BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033121
(126 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3H9A|A Chain A, Crystal Structure Of Bacb, An Enzyme Involved In Bacilysin
Synthesis, In Triclinic Form
pdb|3H9A|B Chain B, Crystal Structure Of Bacb, An Enzyme Involved In Bacilysin
Synthesis, In Triclinic Form
Length = 243
Score = 28.9 bits (63), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 14/57 (24%), Positives = 27/57 (47%), Gaps = 6/57 (10%)
Query: 46 GKDPFRPDQKTQVKNLFLAGSYTKQDYIDIMEGASLSGRQASAYICNAREELVALRK 102
G+ PF + Q+ + + G Y +EG ++ + +AY C RE+ A+ +
Sbjct: 157 GEXPFHKHRNEQI-GICIGGGYDX-----TVEGCTVEXKFGTAYFCEPREDHGAINR 207
>pdb|1OQ4|A Chain A, The Crystal Structure Of The Complex Between Stearoyl Acyl
Carrier Protein Desaturase From Ricinus Communis (Castor
Bean) And Azide.
pdb|1OQ4|B Chain B, The Crystal Structure Of The Complex Between Stearoyl Acyl
Carrier Protein Desaturase From Ricinus Communis (Castor
Bean) And Azide.
pdb|1OQ4|C Chain C, The Crystal Structure Of The Complex Between Stearoyl Acyl
Carrier Protein Desaturase From Ricinus Communis (Castor
Bean) And Azide.
pdb|1OQ4|D Chain D, The Crystal Structure Of The Complex Between Stearoyl Acyl
Carrier Protein Desaturase From Ricinus Communis (Castor
Bean) And Azide.
pdb|1OQ4|E Chain E, The Crystal Structure Of The Complex Between Stearoyl Acyl
Carrier Protein Desaturase From Ricinus Communis (Castor
Bean) And Azide.
pdb|1OQ4|F Chain F, The Crystal Structure Of The Complex Between Stearoyl Acyl
Carrier Protein Desaturase From Ricinus Communis (Castor
Bean) And Azide.
pdb|1OQ7|A Chain A, The Crystal Structure Of The Iron Free (apo-)form Of
Stearoyl Acyl Carrier Protein Desaturase From Ricinus
Communis (castor Bean).
pdb|1OQ7|B Chain B, The Crystal Structure Of The Iron Free (apo-)form Of
Stearoyl Acyl Carrier Protein Desaturase From Ricinus
Communis (castor Bean).
pdb|1OQ7|C Chain C, The Crystal Structure Of The Iron Free (apo-)form Of
Stearoyl Acyl Carrier Protein Desaturase From Ricinus
Communis (castor Bean).
pdb|1OQ7|D Chain D, The Crystal Structure Of The Iron Free (apo-)form Of
Stearoyl Acyl Carrier Protein Desaturase From Ricinus
Communis (castor Bean).
pdb|1OQ7|E Chain E, The Crystal Structure Of The Iron Free (apo-)form Of
Stearoyl Acyl Carrier Protein Desaturase From Ricinus
Communis (castor Bean).
pdb|1OQ7|F Chain F, The Crystal Structure Of The Iron Free (apo-)form Of
Stearoyl Acyl Carrier Protein Desaturase From Ricinus
Communis (castor Bean).
pdb|1OQ9|A Chain A, The Crystal Structure Of The Complex Between Stearoyl Acyl
Carrier Protein Desaturase From Ricinus Communis (Castor
Bean) And Acetate.
pdb|1OQB|A Chain A, The Crystal Structure Of The One-iron Form Of The Di-iron
Center In Stearoyl Acyl Carrier Protein Desaturase From
Ricinus Communis (castor Bean).
pdb|1OQB|B Chain B, The Crystal Structure Of The One-iron Form Of The Di-iron
Center In Stearoyl Acyl Carrier Protein Desaturase From
Ricinus Communis (castor Bean).
pdb|1OQB|C Chain C, The Crystal Structure Of The One-iron Form Of The Di-iron
Center In Stearoyl Acyl Carrier Protein Desaturase From
Ricinus Communis (castor Bean).
pdb|1OQB|D Chain D, The Crystal Structure Of The One-iron Form Of The Di-iron
Center In Stearoyl Acyl Carrier Protein Desaturase From
Ricinus Communis (castor Bean).
pdb|1OQB|E Chain E, The Crystal Structure Of The One-iron Form Of The Di-iron
Center In Stearoyl Acyl Carrier Protein Desaturase From
Ricinus Communis (castor Bean).
pdb|1OQB|F Chain F, The Crystal Structure Of The One-iron Form Of The Di-iron
Center In Stearoyl Acyl Carrier Protein Desaturase From
Ricinus Communis (castor Bean).
pdb|2XZ0|A Chain A, The Structure Of The 2:1 (Partially Occupied) Complex
Between Stearoyl Acyl Carrier Protein Desaturase From
Ricinus Communis (Castor Bean) And Acyl Carrier Protein.
pdb|2XZ0|B Chain B, The Structure Of The 2:1 (Partially Occupied) Complex
Between Stearoyl Acyl Carrier Protein Desaturase From
Ricinus Communis (Castor Bean) And Acyl Carrier Protein.
pdb|2XZ0|C Chain C, The Structure Of The 2:1 (Partially Occupied) Complex
Between Stearoyl Acyl Carrier Protein Desaturase From
Ricinus Communis (Castor Bean) And Acyl Carrier Protein.
pdb|2XZ1|A Chain A, The Structure Of The 2:2 (Fully Occupied) Complex Between
Stearoyl Acyl Carrier Protein Desaturase From Ricinus
Communis (Castor Bean) And Acyl Carrier Protein.
pdb|2XZ1|B Chain B, The Structure Of The 2:2 (Fully Occupied) Complex Between
Stearoyl Acyl Carrier Protein Desaturase From Ricinus
Communis (Castor Bean) And Acyl Carrier Protein
Length = 363
Score = 28.1 bits (61), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 12/39 (30%)
Query: 65 GSYTKQDYIDIME------------GASLSGRQASAYIC 91
G YT +DY DI+E G S G++A Y+C
Sbjct: 290 GVYTAKDYADILEFLVGRWKVDKLTGLSAEGQKAQDYVC 328
>pdb|2J2F|A Chain A, The T199d Mutant Of Stearoyl Acyl Carrier Protein
Desaturase From Ricinus Communis (Castor Bean)
pdb|2J2F|B Chain B, The T199d Mutant Of Stearoyl Acyl Carrier Protein
Desaturase From Ricinus Communis (Castor Bean)
pdb|2J2F|C Chain C, The T199d Mutant Of Stearoyl Acyl Carrier Protein
Desaturase From Ricinus Communis (Castor Bean)
pdb|2J2F|D Chain D, The T199d Mutant Of Stearoyl Acyl Carrier Protein
Desaturase From Ricinus Communis (Castor Bean)
pdb|2J2F|E Chain E, The T199d Mutant Of Stearoyl Acyl Carrier Protein
Desaturase From Ricinus Communis (Castor Bean)
pdb|2J2F|F Chain F, The T199d Mutant Of Stearoyl Acyl Carrier Protein
Desaturase From Ricinus Communis (Castor Bean)
Length = 363
Score = 28.1 bits (61), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 12/39 (30%)
Query: 65 GSYTKQDYIDIME------------GASLSGRQASAYIC 91
G YT +DY DI+E G S G++A Y+C
Sbjct: 290 GVYTAKDYADILEFLVGRWKVDKLTGLSAEGQKAQDYVC 328
>pdb|1AFR|A Chain A, Stearoyl-Acyl Carrier Protein Desaturase From Castor Seeds
pdb|1AFR|B Chain B, Stearoyl-Acyl Carrier Protein Desaturase From Castor Seeds
pdb|1AFR|C Chain C, Stearoyl-Acyl Carrier Protein Desaturase From Castor Seeds
pdb|1AFR|D Chain D, Stearoyl-Acyl Carrier Protein Desaturase From Castor Seeds
pdb|1AFR|E Chain E, Stearoyl-Acyl Carrier Protein Desaturase From Castor Seeds
pdb|1AFR|F Chain F, Stearoyl-Acyl Carrier Protein Desaturase From Castor Seeds
Length = 345
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 12/39 (30%)
Query: 65 GSYTKQDYIDIME------------GASLSGRQASAYIC 91
G YT +DY DI+E G S G++A Y+C
Sbjct: 272 GVYTAKDYADILEFLVGRWKVDKLTGLSAEGQKAQDYVC 310
>pdb|2UW1|B Chain B, Ivy Desaturase Structure
Length = 338
Score = 26.9 bits (58), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 12/39 (30%)
Query: 65 GSYTKQDYIDIME------------GASLSGRQASAYIC 91
G Y+ DY DI+E G S GR+A Y+C
Sbjct: 265 GVYSALDYCDILEFLVDKWNVERLTGLSDEGRKAQEYVC 303
>pdb|2UW1|A Chain A, Ivy Desaturase Structure
Length = 338
Score = 26.9 bits (58), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 12/39 (30%)
Query: 65 GSYTKQDYIDIME------------GASLSGRQASAYIC 91
G Y+ DY DI+E G S GR+A Y+C
Sbjct: 265 GVYSALDYCDILEFLVDKWNVERLTGLSDEGRKAQEYVC 303
>pdb|1O5W|A Chain A, The Structure Basis Of Specific Recognitions For
Substrates And Inhibitors Of Rat Monoamine Oxidase A
pdb|1O5W|B Chain B, The Structure Basis Of Specific Recognitions For
Substrates And Inhibitors Of Rat Monoamine Oxidase A
pdb|1O5W|C Chain C, The Structure Basis Of Specific Recognitions For
Substrates And Inhibitors Of Rat Monoamine Oxidase A
pdb|1O5W|D Chain D, The Structure Basis Of Specific Recognitions For
Substrates And Inhibitors Of Rat Monoamine Oxidase A
Length = 534
Score = 26.9 bits (58), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Query: 58 VKNLFLAGSYTKQDYIDIMEGASLSGRQASAYICNAREELVALRKQLAAFESQEQMEVP 116
V ++ AG+ T + MEGA +G +A+ + NA L + K+ E E +VP
Sbjct: 435 VGRIYFAGTETATQWSGYMEGAVEAGERAAREVLNA---LGKVAKKDIWVEEPESKDVP 490
>pdb|2C75|A Chain A, Functional Role Of The Aromatic Cage In Human Monoamine
Oxidase B: Structures And Catalytic Properties Of Tyr435
Mutant Proteins
pdb|2C75|B Chain B, Functional Role Of The Aromatic Cage In Human Monoamine
Oxidase B: Structures And Catalytic Properties Of Tyr435
Mutant Proteins
Length = 520
Score = 26.6 bits (57), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 42/99 (42%), Gaps = 8/99 (8%)
Query: 3 LPNDEIIRRVAKQVLALFPSSQGLEVIWSSVVKIGQSLYHEGPGKDPFRPDQKTQ----- 57
L +E ++++ + + S + LE + + Y G F P TQ
Sbjct: 355 LTKEERLKKLCELYAKVLGSLEALEPVHYEEKNWCEEQYSGGCYTTYFPPGILTQYGRVL 414
Query: 58 ---VKNLFLAGSYTKQDYIDIMEGASLSGRQASAYICNA 93
V ++ AG+ T + +MEGA +G +A+ I +A
Sbjct: 415 RQPVDRIYFAGTETATHWSGLMEGAVEAGERAAREILHA 453
>pdb|2C73|A Chain A, Functional Role Of The Aromatic Cage In Human Monoamine
Oxidase B: Structures And Catalytic Properties Of Tyr435
Mutant Proteins
pdb|2C73|B Chain B, Functional Role Of The Aromatic Cage In Human Monoamine
Oxidase B: Structures And Catalytic Properties Of Tyr435
Mutant Proteins
Length = 520
Score = 26.2 bits (56), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 41/99 (41%), Gaps = 8/99 (8%)
Query: 3 LPNDEIIRRVAKQVLALFPSSQGLEVIWSSVVKIGQSLYHEGPGKDPFRPDQKTQ----- 57
L +E ++++ + + S + LE + + Y G F P TQ
Sbjct: 355 LTKEERLKKLCELYAKVLGSLEALEPVHYEEKNWCEEQYSGGCYTTYFPPGILTQYGRVL 414
Query: 58 ---VKNLFLAGSYTKQDYIDIMEGASLSGRQASAYICNA 93
V ++ AG+ T + MEGA +G +A+ I +A
Sbjct: 415 RQPVDRIYFAGTETATHWSGFMEGAVEAGERAAREILHA 453
>pdb|2BK4|A Chain A, Human Monoamine Oxidase B: I199f Mutant In Complex With
Rasagiline
pdb|2BK4|B Chain B, Human Monoamine Oxidase B: I199f Mutant In Complex With
Rasagiline
pdb|2BK5|A Chain A, Human Monoamine Oxidase B: I199f Mutant In Complex With
Isatin
pdb|2BK5|B Chain B, Human Monoamine Oxidase B: I199f Mutant In Complex With
Isatin
Length = 520
Score = 25.8 bits (55), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 41/99 (41%), Gaps = 8/99 (8%)
Query: 3 LPNDEIIRRVAKQVLALFPSSQGLEVIWSSVVKIGQSLYHEGPGKDPFRPDQKTQ----- 57
L +E ++++ + + S + LE + + Y G F P TQ
Sbjct: 355 LTKEERLKKLCELYAKVLGSLEALEPVHYEEKNWCEEQYSGGCYTTYFPPGILTQYGRVL 414
Query: 58 ---VKNLFLAGSYTKQDYIDIMEGASLSGRQASAYICNA 93
V ++ AG+ T + MEGA +G +A+ I +A
Sbjct: 415 RQPVDRIYFAGTETATHWSGYMEGAVEAGERAAREILHA 453
>pdb|2XFU|A Chain A, Human Monoamine Oxidase B With Tranylcypromine
pdb|2XFU|B Chain B, Human Monoamine Oxidase B With Tranylcypromine
Length = 519
Score = 25.4 bits (54), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 41/99 (41%), Gaps = 8/99 (8%)
Query: 3 LPNDEIIRRVAKQVLALFPSSQGLEVIWSSVVKIGQSLYHEGPGKDPFRPDQKTQ----- 57
L +E ++++ + + S + LE + + Y G F P TQ
Sbjct: 354 LTKEERLKKLCELYAKVLGSLEALEPVHYEEKNWCEEQYSGGCYTTYFPPGILTQYGRVL 413
Query: 58 ---VKNLFLAGSYTKQDYIDIMEGASLSGRQASAYICNA 93
V ++ AG+ T + MEGA +G +A+ I +A
Sbjct: 414 RQPVDRIYFAGTETATHWSGYMEGAVEAGERAAREILHA 452
>pdb|1GOS|A Chain A, Human Monoamine Oxidase B
pdb|1GOS|B Chain B, Human Monoamine Oxidase B
pdb|1OJ9|A Chain A, Human Monoamine Oxidase B In Complex With
1,4-Diphenyl-2-Butene
pdb|1OJ9|B Chain B, Human Monoamine Oxidase B In Complex With
1,4-Diphenyl-2-Butene
pdb|1OJA|A Chain A, Human Monoamine Oxidase B In Complex With Isatin
pdb|1OJA|B Chain B, Human Monoamine Oxidase B In Complex With Isatin
pdb|1OJC|A Chain A, Human Monoamine Oxidase B In Complex With
N-(2-Aminoethyl)-P-Chlorobenzamide
pdb|1OJC|B Chain B, Human Monoamine Oxidase B In Complex With
N-(2-Aminoethyl)-P-Chlorobenzamide
pdb|1OJD|A Chain A, Human Monoamine Oxidase B In Complex With
Lauryldimethylamine-N-Oxide (Ldao)
pdb|1OJD|B Chain B, Human Monoamine Oxidase B In Complex With
Lauryldimethylamine-N-Oxide (Ldao)
pdb|1OJD|C Chain C, Human Monoamine Oxidase B In Complex With
Lauryldimethylamine-N-Oxide (Ldao)
pdb|1OJD|D Chain D, Human Monoamine Oxidase B In Complex With
Lauryldimethylamine-N-Oxide (Ldao)
pdb|1OJD|E Chain E, Human Monoamine Oxidase B In Complex With
Lauryldimethylamine-N-Oxide (Ldao)
pdb|1OJD|F Chain F, Human Monoamine Oxidase B In Complex With
Lauryldimethylamine-N-Oxide (Ldao)
pdb|1OJD|G Chain G, Human Monoamine Oxidase B In Complex With
Lauryldimethylamine-N-Oxide (Ldao)
pdb|1OJD|H Chain H, Human Monoamine Oxidase B In Complex With
Lauryldimethylamine-N-Oxide (Ldao)
pdb|1OJD|I Chain I, Human Monoamine Oxidase B In Complex With
Lauryldimethylamine-N-Oxide (Ldao)
pdb|1OJD|L Chain L, Human Monoamine Oxidase B In Complex With
Lauryldimethylamine-N-Oxide (Ldao)
pdb|1S2Q|A Chain A, Crystal Structure Of Maob In Complex With
N-Propargyl-1(R)-Aminoindan (Rasagiline)
pdb|1S2Q|B Chain B, Crystal Structure Of Maob In Complex With
N-Propargyl-1(R)-Aminoindan (Rasagiline)
pdb|1S2Y|A Chain A, Crystal Structure Of Maob In Complex With
N-propargyl-1(s)- Aminoindan
pdb|1S2Y|B Chain B, Crystal Structure Of Maob In Complex With
N-propargyl-1(s)- Aminoindan
pdb|1S3B|A Chain A, Crystal Structure Of Maob In Complex With N-Methyl-N-
Propargyl-1(R)-Aminoindan
pdb|1S3B|B Chain B, Crystal Structure Of Maob In Complex With N-Methyl-N-
Propargyl-1(R)-Aminoindan
pdb|1S3E|A Chain A, Crystal Structure Of Maob In Complex With 6-Hydroxy-N-
Propargyl-1(R)-Aminoindan
pdb|1S3E|B Chain B, Crystal Structure Of Maob In Complex With 6-Hydroxy-N-
Propargyl-1(R)-Aminoindan
pdb|2BK3|A Chain A, Human Monoamine Oxidase B In Complex With Farnesol
pdb|2BK3|B Chain B, Human Monoamine Oxidase B In Complex With Farnesol
pdb|2BYB|A Chain A, Human Monoamine Oxidase B In Complex With Deprenyl
pdb|2BYB|B Chain B, Human Monoamine Oxidase B In Complex With Deprenyl
pdb|2C64|A Chain A, Mao Inhibition By Rasagiline Analogues
pdb|2C64|B Chain B, Mao Inhibition By Rasagiline Analogues
pdb|2C65|A Chain A, Mao Inhibition By Rasagiline Analogues
pdb|2C65|B Chain B, Mao Inhibition By Rasagiline Analogues
pdb|2C66|A Chain A, Mao Inhibition By Rasagiline Analogues
pdb|2C66|B Chain B, Mao Inhibition By Rasagiline Analogues
pdb|2C67|A Chain A, Mao Inhibition By Rasagiline Analogues
pdb|2C67|B Chain B, Mao Inhibition By Rasagiline Analogues
pdb|2C70|A Chain A, Functional Role Of The Aromatic Cage In Human Monoamine
Oxidase B: Structures And Catalytic Properties Of Tyr435
Mutant Proteins
pdb|2C70|B Chain B, Functional Role Of The Aromatic Cage In Human Monoamine
Oxidase B: Structures And Catalytic Properties Of Tyr435
Mutant Proteins
pdb|2V5Z|A Chain A, Structure Of Human Mao B In Complex With The Selective
Inhibitor Safinamide
pdb|2V5Z|B Chain B, Structure Of Human Mao B In Complex With The Selective
Inhibitor Safinamide
pdb|2V60|A Chain A, Structure Of Human Mao B In Complex With The Selective
Inhibitor
7-(3-Chlorobenzyloxy)-4-Carboxaldehyde-Coumarin
pdb|2V60|B Chain B, Structure Of Human Mao B In Complex With The Selective
Inhibitor
7-(3-Chlorobenzyloxy)-4-Carboxaldehyde-Coumarin
pdb|2V61|A Chain A, Structure Of Human Mao B In Complex With The Selective
Inhibitor 7-(3-Chlorobenzyloxy)-4-(Methylamino)methyl-
Coumarin
pdb|2V61|B Chain B, Structure Of Human Mao B In Complex With The Selective
Inhibitor 7-(3-Chlorobenzyloxy)-4-(Methylamino)methyl-
Coumarin
pdb|2VRL|A Chain A, Structure Of Human Mao B In Complex With Benzylhydrazine
pdb|2VRL|B Chain B, Structure Of Human Mao B In Complex With Benzylhydrazine
pdb|2VRM|A Chain A, Structure Of Human Mao B In Complex With
Phenyethylhydrazine
pdb|2VRM|B Chain B, Structure Of Human Mao B In Complex With
Phenyethylhydrazine
pdb|2VZ2|A Chain A, Human Mao B In Complex With Mofegiline
pdb|2VZ2|B Chain B, Human Mao B In Complex With Mofegiline
pdb|2XCG|A Chain A, Tranylcypromine-Inhibited Human Monoamine Oxidase B In
Complex With 2-(2-Benzofuranyl)-2-Imidazoline
pdb|2XCG|B Chain B, Tranylcypromine-Inhibited Human Monoamine Oxidase B In
Complex With 2-(2-Benzofuranyl)-2-Imidazoline
pdb|2XFN|A Chain A, Human Monoamine Oxidase B In Complex With
2-(2-Benzofuranyl) -2-Imidazoline
pdb|2XFN|B Chain B, Human Monoamine Oxidase B In Complex With
2-(2-Benzofuranyl) -2-Imidazoline
pdb|2XFP|A Chain A, Isatin-Inhibited Human Monoamine Oxidase B In Complex With
2-(2-Benzofuranyl)-2-Imidazoline
pdb|2XFP|B Chain B, Isatin-Inhibited Human Monoamine Oxidase B In Complex With
2-(2-Benzofuranyl)-2-Imidazoline
pdb|2XFQ|A Chain A, Rasagiline-Inhibited Human Monoamine Oxidase B In Complex
With 2-(2-Benzofuranyl)-2-Imidazoline
pdb|2XFQ|B Chain B, Rasagiline-Inhibited Human Monoamine Oxidase B In Complex
With 2-(2-Benzofuranyl)-2-Imidazoline
pdb|3PO7|A Chain A, Human Monoamine Oxidase B In Complex With Zonisamide
pdb|3PO7|B Chain B, Human Monoamine Oxidase B In Complex With Zonisamide
pdb|4A79|A Chain A, Crystal Structure Of Human Monoamine Oxidase B (Mao B) In
Complex With Pioglitazone
pdb|4A79|B Chain B, Crystal Structure Of Human Monoamine Oxidase B (Mao B) In
Complex With Pioglitazone
pdb|4A7A|A Chain A, Crystal Structure Of Human Monoamine Oxidase B (Mao B) In
Complex With Rosiglitazone
pdb|4A7A|B Chain B, Crystal Structure Of Human Monoamine Oxidase B (Mao B) In
Complex With Rosiglitazone
Length = 520
Score = 25.4 bits (54), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 41/99 (41%), Gaps = 8/99 (8%)
Query: 3 LPNDEIIRRVAKQVLALFPSSQGLEVIWSSVVKIGQSLYHEGPGKDPFRPDQKTQ----- 57
L +E ++++ + + S + LE + + Y G F P TQ
Sbjct: 355 LTKEERLKKLCELYAKVLGSLEALEPVHYEEKNWCEEQYSGGCYTTYFPPGILTQYGRVL 414
Query: 58 ---VKNLFLAGSYTKQDYIDIMEGASLSGRQASAYICNA 93
V ++ AG+ T + MEGA +G +A+ I +A
Sbjct: 415 RQPVDRIYFAGTETATHWSGYMEGAVEAGERAAREILHA 453
>pdb|3ZYX|A Chain A, Crystal Structure Of Human Monoamine Oxidase B In Complex
With Methylene Blue And Bearing The Double Mutation
I199a- Y326a
pdb|3ZYX|B Chain B, Crystal Structure Of Human Monoamine Oxidase B In Complex
With Methylene Blue And Bearing The Double Mutation
I199a- Y326a
Length = 519
Score = 25.4 bits (54), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 41/99 (41%), Gaps = 8/99 (8%)
Query: 3 LPNDEIIRRVAKQVLALFPSSQGLEVIWSSVVKIGQSLYHEGPGKDPFRPDQKTQ----- 57
L +E ++++ + + S + LE + + Y G F P TQ
Sbjct: 354 LTKEERLKKLCELYAKVLGSLEALEPVHYEEKNWCEEQYSGGCYTTYFPPGILTQYGRVL 413
Query: 58 ---VKNLFLAGSYTKQDYIDIMEGASLSGRQASAYICNA 93
V ++ AG+ T + MEGA +G +A+ I +A
Sbjct: 414 RQPVDRIYFAGTETATHWSGYMEGAVEAGERAAREILHA 452
>pdb|2XFO|A Chain A, Tranylcypromine-Inhibited Human Monoamine Oxidase B
Ile199ala Mutant In Complex With 2-(2-Benzofuranyl)-2-
Imidazoline
pdb|2XFO|B Chain B, Tranylcypromine-Inhibited Human Monoamine Oxidase B
Ile199ala Mutant In Complex With 2-(2-Benzofuranyl)-2-
Imidazoline
Length = 520
Score = 25.4 bits (54), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 41/99 (41%), Gaps = 8/99 (8%)
Query: 3 LPNDEIIRRVAKQVLALFPSSQGLEVIWSSVVKIGQSLYHEGPGKDPFRPDQKTQ----- 57
L +E ++++ + + S + LE + + Y G F P TQ
Sbjct: 355 LTKEERLKKLCELYAKVLGSLEALEPVHYEEKNWCEEQYSGGCYTTYFPPGILTQYGRVL 414
Query: 58 ---VKNLFLAGSYTKQDYIDIMEGASLSGRQASAYICNA 93
V ++ AG+ T + MEGA +G +A+ I +A
Sbjct: 415 RQPVDRIYFAGTETATHWSGYMEGAVEAGERAAREILHA 453
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.315 0.132 0.369
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,546,991
Number of Sequences: 62578
Number of extensions: 125355
Number of successful extensions: 269
Number of sequences better than 100.0: 16
Number of HSP's better than 100.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 266
Number of HSP's gapped (non-prelim): 16
length of query: 126
length of database: 14,973,337
effective HSP length: 87
effective length of query: 39
effective length of database: 9,529,051
effective search space: 371632989
effective search space used: 371632989
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 45 (21.9 bits)