sum_probs=24.3
Q ss_pred HHHHhcCCCceEEEEeccCCEEEEEeecCcc
Q 033120 65 ADMMSKLNETESVLVNVSEKKVTLTSRYPVV 95 (126)
Q Consensus 65 kkaLskL~GVesV~VDLe~KkVtVtg~~~~d 95 (126)
..+|..+..+..++|.++.+.||++|.++..
T Consensus 67 ~~aL~~~~~l~~i~V~V~~g~VtLsG~v~s~ 97 (132)
T 2kgs_A 67 EPVFTASVPIPDFGLKVERDTVTLTGTAPSS 97 (132)
T ss_dssp HHHHHHHTTCTTCEEEEEETEEEEECEESSH
T ss_pred HHHHHhcCcCCceEEEEECCEEEEEEEECCH
Confidence 5566665555688999999999999997763
No 65
>1gh8_A Translation elongation factor 1BETA; alpha-beta sandwich, gene regulation, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus} SCOP: d.58.12.1
Probab=33.84 E-value=27 Score=23.79 Aligned_cols=22 Identities=9% Similarity=0.173 Sum_probs=18.9
Q ss_pred hHHHHHHHHHhcCCCceEEEEe
Q 033120 59 ECQKRVADMMSKLNETESVLVN 80 (126)
Q Consensus 59 hC~krVkkaLskL~GVesV~VD 80 (126)
+=...+++++++++||+||+|-
T Consensus 62 ~~td~lee~i~~~e~Vqsvdv~ 83 (89)
T 1gh8_A 62 GGTEAAEESLSGIEGVSNIEVT 83 (89)
T ss_dssp GGGGHHHHHHTTSCSSEEEEEE
T ss_pred cChHHHHHHHhccCCccEEEEE
Confidence 4567899999999999999874
No 66
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=33.64 E-value=25 Score=23.73 Aligned_cols=25 Identities=20% Similarity=0.352 Sum_probs=15.5
Q ss_pred EEEEEecccChhHHHH---HHHHHhcCC
Q 033120 48 EVVLSADIRCSECQKR---VADMMSKLN 72 (126)
Q Consensus 48 ~VvLkvgMsC~hC~kr---VkkaLskL~ 72 (126)
+|+---+..|.||.+- +.+.+.+.+
T Consensus 24 ~vvEf~dy~Cp~C~~~~~~~~~l~~~~~ 51 (184)
T 4dvc_A 24 VVSEFFSFYCPHCNTFEPIIAQLKQQLP 51 (184)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHTSC
T ss_pred EEEEEECCCCHhHHHHhHHHHHHHhhcC
Confidence 3444569999999753 344445543
No 67
>2yy3_A Elongation factor 1-beta; structural genomics, NPPSFA, national Pro protein structural and functional analyses; 2.50A {Pyrococcus horikoshii}
Probab=33.18 E-value=26 Score=24.02 Aligned_cols=20 Identities=25% Similarity=0.325 Sum_probs=18.4
Q ss_pred HHHHHHHHhcCCCceEEEEe
Q 033120 61 QKRVADMMSKLNETESVLVN 80 (126)
Q Consensus 61 ~krVkkaLskL~GVesV~VD 80 (126)
...+++++++++||+||+|-
T Consensus 67 tD~lee~i~~~e~VqSvdV~ 86 (91)
T 2yy3_A 67 FDEVAEKFEEVENVESAEVE 86 (91)
T ss_dssp HHHHHHHHHHSTTEEEEEEE
T ss_pred cHHHHHHHhcCCCceEEEEE
Confidence 88999999999999999874
No 68
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=32.15 E-value=49 Score=19.51 Aligned_cols=34 Identities=21% Similarity=0.453 Sum_probs=21.7
Q ss_pred EEEEecccChhHHHHHHHHHhcC----CCceEEEEeccC
Q 033120 49 VVLSADIRCSECQKRVADMMSKL----NETESVLVNVSE 83 (126)
Q Consensus 49 VvLkvgMsC~hC~krVkkaLskL----~GVesV~VDLe~ 83 (126)
|++-..-.|.+|.+ ++..|.++ .|+.=..+|+.+
T Consensus 3 v~~f~~~~C~~C~~-~~~~l~~l~~~~~~i~~~~vdi~~ 40 (85)
T 1ego_A 3 TVIFGRSGCPYCVR-AKDLAEKLSNERDDFQYQYVDIRA 40 (85)
T ss_dssp EEEECCTTSTHHHH-HHHHHHHHHHHHSSCEEEEECHHH
T ss_pred EEEEeCCCCCCHHH-HHHHHHHHHhcCCCceEEEEeccc
Confidence 34444457999976 45567664 577777777643
No 69
>2kgs_A Uncharacterized protein RV0899/MT0922; outer membrane protein A, BON DO cell membrane, membrane, transmembrane, membrane protein; NMR {Mycobacterium tuberculosis} PDB: 2ksm_A
Probab=32.08 E-value=50 Score=23.16 Aligned_cols=21 Identities=24% Similarity=0.309 Sum_probs=17.5
Q ss_pred eEEEEeccCCEEEEEeecCcc
Q 033120 75 ESVLVNVSEKKVTLTSRYPVV 95 (126)
Q Consensus 75 esV~VDLe~KkVtVtg~~~~d 95 (126)
.-+.|..+.+.||++|.++..
T Consensus 8 ~~i~V~v~~G~VTLsG~Vp~~ 28 (132)
T 2kgs_A 8 SLLSISRSGNTVTLIGDFPDE 28 (132)
T ss_dssp EEEEEEECSSEEEEEEEESCH
T ss_pred eeEEEEEECCEEEEEEECCCH
Confidence 357788889999999998873
No 70
>1u6t_A SH3 domain-binding glutamic acid-rich-like protein; SH3-binding, glutaredoxin, thioredoxin fold, crystallography, protein binding; HET: CIT; 1.90A {Homo sapiens} PDB: 1wry_A
Probab=31.58 E-value=67 Score=22.67 Aligned_cols=34 Identities=3% Similarity=-0.001 Sum_probs=28.3
Q ss_pred EEEEecccChhHH-----HHHHHHHhcCCCceEEEEeccC
Q 033120 49 VVLSADIRCSECQ-----KRVADMMSKLNETESVLVNVSE 83 (126)
Q Consensus 49 VvLkvgMsC~hC~-----krVkkaLskL~GVesV~VDLe~ 83 (126)
|++-.--.|..|+ .++++.|... ||.=-++|+..
T Consensus 2 V~vYtt~~c~~c~~kk~c~~aK~lL~~k-gV~feEidI~~ 40 (121)
T 1u6t_A 2 IRVYIASSSGSTAIKKKQQDVLGFLEAN-KIGFEEKDIAA 40 (121)
T ss_dssp EEEEECTTCSCHHHHHHHHHHHHHHHHT-TCCEEEEECTT
T ss_pred EEEEecCCCCCccchHHHHHHHHHHHHC-CCceEEEECCC
Confidence 6777788999996 9999999985 99877777764
No 71
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=31.35 E-value=27 Score=25.20 Aligned_cols=23 Identities=13% Similarity=0.244 Sum_probs=17.6
Q ss_pred EEEEEecccChhHHHH---HHHHHhc
Q 033120 48 EVVLSADIRCSECQKR---VADMMSK 70 (126)
Q Consensus 48 ~VvLkvgMsC~hC~kr---VkkaLsk 70 (126)
+|+.-.+..|.||.+- +...|.+
T Consensus 17 tiv~f~D~~Cp~C~~~~~~~~~~l~~ 42 (182)
T 3gn3_A 17 LFEVFLEPTCPFSVKAFFKLDDLLAQ 42 (182)
T ss_dssp EEEEEECTTCHHHHHHHTTHHHHHHH
T ss_pred EEEEEECCCCHhHHHHHHHHHHHHHH
Confidence 7888899999999985 4444444
No 72
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=31.04 E-value=34 Score=22.69 Aligned_cols=24 Identities=21% Similarity=0.292 Sum_probs=19.6
Q ss_pred cCCCc--eEEEEeccCCEEEEEeecC
Q 033120 70 KLNET--ESVLVNVSEKKVTLTSRYP 93 (126)
Q Consensus 70 kL~GV--esV~VDLe~KkVtVtg~~~ 93 (126)
.|+|+ ++++|++.++.++|.|.-.
T Consensus 18 dlPG~~~edI~V~v~~~~L~I~g~~~ 43 (101)
T 2wj5_A 18 DVKHFSPEEISVKVVGDHVEVHARHE 43 (101)
T ss_dssp ECTTSCGGGEEEEEETTEEEEEEEEE
T ss_pred ECCCCcHHHeEEEEECCEEEEEEEEe
Confidence 35676 6799999999999999753
No 73
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=30.99 E-value=87 Score=20.20 Aligned_cols=26 Identities=19% Similarity=0.511 Sum_probs=19.0
Q ss_pred EEEEEecccChhHHHHHHHHHhcCCCce
Q 033120 48 EVVLSADIRCSECQKRVADMMSKLNETE 75 (126)
Q Consensus 48 ~VvLkvgMsC~hC~krVkkaLskL~GVe 75 (126)
.|++-..-.|..|. +++..|.++ |++
T Consensus 20 ~vv~f~~~~Cp~C~-~~~~~L~~~-~~~ 45 (114)
T 2hze_A 20 KVTIFVKYTCPFCR-NALDILNKF-SFK 45 (114)
T ss_dssp CEEEEECTTCHHHH-HHHHHHTTS-CBC
T ss_pred CEEEEEeCCChhHH-HHHHHHHHc-CCC
Confidence 35566667899997 567788886 666
No 74
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=30.36 E-value=64 Score=20.86 Aligned_cols=34 Identities=9% Similarity=0.182 Sum_probs=24.4
Q ss_pred EEEEEecccChhHHHHHHHHHhcCCCceEEEEeccC
Q 033120 48 EVVLSADIRCSECQKRVADMMSKLNETESVLVNVSE 83 (126)
Q Consensus 48 ~VvLkvgMsC~hC~krVkkaLskL~GVesV~VDLe~ 83 (126)
.|++-..-.|..|.+ +++.|.+. ||.=..+|+.+
T Consensus 17 ~v~vy~~~~Cp~C~~-ak~~L~~~-~i~y~~idI~~ 50 (99)
T 3qmx_A 17 KIEIYTWSTCPFCMR-ALALLKRK-GVEFQEYCIDG 50 (99)
T ss_dssp CEEEEECTTCHHHHH-HHHHHHHH-TCCCEEEECTT
T ss_pred CEEEEEcCCChhHHH-HHHHHHHC-CCCCEEEEcCC
Confidence 567777889999965 56788886 77655566544
No 75
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=30.20 E-value=37 Score=21.93 Aligned_cols=23 Identities=13% Similarity=0.200 Sum_probs=18.8
Q ss_pred cCCCc--eEEEEeccCCEEEEEeec
Q 033120 70 KLNET--ESVLVNVSEKKVTLTSRY 92 (126)
Q Consensus 70 kL~GV--esV~VDLe~KkVtVtg~~ 92 (126)
.|+|+ ++++|.+.++.++|+|.-
T Consensus 13 dlPG~~~edi~V~v~~~~L~I~g~~ 37 (90)
T 2y1y_A 13 DVKHFSPEELKVKVLGDVIEVHGKH 37 (90)
T ss_dssp ECTTSCGGGEEEEEETTEEEEEEEE
T ss_pred ECCCCcHHHeEEEEECCEEEEEEEE
Confidence 35676 579999999999999974
No 76
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=29.79 E-value=64 Score=21.10 Aligned_cols=33 Identities=9% Similarity=0.252 Sum_probs=25.9
Q ss_pred EEEEecccChhHHHHHHHHHhcCCCceEEEEeccC
Q 033120 49 VVLSADIRCSECQKRVADMMSKLNETESVLVNVSE 83 (126)
Q Consensus 49 VvLkvgMsC~hC~krVkkaLskL~GVesV~VDLe~ 83 (126)
|++----.|..|.+ +++.|.+. ||.=.++|+++
T Consensus 6 I~vYs~~~Cp~C~~-aK~~L~~~-gi~y~~idi~~ 38 (92)
T 2lqo_A 6 LTIYTTSWCGYCLR-LKTALTAN-RIAYDEVDIEH 38 (92)
T ss_dssp EEEEECTTCSSHHH-HHHHHHHT-TCCCEEEETTT
T ss_pred EEEEcCCCCHhHHH-HHHHHHhc-CCceEEEEcCC
Confidence 66667789999987 67888884 88877777764
No 77
>2cpq_A FragIle X mental retardation syndrome related protein 1, isoform B'; KH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.51.1.1
Probab=28.27 E-value=83 Score=21.36 Aligned_cols=29 Identities=3% Similarity=0.111 Sum_probs=21.1
Q ss_pred HHHHHHHhcCCCceEEEEeccCCEEEEEee
Q 033120 62 KRVADMMSKLNETESVLVNVSEKKVTLTSR 91 (126)
Q Consensus 62 krVkkaLskL~GVesV~VDLe~KkVtVtg~ 91 (126)
+.+++.. +..|+++++++-++++|++.|.
T Consensus 35 k~Ik~I~-e~tGv~~IdI~eddG~V~I~g~ 63 (91)
T 2cpq_A 35 SNIQQAR-KVPGVTAIELDEDTGTFRIYGE 63 (91)
T ss_dssp HHHHHHH-TSTTEEEEEEETTTTEEEEEES
T ss_pred HHHHHHH-HHhCCeEEEEEcCCCEEEEEEC
Confidence 4444444 4479988888866799999994
No 78
>3bpd_A Uncharacterized protein; heptamer, Mg+2 ION, PSI-2, NYSGXRC, structural genom protein structure initiative; 2.80A {Archaeoglobus fulgidus dsm 4304} SCOP: d.58.61.1
Probab=26.32 E-value=36 Score=24.23 Aligned_cols=30 Identities=20% Similarity=0.275 Sum_probs=23.3
Q ss_pred HHHHHHHhcCCCceEEEEec-------cCCEEEEEee
Q 033120 62 KRVADMMSKLNETESVLVNV-------SEKKVTLTSR 91 (126)
Q Consensus 62 krVkkaLskL~GVesV~VDL-------e~KkVtVtg~ 91 (126)
--+.+.|++++||+.|++.+ ++=++|++|+
T Consensus 22 vdlA~~l~~~~gV~gVnItV~EvD~eTe~lkItIEG~ 58 (100)
T 3bpd_A 22 IVFALKLSELENVDGVNIHLSEIDQATENIKITILGN 58 (100)
T ss_dssp HHHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEEE
T ss_pred HHHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEec
Confidence 45788999999999887654 3457888886
No 79
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=26.25 E-value=88 Score=20.70 Aligned_cols=27 Identities=11% Similarity=0.244 Sum_probs=19.8
Q ss_pred ccChhHHHHHHHHHhcCCCceEEEEeccC
Q 033120 55 IRCSECQKRVADMMSKLNETESVLVNVSE 83 (126)
Q Consensus 55 MsC~hC~krVkkaLskL~GVesV~VDLe~ 83 (126)
-.|..|.+. ++.|.+. ||.=.++|+.+
T Consensus 29 ~~Cp~C~~a-k~~L~~~-gi~y~~~di~~ 55 (111)
T 3zyw_A 29 PRCGFSKQM-VEILHKH-NIQFSSFDIFS 55 (111)
T ss_dssp BSSHHHHHH-HHHHHHT-TCCCEEEEGGG
T ss_pred CcchhHHHH-HHHHHHc-CCCeEEEECcC
Confidence 689999764 6788885 88765666654
No 80
>2wem_A Glutaredoxin-related protein 5; chromosome 14 open reading frame 87, Fe/S cluster, oxidoreductase, thioredoxin family, GLRX5, FLB4739, C14ORF87; HET: GTT; 2.40A {Homo sapiens} PDB: 2wul_A*
Probab=25.32 E-value=1e+02 Score=20.88 Aligned_cols=25 Identities=16% Similarity=0.212 Sum_probs=18.5
Q ss_pred cChhHHHHHHHHHhcCCCce-EEEEecc
Q 033120 56 RCSECQKRVADMMSKLNETE-SVLVNVS 82 (126)
Q Consensus 56 sC~hC~krVkkaLskL~GVe-sV~VDLe 82 (126)
.|.+|. ++++.|.+. ||. =..+|+.
T Consensus 34 ~Cp~C~-~ak~lL~~~-gv~~~~~vdV~ 59 (118)
T 2wem_A 34 QCGFSN-AVVQILRLH-GVRDYAAYNVL 59 (118)
T ss_dssp SSHHHH-HHHHHHHHT-TCCCCEEEESS
T ss_pred ccHHHH-HHHHHHHHc-CCCCCEEEEcC
Confidence 799998 578889986 884 4455554
No 81
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=24.89 E-value=66 Score=19.51 Aligned_cols=33 Identities=21% Similarity=0.489 Sum_probs=22.5
Q ss_pred EEEEEecccChhHHHHHHHHHhcCCCceEEEEecc
Q 033120 48 EVVLSADIRCSECQKRVADMMSKLNETESVLVNVS 82 (126)
Q Consensus 48 ~VvLkvgMsC~hC~krVkkaLskL~GVesV~VDLe 82 (126)
.|++--.-.|..|.+ ++..|.+. |+.=..+|+.
T Consensus 7 ~v~~y~~~~C~~C~~-~~~~L~~~-~i~~~~vdv~ 39 (89)
T 2klx_A 7 EIILYTRPNCPYCKR-ARDLLDKK-GVKYTDIDAS 39 (89)
T ss_dssp CEEEESCSCCTTTHH-HHHHHHHH-TCCEEEECSC
T ss_pred eEEEEECCCChhHHH-HHHHHHHc-CCCcEEEECC
Confidence 356666678999985 67788876 6655455543
No 82
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=24.43 E-value=1.4e+02 Score=18.92 Aligned_cols=33 Identities=12% Similarity=0.335 Sum_probs=23.1
Q ss_pred EEEEecccChhHHHHHHHHHhcC-CCceEEEEecc
Q 033120 49 VVLSADIRCSECQKRVADMMSKL-NETESVLVNVS 82 (126)
Q Consensus 49 VvLkvgMsC~hC~krVkkaLskL-~GVesV~VDLe 82 (126)
|++-..-.|..|.+ ++..|.++ .+|.=.+||++
T Consensus 19 v~~f~~~~C~~C~~-~~~~L~~l~~~i~~~~vdi~ 52 (100)
T 1wjk_A 19 LTLFTKAPCPLCDE-AKEVLQPYKDRFILQEVDIT 52 (100)
T ss_dssp EEEEECSSCHHHHH-HHHHTSTTSSSSEEEEEETT
T ss_pred EEEEeCCCCcchHH-HHHHHHHhhhCCeEEEEECC
Confidence 45555568999974 57778865 46777777776
No 83
>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A
Probab=24.34 E-value=1e+02 Score=21.48 Aligned_cols=27 Identities=7% Similarity=0.176 Sum_probs=20.6
Q ss_pred ccChhHHHHHHHHHhcCCCceEEEEeccC
Q 033120 55 IRCSECQKRVADMMSKLNETESVLVNVSE 83 (126)
Q Consensus 55 MsC~hC~krVkkaLskL~GVesV~VDLe~ 83 (126)
-.|..|.+ +++.|.++ ||.=..+|+.+
T Consensus 48 ~~Cp~C~~-ak~~L~~~-gv~y~~vdI~~ 74 (135)
T 2wci_A 48 PSCGFSAQ-AVQALAAC-GERFAYVDILQ 74 (135)
T ss_dssp BSSHHHHH-HHHHHHTT-CSCCEEEEGGG
T ss_pred CCCccHHH-HHHHHHHc-CCceEEEECCC
Confidence 58999985 78889886 88766666653
No 84
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=24.11 E-value=1.2e+02 Score=17.84 Aligned_cols=25 Identities=12% Similarity=0.198 Sum_probs=18.7
Q ss_pred EEEEecccChhHHHHHHHHHhcCCCce
Q 033120 49 VVLSADIRCSECQKRVADMMSKLNETE 75 (126)
Q Consensus 49 VvLkvgMsC~hC~krVkkaLskL~GVe 75 (126)
|+|-..-.|..|.+ ++..|.+. |++
T Consensus 6 v~ly~~~~Cp~C~~-~~~~L~~~-~i~ 30 (89)
T 3msz_A 6 VKIYTRNGCPYCVW-AKQWFEEN-NIA 30 (89)
T ss_dssp EEEEECTTCHHHHH-HHHHHHHT-TCC
T ss_pred EEEEEcCCChhHHH-HHHHHHHc-CCC
Confidence 66666779999975 67888886 643
No 85
>2x3d_A SSO6206; unknown function; 2.70A {Sulfolobus solfataricus}
Probab=24.07 E-value=42 Score=23.67 Aligned_cols=29 Identities=24% Similarity=0.343 Sum_probs=22.6
Q ss_pred HHHHHHhcCCCceEEEEec-------cCCEEEEEee
Q 033120 63 RVADMMSKLNETESVLVNV-------SEKKVTLTSR 91 (126)
Q Consensus 63 rVkkaLskL~GVesV~VDL-------e~KkVtVtg~ 91 (126)
-+.+.|++++||+.|++.+ ++=++|++|+
T Consensus 22 d~A~~l~~~~gV~gVnItv~EvD~eTe~lkItIEG~ 57 (96)
T 2x3d_A 22 DLAERISKLDGVEGVNISVTDMDVETMGLMIIIEGT 57 (96)
T ss_dssp HHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEES
T ss_pred HHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEec
Confidence 4678999999999887654 3457888886
No 86
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=23.49 E-value=1.3e+02 Score=18.10 Aligned_cols=37 Identities=24% Similarity=0.379 Sum_probs=23.5
Q ss_pred EEEEEecccChhHHH---HHHHHHhcCCC-ceEEEEeccCC
Q 033120 48 EVVLSADIRCSECQK---RVADMMSKLNE-TESVLVNVSEK 84 (126)
Q Consensus 48 ~VvLkvgMsC~hC~k---rVkkaLskL~G-VesV~VDLe~K 84 (126)
.++.--.-.|.+|.. .+.+...+.+| +.=+.||.++.
T Consensus 25 vlv~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~ 65 (111)
T 3gnj_A 25 CLVMFSRKNCHVCQKVTPVLEELRLNYEESFGFYYVDVEEE 65 (111)
T ss_dssp EEEEEECSSCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTC
T ss_pred EEEEEeCCCChhHHHHHHHHHHHHHHcCCceEEEEEECCcC
Confidence 344444568999987 44555556664 77777777643
No 87
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=23.37 E-value=44 Score=21.57 Aligned_cols=24 Identities=8% Similarity=0.140 Sum_probs=19.3
Q ss_pred CCCc--eEEEEeccCCEEEEEeecCc
Q 033120 71 LNET--ESVLVNVSEKKVTLTSRYPV 94 (126)
Q Consensus 71 L~GV--esV~VDLe~KkVtVtg~~~~ 94 (126)
|+|+ ++++|++.++.++|.|....
T Consensus 22 lPG~~~edi~v~~~~~~L~I~g~~~~ 47 (100)
T 3gla_A 22 LPGIDPSQIEVQMDKGILSIRGERKS 47 (100)
T ss_dssp CTTSCGGGCEEEEETTEEEEEEEECC
T ss_pred CCCCCHHHEEEEEECCEEEEEEEEcC
Confidence 4665 67899999999999997543
No 88
>2joi_A Hypothetical protein TA0095; structural genomics, COG4004 orthologous group, structural genomics consortium, SGC, unknown function; NMR {Thermoplasma acidophilum}
Probab=23.15 E-value=43 Score=24.45 Aligned_cols=55 Identities=7% Similarity=0.092 Sum_probs=35.2
Q ss_pred eeeEEEEEecccChhHHHHHHHHHhcC---------------CCceEEEEeccCCEEEEEeecCcchhhhhhhh
Q 033120 45 LVQEVVLSADIRCSECQKRVADMMSKL---------------NETESVLVNVSEKKVTLTSRYPVVVEVSKRQI 103 (126)
Q Consensus 45 ~~Q~VvLkvgMsC~hC~krVkkaLskL---------------~GVesV~VDLe~KkVtVtg~~~~d~kV~~~qI 103 (126)
.+|+..++-|..=+- .++.+.|++. .+++.++|-+++|+..|+...+. .+.++++
T Consensus 22 ~MqeY~~KRG~k~~l--erI~~~l~e~Fg~~~~~g~~~~~SyGal~~i~vwie~KkL~VeT~sd~--~~~de~~ 91 (118)
T 2joi_A 22 HMREYPVKKGFPTDY--DSIKRKISELGFDVKSEGDLIIASIPGISRIEIKPDKRKILVNTGDYD--SDADKLA 91 (118)
T ss_dssp -CEEECCCSSSCCSH--HHHHHHHHHHTCEEEEETTEEEEECTTBSCEEEEECSSCEEEEECCBC--TTSCHHH
T ss_pred hhhccccccCCCCcH--HHHHHHHHHHcCCceecCCEEEEEecceeEEEEEECCeEEEEEeccCC--CCChHHH
Confidence 456666665555443 5555555543 45788899999999999998544 2344444
No 89
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=22.87 E-value=44 Score=22.65 Aligned_cols=25 Identities=16% Similarity=0.259 Sum_probs=20.1
Q ss_pred cCCCc--eEEEEeccC-CEEEEEeecCc
Q 033120 70 KLNET--ESVLVNVSE-KKVTLTSRYPV 94 (126)
Q Consensus 70 kL~GV--esV~VDLe~-KkVtVtg~~~~ 94 (126)
.|||+ ++++|.+.+ +.++|+|....
T Consensus 41 ~lPG~~~edi~V~v~~~~~L~I~g~~~~ 68 (123)
T 3aab_A 41 DLAGFNKEKIKARVSGQNELIIEAEREI 68 (123)
T ss_dssp ECCSCCGGGCEEEEETTTEEEEEEECCC
T ss_pred ECCCCCHHHEEEEEeCCCEEEEEEEEec
Confidence 45776 679999999 99999998543
No 90
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=22.78 E-value=1.1e+02 Score=19.81 Aligned_cols=25 Identities=20% Similarity=0.291 Sum_probs=18.8
Q ss_pred cChhHHHHHHHHHhcCCCceEEEEecc
Q 033120 56 RCSECQKRVADMMSKLNETESVLVNVS 82 (126)
Q Consensus 56 sC~hC~krVkkaLskL~GVesV~VDLe 82 (126)
.|..|.+ +++.|.+. ||.=..+|+.
T Consensus 32 ~Cp~C~~-ak~~L~~~-gi~~~~~dI~ 56 (109)
T 3ipz_A 32 MCGFSNT-VVQILKNL-NVPFEDVNIL 56 (109)
T ss_dssp SSHHHHH-HHHHHHHT-TCCCEEEEGG
T ss_pred CChhHHH-HHHHHHHc-CCCcEEEECC
Confidence 7999965 67788886 8876666665
No 91
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=22.52 E-value=46 Score=21.85 Aligned_cols=23 Identities=4% Similarity=0.121 Sum_probs=18.7
Q ss_pred cCCCc--eEEEEeccCCEEEEEeec
Q 033120 70 KLNET--ESVLVNVSEKKVTLTSRY 92 (126)
Q Consensus 70 kL~GV--esV~VDLe~KkVtVtg~~ 92 (126)
.|+|+ ++++|.++++.++|+|..
T Consensus 23 ~lPG~~~edi~v~~~~~~L~I~g~~ 47 (102)
T 4fei_A 23 DVPGVDAGTLALAEDGGQLTVSGER 47 (102)
T ss_dssp ECTTCCGGGCEEEEETTEEEEEEEE
T ss_pred ECCCCchHhEEEEEECCEEEEEEEE
Confidence 35675 688999999999998864
No 92
>2raq_A Conserved protein MTH889; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 3.11A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: d.58.61.1
Probab=22.46 E-value=43 Score=23.67 Aligned_cols=29 Identities=28% Similarity=0.382 Sum_probs=22.2
Q ss_pred HHHHHHhcCCCceEEEEec-------cCCEEEEEee
Q 033120 63 RVADMMSKLNETESVLVNV-------SEKKVTLTSR 91 (126)
Q Consensus 63 rVkkaLskL~GVesV~VDL-------e~KkVtVtg~ 91 (126)
-+.+.|++++||+.|++.+ ++=++|++|+
T Consensus 23 d~A~~l~~~~gV~gVnItv~EvD~eTe~lkitiEG~ 58 (97)
T 2raq_A 23 EYAKYLSELRGVEGVNITLMEIDKETENIKVTIQGN 58 (97)
T ss_dssp HHHHHHHHSTTCCEEEEEEEEECSSCEEEEEEEECS
T ss_pred HHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEec
Confidence 4678999999999887654 3447788886
No 93
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=22.22 E-value=61 Score=21.65 Aligned_cols=22 Identities=23% Similarity=0.315 Sum_probs=18.6
Q ss_pred CCCc--eEEEEeccCCEEEEEeec
Q 033120 71 LNET--ESVLVNVSEKKVTLTSRY 92 (126)
Q Consensus 71 L~GV--esV~VDLe~KkVtVtg~~ 92 (126)
|+|+ ++++|.+.++.++|.|.-
T Consensus 20 lPG~~~edi~V~v~~~~L~I~g~~ 43 (106)
T 3l1e_A 20 VKHFSPEDLTVKVQEDFVEIHGKH 43 (106)
T ss_dssp CTTSCGGGEEEEEETTEEEEEEEE
T ss_pred CCCCChHHEEEEEECCEEEEEEEE
Confidence 4665 789999999999999964
No 94
>1f60_B Elongation factor EEF1BA; protein-protein complex, translation; 1.67A {Saccharomyces cerevisiae} SCOP: d.58.12.1 PDB: 1g7c_B* 2b7c_B 2b7b_B 1ije_B* 1ijf_B*
Probab=22.10 E-value=63 Score=22.18 Aligned_cols=22 Identities=5% Similarity=0.065 Sum_probs=19.1
Q ss_pred hHHHHHHHHHhcCCC-ceEEEEe
Q 033120 59 ECQKRVADMMSKLNE-TESVLVN 80 (126)
Q Consensus 59 hC~krVkkaLskL~G-VesV~VD 80 (126)
+=...+++.+++++| |+|++|-
T Consensus 67 ~~tD~lee~i~~~ed~VqSvdI~ 89 (94)
T 1f60_B 67 VSLDDLQQSIEEDEDHVQSTDIA 89 (94)
T ss_dssp CCHHHHHHHHHTCTTTEEEEEEE
T ss_pred cChHHHHHHHHhccCceeEEEEE
Confidence 457899999999999 9999874
No 95
>1qys_A TOP7; alpha-beta, novel fold, de novo protein; 2.50A {Computationally designed sequence} SCOP: k.41.1.1
Probab=21.99 E-value=1.7e+02 Score=20.53 Aligned_cols=33 Identities=12% Similarity=0.172 Sum_probs=25.8
Q ss_pred HHHHHHHHhcCCCceEEEEeccCCEEEEEeecCc
Q 033120 61 QKRVADMMSKLNETESVLVNVSEKKVTLTSRYPV 94 (126)
Q Consensus 61 ~krVkkaLskL~GVesV~VDLe~KkVtVtg~~~~ 94 (126)
+.-.-+++.++ |-.++.|..+...|||+|....
T Consensus 64 aailikvfael-gyndinvtfdgdtvtvegqleg 96 (106)
T 1qys_A 64 AAILIKVFAEL-GYNDINVTFDGDTVTVEGQLEG 96 (106)
T ss_dssp HHHHHHHHHHT-TCCEEEEEEETTEEEEEEEC--
T ss_pred HHHHHHHHHHh-CCcceeEEEcCCeEEEEeEEcC
Confidence 34455667777 9999999999999999998654
No 96
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=21.50 E-value=90 Score=20.87 Aligned_cols=33 Identities=18% Similarity=0.405 Sum_probs=22.4
Q ss_pred EEEEEecccChhHHHHHHHHHhcCCCceEEEEecc
Q 033120 48 EVVLSADIRCSECQKRVADMMSKLNETESVLVNVS 82 (126)
Q Consensus 48 ~VvLkvgMsC~hC~krVkkaLskL~GVesV~VDLe 82 (126)
.|++-..-.|.+|.+ ++..|.++ |+.=..+|+.
T Consensus 28 ~vvvf~~~~Cp~C~~-~~~~L~~~-~i~~~~vdid 60 (130)
T 2cq9_A 28 CVVIFSKTSCSYCTM-AKKLFHDM-NVNYKVVELD 60 (130)
T ss_dssp SEEEEECSSCSHHHH-HHHHHHHH-TCCCEEEETT
T ss_pred cEEEEEcCCChHHHH-HHHHHHHc-CCCcEEEECc
Confidence 366667789999975 67788876 6654444443
No 97
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=21.24 E-value=1.6e+02 Score=18.45 Aligned_cols=33 Identities=12% Similarity=0.138 Sum_probs=22.4
Q ss_pred EecccChhHHH---HHHHHHhcCCCceEEEEeccCC
Q 033120 52 SADIRCSECQK---RVADMMSKLNETESVLVNVSEK 84 (126)
Q Consensus 52 kvgMsC~hC~k---rVkkaLskL~GVesV~VDLe~K 84 (126)
--.-.|.+|.. .+.+...+.++|.=+.||.++.
T Consensus 38 F~a~wC~~C~~~~p~l~~l~~~~~~v~~~~vd~d~~ 73 (116)
T 3qfa_C 38 FSATWCGPSKMIKPFFHSLSEKYSNVIFLEVDVDDC 73 (116)
T ss_dssp EECTTCHHHHHHHHHHHHHHTTCTTSEEEEEETTTT
T ss_pred EECCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCC
Confidence 34457999986 4455555667788888887653
No 98
>1b64_A Elongation factor 1-beta; guanine nucleotide exchange factor, G-protein, translation elongation; NMR {Homo sapiens} SCOP: d.58.12.1
Probab=21.22 E-value=66 Score=21.92 Aligned_cols=23 Identities=9% Similarity=0.180 Sum_probs=19.5
Q ss_pred hHHHHHHHHHhcCCC-ceEEEEec
Q 033120 59 ECQKRVADMMSKLNE-TESVLVNV 81 (126)
Q Consensus 59 hC~krVkkaLskL~G-VesV~VDL 81 (126)
+=...+++.+++++| |+|++|--
T Consensus 64 v~tD~lee~i~~~ed~VqSvdI~~ 87 (91)
T 1b64_A 64 VGTDMLEEQITAFEDYVQSMDVAA 87 (91)
T ss_dssp SCHHHHHHHHTTCTTTEEEEEESC
T ss_pred cChHHHHHHHHhccCceeEEEEEE
Confidence 457899999999999 99998853
No 99
>1z3e_A Regulatory protein SPX; bacterial transcription regulation, disulfide stress; 1.50A {Bacillus subtilis} SCOP: c.47.1.12 PDB: 3gfk_A 3ihq_A
Probab=20.96 E-value=1.6e+02 Score=19.91 Aligned_cols=34 Identities=21% Similarity=0.364 Sum_probs=24.9
Q ss_pred EEEEecccChhHHHHHHHHHhcCCCceEEEEeccCC
Q 033120 49 VVLSADIRCSECQKRVADMMSKLNETESVLVNVSEK 84 (126)
Q Consensus 49 VvLkvgMsC~hC~krVkkaLskL~GVesV~VDLe~K 84 (126)
|+|-..-.|..|. ++++.|.+. ||+=..+|+.+.
T Consensus 3 i~lY~~~~C~~C~-ka~~~L~~~-gi~y~~~di~~~ 36 (132)
T 1z3e_A 3 VTLYTSPSCTSCR-KARAWLEEH-EIPFVERNIFSE 36 (132)
T ss_dssp EEEEECTTCHHHH-HHHHHHHHT-TCCEEEEETTTS
T ss_pred EEEEeCCCChHHH-HHHHHHHHc-CCceEEEEccCC
Confidence 5566677999996 477888884 887666676653
No 100
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=20.87 E-value=56 Score=23.66 Aligned_cols=18 Identities=28% Similarity=0.460 Sum_probs=14.5
Q ss_pred eEEEEEecccChhHHHHH
Q 033120 47 QEVVLSADIRCSECQKRV 64 (126)
Q Consensus 47 Q~VvLkvgMsC~hC~krV 64 (126)
-+|+.-.+..|.||.+--
T Consensus 31 vtvvef~D~~CP~C~~~~ 48 (202)
T 3gha_A 31 VTVVEFGDYKCPSCKVFN 48 (202)
T ss_dssp EEEEEEECTTCHHHHHHH
T ss_pred EEEEEEECCCChhHHHHH
Confidence 367788899999998753
No 101
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=20.66 E-value=1.4e+02 Score=17.41 Aligned_cols=37 Identities=16% Similarity=0.177 Sum_probs=24.2
Q ss_pred EEEEEecccChhHHHH---HHHHHhcCCCceEEEEeccCC
Q 033120 48 EVVLSADIRCSECQKR---VADMMSKLNETESVLVNVSEK 84 (126)
Q Consensus 48 ~VvLkvgMsC~hC~kr---VkkaLskL~GVesV~VDLe~K 84 (126)
.++.--.-.|.+|..- +++.....+|+.=+.||.++.
T Consensus 19 ~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~v~~~~~ 58 (104)
T 2e0q_A 19 AVVDFWAEWCAPCLILAPIIEELAEDYPQVGFGKLNSDEN 58 (104)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEETTTC
T ss_pred EEEEEECCCChhHHHHhHHHHHHHHHcCCceEEEEECCCC
Confidence 3444456789999864 345555666788888877643
No 102
>2ko1_A CTR148A, GTP pyrophosphokinase; homodimer, alpha+beta, transferase, structural genomics, PSI-2, protein structure initiative; NMR {Chlorobaculum tepidum} PDB: 3ibw_A
Probab=20.16 E-value=1.5e+02 Score=17.68 Aligned_cols=33 Identities=12% Similarity=0.045 Sum_probs=23.0
Q ss_pred eEEEEEecccChhHHHHHHHHHhcCCCceEEEE
Q 033120 47 QEVVLSADIRCSECQKRVADMMSKLNETESVLV 79 (126)
Q Consensus 47 Q~VvLkvgMsC~hC~krVkkaLskL~GVesV~V 79 (126)
..+++.....=..-...+.+.|.+++||.+|..
T Consensus 45 ~~~~i~v~~~~~~~l~~l~~~L~~~~~V~~v~~ 77 (88)
T 2ko1_A 45 FTCNLMIFVKNTDKLTTLMDKLRKVQGVFTVER 77 (88)
T ss_dssp EEEEEEEEESSHHHHHHHHHHHTTCTTEEEEEE
T ss_pred EEEEEEEEECCHHHHHHHHHHHhcCCCceEEEE
Confidence 345555555444455788899999999998754
Done!