BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033121
(126 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FV46|ZDS_TARER Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Tagetes
erecta PE=2 SV=1
Length = 587
Score = 199 bits (505), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 99/126 (78%), Positives = 109/126 (86%), Gaps = 5/126 (3%)
Query: 1 MPLPNDEIIRRVAKQVLALFPSSQGLEVIWSSVVKIGQSLYHEGPGKDPFRPDQKTQVKN 60
MPLPN+EII RV+KQVLALFPSSQGLEV WSSVVKIGQSLY EGPGKDPFRPDQKT VKN
Sbjct: 467 MPLPNEEIISRVSKQVLALFPSSQGLEVTWSSVVKIGQSLYREGPGKDPFRPDQKTPVKN 526
Query: 61 LFLAGSYTKQDYIDIMEGASLSGRQASAYICNAREELVALRKQLAAFESQEQMEVPTTTN 120
FLAGSYTKQDYID MEGA+LSGRQASA+IC+A EEL ALRKQLAA +S + + V
Sbjct: 527 FFLAGSYTKQDYIDSMEGATLSGRQASAFICDAGEELAALRKQLAAIQSIDSIGV----- 581
Query: 121 DDLSLV 126
D++SLV
Sbjct: 582 DEMSLV 587
>sp|Q9SMJ3|ZDS_CAPAN Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Capsicum
annuum GN=ZDS PE=1 SV=1
Length = 588
Score = 198 bits (504), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 98/126 (77%), Positives = 111/126 (88%), Gaps = 1/126 (0%)
Query: 1 MPLPNDEIIRRVAKQVLALFPSSQGLEVIWSSVVKIGQSLYHEGPGKDPFRPDQKTQVKN 60
MPLPN+EIIRRV+KQVLALFPSSQGLEV WSSVVKIGQSLY EGPGKDPFRPDQKT V+N
Sbjct: 464 MPLPNEEIIRRVSKQVLALFPSSQGLEVTWSSVVKIGQSLYREGPGKDPFRPDQKTPVEN 523
Query: 61 LFLAGSYTKQDYIDIMEGASLSGRQASAYICNAREELVALRKQLAAFESQEQMEVPTTTN 120
FLAGSYTKQDYID MEGA+LSGRQASAYIC+A E+L+ALRK++AA E E + + +
Sbjct: 524 FFLAGSYTKQDYIDSMEGATLSGRQASAYICDAGEQLLALRKKIAAAELNE-ISKGVSLS 582
Query: 121 DDLSLV 126
D+LSLV
Sbjct: 583 DELSLV 588
>sp|O49901|ZDS_NARPS Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Narcissus
pseudonarcissus GN=ZDS1 PE=2 SV=1
Length = 574
Score = 194 bits (494), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 94/126 (74%), Positives = 107/126 (84%)
Query: 1 MPLPNDEIIRRVAKQVLALFPSSQGLEVIWSSVVKIGQSLYHEGPGKDPFRPDQKTQVKN 60
MPLPND II RV KQVL LFPSSQGLEV+WSSVVKIGQSLY EGPGKDPFRPDQKT VKN
Sbjct: 449 MPLPNDAIIERVRKQVLDLFPSSQGLEVLWSSVVKIGQSLYREGPGKDPFRPDQKTPVKN 508
Query: 61 LFLAGSYTKQDYIDIMEGASLSGRQASAYICNAREELVALRKQLAAFESQEQMEVPTTTN 120
FLAGSYTKQDYID MEGA+LSGRQA+AYIC+A E+L ALRK++AA ++ + + +
Sbjct: 509 FFLAGSYTKQDYIDSMEGATLSGRQAAAYICSAGEDLAALRKKIAADHPEQLINKDSNVS 568
Query: 121 DDLSLV 126
D+LSLV
Sbjct: 569 DELSLV 574
>sp|Q9SE20|ZDS_SOLLC Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Solanum
lycopersicum GN=ZDS PE=2 SV=1
Length = 588
Score = 191 bits (486), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 94/126 (74%), Positives = 107/126 (84%), Gaps = 1/126 (0%)
Query: 1 MPLPNDEIIRRVAKQVLALFPSSQGLEVIWSSVVKIGQSLYHEGPGKDPFRPDQKTQVKN 60
MPL NDEII+RV KQVLALFPSSQGLEV WSSV+KIGQSLY EGPGKDPFRPDQKT V+N
Sbjct: 464 MPLSNDEIIKRVTKQVLALFPSSQGLEVTWSSVLKIGQSLYREGPGKDPFRPDQKTPVEN 523
Query: 61 LFLAGSYTKQDYIDIMEGASLSGRQASAYICNAREELVALRKQLAAFESQEQMEVPTTTN 120
FLAGSYTKQDYID MEGA+LSGRQASAYICN E+L+ALRK++ A E + + + +
Sbjct: 524 FFLAGSYTKQDYIDSMEGATLSGRQASAYICNVGEQLMALRKKITAAELND-ISKGVSLS 582
Query: 121 DDLSLV 126
D+LSLV
Sbjct: 583 DELSLV 588
>sp|Q9ZTP4|ZDS_MAIZE Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Zea mays
GN=ZDS1 PE=2 SV=1
Length = 570
Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 82/104 (78%), Positives = 91/104 (87%)
Query: 1 MPLPNDEIIRRVAKQVLALFPSSQGLEVIWSSVVKIGQSLYHEGPGKDPFRPDQKTQVKN 60
MPLPN+EII +V KQV+ LFPSS+GLEV WSSVVKIGQSLY E PG DPFRPDQKT VKN
Sbjct: 449 MPLPNEEIISKVQKQVVELFPSSRGLEVTWSSVVKIGQSLYREAPGNDPFRPDQKTPVKN 508
Query: 61 LFLAGSYTKQDYIDIMEGASLSGRQASAYICNAREELVALRKQL 104
FL+GSYTKQDYID MEGA+LSGR+ SAYIC A EEL+ALRK+L
Sbjct: 509 FFLSGSYTKQDYIDSMEGATLSGRRTSAYICGAGEELLALRKKL 552
>sp|Q38893|ZDS_ARATH Zeta-carotene desaturase, chloroplastic/chromoplastic
OS=Arabidopsis thaliana GN=ZDS1 PE=1 SV=3
Length = 558
Score = 169 bits (429), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 87/126 (69%), Positives = 97/126 (76%), Gaps = 8/126 (6%)
Query: 1 MPLPNDEIIRRVAKQVLALFPSSQGLEVIWSSVVKIGQSLYHEGPGKDPFRPDQKTQVKN 60
M +PND+II +VA QV LFPSS+GLEV WSSVVKI QSLY E PGKDPFRPDQKT +KN
Sbjct: 441 MRMPNDKIIEKVAMQVTELFPSSRGLEVTWSSVVKIAQSLYREAPGKDPFRPDQKTPIKN 500
Query: 61 LFLAGSYTKQDYIDIMEGASLSGRQASAYICNAREELVALRKQLAAFESQEQMEVPTTTN 120
FLAGSYTKQDYID MEGA+LSGRQAS+YIC+A EEL L K+L S VP
Sbjct: 501 FFLAGSYTKQDYIDSMEGATLSGRQASSYICDAGEELAELNKKL----SSSATAVP---- 552
Query: 121 DDLSLV 126
D+LSLV
Sbjct: 553 DELSLV 558
>sp|Q31N27|ZDS_SYNE7 Probable zeta-carotene desaturase OS=Synechococcus elongatus
(strain PCC 7942) GN=zds PE=3 SV=1
Length = 481
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 55/94 (58%), Positives = 72/94 (76%)
Query: 1 MPLPNDEIIRRVAKQVLALFPSSQGLEVIWSSVVKIGQSLYHEGPGKDPFRPDQKTQVKN 60
+ + N++I + V KQV LFPSS+ L + WS+VVK+ QSLY E PG DPFRPDQKT + N
Sbjct: 384 IAMKNEDIAQHVLKQVHELFPSSRDLNMTWSNVVKLAQSLYREAPGMDPFRPDQKTPIAN 443
Query: 61 LFLAGSYTKQDYIDIMEGASLSGRQASAYICNAR 94
FLAGSYT+QDYID MEGA++SGR+A+ + A+
Sbjct: 444 FFLAGSYTQQDYIDSMEGATISGRRAAKAMLEAQ 477
>sp|P74306|ZDS_SYNY3 Zeta-carotene desaturase OS=Synechocystis sp. (strain PCC 6803 /
Kazusa) GN=crtQ PE=3 SV=1
Length = 489
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 60/105 (57%), Positives = 71/105 (67%), Gaps = 2/105 (1%)
Query: 1 MPLPNDEIIRRVAKQVLALFPSSQGLEVIWSSVVKIGQSLYHEGPGKDPFRPDQKTQVKN 60
M N+ I RV KQV ALFPS+ L + W SV+K+ QSLY E PG D FRP Q T + N
Sbjct: 385 MKESNEAIAYRVLKQVKALFPSAADLNMTWYSVIKLAQSLYREAPGMDLFRPSQATPIAN 444
Query: 61 LFLAGSYTKQDYIDIMEGASLSGRQAS-AYICN-AREELVALRKQ 103
FLAGSYT+QDYID MEGA+LSGRQA+ A + N AR + L Q
Sbjct: 445 FFLAGSYTQQDYIDSMEGATLSGRQAAQAILANQARLQTAVLASQ 489
>sp|Q9R6X4|ZDS_NOSS1 Zeta-carotene desaturase OS=Nostoc sp. (strain PCC 7120 / UTEX
2576) GN=crtQ PE=3 SV=2
Length = 479
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/88 (59%), Positives = 66/88 (75%)
Query: 5 NDEIIRRVAKQVLALFPSSQGLEVIWSSVVKIGQSLYHEGPGKDPFRPDQKTQVKNLFLA 64
N+ I + V KQV LFPSS+ L + W SVVK+ QSLY E PG D +RP+QKT + N FLA
Sbjct: 388 NEAIAQHVLKQVYELFPSSRELNMTWYSVVKLAQSLYREAPGMDVYRPNQKTPIANFFLA 447
Query: 65 GSYTKQDYIDIMEGASLSGRQASAYICN 92
GSYT+QDYID MEGA++SGR+A+ I +
Sbjct: 448 GSYTQQDYIDSMEGATVSGRRAAKVILD 475
>sp|P29273|CRTI_SYNY3 Phytoene dehydrogenase OS=Synechocystis sp. (strain PCC 6803 /
Kazusa) GN=pds PE=3 SV=2
Length = 472
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Query: 5 NDEIIRRVAKQVLALFP----SSQGLEVIWSSVVKIGQSLYHEGPGKDPFRPDQKTQVKN 60
++EI+ ++ LFP ++ S VVK +S+Y PG+ RPDQ+T V N
Sbjct: 364 DEEIVAATMAEIKQLFPQHFNGDNPARLLKSHVVKTPRSVYKATPGRQACRPDQRTSVPN 423
Query: 61 LFLAGSYTKQDYIDIMEGASLSGRQASAYIC 91
+LAG +T Q Y+ MEGA LSG+Q + I
Sbjct: 424 FYLAGDFTMQKYLGSMEGAVLSGKQCAQAIA 454
>sp|P28554|CRTI_SOLLC Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Solanum
lycopersicum GN=PDS PE=2 SV=1
Length = 583
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 54/100 (54%), Gaps = 5/100 (5%)
Query: 5 NDEIIRRVAKQVLALFPSS-----QGLEVIWSSVVKIGQSLYHEGPGKDPFRPDQKTQVK 59
+ EII K++ LFP +++ VVK +S+Y PG +P RP Q++ ++
Sbjct: 472 DSEIIDATMKELATLFPDEISADQSKAKILKYHVVKTPRSVYKTVPGCEPCRPLQRSPIE 531
Query: 60 NLFLAGSYTKQDYIDIMEGASLSGRQASAYICNAREELVA 99
+LAG YTKQ Y+ MEGA LSG+ + I E LV
Sbjct: 532 GFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYELLVG 571
>sp|Q40406|CRTI_NARPS Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Narcissus
pseudonarcissus GN=PDS1 PE=1 SV=1
Length = 570
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 57/109 (52%), Gaps = 5/109 (4%)
Query: 5 NDEIIRRVAKQVLALFPSSQGLE-----VIWSSVVKIGQSLYHEGPGKDPFRPDQKTQVK 59
+ EII R K++ LFP + ++ VVK +S+Y P +P RP Q++ ++
Sbjct: 458 DSEIIERTMKELAKLFPDEIAADQSKAKILKYHVVKTPRSVYKTIPDCEPCRPLQRSPIE 517
Query: 60 NLFLAGSYTKQDYIDIMEGASLSGRQASAYICNAREELVALRKQLAAFE 108
+LAG YT Q Y+ MEGA LSG+ + I E LV K+ + E
Sbjct: 518 GFYLAGDYTNQKYLASMEGAVLSGKLCAQSIVQDYELLVRRSKKASTAE 566
>sp|P28553|CRTI_SOYBN Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Glycine max
GN=PDS1 PE=2 SV=1
Length = 570
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 57/104 (54%), Gaps = 6/104 (5%)
Query: 5 NDEIIRRVAKQVLALFPSS-----QGLEVIWSSVVKIGQSLYHEGPGKDPFRPDQKTQVK 59
+D+II+ ++ LFP +++ VVK +S+Y P +P RP Q++ ++
Sbjct: 459 DDDIIQATMTELAKLFPDEISADQSKAKILKYHVVKTPRSVYKTVPNCEPCRPIQRSPIE 518
Query: 60 NLFLAGSYTKQDYIDIMEGASLSGRQASAYICNAREELVALRKQ 103
+LAG YTKQ Y+ MEGA LSG+ + I EL+A R Q
Sbjct: 519 GFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQ-DSELLATRGQ 561
>sp|P80093|PDS_CAPAN 15-cis-phytoene desaturase, chloroplastic/chromoplastic OS=Capsicum
annuum GN=PDS PE=1 SV=1
Length = 582
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 53/100 (53%), Gaps = 5/100 (5%)
Query: 5 NDEIIRRVAKQVLALFPSS-----QGLEVIWSSVVKIGQSLYHEGPGKDPFRPDQKTQVK 59
+ EII K++ LFP +++ VVK +S+Y PG +P R Q++ V+
Sbjct: 471 DSEIIDATMKELAKLFPDEISADQSKAKILKYHVVKTPRSVYKTVPGCEPCRLLQRSPVE 530
Query: 60 NLFLAGSYTKQDYIDIMEGASLSGRQASAYICNAREELVA 99
+LAG YTKQ Y+ MEGA LSG+ + I E LV
Sbjct: 531 GFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYELLVG 570
>sp|P49086|CRTI_MAIZE Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Zea mays
GN=PDS1 PE=2 SV=1
Length = 571
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 62/120 (51%), Gaps = 10/120 (8%)
Query: 5 NDEIIRRVAKQVLALFPSSQGLE-----VIWSSVVKIGQSLYHEGPGKDPFRPDQKTQVK 59
+ EII +++ LFP + ++ +VK +S+Y P +P RP Q++ ++
Sbjct: 457 DTEIIDATMEELAKLFPDEIAADQSKAKILKYHIVKTPRSVYKTVPNCEPCRPLQRSPIE 516
Query: 60 NLFLAGSYTKQDYIDIMEGASLSGRQASAYICNAREELVALRKQLAAFESQEQMEVPTTT 119
+LAG YTKQ Y+ MEGA LSG+ + I L ALR Q +S + EVP +
Sbjct: 517 GFYLAGDYTKQKYLASMEGAVLSGKLCAQSIVQDYSRL-ALRSQ----KSLQSGEVPVPS 571
>sp|Q07356|PDS_ARATH 15-cis-phytoene desaturase, chloroplastic/chromoplastic
OS=Arabidopsis thaliana GN=PDS PE=1 SV=1
Length = 566
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 53/100 (53%), Gaps = 5/100 (5%)
Query: 5 NDEIIRRVAKQVLALFPSS-----QGLEVIWSSVVKIGQSLYHEGPGKDPFRPDQKTQVK 59
+ +II K++ LFP +++ VVK +S+Y P +P RP Q++ ++
Sbjct: 453 DSDIIDATMKELEKLFPDEISADQSKAKILKYHVVKTPRSVYKTIPNCEPCRPLQRSPIE 512
Query: 60 NLFLAGSYTKQDYIDIMEGASLSGRQASAYICNAREELVA 99
+LAG YTKQ Y+ MEGA LSG+ S I E L A
Sbjct: 513 GFYLAGDYTKQKYLASMEGAVLSGKFCSQSIVQDYELLAA 552
>sp|P26294|PDS_SYNE7 15-cis-phytoene desaturase OS=Synechococcus elongatus (strain PCC
7942) GN=pds PE=1 SV=1
Length = 474
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 39/65 (60%)
Query: 33 VVKIGQSLYHEGPGKDPFRPDQKTQVKNLFLAGSYTKQDYIDIMEGASLSGRQASAYICN 92
+VK S+Y PG+ +RPDQ + + N FL G YT Q Y+ MEGA LSG+ + I
Sbjct: 396 IVKTPLSVYKATPGRQQYRPDQASPIANFFLTGDYTMQRYLASMEGAVLSGKLTAQAIIA 455
Query: 93 AREEL 97
++EL
Sbjct: 456 RQDEL 460
>sp|Q0DUI8|CRTI_ORYSJ Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Oryza sativa
subsp. japonica GN=PDS PE=2 SV=2
Length = 578
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 62/120 (51%), Gaps = 11/120 (9%)
Query: 5 NDEIIRRVAKQVLALFPSSQGLE-----VIWSSVVKIGQSLYHEGPGKDPFRPDQKTQVK 59
+ EII +++ LFP + ++ VVK +S+Y P +P RP Q++ ++
Sbjct: 465 DTEIIEATMQELAKLFPDEIAADQSKAKILKYHVVKTPRSVYKTIPDCEPCRPLQRSPIE 524
Query: 60 NLFLAGSYTKQDYIDIMEGASLSGRQASAYICNAREELVALRKQLAAFESQEQMEVPTTT 119
+LAG YTKQ Y+ MEGA LSG+ + + + L R+ L + +S EVP +
Sbjct: 525 GFYLAGDYTKQKYLASMEGAVLSGKLCAQSVVEDYKMLS--RRSLKSLQS----EVPVAS 578
>sp|A2XDA1|CRTI_ORYSI Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Oryza sativa
subsp. indica GN=PDS1 PE=2 SV=2
Length = 578
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 62/120 (51%), Gaps = 11/120 (9%)
Query: 5 NDEIIRRVAKQVLALFPSSQGLE-----VIWSSVVKIGQSLYHEGPGKDPFRPDQKTQVK 59
+ EII +++ LFP + ++ VVK +S+Y P +P RP Q++ ++
Sbjct: 465 DTEIIEATMQELAKLFPDEIAADQSKAKILKYHVVKTPRSVYKTIPDCEPCRPLQRSPIE 524
Query: 60 NLFLAGSYTKQDYIDIMEGASLSGRQASAYICNAREELVALRKQLAAFESQEQMEVPTTT 119
+LAG YTKQ Y+ MEGA LSG+ + + + L R+ L + +S EVP +
Sbjct: 525 GFYLAGDYTKQKYLASMEGAVLSGKLCAQSVVEDYKMLS--RRSLKSLQS----EVPVAS 578
>sp|P55349|Y4AB_RHISN Uncharacterized protein y4aB OS=Rhizobium sp. (strain NGR234)
GN=NGR_a00450 PE=4 SV=1
Length = 417
Score = 38.1 bits (87), Expect = 0.018, Method: Composition-based stats.
Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 15/82 (18%)
Query: 21 PSSQGLEVIWSSVVKIG---------------QSLYHEGPGKDPFRPDQKTQVKNLFLAG 65
P + + VIW V + G ++ + P ++ RP T KNLFLAG
Sbjct: 327 PREEVVRVIWRDVCEAGGISGELPPWQIVCERRATFQATPEQNALRPGPVTGCKNLFLAG 386
Query: 66 SYTKQDYIDIMEGASLSGRQAS 87
+T +EG+ SG +A+
Sbjct: 387 DWTATGLPATIEGSVRSGNRAA 408
>sp|O74945|RIA1_SCHPO Ribosome assembly protein 1 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=ria1 PE=3 SV=1
Length = 1000
Score = 32.7 bits (73), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Query: 25 GLEVIWSSVVKIGQSLYHEGPGKDPFRPDQ---KTQVKNLFL 63
G I+S + +GQ +Y GP DP P++ K V++L+L
Sbjct: 470 GFARIYSGTISVGQEVYVYGPKYDPVNPEKHITKVTVESLYL 511
>sp|Q6NSN2|AOF_DANRE Amine oxidase [flavin-containing] OS=Danio rerio GN=mao PE=1 SV=1
Length = 522
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 54/125 (43%), Gaps = 17/125 (13%)
Query: 3 LPNDEIIRRVAKQVLALFPSSQGLEVIWSSVVKIGQSLYHEGPGKDPFRPDQKTQ----- 57
L DE RR+ + + S + L + + Y G F P TQ
Sbjct: 356 LTRDERKRRICEIYARVLGSEEALYPVHYEEKNWCEEEYSGGCYTAYFPPGIMTQFGRVL 415
Query: 58 ---VKNLFLAGSYTKQDYIDIMEGASLSGRQASAYICNAREELVALRKQLAA--FESQ-E 111
V L+ AG+ T ++ MEGA +G +AS RE + A+ K A+ ++S+ E
Sbjct: 416 REPVGRLYFAGTETATEWSGYMEGAVQAGERAS------REVMCAMGKLHASQIWQSEPE 469
Query: 112 QMEVP 116
M+VP
Sbjct: 470 SMDVP 474
>sp|Q96456|STAD_HELAN Acyl-[acyl-carrier-protein] desaturase, chloroplastic OS=Helianthus
annuus PE=2 SV=1
Length = 396
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 13/64 (20%)
Query: 65 GSYTKQDYIDIME------------GASLSGRQASAYICNAREELVALRKQLAAFESQEQ 112
G YT +DY DI+E G S GR+A Y+C + L ++ +A ++E
Sbjct: 323 GVYTAKDYADILEFLVGRWKVADLTGLSGEGRKAQDYVCGLAPRIRRLEERNSA-RAKES 381
Query: 113 MEVP 116
+ VP
Sbjct: 382 VNVP 385
>sp|D3Z3C6|ZFAN4_MOUSE AN1-type zinc finger protein 4 OS=Mus musculus GN=Zfand4 PE=4 SV=1
Length = 758
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
Query: 6 DEIIRRVAKQV--LALFPSSQGLEVIWSSVV---KIGQSLYHEGPGKDPFRPDQKTQVKN 60
DE IR+ + Q F S++G+ + S+ +IG+S++H P K P + +K +K+
Sbjct: 639 DENIRKSSPQSEPTDFFLSARGIGMSGSNAAAGKRIGESIHHLPPVKAPLQTKKKI-MKH 697
Query: 61 LFLAGSYT 68
FL G T
Sbjct: 698 CFLCGKKT 705
>sp|Q8PZQ0|GLYA_METMA Serine hydroxymethyltransferase OS=Methanosarcina mazei (strain
ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM
88) GN=glyA PE=3 SV=2
Length = 412
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 9/66 (13%)
Query: 18 ALFPSSQG---LEVIWSSVVKIGQSLYHEGPGKDPFRPDQKTQVKNLFLAGSYTKQDYID 74
A+FP QG + +I + V +++ E FR DQ VKN + S KQ D
Sbjct: 250 AVFPGIQGGPLMHIIAAKAVAFKEAMSEE------FRQDQDQTVKNAKVLCSCLKQKGFD 303
Query: 75 IMEGAS 80
I+ G +
Sbjct: 304 IVSGGT 309
>sp|Q42770|STAD_GOSHI Acyl-[acyl-carrier-protein] desaturase, chloroplastic OS=Gossypium
hirsutum PE=2 SV=1
Length = 397
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 12/40 (30%)
Query: 65 GSYTKQDYIDIME------------GASLSGRQASAYICN 92
G YT +DY+DI+E G S GR+A Y+C+
Sbjct: 323 GVYTAKDYVDIVEHLVDRWKVKELAGLSAEGRKAQDYLCS 362
>sp|Q5WKY9|IOLC_BACSK 5-dehydro-2-deoxygluconokinase OS=Bacillus clausii (strain KSM-K16)
GN=iolC PE=3 SV=1
Length = 326
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 33/54 (61%), Gaps = 7/54 (12%)
Query: 54 QKTQVKNLFLAGSY-----TKQDYIDIMEGASLSGRQASAYICNARE-ELVALR 101
++T V LAG T+++Y DIMEGAS SG + +A + A+E ELV ++
Sbjct: 186 EETSVYYTLLAGMAHIVIGTREEY-DIMEGASASGNEQTAKMLFAKEPELVVIK 238
>sp|Q42807|STAD_SOYBN Acyl-[acyl-carrier-protein] desaturase, chloroplastic OS=Glycine
max GN=ACPD PE=2 SV=1
Length = 411
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 12/39 (30%)
Query: 65 GSYTKQDYIDIME------------GASLSGRQASAYIC 91
G YT +DY DI+E G S GR+A YIC
Sbjct: 318 GVYTAKDYADILEFLVGRWKVEQLTGLSGEGRKAQEYIC 356
>sp|Q6YYZ1|LDL2_ORYSJ Lysine-specific histone demethylase 1 homolog 2 OS=Oryza sativa
subsp. japonica GN=Os08g0143400 PE=2 SV=1
Length = 763
Score = 30.0 bits (66), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Query: 61 LFLAGSYTKQDYIDIMEGASLSGRQASAYICNAREELVALRKQLAAFESQEQMEVPTTTN 120
LF AG T + Y M GA LSG + ++ I +A E L + Q+ + +
Sbjct: 566 LFFAGEATNRAYPATMHGALLSGLREASKILHASES--RLNSDYKKYALQKSIRLINNVL 623
Query: 121 DDL 123
DDL
Sbjct: 624 DDL 626
>sp|Q03142|FGFR4_MOUSE Fibroblast growth factor receptor 4 OS=Mus musculus GN=Fgfr4 PE=1
SV=3
Length = 799
Score = 30.0 bits (66), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Query: 36 IGQSLYHEGPGKDPFRPDQKTQVKNLFLAGSYTKQDYIDI---MEGASLSGRQ 85
GQ + E G DP RPDQ + V L + + +D D+ ME L GR
Sbjct: 475 FGQVVRAEAFGMDPSRPDQTSTVAVKMLKDNASDKDLADLVSEMEVMKLIGRH 527
>sp|P46253|STAD_SOLTU Acyl-[acyl-carrier-protein] desaturase, chloroplastic OS=Solanum
tuberosum PE=2 SV=1
Length = 393
Score = 29.6 bits (65), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 12/39 (30%)
Query: 65 GSYTKQDYIDIME------------GASLSGRQASAYIC 91
G YT +DY DI+E G S GR+A Y+C
Sbjct: 320 GVYTAKDYADILEFHVGRWEVEKLTGLSSEGRRAQDYVC 358
>sp|P22455|FGFR4_HUMAN Fibroblast growth factor receptor 4 OS=Homo sapiens GN=FGFR4 PE=1
SV=2
Length = 802
Score = 29.6 bits (65), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Query: 36 IGQSLYHEGPGKDPFRPDQKTQVKNLFLAGSYTKQDYIDI---MEGASLSGRQ 85
GQ + E G DP RPDQ + V L + + +D D+ ME L GR
Sbjct: 478 FGQVVRAEAFGMDPARPDQASTVAVKMLKDNASDKDLADLVSEMEVMKLIGRH 530
>sp|Q6R7F3|Y076_OSHVF Uncharacterized protein ORF76 OS=Ostreid herpesvirus 1 (isolate
France) GN=ORF76 PE=4 SV=1
Length = 678
Score = 29.3 bits (64), Expect = 7.4, Method: Composition-based stats.
Identities = 14/52 (26%), Positives = 23/52 (44%)
Query: 44 GPGKDPFRPDQKTQVKNLFLAGSYTKQDYIDIMEGASLSGRQASAYICNARE 95
G + F+ D + LF+A Y ++D I + A + G + Y C E
Sbjct: 333 GGENEEFKRDVVNYIAKLFIAAGYMQKDEISRSKYAQIEGEKVEQYTCTDPE 384
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.132 0.369
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,023,942
Number of Sequences: 539616
Number of extensions: 1622403
Number of successful extensions: 3840
Number of sequences better than 100.0: 33
Number of HSP's better than 100.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 3813
Number of HSP's gapped (non-prelim): 33
length of query: 126
length of database: 191,569,459
effective HSP length: 92
effective length of query: 34
effective length of database: 141,924,787
effective search space: 4825442758
effective search space used: 4825442758
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)