BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>033124
MASIYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFET
LDYWGIQRKRTKIKCNNCGALLGYIYDDGPPAVDTPGQFHFGPSQVIPRYPRYRLKTKAL
RISTET

High Scoring Gene Products

Symbol, full name Information P value
AT2G17705 protein from Arabidopsis thaliana 1.4e-46
AT4G08330 protein from Arabidopsis thaliana 9.7e-09
MSRB3
Uncharacterized protein
protein from Gallus gallus 0.00066

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  033124
        (126 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:504955974 - symbol:AT2G17705 "AT2G17705" speci...   488  1.4e-46   1
TAIR|locus:2137455 - symbol:AT4G08330 "AT4G08330" species...   131  9.7e-09   1
UNIPROTKB|E1C1X3 - symbol:MSRB3 "Uncharacterized protein"...    84  0.00066   2


>TAIR|locus:504955974 [details] [associations]
            symbol:AT2G17705 "AT2G17705" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM] [GO:0005886 "plasma membrane" evidence=IDA]
            InterPro:IPR002579 GO:GO:0005886 EMBL:CP002685
            GenomeReviews:CT485783_GR GO:GO:0033743 Gene3D:2.170.150.20
            EMBL:AY501355 EMBL:AY649283 IPI:IPI00544922 RefSeq:NP_849966.2
            UniGene:At.49344 ProteinModelPortal:Q6RF46 SMR:Q6RF46 PaxDb:Q6RF46
            PRIDE:Q6RF46 DNASU:816279 EnsemblPlants:AT2G17705.1 GeneID:816279
            KEGG:ath:AT2G17705 TAIR:At2g17705 eggNOG:NOG246171
            HOGENOM:HOG000239709 InParanoid:Q6RF46 OMA:WGIQRKR PhylomeDB:Q6RF46
            ProtClustDB:CLSN2681721 Genevestigator:Q6RF46 Uniprot:Q6RF46
        Length = 127

 Score = 488 (176.8 bits), Expect = 1.4e-46, P = 1.4e-46
 Identities = 89/127 (70%), Positives = 105/127 (82%)

Query:     1 MAS-IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFE 59
             MAS IY+CKECG++LNLN + L+P   YF AGNKGTLSFA +D+ KFR EKEDKI PFFE
Sbjct:     1 MASTIYTCKECGSDLNLNPNDLFPPDFYFEAGNKGTLSFAAVDAEKFRFEKEDKIMPFFE 60

Query:    60 TLDYWGIQRKRTKIKCNNCGALLGYIYDDGPPAVDTPGQFHFGPSQVIPRYPRYRLKTKA 119
             TL+YWGIQRKRTKIKC +C  L+GYIYDDGPP     GQ+ FGPSQVIPR PRYR KTKA
Sbjct:    61 TLNYWGIQRKRTKIKCTSCNHLIGYIYDDGPPLTGGIGQYGFGPSQVIPRAPRYRFKTKA 120

Query:   120 LRISTET 126
             +++S++T
Sbjct:   121 VQVSSQT 127


>TAIR|locus:2137455 [details] [associations]
            symbol:AT4G08330 "AT4G08330" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0005886 "plasma membrane" evidence=IDA]
            GO:GO:0005886 GO:GO:0009507 EMBL:CP002687 GenomeReviews:CT486007_GR
            EMBL:AL109819 EMBL:AL161511 EMBL:BT004992 EMBL:AK117649
            IPI:IPI00549080 PIR:T14187 RefSeq:NP_192573.1 UniGene:At.27988
            UniGene:At.71009 ProteinModelPortal:Q9STN5 PaxDb:Q9STN5
            PRIDE:Q9STN5 EnsemblPlants:AT4G08330.1 GeneID:826387
            KEGG:ath:AT4G08330 TAIR:At4g08330 eggNOG:NOG322026
            HOGENOM:HOG000238435 InParanoid:Q9STN5 OMA:RTKLLCR PhylomeDB:Q9STN5
            ProtClustDB:CLSN2916135 Genevestigator:Q9STN5 Uniprot:Q9STN5
        Length = 164

 Score = 131 (51.2 bits), Expect = 9.7e-09, P = 9.7e-09
 Identities = 35/123 (28%), Positives = 56/123 (45%)

Query:     5 YSCKECGTNLNLNTSHLYPATV---YFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETL 61
             YSC  CG  LNL++++   +T+   Y  +   G +SF  ID  +F    E +  P F   
Sbjct:    38 YSCGSCGYELNLSSTNRITSTIGSKYGKSMKSGIISFFNIDEGRFSQVDEFQCMPHFSRY 97

Query:    62 DYWGIQRKRTKIKCNNCGALLGYIYDDGPPAVDTPGQFHFGPSQVIPRYPRYRLKTKALR 121
               WG+ R RTK+ C  C   +G    +  P      Q     S  I    +Y ++ ++L+
Sbjct:    98 S-WGLFRHRTKLLCRKCNNYIGNASQEKAPEYALVTQNSDPTSPRIGSVTKYDIRIRSLQ 156

Query:   122 IST 124
              S+
Sbjct:   157 PSS 159


>UNIPROTKB|E1C1X3 [details] [associations]
            symbol:MSRB3 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005783
            "endoplasmic reticulum" evidence=IEA] [GO:0008270 "zinc ion
            binding" evidence=IEA] [GO:0030091 "protein repair" evidence=IEA]
            [GO:0033743 "peptide-methionine (R)-S-oxide reductase activity"
            evidence=IEA] HAMAP:MF_01400 InterPro:IPR002579 Pfam:PF01641
            GO:GO:0005783 GO:GO:0005739 GO:GO:0008270 InterPro:IPR011057
            SUPFAM:SSF51316 GO:GO:0030091 GO:GO:0033743 Gene3D:2.170.150.20
            TIGRFAMs:TIGR00357 KO:K07305 GeneTree:ENSGT00510000046802
            CTD:253827 OMA:IDEERDV EMBL:AADN02009901 EMBL:AADN02009902
            IPI:IPI00576246 RefSeq:NP_001186507.1 UniGene:Gga.10135
            ProteinModelPortal:E1C1X3 Ensembl:ENSGALT00000028088 GeneID:417833
            KEGG:gga:417833 NextBio:20821075 Uniprot:E1C1X3
        Length = 184

 Score = 84 (34.6 bits), Expect = 0.00066, Sum P(2) = 0.00066
 Identities = 19/40 (47%), Positives = 24/40 (60%)

Query:    52 DKIRPFFETL-DYWGIQRKRTKIKCNNCGALLGYIYDDGP 90
             D I P   TL D +     R +I C+ CGA LG+I+DDGP
Sbjct:   104 DVISPDTITLTDDFSYGMHRIEISCSQCGAHLGHIFDDGP 143

 Score = 38 (18.4 bits), Expect = 0.00066, Sum P(2) = 0.00066
 Identities = 7/11 (63%), Positives = 7/11 (63%)

Query:     4 IYSCKECGTNL 14
             IY C  CGT L
Sbjct:    76 IYKCVVCGTPL 86


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.139   0.437    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      126       126   0.00091  102 3  11 22  0.37    31
                                                     29  0.40    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  587 (62 KB)
  Total size of DFA:  139 KB (2086 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  12.63u 0.10s 12.73t   Elapsed:  00:00:00
  Total cpu time:  12.64u 0.10s 12.74t   Elapsed:  00:00:00
  Start:  Fri May 10 15:12:56 2013   End:  Fri May 10 15:12:56 2013

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