BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033124
(126 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|449456857|ref|XP_004146165.1| PREDICTED: uncharacterized protein At4g08330, chloroplastic-like
[Cucumis sativus]
Length = 126
Score = 223 bits (568), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 100/126 (79%), Positives = 114/126 (90%)
Query: 1 MASIYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFET 60
MASIYSC ECGTNLNLN++HL+P YF AGNKGTLSF+ IDSTKFRLEKEDK+RPFFET
Sbjct: 1 MASIYSCTECGTNLNLNSTHLFPPDFYFEAGNKGTLSFSFIDSTKFRLEKEDKLRPFFET 60
Query: 61 LDYWGIQRKRTKIKCNNCGALLGYIYDDGPPAVDTPGQFHFGPSQVIPRYPRYRLKTKAL 120
L+YWGIQRKRTK+KCN+CG L+GY+YDDGPP D+PGQFHFGPSQVIPR PRYR K KAL
Sbjct: 61 LNYWGIQRKRTKLKCNSCGHLVGYVYDDGPPLTDSPGQFHFGPSQVIPRAPRYRFKIKAL 120
Query: 121 RISTET 126
RI++E+
Sbjct: 121 RITSES 126
>gi|225431343|ref|XP_002278070.1| PREDICTED: uncharacterized protein At4g08330, chloroplastic [Vitis
vinifera]
Length = 126
Score = 223 bits (567), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 99/126 (78%), Positives = 113/126 (89%)
Query: 1 MASIYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFET 60
MAS+YSC+ECGTNLNLN +HL+P+ YF AGNKGTLSFA +D+TKFR EKEDKIRPFFET
Sbjct: 1 MASVYSCRECGTNLNLNATHLFPSDFYFDAGNKGTLSFACVDATKFRFEKEDKIRPFFET 60
Query: 61 LDYWGIQRKRTKIKCNNCGALLGYIYDDGPPAVDTPGQFHFGPSQVIPRYPRYRLKTKAL 120
LDYWGIQRKRTKIKCN+CG L+GYIYDDGPP D+PGQ HFGPSQVIPR PRYR KTK L
Sbjct: 61 LDYWGIQRKRTKIKCNSCGRLVGYIYDDGPPLTDSPGQLHFGPSQVIPRAPRYRFKTKTL 120
Query: 121 RISTET 126
+I+++T
Sbjct: 121 QIASQT 126
>gi|449524330|ref|XP_004169176.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein At4g08330,
chloroplastic-like [Cucumis sativus]
Length = 126
Score = 218 bits (554), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 98/126 (77%), Positives = 112/126 (88%)
Query: 1 MASIYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFET 60
MA IYSC ECGTNLNLN++HL+P YF AGNKGTLSF+ IDSTKFRLEKEDK+RPFFET
Sbjct: 1 MAYIYSCTECGTNLNLNSTHLFPPDFYFEAGNKGTLSFSFIDSTKFRLEKEDKLRPFFET 60
Query: 61 LDYWGIQRKRTKIKCNNCGALLGYIYDDGPPAVDTPGQFHFGPSQVIPRYPRYRLKTKAL 120
L+YWGIQRKRTK+KCN+CG L+GY+YDD PP D+PGQFHFGPSQVIPR PRYR K KAL
Sbjct: 61 LNYWGIQRKRTKLKCNSCGHLVGYVYDDXPPLTDSPGQFHFGPSQVIPRAPRYRFKIKAL 120
Query: 121 RISTET 126
RI++E+
Sbjct: 121 RITSES 126
>gi|296084062|emb|CBI24450.3| unnamed protein product [Vitis vinifera]
Length = 139
Score = 215 bits (547), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 96/123 (78%), Positives = 109/123 (88%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
YSC+ECGTNLNLN +HL+P+ YF AGNKGTLSFA +D+TKFR EKEDKIRPFFETLDY
Sbjct: 17 FYSCRECGTNLNLNATHLFPSDFYFDAGNKGTLSFACVDATKFRFEKEDKIRPFFETLDY 76
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGPPAVDTPGQFHFGPSQVIPRYPRYRLKTKALRIS 123
WGIQRKRTKIKCN+CG L+GYIYDDGPP D+PGQ HFGPSQVIPR PRYR KTK L+I+
Sbjct: 77 WGIQRKRTKIKCNSCGRLVGYIYDDGPPLTDSPGQLHFGPSQVIPRAPRYRFKTKTLQIA 136
Query: 124 TET 126
++T
Sbjct: 137 SQT 139
>gi|224133588|ref|XP_002327632.1| predicted protein [Populus trichocarpa]
gi|222836717|gb|EEE75110.1| predicted protein [Populus trichocarpa]
Length = 126
Score = 212 bits (540), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 97/126 (76%), Positives = 110/126 (87%)
Query: 1 MASIYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFET 60
MASIY+C ECGTNLNLNT+HLYP YF AGNKGTLSF+ IDSTKF+ E+EDKIRPFFET
Sbjct: 1 MASIYTCIECGTNLNLNTTHLYPQDFYFEAGNKGTLSFSSIDSTKFKFEEEDKIRPFFET 60
Query: 61 LDYWGIQRKRTKIKCNNCGALLGYIYDDGPPAVDTPGQFHFGPSQVIPRYPRYRLKTKAL 120
++YWGIQRKRTKIKCN+CG L+GYIYDDG P+ +PGQF GPSQ IPR PRYR KTKAL
Sbjct: 61 VNYWGIQRKRTKIKCNSCGCLVGYIYDDGQPSTISPGQFGLGPSQAIPRAPRYRFKTKAL 120
Query: 121 RISTET 126
RI++ET
Sbjct: 121 RIASET 126
>gi|357483933|ref|XP_003612253.1| hypothetical protein MTR_5g022990 [Medicago truncatula]
gi|355513588|gb|AES95211.1| hypothetical protein MTR_5g022990 [Medicago truncatula]
gi|388495256|gb|AFK35694.1| unknown [Medicago truncatula]
Length = 126
Score = 210 bits (534), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 92/126 (73%), Positives = 110/126 (87%)
Query: 1 MASIYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFET 60
MASIY+C EC TNLNLNTS+ YP YF AGNK ++SF+ ID+TKF+ EKEDKIRPFFET
Sbjct: 1 MASIYTCSECNTNLNLNTSYTYPPDFYFEAGNKNSISFSTIDATKFKFEKEDKIRPFFET 60
Query: 61 LDYWGIQRKRTKIKCNNCGALLGYIYDDGPPAVDTPGQFHFGPSQVIPRYPRYRLKTKAL 120
++YWGIQRKRTKIKCNNC L+GY+YDDGPP ++TPGQFH GPSQVIPR PRYR K+K+L
Sbjct: 61 INYWGIQRKRTKIKCNNCNHLVGYVYDDGPPLINTPGQFHMGPSQVIPRAPRYRFKSKSL 120
Query: 121 RISTET 126
RI+++T
Sbjct: 121 RITSQT 126
>gi|351725921|ref|NP_001237365.1| uncharacterized protein LOC100500650 [Glycine max]
gi|255630855|gb|ACU15790.1| unknown [Glycine max]
Length = 125
Score = 202 bits (515), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 88/124 (70%), Positives = 105/124 (84%)
Query: 1 MASIYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFET 60
MAS+YSC ECG+NLNLN++H YP YF AGNKG++SF+ +D TKF+ EKEDK+RPFFET
Sbjct: 1 MASVYSCTECGSNLNLNSAHAYPPDFYFEAGNKGSVSFSAVDPTKFKFEKEDKLRPFFET 60
Query: 61 LDYWGIQRKRTKIKCNNCGALLGYIYDDGPPAVDTPGQFHFGPSQVIPRYPRYRLKTKAL 120
++YWGIQRKRTKIKCN C LL Y+YDDGPP ++PGQFH GPSQVIPR PRYR KTK L
Sbjct: 61 VNYWGIQRKRTKIKCNTCDCLLDYVYDDGPPLTNSPGQFHMGPSQVIPRAPRYRFKTKTL 120
Query: 121 RIST 124
RI++
Sbjct: 121 RITS 124
>gi|297832390|ref|XP_002884077.1| protein-methionine-s-oxide reductase [Arabidopsis lyrata subsp.
lyrata]
gi|297329917|gb|EFH60336.1| protein-methionine-s-oxide reductase [Arabidopsis lyrata subsp.
lyrata]
Length = 127
Score = 192 bits (488), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 87/124 (70%), Positives = 104/124 (83%)
Query: 3 SIYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLD 62
+IY+CKECG++LNLN + L+P YF AGNKGTLSFA +D+ KFR EKEDKI PFFETL+
Sbjct: 4 TIYTCKECGSDLNLNPNDLFPPDFYFEAGNKGTLSFAAVDAEKFRFEKEDKIMPFFETLN 63
Query: 63 YWGIQRKRTKIKCNNCGALLGYIYDDGPPAVDTPGQFHFGPSQVIPRYPRYRLKTKALRI 122
YWGIQRKRTKIKCN+C L+GYIYDDGPP GQ+ FGPSQVIPR PRYR KTKA+++
Sbjct: 64 YWGIQRKRTKIKCNSCNHLIGYIYDDGPPLTGGIGQYGFGPSQVIPRAPRYRFKTKAVQV 123
Query: 123 STET 126
S++T
Sbjct: 124 SSQT 127
>gi|79591151|ref|NP_849966.2| uncharacterized protein [Arabidopsis thaliana]
gi|41059785|gb|AAR99367.1| hypothetical protein At2g17705 [Arabidopsis thaliana]
gi|50058911|gb|AAT69200.1| hypothetical protein At2g17705 [Arabidopsis thaliana]
gi|330251577|gb|AEC06671.1| uncharacterized protein [Arabidopsis thaliana]
Length = 127
Score = 190 bits (483), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 86/125 (68%), Positives = 104/125 (83%)
Query: 2 ASIYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETL 61
++IY+CKECG++LNLN + L+P YF AGNKGTLSFA +D+ KFR EKEDKI PFFETL
Sbjct: 3 STIYTCKECGSDLNLNPNDLFPPDFYFEAGNKGTLSFAAVDAEKFRFEKEDKIMPFFETL 62
Query: 62 DYWGIQRKRTKIKCNNCGALLGYIYDDGPPAVDTPGQFHFGPSQVIPRYPRYRLKTKALR 121
+YWGIQRKRTKIKC +C L+GYIYDDGPP GQ+ FGPSQVIPR PRYR KTKA++
Sbjct: 63 NYWGIQRKRTKIKCTSCNHLIGYIYDDGPPLTGGIGQYGFGPSQVIPRAPRYRFKTKAVQ 122
Query: 122 ISTET 126
+S++T
Sbjct: 123 VSSQT 127
>gi|125542312|gb|EAY88451.1| hypothetical protein OsI_09916 [Oryza sativa Indica Group]
Length = 138
Score = 182 bits (461), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 80/119 (67%), Positives = 95/119 (79%)
Query: 5 YSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDYW 64
Y C ECG +LNL + LYP VYF AGNKGTLSF+ +D ++ R EDKIRPFFETL+YW
Sbjct: 11 YRCAECGADLNLTAAQLYPEGVYFEAGNKGTLSFSWVDESRLRFAPEDKIRPFFETLNYW 70
Query: 65 GIQRKRTKIKCNNCGALLGYIYDDGPPAVDTPGQFHFGPSQVIPRYPRYRLKTKALRIS 123
GIQRKRT+I C+ CG LLGY+YDDGPPA+D GQF GPSQVIPR PRYR+KTKA+ ++
Sbjct: 71 GIQRKRTRISCDACGRLLGYVYDDGPPAMDGTGQFGMGPSQVIPRRPRYRIKTKAVTVA 129
>gi|108706062|gb|ABF93857.1| expressed protein [Oryza sativa Japonica Group]
Length = 138
Score = 181 bits (459), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 80/118 (67%), Positives = 94/118 (79%)
Query: 5 YSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDYW 64
Y C ECG +LNL + LYP VYF AGNKGTLSF+ +D ++ R EDKIRPFFETL+YW
Sbjct: 11 YRCAECGADLNLTAAQLYPEGVYFEAGNKGTLSFSWVDESRLRFAPEDKIRPFFETLNYW 70
Query: 65 GIQRKRTKIKCNNCGALLGYIYDDGPPAVDTPGQFHFGPSQVIPRYPRYRLKTKALRI 122
GIQRKRT+I C+ CG LLGY+YDDGPPA+D GQF GPSQVIPR PRYR+KTKA+ +
Sbjct: 71 GIQRKRTRISCDACGRLLGYVYDDGPPAMDGTGQFGMGPSQVIPRRPRYRIKTKAVTV 128
>gi|357120825|ref|XP_003562125.1| PREDICTED: uncharacterized protein LOC100826003 [Brachypodium
distachyon]
Length = 146
Score = 179 bits (453), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 77/116 (66%), Positives = 93/116 (80%)
Query: 5 YSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDYW 64
Y C CG +LNL+++HLYPA VYF AGNKGTLSF+ D ++ RL ED+IRPFFETLDYW
Sbjct: 14 YGCAACGADLNLSSAHLYPAGVYFEAGNKGTLSFSWADESRLRLAAEDRIRPFFETLDYW 73
Query: 65 GIQRKRTKIKCNNCGALLGYIYDDGPPAVDTPGQFHFGPSQVIPRYPRYRLKTKAL 120
GIQRKRT+I C+ CG LLG++YDDGPP ++ GQF GPSQV+PR PRYR K KA+
Sbjct: 74 GIQRKRTRISCDACGRLLGHVYDDGPPVMEGTGQFGMGPSQVVPRRPRYRFKIKAV 129
>gi|242042319|ref|XP_002468554.1| hypothetical protein SORBIDRAFT_01g047900 [Sorghum bicolor]
gi|92429674|gb|ABE77207.1| unknown [Sorghum bicolor]
gi|241922408|gb|EER95552.1| hypothetical protein SORBIDRAFT_01g047900 [Sorghum bicolor]
Length = 143
Score = 178 bits (451), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 78/118 (66%), Positives = 91/118 (77%)
Query: 3 SIYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLD 62
S Y C CG +LNL+ +HLYPA YF AGNKGTLSF+ +D ++ R ED+IRPFFETLD
Sbjct: 11 SSYGCAACGADLNLSAAHLYPADFYFEAGNKGTLSFSWVDESRLRFAPEDRIRPFFETLD 70
Query: 63 YWGIQRKRTKIKCNNCGALLGYIYDDGPPAVDTPGQFHFGPSQVIPRYPRYRLKTKAL 120
YWGIQRKRT+I C+ CG LLGY+YDDGPP + GQF GPSQVIPR PRYR K KA+
Sbjct: 71 YWGIQRKRTRISCDACGCLLGYVYDDGPPVMQGTGQFGMGPSQVIPRRPRYRFKIKAV 128
>gi|226507932|ref|NP_001143478.1| uncharacterized protein LOC100276150 [Zea mays]
gi|195621282|gb|ACG32471.1| hypothetical protein [Zea mays]
Length = 138
Score = 171 bits (434), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 76/117 (64%), Positives = 89/117 (76%)
Query: 2 ASIYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETL 61
A Y C CG LNL+ +HLYPA YF AGNKGTLSF+ +D ++ R ED+IRPFFETL
Sbjct: 6 ADSYGCAACGAPLNLSAAHLYPADFYFEAGNKGTLSFSWVDESRLRFAPEDRIRPFFETL 65
Query: 62 DYWGIQRKRTKIKCNNCGALLGYIYDDGPPAVDTPGQFHFGPSQVIPRYPRYRLKTK 118
+YWGIQRKRT+I C+ CG LLG++YDDGPPA+ GQF GPSQVIPR PRYR K K
Sbjct: 66 NYWGIQRKRTRISCDXCGHLLGHVYDDGPPAMQGTGQFGMGPSQVIPRRPRYRFKIK 122
>gi|226491282|ref|NP_001142833.1| uncharacterized protein LOC100275223 [Zea mays]
gi|195610346|gb|ACG27003.1| hypothetical protein [Zea mays]
Length = 139
Score = 170 bits (430), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 75/117 (64%), Positives = 89/117 (76%)
Query: 2 ASIYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETL 61
A Y C CG L+L+ +HLYPA YF AGNKGTLSF+ +D ++ R ED+IRPFFETL
Sbjct: 6 ADSYGCAACGALLDLSAAHLYPADFYFEAGNKGTLSFSWVDESRLRFAPEDRIRPFFETL 65
Query: 62 DYWGIQRKRTKIKCNNCGALLGYIYDDGPPAVDTPGQFHFGPSQVIPRYPRYRLKTK 118
+YWGIQRKRT+I C+ CG LLG++YDDGPPA+ GQF GPSQVIPR PRYR K K
Sbjct: 66 NYWGIQRKRTRISCDACGHLLGHVYDDGPPAMQGTGQFGMGPSQVIPRRPRYRFKIK 122
>gi|414864677|tpg|DAA43234.1| TPA: hypothetical protein ZEAMMB73_494522 [Zea mays]
Length = 138
Score = 169 bits (428), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 75/117 (64%), Positives = 88/117 (75%)
Query: 2 ASIYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETL 61
A Y C CG LNL+ +HLYPA YF AGNKGTLSF+ +D ++ R ED+IRPFFET
Sbjct: 6 ADSYGCAACGAPLNLSAAHLYPADFYFEAGNKGTLSFSWVDESRLRFAPEDRIRPFFETR 65
Query: 62 DYWGIQRKRTKIKCNNCGALLGYIYDDGPPAVDTPGQFHFGPSQVIPRYPRYRLKTK 118
+YWGIQRKRT+I C+ CG LLG++YDDGPPA+ GQF GPSQVIPR PRYR K K
Sbjct: 66 NYWGIQRKRTRISCDACGHLLGHVYDDGPPAMQGTGQFGMGPSQVIPRRPRYRFKIK 122
>gi|326516214|dbj|BAJ88130.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 145
Score = 162 bits (410), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 71/108 (65%), Positives = 85/108 (78%)
Query: 13 NLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDYWGIQRKRTK 72
+LNL+ SHLYPA YF AGNKGTLSF+ D ++ R ED+IRPFFETLDYWGI RKRT+
Sbjct: 20 DLNLSASHLYPAGTYFEAGNKGTLSFSWADESRLRFAAEDRIRPFFETLDYWGIHRKRTR 79
Query: 73 IKCNNCGALLGYIYDDGPPAVDTPGQFHFGPSQVIPRYPRYRLKTKAL 120
I C+ CG LLG++YDDGPP ++ GQ GPSQVIPR PRYR+K KA+
Sbjct: 80 ISCDACGKLLGHVYDDGPPVMEGTGQLGMGPSQVIPRRPRYRIKVKAV 127
>gi|302814198|ref|XP_002988783.1| hypothetical protein SELMODRAFT_229401 [Selaginella moellendorffii]
gi|300143354|gb|EFJ10045.1| hypothetical protein SELMODRAFT_229401 [Selaginella moellendorffii]
Length = 135
Score = 160 bits (406), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 75/121 (61%), Positives = 91/121 (75%), Gaps = 1/121 (0%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
++SC CG LNL+ S++YPA YF AGNKGT+SF ID TKFR E++ +I PFFET+D+
Sbjct: 5 VFSCVCCGALLNLDPSNVYPADTYFEAGNKGTISFTAIDDTKFRQERDKRIFPFFETIDH 64
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGPPAVDTP-GQFHFGPSQVIPRYPRYRLKTKALRI 122
WGIQR R K+ C +CG L+GYIY DGP D P GQ+ FGPSQV+PR PRYRLK KAL
Sbjct: 65 WGIQRDRIKLLCISCGKLVGYIYKDGPAITDNPTGQYGFGPSQVVPRLPRYRLKIKALHQ 124
Query: 123 S 123
S
Sbjct: 125 S 125
>gi|168032471|ref|XP_001768742.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680034|gb|EDQ66474.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 187
Score = 145 bits (366), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 68/121 (56%), Positives = 86/121 (71%)
Query: 3 SIYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLD 62
+IY CK C LNL+ +L+P YF AGNKGTLSF+ +D T FR ++++ PFFETLD
Sbjct: 66 TIYYCKGCNRCLNLSDEYLFPPNAYFDAGNKGTLSFSAVDKTDFRQKEDNSCFPFFETLD 125
Query: 63 YWGIQRKRTKIKCNNCGALLGYIYDDGPPAVDTPGQFHFGPSQVIPRYPRYRLKTKALRI 122
WG+QR RTK+ C CG LGYIY DGP A GQ+ G +Q+IPR+PRYRLK +A+RI
Sbjct: 126 SWGLQRHRTKLTCAACGKRLGYIYYDGPYAEGGIGQYGLGHTQMIPRHPRYRLKREAMRI 185
Query: 123 S 123
S
Sbjct: 186 S 186
>gi|168010594|ref|XP_001757989.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690866|gb|EDQ77231.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 232
Score = 139 bits (350), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 67/121 (55%), Positives = 86/121 (71%), Gaps = 1/121 (0%)
Query: 3 SIYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLD 62
+I SC+ C LNL+ LYP YF AGNKGT+SF+ +D T FR ++++K PFFETLD
Sbjct: 112 TILSCRGCNRCLNLSDEFLYPPKTYFEAGNKGTVSFSAVDKTDFRQKEQNKCFPFFETLD 171
Query: 63 YWGIQRKRTKIKCNNCGALLGYIYDDGPPAVDTPGQFHFGPSQVIPRYPRYRLKTKALRI 122
YWG +R+RTK+ C CG LGYIY D PA GQ FG SQ++PR+PRYR+K +A+RI
Sbjct: 172 YWGFRRRRTKLTCGACGKHLGYIYYD-VPAEPEIGQGGFGHSQMVPRHPRYRMKREAIRI 230
Query: 123 S 123
S
Sbjct: 231 S 231
>gi|168006833|ref|XP_001756113.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692623|gb|EDQ78979.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 264
Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 66/119 (55%), Positives = 84/119 (70%), Gaps = 1/119 (0%)
Query: 5 YSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDYW 64
+SC+ C LNLN L+P YF AGNKGT+SF +D+T FR ++++K PFFETLD+W
Sbjct: 139 FSCRGCNRCLNLNDEFLFPPNAYFEAGNKGTVSFWAVDNTDFRQKEQNKCFPFFETLDHW 198
Query: 65 GIQRKRTKIKCNNCGALLGYIYDDGPPAVDTPGQFHFGPSQVIPRYPRYRLKTKALRIS 123
G +R+RTK+ C CG LGYIYDD P+ GQ FG SQV+PR RYR+K KA+RIS
Sbjct: 199 GFRRRRTKLTCAACGNRLGYIYDD-VPSEHGIGQGGFGYSQVVPRRLRYRMKRKAIRIS 256
>gi|125584835|gb|EAZ25499.1| hypothetical protein OsJ_09322 [Oryza sativa Japonica Group]
Length = 140
Score = 95.5 bits (236), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 40/62 (64%), Positives = 47/62 (75%)
Query: 5 YSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDYW 64
Y C ECG +LNL + LYP VYF AGNKGTLSF+ +D ++ R EDKIRPFFETL+YW
Sbjct: 11 YRCAECGADLNLTAAQLYPEGVYFEAGNKGTLSFSWVDESRLRFAPEDKIRPFFETLNYW 70
Query: 65 GI 66
GI
Sbjct: 71 GI 72
>gi|302774318|ref|XP_002970576.1| hypothetical protein SELMODRAFT_441180 [Selaginella
moellendorffii]
gi|300162092|gb|EFJ28706.1| hypothetical protein SELMODRAFT_441180 [Selaginella
moellendorffii]
Length = 195
Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 3/84 (3%)
Query: 5 YSCKECGTNLNLNTSHLYPATV---YFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETL 61
YSC C LNL++S ++ Y KG L F ID ++FR+ E K P+FE+
Sbjct: 14 YSCGRCAFKLNLSSSDRLITSIGPRYSKTSRKGILYFLSIDESRFRMLDEVKCGPYFESP 73
Query: 62 DYWGIQRKRTKIKCNNCGALLGYI 85
WGIQR +T++ C CGA +G++
Sbjct: 74 GKWGIQRMQTRLLCRQCGATIGHL 97
>gi|302769992|ref|XP_002968415.1| hypothetical protein SELMODRAFT_409213 [Selaginella
moellendorffii]
gi|300164059|gb|EFJ30669.1| hypothetical protein SELMODRAFT_409213 [Selaginella
moellendorffii]
Length = 195
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 3/84 (3%)
Query: 5 YSCKECGTNLNLNTSHLYPATV---YFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETL 61
YSC C LNL++S ++ Y KG L F ID ++FR+ E K P+FE+
Sbjct: 14 YSCGRCAFKLNLSSSDRLITSIGPRYSKTSRKGILYFLSIDESRFRMLDEVKCGPYFESP 73
Query: 62 DYWGIQRKRTKIKCNNCGALLGYI 85
WGIQR +T++ C CGA +G++
Sbjct: 74 GKWGIQRMQTRLLCRQCGATIGHL 97
>gi|413945661|gb|AFW78310.1| hypothetical protein ZEAMMB73_684979 [Zea mays]
Length = 308
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 60/124 (48%), Gaps = 6/124 (4%)
Query: 5 YSCKECGTNLNLNTSHLYPATVYFPAGN---KGTLSFAMIDSTKFRLEKEDKIRPFFETL 61
YSC CG LNL++S A + G KG +SF ID ++F E P+F +
Sbjct: 180 YSCGYCGFALNLSSSTRNTANIGSKYGKHIRKGVVSFFAIDESRFTQADEVSCTPYFRSS 239
Query: 62 DYWGIQRKRTKIKCNNCGALLGYIYDDGPPAVDTPGQFHFGPSQVIPRYPRYRLKTKALR 121
WG R RT++ C CG G+ Y+D PA D S PR +Y +K ALR
Sbjct: 240 RSWGFFRNRTRLLCRKCGGHTGHAYEDEGPADDL--DMSSRGSSTSPR-KKYVIKISALR 296
Query: 122 ISTE 125
S++
Sbjct: 297 PSSD 300
>gi|226500622|ref|NP_001144678.1| uncharacterized protein LOC100277705 [Zea mays]
gi|195645598|gb|ACG42267.1| hypothetical protein [Zea mays]
Length = 153
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 5 YSCKECGTNLNLNTSHLYPATVYFPAGN---KGTLSFAMIDSTKFRLEKEDKIRPFFETL 61
YSC CG LNL++S A + G KG +SF ID ++F E P+F +
Sbjct: 16 YSCGYCGFALNLSSSTRNTANIGSKYGKHIRKGVVSFFAIDESRFTQADEVSCTPYFRSS 75
Query: 62 DYWGIQRKRTKIKCNNCGALLGYIYDDGPPAVDTPG 97
WG R RT++ C CG GY Y+D PA+ G
Sbjct: 76 RSWGFFRNRTRLLCRKCGGHTGYAYEDEGPALRDEG 111
>gi|115464375|ref|NP_001055787.1| Os05g0466700 [Oryza sativa Japonica Group]
gi|49328064|gb|AAT58764.1| unknown protein [Oryza sativa Japonica Group]
gi|49328087|gb|AAT58786.1| unknown protein [Oryza sativa Japonica Group]
gi|113579338|dbj|BAF17701.1| Os05g0466700 [Oryza sativa Japonica Group]
gi|125552650|gb|EAY98359.1| hypothetical protein OsI_20270 [Oryza sativa Indica Group]
gi|222631888|gb|EEE64020.1| hypothetical protein OsJ_18849 [Oryza sativa Japonica Group]
Length = 152
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 60/126 (47%), Gaps = 5/126 (3%)
Query: 5 YSCKECGTNLNLNTSHLYPATV---YFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETL 61
YSC CG LNL++S A + Y KG +SF ID ++F E P+F +
Sbjct: 19 YSCGYCGYALNLSSSTRNTANIGSKYGKQIRKGVISFFAIDESRFTQTDEVSCMPYFHSR 78
Query: 62 DYWGIQRKRTKIKCNNCGALLGYIYDDGPPAV-DTPGQFHFGPSQ-VIPRYPRYRLKTKA 119
WG+ RKRT++ C CG +G Y+D + D H + +Y +K A
Sbjct: 79 RSWGLFRKRTRLICRKCGGRIGNAYEDEDSTLYDGSDDLHMSSEGYSMSSGKKYVIKINA 138
Query: 120 LRISTE 125
L+ ST+
Sbjct: 139 LQPSTD 144
>gi|188509925|gb|ACD56614.1| predicted protein [Gossypioides kirkii]
Length = 218
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 64/126 (50%), Gaps = 11/126 (8%)
Query: 6 SCKECGTNLNLNTSHLYPATV---YFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLD 62
SC CG LNL++S AT+ Y + +G +SF ID ++F E + P+F +
Sbjct: 9 SCGSCGYELNLSSSSRNTATIGSKYGKSIKRGIISFFSIDESRFTQVDEFQCVPYF-SRH 67
Query: 63 YWGIQRKRTKIKCNNCGALLGYIYDDG----PPAVDTPGQFHFGPSQVIPRYPRYRLKTK 118
WG+ R RTK+ C CG +G YD+ P +D PS + + +Y ++ +
Sbjct: 68 SWGLFRHRTKLLCRKCGNHIGNAYDEKTSGYPLVLDKSNS---SPSNEVSSHRKYNVRIR 124
Query: 119 ALRIST 124
AL+ S+
Sbjct: 125 ALQPSS 130
>gi|357133314|ref|XP_003568271.1| PREDICTED: uncharacterized protein At4g08330, chloroplastic-like
[Brachypodium distachyon]
Length = 147
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 60/125 (48%), Gaps = 7/125 (5%)
Query: 5 YSCKECGTNLNLNTSHLYPATV---YFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETL 61
YSC CG LNL++S A + Y KG +SF ID ++F E P+F +
Sbjct: 18 YSCGYCGYALNLSSSTRNTANIGSKYGKQIRKGVVSFFAIDESRFTQTDEVSCMPYFRSR 77
Query: 62 DYWGIQRKRTKIKCNNCGALLGYIYDD-GPPAVDTPGQFHFGPSQVIPRYPRYRLKTKAL 120
WG RKRT++ C CG +G Y+D P D+ H + +Y +K AL
Sbjct: 78 CSWGFFRKRTRLLCRKCGGHIGDSYEDKDSPLYDSLDDTHLSSAGSRKKYV---IKINAL 134
Query: 121 RISTE 125
+ S++
Sbjct: 135 QPSSD 139
>gi|115440865|ref|NP_001044712.1| Os01g0833400 [Oryza sativa Japonica Group]
gi|56202318|dbj|BAD73777.1| unknown protein [Oryza sativa Japonica Group]
gi|113534243|dbj|BAF06626.1| Os01g0833400 [Oryza sativa Japonica Group]
gi|125528273|gb|EAY76387.1| hypothetical protein OsI_04318 [Oryza sativa Indica Group]
gi|125572533|gb|EAZ14048.1| hypothetical protein OsJ_03973 [Oryza sativa Japonica Group]
gi|215706298|dbj|BAG93154.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215741037|dbj|BAG97532.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 157
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
Query: 5 YSCKECGTNLNLNTSHLYPATV---YFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETL 61
YSC CG LNL++S A + Y KG +SF +D ++F E P+F +
Sbjct: 16 YSCGYCGYALNLSSSTRNTANIGSKYGKQIKKGVVSFFAVDESRFTQADEVTCVPYFHSR 75
Query: 62 DYWGIQRKRTKIKCNNCGALLGYIYDDGPPAV 93
WG+ R+R+++ C CG +G Y++ PA
Sbjct: 76 RSWGLFRRRSRLLCRKCGGRIGSAYEEDEPAA 107
>gi|242090815|ref|XP_002441240.1| hypothetical protein SORBIDRAFT_09g022930 [Sorghum bicolor]
gi|241946525|gb|EES19670.1| hypothetical protein SORBIDRAFT_09g022930 [Sorghum bicolor]
Length = 149
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 59/127 (46%), Gaps = 7/127 (5%)
Query: 5 YSCKECGTNLNLNTSHLYPATVYFPAGN---KGTLSFAMIDSTKFRLEKEDKIRPFFETL 61
YSC CG LNL++S A + G KG +SF ID ++F E P+F +
Sbjct: 16 YSCGYCGYALNLSSSARNTANIGSKYGKHIRKGVVSFFAIDESRFTQTDEVSCTPYFHSS 75
Query: 62 DYWGIQRKRTKIKCNNCGALLGYIYDDGPPAV-DTPGQFHFGP--SQVIPRYPRYRLKTK 118
WG R RT++ C C +G Y+D P + D S PR +Y +K
Sbjct: 76 HSWGFFRNRTRLLCRKCSGHIGNAYEDEDPTLCDGSDDLDMSSKGSSTSPR-KKYVIKIN 134
Query: 119 ALRISTE 125
AL+ S++
Sbjct: 135 ALQPSSD 141
>gi|242054887|ref|XP_002456589.1| hypothetical protein SORBIDRAFT_03g038930 [Sorghum bicolor]
gi|241928564|gb|EES01709.1| hypothetical protein SORBIDRAFT_03g038930 [Sorghum bicolor]
Length = 184
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 4/94 (4%)
Query: 5 YSCKECGTNLNLNTSHLYPATV----YFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFET 60
YSC CG LNL++S + Y KG ++F +D T+F L E P+F +
Sbjct: 29 YSCGYCGYALNLSSSARDTEGIGCSKYRKQIKKGVVAFVAVDETRFTLADEVTCMPYFRS 88
Query: 61 LDYWGIQRKRTKIKCNNCGALLGYIYDDGPPAVD 94
WG+ R+R ++ C CG +G Y++ A D
Sbjct: 89 ARSWGLFRRRARLLCRKCGGRIGNAYEEEDDARD 122
>gi|224081074|ref|XP_002306286.1| predicted protein [Populus trichocarpa]
gi|118485259|gb|ABK94489.1| unknown [Populus trichocarpa]
gi|222855735|gb|EEE93282.1| predicted protein [Populus trichocarpa]
Length = 162
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 49/87 (56%), Gaps = 3/87 (3%)
Query: 5 YSCKECGTNLNLNTSHLYPATV---YFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETL 61
YSC CG LNLN+ + + Y + KG++SF ID T+F +E + P+F ++
Sbjct: 29 YSCGSCGYQLNLNSCNRNTPDIGVNYKKSIKKGSISFFSIDETRFTQIEELRCTPYFNSM 88
Query: 62 DYWGIQRKRTKIKCNNCGALLGYIYDD 88
WG+ ++RTK+ C CG LG Y +
Sbjct: 89 RSWGLFQRRTKLLCYKCGNHLGIAYKE 115
>gi|255567198|ref|XP_002524580.1| conserved hypothetical protein [Ricinus communis]
gi|223536133|gb|EEF37788.1| conserved hypothetical protein [Ricinus communis]
Length = 122
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 59/124 (47%), Gaps = 13/124 (10%)
Query: 5 YSCKECGTNLNLNTSHLYPATV---YFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETL 61
YSC CG LNL++S+ +++ Y + KG +SF +D ++F E P
Sbjct: 8 YSCGSCGYPLNLSSSNRITSSIDSEYRKSIKKGYISFLSVDLSRFTQVDEVNCIPL---- 63
Query: 62 DYWGIQRKRTKIKCNNCGALLGYIYDDGPPAVDTPGQFHFGPSQVIPRYPRYRLKTKALR 121
YWG R +TK+ C CG +GY Y D P PS Y ++ +K +AL+
Sbjct: 64 -YWGRYRSKTKLLCRKCGVHIGYGYGDSPALCGFD-----SPSSSNSAYKKFTIKIRALQ 117
Query: 122 ISTE 125
S E
Sbjct: 118 PSEE 121
>gi|255640660|gb|ACU20615.1| unknown [Glycine max]
Length = 158
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 66/127 (51%), Gaps = 9/127 (7%)
Query: 5 YSCKECGTNLNLNTSHLYPATV---YFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETL 61
YSC CG LNL++S+ A++ Y + +G +SF ID ++F E + P F+
Sbjct: 26 YSCGTCGYELNLSSSNRNTASIGSKYGKSIKRGIISFFSIDLSRFTQVDEIQCVPHFDKH 85
Query: 62 DYWGIQRKRTKIKCNNCGALLGYIYD---DGPPAVDTPGQFHFGPSQVIPRYPRYRLKTK 118
WG+ R+RTK+ C CG+ +G Y+ P V + PS + + +Y ++ +
Sbjct: 86 S-WGLFRRRTKLLCRKCGSHIGNAYNGYTSSFPLVTDGAE--SSPSSKVVSHTKYDIRIR 142
Query: 119 ALRISTE 125
AL+ S+
Sbjct: 143 ALQPSSS 149
>gi|357125732|ref|XP_003564544.1| PREDICTED: uncharacterized protein At4g08330, chloroplastic-like
[Brachypodium distachyon]
Length = 162
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 4/105 (3%)
Query: 5 YSCKECGTNLNLNTSHLYPA----TVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFET 60
YSC CG LNL +S A T Y KG ++F +D T+F E P F +
Sbjct: 17 YSCGYCGYALNLCSSARNTAGIGSTKYGKQIKKGVVAFLAVDETRFTRADEVTCAPHFRS 76
Query: 61 LDYWGIQRKRTKIKCNNCGALLGYIYDDGPPAVDTPGQFHFGPSQ 105
WG+ R+R+++ C CG +G +Y++ D+ +G S
Sbjct: 77 ARSWGLFRRRSRLLCRKCGGRIGAVYEEEKEEDDSAVLSEYGGSD 121
>gi|357463497|ref|XP_003602030.1| hypothetical protein MTR_3g088030 [Medicago truncatula]
gi|355491078|gb|AES72281.1| hypothetical protein MTR_3g088030 [Medicago truncatula]
Length = 176
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 68/130 (52%), Gaps = 11/130 (8%)
Query: 5 YSCKECGTNLNLNTSHLYPATV---YFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETL 61
YSC CG +LNL++S+ +++ Y + +G +SF ID ++F E + P F +
Sbjct: 38 YSCGSCGYDLNLSSSNRNTSSIDSKYGKSIKRGIISFFNIDDSRFTQVDEIECAPHF-SK 96
Query: 62 DYWGIQRKRTKIKCNNCGALLGYIYDDGPPA------VDTPGQFHFGPSQVIPRYPRYRL 115
+ WG+ R++TK+ C C +GY Y+ + V + G PS P + +Y +
Sbjct: 97 NLWGLFRRKTKLLCRKCCNHIGYAYNGNNSSSPSFILVSSNGA-EPSPSTEAPTHVKYNI 155
Query: 116 KTKALRISTE 125
+ +AL+ S+
Sbjct: 156 RIRALQPSSS 165
>gi|356549224|ref|XP_003542997.1| PREDICTED: uncharacterized protein At4g08330, chloroplastic-like
[Glycine max]
Length = 158
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 65/127 (51%), Gaps = 9/127 (7%)
Query: 5 YSCKECGTNLNLNTSHLYPATV---YFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETL 61
YSC CG LNL++S+ A++ Y + +G +SF ID ++F E + P F+
Sbjct: 26 YSCGTCGYELNLSSSNRNTASIGSKYGKSIKRGIISFFSIDLSRFTQVDEIQCVPHFDKH 85
Query: 62 DYWGIQRKRTKIKCNNCGALLGYIYD---DGPPAVDTPGQFHFGPSQVIPRYPRYRLKTK 118
WG+ R+RTK+ C CG +G Y+ P V + PS + + +Y ++ +
Sbjct: 86 S-WGLFRRRTKLLCRKCGNHIGNAYNGYTSSFPLVTDGAE--SSPSSKVVSHTKYDIRIR 142
Query: 119 ALRISTE 125
AL+ S+
Sbjct: 143 ALQPSSS 149
>gi|226502875|ref|NP_001145404.1| uncharacterized protein LOC100278761 [Zea mays]
gi|195655673|gb|ACG47304.1| hypothetical protein [Zea mays]
Length = 167
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 3/94 (3%)
Query: 5 YSCKECGTNLNLNTSHLYPATV---YFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETL 61
YSC CG LNL++S + Y KG ++F +D ++F L E P+F +
Sbjct: 16 YSCGYCGYALNLSSSARDTEGIGPKYRKQIRKGVVAFVAVDESRFTLAHELTCTPYFRSA 75
Query: 62 DYWGIQRKRTKIKCNNCGALLGYIYDDGPPAVDT 95
WG+ R+R+++ C CG +G Y G D
Sbjct: 76 RSWGLFRRRSRLLCRKCGGHIGSAYGYGEEEEDA 109
>gi|225438335|ref|XP_002272466.1| PREDICTED: uncharacterized protein At4g08330, chloroplastic [Vitis
vinifera]
gi|296082623|emb|CBI21628.3| unnamed protein product [Vitis vinifera]
Length = 154
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 5 YSCKECGTNLNLNTSHLYP--ATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLD 62
YSC CG LNLN+ + + Y + KG +SF ID T+F E + P+F +
Sbjct: 28 YSCGSCGYQLNLNSCNRTSVLGSKYEKSIKKGIISFFSIDETRFTQTNELRCLPYFNSRC 87
Query: 63 YWGIQRKRTKIKCNNCGALLGYIY 86
WG+ R+R+K+ C CG +G Y
Sbjct: 88 SWGLFRRRSKLLCKKCGNHIGNAY 111
>gi|224063084|ref|XP_002300988.1| predicted protein [Populus trichocarpa]
gi|222842714|gb|EEE80261.1| predicted protein [Populus trichocarpa]
Length = 159
Score = 58.5 bits (140), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 4/91 (4%)
Query: 5 YSCKECGTNLNLNTSHLYPATV---YFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETL 61
YSC CG LNL++S+ +++ Y + +G +SF ID ++F E + PFF +
Sbjct: 27 YSCGICGYELNLSSSNRNTSSIGSKYGKSIKRGIISFFFIDESRFTQVDEFQCIPFF-SR 85
Query: 62 DYWGIQRKRTKIKCNNCGALLGYIYDDGPPA 92
+ WG+ +RT + C CG +G YDD A
Sbjct: 86 NSWGLFHRRTALLCRKCGNNIGIAYDDKASA 116
>gi|413952028|gb|AFW84677.1| hypothetical protein ZEAMMB73_646060 [Zea mays]
Length = 163
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 5 YSCKECGTNLNLNTSHLYPATV---YFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETL 61
YSC CG LNL++S + Y KG ++F +D ++F L E P+F +
Sbjct: 16 YSCGYCGYALNLSSSARDTEGIGPKYRKQIRKGVVAFVAVDESRFTLAHELTCTPYFRSA 75
Query: 62 DYWGIQRKRTKIKCNNCGALLGYIY 86
WG+ R+R+++ C CG +G Y
Sbjct: 76 RSWGLFRRRSRLLCRKCGGHIGSAY 100
>gi|356552677|ref|XP_003544689.1| PREDICTED: uncharacterized protein At4g08330, chloroplastic-like
[Glycine max]
Length = 158
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 64/127 (50%), Gaps = 9/127 (7%)
Query: 5 YSCKECGTNLNLNTSHLYPATV---YFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETL 61
YSC CG LNL++S+ A++ Y + +G +SF ID ++F E + P F+
Sbjct: 26 YSCGTCGYELNLSSSNRNTASIGSKYGKSIKRGIISFFSIDLSRFTQVDEIQCVPHFDKH 85
Query: 62 DYWGIQRKRTKIKCNNCGALLGYIYD---DGPPAVDTPGQFHFGPSQVIPRYPRYRLKTK 118
WG+ R+RTK+ C CG +G Y+ P V + PS + + +Y ++
Sbjct: 86 S-WGLFRRRTKLLCRKCGNHIGNAYNGYTSSFPLVSDGAE--SSPSSKVVSHTKYDIRIC 142
Query: 119 ALRISTE 125
AL+ S+
Sbjct: 143 ALQPSSS 149
>gi|118484948|gb|ABK94339.1| unknown [Populus trichocarpa]
Length = 164
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 65/125 (52%), Gaps = 7/125 (5%)
Query: 5 YSCKECGTNLNLNTSHLYPATV---YFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETL 61
YSC CG LNL++S+ +T+ Y + +G +SF ID ++F E + PFF +
Sbjct: 32 YSCGICGYELNLSSSNRNTSTIGSKYGKSIKRGKISFFFIDESRFTQVDEFQCFPFF-SK 90
Query: 62 DYWGIQRKRTKIKCNNCGALLGYIYDDGPPA--VDTPGQFHFGPSQVIPRYPRYRLKTKA 119
+ G+ R+RT + C CG +G Y D A + G S+V R +Y +K +A
Sbjct: 91 NSLGLFRQRTALLCRKCGNHIGIAYADEASAYPLVADGSDSSSVSEVFKR-RKYDVKIRA 149
Query: 120 LRIST 124
L+ S+
Sbjct: 150 LQPSS 154
>gi|255545404|ref|XP_002513762.1| conserved hypothetical protein [Ricinus communis]
gi|223546848|gb|EEF48345.1| conserved hypothetical protein [Ricinus communis]
Length = 191
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 61/121 (50%), Gaps = 4/121 (3%)
Query: 7 CKECGTNLNLNTSHLYPATV---YFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
C CG LNL++S+ +T+ Y + +G +SF ID ++F +E + P+F +
Sbjct: 62 CGTCGYELNLSSSNRNTSTIGSKYGKSIKRGIISFFDIDESRFTQAEEFQCIPYF-SKSS 120
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGPPAVDTPGQFHFGPSQVIPRYPRYRLKTKALRIS 123
WG R+RTK+ C CG +G Y+D A S + +Y +K +AL+ S
Sbjct: 121 WGFFRRRTKLLCRKCGNYIGIAYEDETSAYPLVSDGSDSSSVNESKRRKYDIKIRALQPS 180
Query: 124 T 124
+
Sbjct: 181 S 181
>gi|255647519|gb|ACU24223.1| unknown [Glycine max]
Length = 158
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 63/127 (49%), Gaps = 9/127 (7%)
Query: 5 YSCKECGTNLNLNTSHLYPATV---YFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETL 61
YSC CG LNL +S+ A++ Y + +G +SF ID ++F E + P F+
Sbjct: 26 YSCGTCGYELNLFSSNRNTASIGSKYGKSIKRGIISFFSIDLSRFTQVDEIQCVPHFDKH 85
Query: 62 DYWGIQRKRTKIKCNNCGALLGYIYD---DGPPAVDTPGQFHFGPSQVIPRYPRYRLKTK 118
WG+ R+RTK+ C CG +G Y+ P V + PS + + +Y ++
Sbjct: 86 S-WGLFRRRTKLLCRKCGNHIGNAYNGYTSSFPLVSDGAE--SSPSSKVVSHTKYDIRIC 142
Query: 119 ALRISTE 125
AL+ S+
Sbjct: 143 ALQPSSS 149
>gi|449500695|ref|XP_004161170.1| PREDICTED: uncharacterized protein At4g08330, chloroplastic-like
[Cucumis sativus]
Length = 168
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 64/126 (50%), Gaps = 8/126 (6%)
Query: 5 YSCKECGTNLNLNTSHLYPATV---YFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETL 61
YSC CG LNL++ + +T+ Y + +G +SF ID ++F E + P F +
Sbjct: 36 YSCGACGYELNLSSINRNTSTIGSKYGKSIKRGIISFLNIDESRFTQVDELQCVPHF-SK 94
Query: 62 DYWGIQRKRTKIKCNNCGALLGYIYDD---GPPAVDTPGQFHFGPSQVIPRYPRYRLKTK 118
+ WG+ R+R K+ C CG +G + + P V P++V R +Y +K +
Sbjct: 95 NSWGLFRRRIKLLCRKCGNYIGNAHSNHTASSPLVSDGSDSSSLPNEV-SRCMKYEVKIR 153
Query: 119 ALRIST 124
AL+ S+
Sbjct: 154 ALQPSS 159
>gi|413952029|gb|AFW84678.1| hypothetical protein ZEAMMB73_646060 [Zea mays]
Length = 228
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Query: 6 SCKECGTNLNLNTSHLYPATV---YFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLD 62
SC CG LNL++S + Y KG ++F +D ++F L E P+F +
Sbjct: 82 SCGYCGYALNLSSSARDTEGIGPKYRKQIRKGVVAFVAVDESRFTLAHELTCTPYFRSAR 141
Query: 63 YWGIQRKRTKIKCNNCGALLGYIY 86
WG+ R+R+++ C CG +G Y
Sbjct: 142 SWGLFRRRSRLLCRKCGGHIGSAY 165
>gi|224084884|ref|XP_002307435.1| predicted protein [Populus trichocarpa]
gi|222856884|gb|EEE94431.1| predicted protein [Populus trichocarpa]
Length = 121
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 63/123 (51%), Gaps = 7/123 (5%)
Query: 7 CKECGTNLNLNTSHLYPATV---YFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
C CG LNL++S+ +T+ Y + +G +SF ID ++F E + PFF + +
Sbjct: 1 CGICGYELNLSSSNRNTSTIGSKYGKSIKRGKISFFFIDESRFTQVDEFQCFPFF-SKNS 59
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGPPA--VDTPGQFHFGPSQVIPRYPRYRLKTKALR 121
G+ R+RT + C CG +G Y D A + G S+V R +Y +K +AL+
Sbjct: 60 LGLFRQRTALLCRKCGNHIGIAYADEASAYPLVADGSDSSSVSEVFKR-RKYDVKIRALQ 118
Query: 122 IST 124
S+
Sbjct: 119 PSS 121
>gi|388520365|gb|AFK48244.1| unknown [Lotus japonicus]
Length = 165
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 62/130 (47%), Gaps = 9/130 (6%)
Query: 5 YSCKECGTNLNLNTSHLYPATV----YFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFET 60
YSC CG LNL++S+ +++ Y + +G + F ID ++F E + P F
Sbjct: 28 YSCGTCGYELNLSSSNRNTSSIGSTKYGKSIKRGIIPFFNIDDSRFTQVDEIECAPHFSK 87
Query: 61 LDYWGIQRKRTKIKCNNCGALLGYIYD----DGPPAVDTPGQFHFGPSQVIPRYPRYRLK 116
WG+ R++TK+ C C +G YD P V + G + P +Y ++
Sbjct: 88 HS-WGLFRRKTKLLCRKCCNYIGNAYDGYTSSSFPLVVSNGTESSPAATESPNQAKYNIR 146
Query: 117 TKALRISTET 126
+AL+ S+ +
Sbjct: 147 IRALQPSSSS 156
>gi|222615806|gb|EEE51938.1| hypothetical protein OsJ_33565 [Oryza sativa Japonica Group]
Length = 123
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 64/127 (50%), Gaps = 15/127 (11%)
Query: 4 IYSCKECGTNLNLNTSHLYPATV---YFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFET 60
+YSC CG LNL++S+ + V Y + KG +SF +D ++F + D+I F T
Sbjct: 7 VYSCGSCGYPLNLSSSNRSTSDVGSSYQKSVKKGLISFITVDLSRF--TQVDEISCFPLT 64
Query: 61 LDYWGIQRKRTKIKCNNCGALLGYIYDDGPPAVDTPGQFHFGPS-QVIPRYPRYRLKTKA 119
W R +TK+ C CGA +GY Y G PAV F P+ +Y +K +A
Sbjct: 65 ---WRSYRPKTKLLCRKCGASIGYGY--GEPAV----LCSFDPASSSSSTSQKYLIKIQA 115
Query: 120 LRISTET 126
L+ S T
Sbjct: 116 LQPSDST 122
>gi|218185543|gb|EEC67970.1| hypothetical protein OsI_35724 [Oryza sativa Indica Group]
Length = 123
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 64/127 (50%), Gaps = 15/127 (11%)
Query: 4 IYSCKECGTNLNLNTSHLYPATV---YFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFET 60
+YSC CG LNL++S+ + V Y + KG +SF +D ++F + D+I F T
Sbjct: 7 VYSCGSCGYPLNLSSSNRSTSGVGSSYQKSVKKGLISFITVDLSRF--TQVDEISCFPLT 64
Query: 61 LDYWGIQRKRTKIKCNNCGALLGYIYDDGPPAVDTPGQFHFGPS-QVIPRYPRYRLKTKA 119
W R +TK+ C CGA +GY Y G PAV F P+ +Y +K +A
Sbjct: 65 ---WRSYRPKTKLLCRKCGASIGYGY--GEPAVLC----SFDPASSSSSTSQKYLIKIQA 115
Query: 120 LRISTET 126
L+ S T
Sbjct: 116 LQPSDST 122
>gi|297813291|ref|XP_002874529.1| hypothetical protein ARALYDRAFT_489746 [Arabidopsis lyrata subsp.
lyrata]
gi|297320366|gb|EFH50788.1| hypothetical protein ARALYDRAFT_489746 [Arabidopsis lyrata subsp.
lyrata]
Length = 161
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 56/123 (45%), Gaps = 4/123 (3%)
Query: 5 YSCKECGTNLNLNTSHLYPATV---YFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETL 61
YSC CG LNL++++ +T+ Y + G +SF ID +F E + P F
Sbjct: 35 YSCGSCGYELNLSSTNRITSTIGSKYGKSMKSGIISFFNIDEGRFSQVDEFQCMPHFSRY 94
Query: 62 DYWGIQRKRTKIKCNNCGALLGYIYDDGPPAVDTPGQFHFGPSQVIPRYPRYRLKTKALR 121
WG+ R RTK+ C C +G + P Q S I +Y ++ ++L+
Sbjct: 95 S-WGLFRHRTKLLCRKCNNYIGNASQEKAPEYALVTQNSDPTSPRIGSVTKYDIRIRSLQ 153
Query: 122 IST 124
S+
Sbjct: 154 PSS 156
>gi|15236464|ref|NP_192573.1| uncharacterized protein [Arabidopsis thaliana]
gi|75207703|sp|Q9STN5.1|Y4833_ARATH RecName: Full=Uncharacterized protein At4g08330, chloroplastic;
Flags: Precursor
gi|5731754|emb|CAB52555.1| putative protein [Arabidopsis thaliana]
gi|7267474|emb|CAB77958.1| putative protein [Arabidopsis thaliana]
gi|26450376|dbj|BAC42303.1| unknown protein [Arabidopsis thaliana]
gi|28827362|gb|AAO50525.1| unknown protein [Arabidopsis thaliana]
gi|332657227|gb|AEE82627.1| uncharacterized protein [Arabidopsis thaliana]
Length = 164
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 56/123 (45%), Gaps = 4/123 (3%)
Query: 5 YSCKECGTNLNLNTSHLYPATV---YFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETL 61
YSC CG LNL++++ +T+ Y + G +SF ID +F E + P F
Sbjct: 38 YSCGSCGYELNLSSTNRITSTIGSKYGKSMKSGIISFFNIDEGRFSQVDEFQCMPHFSRY 97
Query: 62 DYWGIQRKRTKIKCNNCGALLGYIYDDGPPAVDTPGQFHFGPSQVIPRYPRYRLKTKALR 121
WG+ R RTK+ C C +G + P Q S I +Y ++ ++L+
Sbjct: 98 S-WGLFRHRTKLLCRKCNNYIGNASQEKAPEYALVTQNSDPTSPRIGSVTKYDIRIRSLQ 156
Query: 122 IST 124
S+
Sbjct: 157 PSS 159
>gi|356515894|ref|XP_003526632.1| PREDICTED: uncharacterized protein At4g08330, chloroplastic-like
[Glycine max]
Length = 168
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 4/87 (4%)
Query: 5 YSCKECGTNLNLNTSHLYP---ATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETL 61
YSC CG LNL++S+ + Y + +G +SF +D ++F E + P+F +
Sbjct: 33 YSCGTCGYELNLSSSNRNISSIGSKYGKSIKRGIISFLNVDDSRFTRADEIEFAPYF-SK 91
Query: 62 DYWGIQRKRTKIKCNNCGALLGYIYDD 88
WG+ R++TK+ C C +GY Y+D
Sbjct: 92 HKWGLFRRKTKLLCRKCCNHIGYAYND 118
>gi|242070491|ref|XP_002450522.1| hypothetical protein SORBIDRAFT_05g006540 [Sorghum bicolor]
gi|241936365|gb|EES09510.1| hypothetical protein SORBIDRAFT_05g006540 [Sorghum bicolor]
Length = 124
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 58/125 (46%), Gaps = 12/125 (9%)
Query: 5 YSCKECGTNLNLNTSHLYPATV---YFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETL 61
YSC CG LNL++S+ + V Y + KG +SF +D ++F E P
Sbjct: 8 YSCGSCGYPLNLSSSNRSTSEVGSSYKKSLKKGLISFISVDLSRFTQVDEVSCFPLA--- 64
Query: 62 DYWGIQRKRTKIKCNNCGALLGYIYDDGPPAVDTPGQFHFGPSQVIPRYPRYRLKTKALR 121
W R +TK+ C CGA +GY Y G PAV F S +Y +K +AL+
Sbjct: 65 --WRSYRPKTKLLCRKCGASIGYGY--GEPAVLC--SFDPASSSSSSTSQKYLIKIQALQ 118
Query: 122 ISTET 126
S T
Sbjct: 119 PSDGT 123
>gi|224129308|ref|XP_002320552.1| predicted protein [Populus trichocarpa]
gi|222861325|gb|EEE98867.1| predicted protein [Populus trichocarpa]
Length = 120
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 54/123 (43%), Gaps = 13/123 (10%)
Query: 6 SCKECGTNLNLNTSHLYPATV---YFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLD 62
SC CG LNL +S+ + + Y + KG +SF +D ++F E P
Sbjct: 7 SCGSCGYPLNLTSSNRITSNIGSGYQKSIKKGYISFLSVDLSRFTQVDEVNCLPV----- 61
Query: 63 YWGIQRKRTKIKCNNCGALLGYIYDDGPPAVDTPGQFHFGPSQVIPRYPRYRLKTKALRI 122
WG ++K+ C CG +GY Y D P P+ Y ++ +K +AL+
Sbjct: 62 SWGRYHSKSKLLCRKCGVHVGYGYGDSPALCGFD-----SPNSSSSAYKKFTIKIRALQP 116
Query: 123 STE 125
S E
Sbjct: 117 SEE 119
>gi|225459562|ref|XP_002285856.1| PREDICTED: uncharacterized protein At4g08330, chloroplastic [Vitis
vinifera]
gi|302141815|emb|CBI19018.3| unnamed protein product [Vitis vinifera]
Length = 164
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 3/90 (3%)
Query: 5 YSCKECGTNLNLNTSHLYPATV---YFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETL 61
YSC CG L L +S+ + Y +G +SF +D ++F L E K P+F +
Sbjct: 27 YSCGSCGYELKLCSSNRNTKNIGSKYGKNIKRGVISFLQVDESRFTLVDEFKCIPYFISR 86
Query: 62 DYWGIQRKRTKIKCNNCGALLGYIYDDGPP 91
WG+ RTK+ C C +G Y P
Sbjct: 87 HSWGLFCHRTKLLCRKCSNHVGNAYVRKSP 116
>gi|357130038|ref|XP_003566665.1| PREDICTED: uncharacterized protein At4g08330, chloroplastic-like
[Brachypodium distachyon]
Length = 142
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 52/122 (42%), Gaps = 24/122 (19%)
Query: 2 ASIYSCKECGTNLNLNT-SHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFET 60
A Y C CG +L L++ + Y A G T++F ID +F E F
Sbjct: 21 AVTYCCGACGYDLKLSSNAREYTADGIVGRGRAATVAFGAIDDDRFGHLDE------FRC 74
Query: 61 LDYWGIQ--RKRTKIKCNNCGALLGYIYDDGPPAVDTPGQFHFGPSQVIPRYPRYRLKTK 118
LD + +RT++ C CGA LG+ YDD + R PRY +K +
Sbjct: 75 LDVRARRLFARRTRLLCRKCGAHLGFGYDD---------------TAAARRPPRYLIKIR 119
Query: 119 AL 120
AL
Sbjct: 120 AL 121
>gi|226502432|ref|NP_001144168.1| uncharacterized protein LOC100277023 [Zea mays]
gi|195637898|gb|ACG38417.1| hypothetical protein [Zea mays]
Length = 124
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 61/125 (48%), Gaps = 12/125 (9%)
Query: 5 YSCKECGTNLNLNTSHLYPATV---YFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETL 61
YSC CG LNL++S+ + V Y + KG +SF +D ++F + DK+ F T
Sbjct: 8 YSCGFCGYPLNLSSSNRSTSEVGSSYKKSLKKGLISFISVDLSRF--TQVDKVSCFPLT- 64
Query: 62 DYWGIQRKRTKIKCNNCGALLGYIYDDGPPAVDTPGQFHFGPSQVIPRYPRYRLKTKALR 121
W R +TK+ C CGA +GY Y G PA F S +Y +K +AL+
Sbjct: 65 --WRSYRPKTKLLCRKCGASIGYGY--GEPAALC--SFDPASSSSSSTSQKYLIKIQALQ 118
Query: 122 ISTET 126
S T
Sbjct: 119 PSDGT 123
>gi|351726526|ref|NP_001235338.1| uncharacterized protein LOC100527641 [Glycine max]
gi|255632838|gb|ACU16772.1| unknown [Glycine max]
Length = 161
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 5 YSCKECGTNLNLNTSHLYPATVYFPAG-NKGTLSFAMIDSTKFRLEKE---DKIRPFFET 60
YSC CG LNLN+S+ ++ +G +SF +D ++F ++ PFF +
Sbjct: 28 YSCGSCGYELNLNSSNRNTCSLIDSKSIKRGIISFFSMDESRFTQIQQLHWPSWMPFFNS 87
Query: 61 LDYWGIQRKRTKIKCNNCGALLGYIY 86
+R+RTK+ C +CG LGY Y
Sbjct: 88 ------KRQRTKLFCRSCGNHLGYAY 107
>gi|359492391|ref|XP_003634408.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
At4g08330, chloroplastic-like [Vitis vinifera]
Length = 141
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 39/88 (44%), Gaps = 3/88 (3%)
Query: 7 CKECGTNLNLNTSHLYPATVYFPAGN---KGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
C CG L L +S+ + G +G +SF +D + F L E K P+F +
Sbjct: 8 CGSCGYELKLRSSNRNTKNIGSKYGKNIKRGVISFLQVDESGFTLVDEFKCIPYFISRHS 67
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGPP 91
WG+ RT + C CG +G Y P
Sbjct: 68 WGLFCHRTXLLCRKCGNHVGNAYVRKSP 95
>gi|356511203|ref|XP_003524318.1| PREDICTED: uncharacterized protein At4g08330, chloroplastic-like
[Glycine max]
Length = 127
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 12/94 (12%)
Query: 6 SCKECGTNLNLNTSHLYPATVYFPAG-NKGTLSFAMIDSTKF----RLEKEDKIRPFFET 60
SC CG LNLN+S+ ++ +G +SF +D ++F +L I PFF +
Sbjct: 4 SCSSCGYELNLNSSNRNTCSLIDSKSIKRGIISFFSVDESRFTQIQQLHWPSWI-PFFNS 62
Query: 61 LDYWGIQRKRTKIKCNNCGALLGYIYDDGPPAVD 94
+R+RTK+ C +CG LGY Y + D
Sbjct: 63 ------KRQRTKLLCRSCGNHLGYAYTSPSQSWD 90
>gi|242089365|ref|XP_002440515.1| hypothetical protein SORBIDRAFT_09g002300 [Sorghum bicolor]
gi|241945800|gb|EES18945.1| hypothetical protein SORBIDRAFT_09g002300 [Sorghum bicolor]
Length = 149
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 52/124 (41%), Gaps = 24/124 (19%)
Query: 2 ASIYSCKECGTNLNLNTSHLYPATVYFPAGNKGTL--SFAMIDSTKFRLEKEDKIRPFFE 59
A Y C CG +L L +S A + A + L +F ID +F E F
Sbjct: 28 AVTYCCGACGYDLRLRSSDRNTAGIVGGAARRRGLVVAFDAIDDARFGHADE------FR 81
Query: 60 TLDYWGIQR--KRTKIKCNNCGALLGYIYDDGPPAVDTPGQFHFGPSQVIPRYPRYRLKT 117
+D + +RT++ C CGA LG+ YDD Q R PRY +K
Sbjct: 82 CVDLRARRLFVRRTRLLCRKCGAGLGFGYDD--------------RGQDGGRPPRYDIKI 127
Query: 118 KALR 121
+AL+
Sbjct: 128 RALQ 131
>gi|436833659|ref|YP_007318875.1| methionine-R-sulfoxide reductase [Fibrella aestuarina BUZ 2]
gi|384065072|emb|CCG98282.1| methionine-R-sulfoxide reductase [Fibrella aestuarina BUZ 2]
Length = 129
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 43/89 (48%), Gaps = 21/89 (23%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAM-IDSTKFRLEKEDKIRPFFETLD 62
+Y+C CGT L+ AT F +G G SF ID + RLEK+
Sbjct: 44 VYTCVCCGT-------ELFEATTKFESGT-GWPSFTDPIDPERIRLEKD----------- 84
Query: 63 YWGIQRKRTKIKCNNCGALLGYIYDDGPP 91
+ R ++ CN C A LG+++DDGPP
Sbjct: 85 -YSYGMYRVEVLCNVCDAHLGHVFDDGPP 112
>gi|93005523|ref|YP_579960.1| protein-methionine-S-oxide reductase [Psychrobacter cryohalolentis
K5]
gi|92393201|gb|ABE74476.1| Protein-methionine-S-oxide reductase [Psychrobacter cryohalolentis
K5]
Length = 141
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 19/87 (21%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
IY CK CG NL + + + A +P+ ++G ID++ +D +
Sbjct: 52 IYRCKGCGANL-FESDNKFDAGCGWPSFDQG------IDNSAIDEHVDDSL--------- 95
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGP 90
+RT++ C+NCGA LG+++ DGP
Sbjct: 96 ---GMRRTEVTCSNCGAHLGHVFPDGP 119
>gi|392375122|ref|YP_003206955.1| peptide methionine sulfoxide reductase msrB (Peptide-methionine
(R)-S-oxide reductase) [Candidatus Methylomirabilis
oxyfera]
gi|258592815|emb|CBE69124.1| Peptide methionine sulfoxide reductase msrB (Peptide-methionine
(R)-S-oxide reductase) (modular protein) [Candidatus
Methylomirabilis oxyfera]
Length = 205
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 24/35 (68%)
Query: 66 IQRKRTKIKCNNCGALLGYIYDDGPPAVDTPGQFH 100
+ +R +++C+ CGA LG+++ DGPP DTP H
Sbjct: 157 LSMRRIEVRCSRCGAHLGHVFHDGPPPRDTPSLLH 191
>gi|392969207|ref|ZP_10334623.1| methionine-R-sulfoxide reductase [Fibrisoma limi BUZ 3]
gi|387843569|emb|CCH56677.1| methionine-R-sulfoxide reductase [Fibrisoma limi BUZ 3]
Length = 135
Score = 42.7 bits (99), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 41/88 (46%), Gaps = 19/88 (21%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
IY+C C T L+ +T F +G A I+ + RLEK+ Y
Sbjct: 45 IYACVCCDT-------ELFESTTKFDSGTGWPSFTAPIEEERIRLEKD---------FSY 88
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGPP 91
I R ++ CN C A LG+++DDGPP
Sbjct: 89 GMI---RIEVLCNVCDAHLGHVFDDGPP 113
>gi|400287886|ref|ZP_10789918.1| protein-methionine-S-oxide reductase [Psychrobacter sp. PAMC 21119]
Length = 141
Score = 42.0 bits (97), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 47/87 (54%), Gaps = 19/87 (21%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
+Y CK CG +L ++++ + A+ +P+ ++G ID++ E +D
Sbjct: 52 VYRCKGCGASL-FDSTNKFDASCGWPSFDQG------IDNSAIE-----------EHVDN 93
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGP 90
+ RT++ C+NCGA LG+++ DGP
Sbjct: 94 -SLGMTRTEVTCSNCGAHLGHVFPDGP 119
>gi|153878977|ref|ZP_02004728.1| Protein-methionine-S-oxide reductase [Beggiatoa sp. PS]
gi|152064559|gb|EDN65272.1| Protein-methionine-S-oxide reductase [Beggiatoa sp. PS]
Length = 134
Score = 41.6 bits (96), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 39/87 (44%), Gaps = 19/87 (21%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
IY C CG + L+ A F +G +A IDS L EDK
Sbjct: 45 IYQCVCCG-------NELFSAKTKFNSGTGWPSFYAPIDSELVEL-NEDK---------- 86
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGP 90
+ RT++ C CGA LG+++DDGP
Sbjct: 87 -SLLMPRTEVLCERCGAHLGHVFDDGP 112
>gi|389775493|ref|ZP_10193434.1| methionine-R-sulfoxide reductase [Rhodanobacter spathiphylli B39]
gi|388437309|gb|EIL94115.1| methionine-R-sulfoxide reductase [Rhodanobacter spathiphylli B39]
Length = 191
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 19/90 (21%)
Query: 1 MASIYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFET 60
+A ++ C+ CGT L Y A F +G G SF + + +E+ D +
Sbjct: 99 VAGLFRCRACGTAL-------YDAATEFDSGT-GWPSFWQPIAARNVVERSDHL------ 144
Query: 61 LDYWGIQRKRTKIKCNNCGALLGYIYDDGP 90
+G+ RT I C C + LG+++DDGP
Sbjct: 145 ---FGM--TRTAISCKGCDSHLGHVFDDGP 169
>gi|237747679|ref|ZP_04578159.1| peptide methionine sulfoxide reductase [Oxalobacter formigenes
OXCC13]
gi|229379041|gb|EEO29132.1| peptide methionine sulfoxide reductase [Oxalobacter formigenes
OXCC13]
Length = 141
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 40/88 (45%), Gaps = 19/88 (21%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
+Y+C CGT L ++ + F AG FA ID R EK D
Sbjct: 46 VYTCVNCGTPLFISDTK-------FDAGCGWPSFFAPIDPENVR-EKVDV---------- 87
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGPP 91
+ RT+I C C A LG+++DDGPP
Sbjct: 88 -SLGMVRTEIICAICDAHLGHVFDDGPP 114
>gi|322514794|ref|ZP_08067817.1| methionine-R-sulfoxide reductase [Actinobacillus ureae ATCC 25976]
gi|322119256|gb|EFX91386.1| methionine-R-sulfoxide reductase [Actinobacillus ureae ATCC 25976]
Length = 131
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 24/31 (77%)
Query: 61 LDYWGIQRKRTKIKCNNCGALLGYIYDDGPP 91
LD + + R RT+I+C NC + +G++++DGPP
Sbjct: 75 LDDYSLGRHRTEIRCGNCDSHMGHVFNDGPP 105
>gi|421259026|ref|ZP_15711819.1| methionine sulfoxide reductase B [Pasteurella multocida subsp.
multocida str. Anand1_cattle]
gi|401697373|gb|EJS89726.1| methionine sulfoxide reductase B [Pasteurella multocida subsp.
multocida str. Anand1_cattle]
Length = 91
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 23/31 (74%)
Query: 61 LDYWGIQRKRTKIKCNNCGALLGYIYDDGPP 91
LD + + R RT+I+C C A LG++++DGPP
Sbjct: 35 LDDYTLSRPRTEIRCGQCDAHLGHVFEDGPP 65
>gi|407692170|ref|YP_006816959.1| methionine sulfoxide reductase B [Actinobacillus suis H91-0380]
gi|407388227|gb|AFU18720.1| methionine sulfoxide reductase B [Actinobacillus suis H91-0380]
Length = 131
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 24/31 (77%)
Query: 61 LDYWGIQRKRTKIKCNNCGALLGYIYDDGPP 91
LD + + R RT+I+C NC + +G++++DGPP
Sbjct: 75 LDDYSLGRHRTEIRCGNCDSHMGHVFNDGPP 105
>gi|284040299|ref|YP_003390229.1| methionine-R-sulfoxide reductase [Spirosoma linguale DSM 74]
gi|283819592|gb|ADB41430.1| methionine-R-sulfoxide reductase [Spirosoma linguale DSM 74]
Length = 135
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 23/90 (25%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAM-IDSTKFRLEKEDKIRPFFETLD 62
+Y+C CGT L + +T F +G G SF I+ + RLEK D
Sbjct: 45 LYACVCCGTEL-------FESTTKFESGT-GWPSFTEPIEQERVRLEK-----------D 85
Query: 63 Y-WGIQRKRTKIKCNNCGALLGYIYDDGPP 91
Y +G+ R ++ CN C A LG++++DGPP
Sbjct: 86 YSYGM--SRVEVLCNICDAHLGHVFNDGPP 113
>gi|257465503|ref|ZP_05629874.1| methionine sulfoxide reductase B [Actinobacillus minor 202]
gi|257451163|gb|EEV25206.1| methionine sulfoxide reductase B [Actinobacillus minor 202]
Length = 131
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 24/31 (77%)
Query: 61 LDYWGIQRKRTKIKCNNCGALLGYIYDDGPP 91
LD + + R RT+I+C NC + +G++++DGPP
Sbjct: 75 LDDYSLGRHRTEIRCGNCDSHMGHVFNDGPP 105
>gi|425063618|ref|ZP_18466743.1| Peptide methionine sulfoxide reductase MsrB [Pasteurella multocida
subsp. gallicida X73]
gi|404382172|gb|EJZ78633.1| Peptide methionine sulfoxide reductase MsrB [Pasteurella multocida
subsp. gallicida X73]
Length = 130
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 23/31 (74%)
Query: 61 LDYWGIQRKRTKIKCNNCGALLGYIYDDGPP 91
LD + + R RT+I+C C A LG++++DGPP
Sbjct: 74 LDDYTLSRPRTEIRCGQCDAHLGHVFEDGPP 104
>gi|421263662|ref|ZP_15714690.1| methionine sulfoxide reductase B [Pasteurella multocida subsp.
multocida str. P52VAC]
gi|401689209|gb|EJS84684.1| methionine sulfoxide reductase B [Pasteurella multocida subsp.
multocida str. P52VAC]
Length = 130
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 23/31 (74%)
Query: 61 LDYWGIQRKRTKIKCNNCGALLGYIYDDGPP 91
LD + + R RT+I+C C A LG++++DGPP
Sbjct: 74 LDDYTLSRPRTEIRCGQCDAHLGHVFEDGPP 104
>gi|240949658|ref|ZP_04753993.1| methionine sulfoxide reductase B [Actinobacillus minor NM305]
gi|240295916|gb|EER46592.1| methionine sulfoxide reductase B [Actinobacillus minor NM305]
Length = 131
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 24/31 (77%)
Query: 61 LDYWGIQRKRTKIKCNNCGALLGYIYDDGPP 91
LD + + R RT+I+C NC + +G++++DGPP
Sbjct: 75 LDDYSLGRHRTEIRCGNCDSHMGHVFNDGPP 105
>gi|15602788|ref|NP_245860.1| methionine sulfoxide reductase B [Pasteurella multocida subsp.
multocida str. Pm70]
gi|383309928|ref|YP_005362738.1| methionine sulfoxide reductase B [Pasteurella multocida subsp.
multocida str. HN06]
gi|386833925|ref|YP_006239239.1| methionine-R-sulfoxide reductase [Pasteurella multocida subsp.
multocida str. 3480]
gi|417850880|ref|ZP_12496697.1| methionine sulfoxide reductase B [Pasteurella multocida subsp.
gallicida str. Anand1_poultry]
gi|417853588|ref|ZP_12498949.1| methionine sulfoxide reductase B [Pasteurella multocida subsp.
multocida str. Anand1_goat]
gi|425065786|ref|ZP_18468906.1| Peptide methionine sulfoxide reductase MsrB [Pasteurella multocida
subsp. gallicida P1059]
gi|20455143|sp|Q9CMB1.1|MSRB_PASMU RecName: Full=Peptide methionine sulfoxide reductase MsrB; AltName:
Full=Peptide-methionine (R)-S-oxide reductase
gi|12721242|gb|AAK03007.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
gi|338219277|gb|EGP04961.1| methionine sulfoxide reductase B [Pasteurella multocida subsp.
multocida str. Anand1_goat]
gi|338220256|gb|EGP05800.1| methionine sulfoxide reductase B [Pasteurella multocida subsp.
gallicida str. Anand1_poultry]
gi|380871200|gb|AFF23567.1| methionine sulfoxide reductase B [Pasteurella multocida subsp.
multocida str. HN06]
gi|385200625|gb|AFI45480.1| methionine-R-sulfoxide reductase [Pasteurella multocida subsp.
multocida str. 3480]
gi|404383281|gb|EJZ79735.1| Peptide methionine sulfoxide reductase MsrB [Pasteurella multocida
subsp. gallicida P1059]
Length = 130
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 23/31 (74%)
Query: 61 LDYWGIQRKRTKIKCNNCGALLGYIYDDGPP 91
LD + + R RT+I+C C A LG++++DGPP
Sbjct: 74 LDDYTLSRPRTEIRCGQCDAHLGHVFEDGPP 104
>gi|307245266|ref|ZP_07527357.1| Peptide-methionine-(S)-S-oxide reductase [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|307247438|ref|ZP_07529484.1| Peptide-methionine-(S)-S-oxide reductase [Actinobacillus
pleuropneumoniae serovar 2 str. S1536]
gi|307254213|ref|ZP_07536058.1| Peptide-methionine-(S)-S-oxide reductase [Actinobacillus
pleuropneumoniae serovar 9 str. CVJ13261]
gi|307258678|ref|ZP_07540413.1| Peptide-methionine-(S)-S-oxide reductase [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
gi|306853910|gb|EFM86124.1| Peptide-methionine-(S)-S-oxide reductase [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|306856054|gb|EFM88211.1| Peptide-methionine-(S)-S-oxide reductase [Actinobacillus
pleuropneumoniae serovar 2 str. S1536]
gi|306862913|gb|EFM94862.1| Peptide-methionine-(S)-S-oxide reductase [Actinobacillus
pleuropneumoniae serovar 9 str. CVJ13261]
gi|306867335|gb|EFM99188.1| Peptide-methionine-(S)-S-oxide reductase [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
Length = 133
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 24/31 (77%)
Query: 61 LDYWGIQRKRTKIKCNNCGALLGYIYDDGPP 91
LD + + R RT+I+C NC + +G++++DGPP
Sbjct: 77 LDDYSLGRHRTEIRCGNCDSHMGHVFNDGPP 107
>gi|303252677|ref|ZP_07338840.1| methionine sulfoxide reductase B [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|302648645|gb|EFL78838.1| methionine sulfoxide reductase B [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
Length = 131
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 24/31 (77%)
Query: 61 LDYWGIQRKRTKIKCNNCGALLGYIYDDGPP 91
LD + + R RT+I+C NC + +G++++DGPP
Sbjct: 75 LDDYSLGRHRTEIRCGNCDSHMGHVFNDGPP 105
>gi|378773923|ref|YP_005176166.1| peptide methionine sulfoxide reductase MsrB [Pasteurella multocida
36950]
gi|356596471|gb|AET15197.1| peptide methionine sulfoxide reductase MsrB [Pasteurella multocida
36950]
Length = 130
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 23/31 (74%)
Query: 61 LDYWGIQRKRTKIKCNNCGALLGYIYDDGPP 91
LD + + R RT+I+C C A LG++++DGPP
Sbjct: 74 LDDYTLSRPRTEIRCGQCDAHLGHVFEDGPP 104
>gi|307249657|ref|ZP_07531643.1| Peptide-methionine-(S)-S-oxide reductase [Actinobacillus
pleuropneumoniae serovar 4 str. M62]
gi|307251986|ref|ZP_07533887.1| Peptide-methionine-(S)-S-oxide reductase [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|307256484|ref|ZP_07538265.1| Peptide-methionine-(S)-S-oxide reductase [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
gi|307260909|ref|ZP_07542595.1| Peptide-methionine-(S)-S-oxide reductase [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
gi|307263094|ref|ZP_07544716.1| Peptide-methionine-(S)-S-oxide reductase [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
gi|306858355|gb|EFM90425.1| Peptide-methionine-(S)-S-oxide reductase [Actinobacillus
pleuropneumoniae serovar 4 str. M62]
gi|306860678|gb|EFM92690.1| Peptide-methionine-(S)-S-oxide reductase [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|306864894|gb|EFM96796.1| Peptide-methionine-(S)-S-oxide reductase [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
gi|306869476|gb|EFN01267.1| Peptide-methionine-(S)-S-oxide reductase [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
gi|306871720|gb|EFN03442.1| Peptide-methionine-(S)-S-oxide reductase [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
Length = 133
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 24/31 (77%)
Query: 61 LDYWGIQRKRTKIKCNNCGALLGYIYDDGPP 91
LD + + R RT+I+C NC + +G++++DGPP
Sbjct: 77 LDDYSLGRHRTEIRCGNCDSHMGHVFNDGPP 107
>gi|126207917|ref|YP_001053142.1| methionine sulfoxide reductase B [Actinobacillus pleuropneumoniae
serovar 5b str. L20]
gi|190149777|ref|YP_001968302.1| methionine sulfoxide reductase B [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|303249797|ref|ZP_07336001.1| methionine sulfoxide reductase B [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|126096709|gb|ABN73537.1| methionine sulfoxide reductase B [Actinobacillus pleuropneumoniae
serovar 5b str. L20]
gi|189914908|gb|ACE61160.1| methionine sulfoxide reductase B [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|302651364|gb|EFL81516.1| methionine sulfoxide reductase B [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
Length = 131
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 24/31 (77%)
Query: 61 LDYWGIQRKRTKIKCNNCGALLGYIYDDGPP 91
LD + + R RT+I+C NC + +G++++DGPP
Sbjct: 75 LDDYSLGRHRTEIRCGNCDSHMGHVFNDGPP 105
>gi|165975893|ref|YP_001651486.1| methionine sulfoxide reductase B [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|165875994|gb|ABY69042.1| peptide methionine sulfoxide reductase [Actinobacillus
pleuropneumoniae serovar 3 str. JL03]
Length = 131
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 24/31 (77%)
Query: 61 LDYWGIQRKRTKIKCNNCGALLGYIYDDGPP 91
LD + + R RT+I+C NC + +G++++DGPP
Sbjct: 75 LDDYSLGRHRTEIRCGNCDSHMGHVFNDGPP 105
>gi|443700798|gb|ELT99598.1| hypothetical protein CAPTEDRAFT_104871 [Capitella teleta]
Length = 129
Score = 40.8 bits (94), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 39/70 (55%), Gaps = 12/70 (17%)
Query: 21 LYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDYWGIQRKRTKIKCNNCGA 80
L+ ++V F AG + IDS L++++ + G++R T++ C+NCGA
Sbjct: 53 LFDSSVKFDAGCGWPSFYQAIDSDAITLQEDNSL----------GVER--TEVLCSNCGA 100
Query: 81 LLGYIYDDGP 90
LG+++ DGP
Sbjct: 101 HLGHVFPDGP 110
>gi|302806778|ref|XP_002985120.1| hypothetical protein SELMODRAFT_424211 [Selaginella moellendorffii]
gi|300146948|gb|EFJ13614.1| hypothetical protein SELMODRAFT_424211 [Selaginella moellendorffii]
Length = 151
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 19/90 (21%)
Query: 2 ASIYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETL 61
A IY C CGT L+ + F +G G S+ + + E + I PF
Sbjct: 62 AGIYECICCGT-------PLFNSITKFDSGT-GWPSYYEVIGNNVKSESDWSI-PFM--- 109
Query: 62 DYWGIQRKRTKIKCNNCGALLGYIYDDGPP 91
RT++KC+ C A LG+++DDGPP
Sbjct: 110 -------PRTEVKCSKCDAHLGHVFDDGPP 132
>gi|91774241|ref|YP_566933.1| methionine sulfoxide reductase B [Methanococcoides burtonii DSM
6242]
gi|91713256|gb|ABE53183.1| Peptide methionine-R-sulfoxide reductase [Methanococcoides burtonii
DSM 6242]
Length = 142
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 47/90 (52%), Gaps = 19/90 (21%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
+YSC CG + ++ + + ++ +P+ + +I + + L +D +F
Sbjct: 45 VYSCGACGQEI-FSSKNKFDSSSGWPS------FYEVISNDRVELVIDD---SYF----- 89
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGPPAV 93
KR +I+C+NCG+ LG+++DDGP +
Sbjct: 90 ----MKRIEIQCSNCGSHLGHVFDDGPQST 115
>gi|21227736|ref|NP_633658.1| methionine sulfoxide reductase B [Methanosarcina mazei Go1]
gi|452210220|ref|YP_007490334.1| Peptide methionine sulfoxide reductase MsrB [Methanosarcina mazei
Tuc01]
gi|74550397|sp|Q8PWF5.1|MSRB_METMA RecName: Full=Peptide methionine sulfoxide reductase MsrB; AltName:
Full=Peptide-methionine (R)-S-oxide reductase
gi|20906135|gb|AAM31330.1| transcriptional regulator [Methanosarcina mazei Go1]
gi|452100122|gb|AGF97062.1| Peptide methionine sulfoxide reductase MsrB [Methanosarcina mazei
Tuc01]
Length = 140
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 42/87 (48%), Gaps = 19/87 (21%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
IY+C CG L+ + F +G + +I S + RL +++ +F
Sbjct: 46 IYTCAACG-------QELFSSDTKFESGTGWPSFYDVISSDRVRLHEDN---SYF----- 90
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGP 90
KR ++ C+ CG+ LG++++DGP
Sbjct: 91 ----MKRIEVVCSRCGSHLGHVFEDGP 113
>gi|363582174|ref|ZP_09314984.1| SelR-like methionine sulfoxide reductase [Flavobacteriaceae
bacterium HQM9]
Length = 130
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 26/89 (29%)
Query: 5 YSCKECGTNLNLNTSHLYPATVYFP---AGNKGTLSFAMIDSTKFRLEKEDKIRPFFETL 61
Y+CK CGT L + H + + +P A +GT+ + S
Sbjct: 47 YTCKGCGTKL-FTSEHKFDSGCGWPSFDASEEGTVIYERDTS------------------ 87
Query: 62 DYWGIQRKRTKIKCNNCGALLGYIYDDGP 90
+ R RT+I C NCG LG++++DGP
Sbjct: 88 ----LGRIRTEILCANCGGHLGHVFNDGP 112
>gi|359300091|ref|ZP_09185930.1| methionine sulfoxide reductase B [Haemophilus [parainfluenzae] CCUG
13788]
gi|402305217|ref|ZP_10824276.1| methionine-R-sulfoxide reductase [Haemophilus sputorum HK 2154]
gi|400376330|gb|EJP29217.1| methionine-R-sulfoxide reductase [Haemophilus sputorum HK 2154]
Length = 131
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 23/31 (74%)
Query: 61 LDYWGIQRKRTKIKCNNCGALLGYIYDDGPP 91
LD + + R R +I+C+NC + LG+++ DGPP
Sbjct: 75 LDDYSLGRHRVEIRCSNCDSHLGHVFHDGPP 105
>gi|197285362|ref|YP_002151234.1| peptide methionine sulfoxide reductase [Proteus mirabilis HI4320]
gi|227355796|ref|ZP_03840189.1| peptide methionine sulfoxide reductase [Proteus mirabilis ATCC
29906]
gi|425068319|ref|ZP_18471435.1| peptide methionine sulfoxide reductase msrB [Proteus mirabilis
WGLW6]
gi|425072287|ref|ZP_18475393.1| peptide methionine sulfoxide reductase msrB [Proteus mirabilis
WGLW4]
gi|194682849|emb|CAR43158.1| peptide methionine sulfoxide reductase [Proteus mirabilis HI4320]
gi|227164115|gb|EEI49012.1| peptide methionine sulfoxide reductase [Proteus mirabilis ATCC
29906]
gi|404597502|gb|EKA97999.1| peptide methionine sulfoxide reductase msrB [Proteus mirabilis
WGLW4]
gi|404600301|gb|EKB00747.1| peptide methionine sulfoxide reductase msrB [Proteus mirabilis
WGLW6]
Length = 145
Score = 40.0 bits (92), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 23/30 (76%)
Query: 61 LDYWGIQRKRTKIKCNNCGALLGYIYDDGP 90
LD + KRT+I+C+ CGA LG++++DGP
Sbjct: 89 LDDFSHNMKRTEIRCHQCGAHLGHVFNDGP 118
>gi|359417891|ref|ZP_09209938.1| methionine-R-sulfoxide reductase [Candidatus Haloredivivus sp. G17]
gi|358031744|gb|EHK00601.1| methionine-R-sulfoxide reductase [Candidatus Haloredivivus sp. G17]
Length = 122
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 42/95 (44%), Gaps = 35/95 (36%)
Query: 5 YSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDYW 64
+ CK+CG L ++ H + + +P+ F+E LD
Sbjct: 34 FKCKKCGQAL-FSSDHKFESGSGWPS--------------------------FYEVLDAE 66
Query: 65 GIQRK--------RTKIKCNNCGALLGYIYDDGPP 91
I++K RT+I C+NC A LG++++DGP
Sbjct: 67 NIEKKEDNSHGMTRTEIVCSNCDAHLGHLFEDGPE 101
>gi|448317191|ref|ZP_21506749.1| Peptide methionine sulfoxide reductase msrB [Natronococcus jeotgali
DSM 18795]
gi|445604615|gb|ELY58562.1| Peptide methionine sulfoxide reductase msrB [Natronococcus jeotgali
DSM 18795]
Length = 132
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 41/88 (46%), Gaps = 24/88 (27%)
Query: 5 YSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKF--RLEKEDKIRPFFETLD 62
Y+C CGT L + + F +G G SF+ +D + RL+ +R
Sbjct: 48 YACVGCGTTL-------FDSETKFDSGC-GWPSFSDVDDDRVETRLDTSHGMR------- 92
Query: 63 YWGIQRKRTKIKCNNCGALLGYIYDDGP 90
RT++ C NCG LG+++DDGP
Sbjct: 93 -------RTEVLCANCGGHLGHVFDDGP 113
>gi|71065284|ref|YP_264011.1| hypothetical protein Psyc_0718 [Psychrobacter arcticus 273-4]
gi|71038269|gb|AAZ18577.1| conserved hypothetical protein [Psychrobacter arcticus 273-4]
Length = 141
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 19/87 (21%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
IY CK CG NL + + + A +P+ ++G ID++ +D +
Sbjct: 52 IYRCKGCGANL-FESDNKFDAGCGWPSFDQG------IDNSAIDEHVDDSL--------- 95
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGP 90
+RT++ C++C A LG+++ DGP
Sbjct: 96 ---GMRRTEVTCSHCSAHLGHVFPDGP 119
>gi|365825483|ref|ZP_09367439.1| methionine-R-sulfoxide reductase [Actinomyces graevenitzii C83]
gi|365258222|gb|EHM88236.1| methionine-R-sulfoxide reductase [Actinomyces graevenitzii C83]
Length = 139
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 52/122 (42%), Gaps = 34/122 (27%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
IYSC+ CG + L+ +T F +G + ++ L + K L Y
Sbjct: 48 IYSCRACG-------AQLFKSTTKFESGCGWPSFYDPKETDAVTLHSDYK-------LGY 93
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGPPAVDTPGQFHFGPSQVIPRYPRYRLKTKALRIS 123
+RT+++C NCG+ LG+++DD P P RY + + AL +
Sbjct: 94 -----ERTEVRCANCGSHLGHVFDDAP---------------ATPTGQRYCMNSVALSFA 133
Query: 124 TE 125
T+
Sbjct: 134 TD 135
>gi|113477493|ref|YP_723554.1| methionine-R-sulfoxide reductase [Trichodesmium erythraeum IMS101]
gi|110168541|gb|ABG53081.1| methionine-R-sulfoxide reductase [Trichodesmium erythraeum IMS101]
Length = 132
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 16/60 (26%)
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGPPAVDTPGQFHFGPSQVIPRYPRYRLKTKALRIS 123
W + +RT++ CNNC A LG+++ DGPP P RY L + AL+ S
Sbjct: 86 WSLFMRRTEVLCNNCDAHLGHVFPDGPP----------------PTGLRYCLNSAALKFS 129
>gi|424811609|ref|ZP_18236860.1| methionine-R-sulfoxide reductase [Candidatus Nanosalinarum sp.
J07AB56]
gi|339757335|gb|EGQ40916.1| methionine-R-sulfoxide reductase [Candidatus Nanosalinarum sp.
J07AB56]
Length = 122
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 20/86 (23%)
Query: 5 YSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDYW 64
+ CK+CGT L ++ Y + +P SF +S +K+ +
Sbjct: 37 FKCKKCGTEL-FDSDTKYDSGTGWP-------SFWDAESENVDKQKDHSM---------- 78
Query: 65 GIQRKRTKIKCNNCGALLGYIYDDGP 90
R RT++ C CGA LG+++DDGP
Sbjct: 79 --GRIRTEVVCTECGAHLGHVFDDGP 102
>gi|383766137|ref|YP_005445118.1| peptide methionine sulfoxide reductase MsrB [Phycisphaera
mikurensis NBRC 102666]
gi|381386405|dbj|BAM03221.1| peptide methionine sulfoxide reductase MsrB [Phycisphaera
mikurensis NBRC 102666]
Length = 149
Score = 39.7 bits (91), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 23/100 (23%)
Query: 2 ASIYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETL 61
A +Y C CG L YP++ F +G G SF ++IRP TL
Sbjct: 46 AGLYCCAACGNAL-------YPSSTKFHSGC-GWPSFF------------EEIRPDAITL 85
Query: 62 -DYWGIQRKRTKIKCNNCGALLGYIYDDGPPAVDTPGQFH 100
+ +RT+++C CG+ LG++++DGP D G+ H
Sbjct: 86 HEDLAFGMRRTEMRCAACGSHLGHVFNDGP--RDKTGKRH 123
>gi|448473863|ref|ZP_21601924.1| methionine-R-sulfoxide reductase [Halorubrum aidingense JCM 13560]
gi|445818442|gb|EMA68299.1| methionine-R-sulfoxide reductase [Halorubrum aidingense JCM 13560]
Length = 155
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 20/86 (23%)
Query: 5 YSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDYW 64
Y C+ CGT L + Y + +PA F +ED + +T
Sbjct: 71 YRCRACGTVL-FDAETKYESGCGWPA---------------FYAAEEDSVTTTVDT---- 110
Query: 65 GIQRKRTKIKCNNCGALLGYIYDDGP 90
+RT+++C NC + LG+++DDGP
Sbjct: 111 SHGMRRTEVRCANCDSHLGHVFDDGP 136
>gi|187923913|ref|YP_001895555.1| methionine sulfoxide reductase B [Burkholderia phytofirmans PsJN]
gi|187715107|gb|ACD16331.1| methionine-R-sulfoxide reductase [Burkholderia phytofirmans PsJN]
Length = 140
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 38/87 (43%), Gaps = 19/87 (21%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
IY C CGT L + + F AG F ID + EK D+
Sbjct: 54 IYDCVCCGTPL-------FESDTKFDAGCGWPSYFKPIDGEVIK-EKTDRSHGML----- 100
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGP 90
R +++C NCGA LG++++DGP
Sbjct: 101 ------RIEVECKNCGAHLGHVFEDGP 121
>gi|254360875|ref|ZP_04977022.1| peptide-methionine-(S)-S-oxide reductase [Mannheimia haemolytica
PHL213]
gi|452744518|ref|ZP_21944362.1| methionine sulfoxide reductase B [Mannheimia haemolytica serotype 6
str. H23]
gi|153092349|gb|EDN73418.1| peptide-methionine-(S)-S-oxide reductase [Mannheimia haemolytica
PHL213]
gi|452087471|gb|EME03850.1| methionine sulfoxide reductase B [Mannheimia haemolytica serotype 6
str. H23]
Length = 131
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 37/90 (41%), Gaps = 19/90 (21%)
Query: 2 ASIYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETL 61
IY C C +L + + F AG + I + R L
Sbjct: 35 VGIYRCARCHNDL-------FHSDTKFDAGCGWPSFYQTISESSLRY------------L 75
Query: 62 DYWGIQRKRTKIKCNNCGALLGYIYDDGPP 91
D + + R R +I+C NC + +G+++ DGPP
Sbjct: 76 DDYSLGRHRIEIRCGNCDSHMGHVFPDGPP 105
>gi|89067971|ref|ZP_01155415.1| hypothetical protein OG2516_05938 [Oceanicola granulosus HTCC2516]
gi|89046569|gb|EAR52625.1| hypothetical protein OG2516_05938 [Oceanicola granulosus HTCC2516]
Length = 158
Score = 39.3 bits (90), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 24/89 (26%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFA--MIDSTKFRLEKEDKIRPFFETL 61
IY C+ C LYP+ F +G G SF + D+ + + + R FF T
Sbjct: 73 IYHCRGC-------DQALYPSETKFDSGT-GWPSFTAPLDDAVETKPD-----RSFFIT- 118
Query: 62 DYWGIQRKRTKIKCNNCGALLGYIYDDGP 90
RT++ C+ CG+ LG+I+DDGP
Sbjct: 119 --------RTEVHCDRCGSHLGHIFDDGP 139
>gi|357418675|ref|YP_004931695.1| methionine sulfoxide reductase B [Pseudoxanthomonas spadix BD-a59]
gi|355336253|gb|AER57654.1| methionine sulfoxide reductase B [Pseudoxanthomonas spadix BD-a59]
Length = 157
Score = 39.3 bits (90), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 41/91 (45%), Gaps = 19/91 (20%)
Query: 1 MASIYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFET 60
+ +Y+C+ CG L + ++ F +G F ID R ++
Sbjct: 47 LEGVYTCRLCGLPL-------FASSAKFESGTGWPSFFKPIDPAHIRTVRDTS------- 92
Query: 61 LDYWGIQRKRTKIKCNNCGALLGYIYDDGPP 91
+G+ RT+I C CG+ LG+++ DGPP
Sbjct: 93 ---YGM--VRTEITCARCGSHLGHVFPDGPP 118
>gi|261492635|ref|ZP_05989188.1| methionine sulfoxide reductase B [Mannheimia haemolytica serotype
A2 str. BOVINE]
gi|261494616|ref|ZP_05991097.1| methionine sulfoxide reductase B [Mannheimia haemolytica serotype
A2 str. OVINE]
gi|261309728|gb|EEY10950.1| methionine sulfoxide reductase B [Mannheimia haemolytica serotype
A2 str. OVINE]
gi|261311794|gb|EEY12944.1| methionine sulfoxide reductase B [Mannheimia haemolytica serotype
A2 str. BOVINE]
Length = 158
Score = 39.3 bits (90), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 37/90 (41%), Gaps = 19/90 (21%)
Query: 2 ASIYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETL 61
IY C C +L + + F AG + I + R L
Sbjct: 62 VGIYRCARCHNDL-------FHSDTKFDAGCGWPSFYQTISESSLRY------------L 102
Query: 62 DYWGIQRKRTKIKCNNCGALLGYIYDDGPP 91
D + + R R +I+C NC + +G+++ DGPP
Sbjct: 103 DDYSLGRHRIEIRCGNCDSHMGHVFPDGPP 132
>gi|386876209|ref|ZP_10118338.1| methionine-R-sulfoxide reductase [Candidatus Nitrosopumilus salaria
BD31]
gi|386805990|gb|EIJ65480.1| methionine-R-sulfoxide reductase [Candidatus Nitrosopumilus salaria
BD31]
Length = 134
Score = 39.3 bits (90), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 19/90 (21%)
Query: 1 MASIYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFET 60
+ I+ C CG L+ + F +G+ + ID TK + +
Sbjct: 42 LEGIFKCVCCG-------QELFSSDTKFDSGSGWPSFWKPIDETKIE----------YVS 84
Query: 61 LDYWGIQRKRTKIKCNNCGALLGYIYDDGP 90
+G+ R T++ CN CGA LG+++DDGP
Sbjct: 85 DSAYGMVR--TEVNCNKCGAHLGHVFDDGP 112
>gi|225011933|ref|ZP_03702371.1| methionine-R-sulfoxide reductase [Flavobacteria bacterium MS024-2A]
gi|225004436|gb|EEG42408.1| methionine-R-sulfoxide reductase [Flavobacteria bacterium MS024-2A]
Length = 160
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%), Gaps = 5/49 (10%)
Query: 55 RPFFETLDY---WGIQRKRTKIKCNNCGALLGYIYDDGPPAVDTPGQFH 100
R F E L+Y + I R+++KCN CG LG++++DGP T GQ H
Sbjct: 100 RGFEENLEYDVDYKIGYPRSELKCNKCGGHLGHMFNDGP--RKTTGQRH 146
>gi|134277436|ref|ZP_01764151.1| methionine-R-sulfoxide reductase [Burkholderia pseudomallei 305]
gi|226197483|ref|ZP_03793060.1| methionine-R-sulfoxide reductase [Burkholderia pseudomallei
Pakistan 9]
gi|237812657|ref|YP_002897108.1| methionine-R-sulfoxide reductase [Burkholderia pseudomallei
MSHR346]
gi|134251086|gb|EBA51165.1| methionine-R-sulfoxide reductase [Burkholderia pseudomallei 305]
gi|225930862|gb|EEH26872.1| methionine-R-sulfoxide reductase [Burkholderia pseudomallei
Pakistan 9]
gi|237506037|gb|ACQ98355.1| methionine-R-sulfoxide reductase [Burkholderia pseudomallei
MSHR346]
Length = 161
Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 40/90 (44%), Gaps = 21/90 (23%)
Query: 2 ASIYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETL 61
A IY C CGT L + + F +G F ID E +
Sbjct: 68 AGIYHCVVCGTAL-------FESGAKFHSGCGWPSYFKPIDGEVID-----------EKM 109
Query: 62 DY-WGIQRKRTKIKCNNCGALLGYIYDDGP 90
DY G+ R +++CN CGA LG++++DGP
Sbjct: 110 DYTHGMTR--VEVRCNQCGAHLGHVFEDGP 137
>gi|83943898|ref|ZP_00956355.1| hypothetical protein EE36_09645 [Sulfitobacter sp. EE-36]
gi|83954470|ref|ZP_00963181.1| hypothetical protein NAS141_14653 [Sulfitobacter sp. NAS-14.1]
gi|83840754|gb|EAP79925.1| hypothetical protein NAS141_14653 [Sulfitobacter sp. NAS-14.1]
gi|83845145|gb|EAP83025.1| hypothetical protein EE36_09645 [Sulfitobacter sp. EE-36]
Length = 164
Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 36/88 (40%), Gaps = 20/88 (22%)
Query: 3 SIYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLD 62
++ CK C LY + F +G FA +D ET+
Sbjct: 76 GVFHCKGC-------DQALYSSETKFKSGTGWPSFFAPLDDA-------------VETMP 115
Query: 63 YWGIQRKRTKIKCNNCGALLGYIYDDGP 90
G RT++ C+ CG LG+++DDGP
Sbjct: 116 DKGFFTTRTEVHCDRCGGHLGHVFDDGP 143
>gi|53719057|ref|YP_108043.1| peptide methionine sulfoxide reductase [Burkholderia pseudomallei
K96243]
gi|53723648|ref|YP_103093.1| methionine-R-sulfoxide reductase [Burkholderia mallei ATCC 23344]
gi|121600241|ref|YP_993251.1| methionine-R-sulfoxide reductase [Burkholderia mallei SAVP1]
gi|124385040|ref|YP_001029305.1| methionine-R-sulfoxide reductase [Burkholderia mallei NCTC 10229]
gi|166998727|ref|ZP_02264581.1| methionine-R-sulfoxide reductase [Burkholderia mallei PRL-20]
gi|167719144|ref|ZP_02402380.1| methionine-R-sulfoxide reductase [Burkholderia pseudomallei DM98]
gi|167738146|ref|ZP_02410920.1| methionine-R-sulfoxide reductase [Burkholderia pseudomallei 14]
gi|167823740|ref|ZP_02455211.1| methionine-R-sulfoxide reductase [Burkholderia pseudomallei 9]
gi|167893831|ref|ZP_02481233.1| methionine-R-sulfoxide reductase [Burkholderia pseudomallei 7894]
gi|167902282|ref|ZP_02489487.1| methionine-R-sulfoxide reductase [Burkholderia pseudomallei NCTC
13177]
gi|167918551|ref|ZP_02505642.1| methionine-R-sulfoxide reductase [Burkholderia pseudomallei BCC215]
gi|254178687|ref|ZP_04885342.1| methionine-R-sulfoxide reductase [Burkholderia mallei ATCC 10399]
gi|254200040|ref|ZP_04906406.1| methionine-R-sulfoxide reductase [Burkholderia mallei FMH]
gi|254206375|ref|ZP_04912727.1| methionine-R-sulfoxide reductase [Burkholderia mallei JHU]
gi|254358211|ref|ZP_04974484.1| methionine-R-sulfoxide reductase [Burkholderia mallei 2002721280]
gi|418382842|ref|ZP_12966767.1| methionine-R-sulfoxide reductase [Burkholderia pseudomallei 354a]
gi|418540585|ref|ZP_13106113.1| methionine-R-sulfoxide reductase [Burkholderia pseudomallei 1258a]
gi|418546829|ref|ZP_13112018.1| methionine-R-sulfoxide reductase [Burkholderia pseudomallei 1258b]
gi|418553048|ref|ZP_13117889.1| methionine-R-sulfoxide reductase [Burkholderia pseudomallei 354e]
gi|81604894|sp|Q62JM6.1|MSRB_BURMA RecName: Full=Peptide methionine sulfoxide reductase MsrB; AltName:
Full=Peptide-methionine (R)-S-oxide reductase
gi|81607966|sp|Q63V23.1|MSRB_BURPS RecName: Full=Peptide methionine sulfoxide reductase MsrB; AltName:
Full=Peptide-methionine (R)-S-oxide reductase
gi|226711719|sp|A2SBI6.1|MSRB_BURM9 RecName: Full=Peptide methionine sulfoxide reductase MsrB; AltName:
Full=Peptide-methionine (R)-S-oxide reductase
gi|226711720|sp|A1V4U8.1|MSRB_BURMS RecName: Full=Peptide methionine sulfoxide reductase MsrB; AltName:
Full=Peptide-methionine (R)-S-oxide reductase
gi|52209471|emb|CAH35423.1| peptide methionine sulfoxide reductase [Burkholderia pseudomallei
K96243]
gi|52427071|gb|AAU47664.1| methionine-R-sulfoxide reductase [Burkholderia mallei ATCC 23344]
gi|121229051|gb|ABM51569.1| methionine-R-sulfoxide reductase [Burkholderia mallei SAVP1]
gi|124293060|gb|ABN02329.1| methionine-R-sulfoxide reductase [Burkholderia mallei NCTC 10229]
gi|147749636|gb|EDK56710.1| methionine-R-sulfoxide reductase [Burkholderia mallei FMH]
gi|147753818|gb|EDK60883.1| methionine-R-sulfoxide reductase [Burkholderia mallei JHU]
gi|148027338|gb|EDK85359.1| methionine-R-sulfoxide reductase [Burkholderia mallei 2002721280]
gi|160699726|gb|EDP89696.1| methionine-R-sulfoxide reductase [Burkholderia mallei ATCC 10399]
gi|243065081|gb|EES47267.1| methionine-R-sulfoxide reductase [Burkholderia mallei PRL-20]
gi|385361075|gb|EIF66973.1| methionine-R-sulfoxide reductase [Burkholderia pseudomallei 1258a]
gi|385362858|gb|EIF68652.1| methionine-R-sulfoxide reductase [Burkholderia pseudomallei 1258b]
gi|385372164|gb|EIF77289.1| methionine-R-sulfoxide reductase [Burkholderia pseudomallei 354e]
gi|385376961|gb|EIF81590.1| methionine-R-sulfoxide reductase [Burkholderia pseudomallei 354a]
Length = 143
Score = 39.3 bits (90), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 40/90 (44%), Gaps = 21/90 (23%)
Query: 2 ASIYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETL 61
A IY C CGT L + + F +G F ID E +
Sbjct: 50 AGIYHCVVCGTAL-------FESGAKFHSGCGWPSYFKPIDGEVID-----------EKM 91
Query: 62 DY-WGIQRKRTKIKCNNCGALLGYIYDDGP 90
DY G+ R +++CN CGA LG++++DGP
Sbjct: 92 DYTHGMTR--VEVRCNQCGAHLGHVFEDGP 119
>gi|126178977|ref|YP_001046942.1| methionine sulfoxide reductase B [Methanoculleus marisnigri JR1]
gi|125861771|gb|ABN56960.1| methionine-R-sulfoxide reductase [Methanoculleus marisnigri JR1]
Length = 161
Score = 38.9 bits (89), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 51/123 (41%), Gaps = 37/123 (30%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAM-IDSTKFRLEKEDKIRPFFETLD 62
+Y C CG +HL+ + F +G G SF+ + R E + + FF
Sbjct: 68 LYVCVCCG-------NHLFSSKTKFESGT-GWPSFSKPVSDLNVRAEPDTR---FF---- 112
Query: 63 YWGIQRKRTKIKCNNCGALLGYIYDDGPPAVDTPGQFHFGPSQVIPRYPRYRLKTKALRI 122
RT++ C C A LG+++DDGPP P + RY + + +LR
Sbjct: 113 -----MNRTEVLCRRCDAHLGHVFDDGPP----------------PTHQRYCMNSASLRF 151
Query: 123 STE 125
E
Sbjct: 152 VRE 154
>gi|126449012|ref|YP_001080759.1| methionine-R-sulfoxide reductase [Burkholderia mallei NCTC 10247]
gi|238562189|ref|ZP_00440764.2| methionine-R-sulfoxide reductase [Burkholderia mallei GB8 horse 4]
gi|126241882|gb|ABO04975.1| methionine-R-sulfoxide reductase [Burkholderia mallei NCTC 10247]
gi|238523042|gb|EEP86483.1| methionine-R-sulfoxide reductase [Burkholderia mallei GB8 horse 4]
Length = 151
Score = 38.9 bits (89), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 40/90 (44%), Gaps = 21/90 (23%)
Query: 2 ASIYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETL 61
A IY C CGT L + + F +G F ID E +
Sbjct: 58 AGIYHCVVCGTAL-------FESGAKFHSGCGWPSYFKPIDGEVID-----------EKM 99
Query: 62 DY-WGIQRKRTKIKCNNCGALLGYIYDDGP 90
DY G+ R +++CN CGA LG++++DGP
Sbjct: 100 DYTHGMTR--VEVRCNQCGAHLGHVFEDGP 127
>gi|336476106|ref|YP_004615247.1| hypothetical protein [Methanosalsum zhilinae DSM 4017]
gi|335929487|gb|AEH60028.1| hypothetical protein Mzhil_0148 [Methanosalsum zhilinae DSM 4017]
Length = 128
Score = 38.9 bits (89), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 41/88 (46%), Gaps = 19/88 (21%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
IY+C CG L ++ + + +P+ N A + K LE++
Sbjct: 42 IYTCSACGQEL-FDSESKFDSGTGWPSFN------APLSEKKVSLEEDT----------- 83
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGPP 91
+RT++ C+ C + LG+++DDGPP
Sbjct: 84 -SYMMRRTEVVCSRCKSHLGHVFDDGPP 110
>gi|221378662|ref|NP_001138036.1| SelR, isoform G [Drosophila melanogaster]
gi|25013054|gb|AAN71615.1| RH61230p [Drosophila melanogaster]
gi|220903047|gb|ACL83495.1| SelR, isoform G [Drosophila melanogaster]
Length = 157
Score = 38.9 bits (89), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 42/88 (47%), Gaps = 11/88 (12%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
+Y C C +L ++ Y + +PA N ++D K L ++ I
Sbjct: 48 VYQCIVCHQDL-FSSETKYDSGCGWPAFND------VLDKGKVTLHRDASIPVVISKT-- 98
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGPP 91
+ RT+++C+ C A +G+++DDGPP
Sbjct: 99 --LGMVRTEVRCSRCSAHMGHVFDDGPP 124
>gi|167815333|ref|ZP_02447013.1| methionine-R-sulfoxide reductase [Burkholderia pseudomallei 91]
Length = 118
Score = 38.9 bits (89), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 40/90 (44%), Gaps = 21/90 (23%)
Query: 2 ASIYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETL 61
A IY C CGT L + + F +G F ID E +
Sbjct: 25 AGIYHCVVCGTAL-------FESGAKFHSGCGWPSYFKPIDGEVID-----------EKM 66
Query: 62 DY-WGIQRKRTKIKCNNCGALLGYIYDDGP 90
DY G+ R +++CN CGA LG++++DGP
Sbjct: 67 DYTHGM--TRVEVRCNQCGAHLGHVFEDGP 94
>gi|320103665|ref|YP_004179256.1| methionine-R-sulfoxide reductase [Isosphaera pallida ATCC 43644]
gi|319750947|gb|ADV62707.1| methionine-R-sulfoxide reductase [Isosphaera pallida ATCC 43644]
Length = 139
Score = 38.9 bits (89), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 19/87 (21%)
Query: 5 YSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDYW 64
Y C CG L ++ H + + +P+ F ID E++ R +F
Sbjct: 54 YLCVCCGQPL-FSSDHKFDSGTGWPS------FFQAIDPAAVVTEED---RSYFMV---- 99
Query: 65 GIQRKRTKIKCNNCGALLGYIYDDGPP 91
RT+I C+NCG+ LG++++DGPP
Sbjct: 100 -----RTEILCSNCGSHLGHVFEDGPP 121
>gi|302772741|ref|XP_002969788.1| hypothetical protein SELMODRAFT_92187 [Selaginella moellendorffii]
gi|300162299|gb|EFJ28912.1| hypothetical protein SELMODRAFT_92187 [Selaginella moellendorffii]
Length = 121
Score = 38.9 bits (89), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 41/90 (45%), Gaps = 19/90 (21%)
Query: 2 ASIYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETL 61
A IY C CGT L+ + F +G G S+ + E + I PF
Sbjct: 41 AGIYECICCGT-------PLFNSITKFDSGT-GWPSYYEAIGNNVKSESDWSI-PFM--- 88
Query: 62 DYWGIQRKRTKIKCNNCGALLGYIYDDGPP 91
RT++KC+ C A LG+++DDGPP
Sbjct: 89 -------PRTEVKCSKCDAHLGHVFDDGPP 111
>gi|195157666|ref|XP_002019717.1| GL12062 [Drosophila persimilis]
gi|194116308|gb|EDW38351.1| GL12062 [Drosophila persimilis]
Length = 205
Score = 38.9 bits (89), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 54/116 (46%), Gaps = 15/116 (12%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
+Y C C +L ++ Y + +PA N ++D K L ++ I P +
Sbjct: 48 VYQCIVCHQDL-FSSDTKYDSGCGWPAFND------VLDKGKVTLHRDASI-PVVISKTL 99
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGPPAVDTPGQFHFGPSQVIPRYPRYRLKTKA 119
+ RT+++C+ C A +G+++DDGPP P F + + + R++T+
Sbjct: 100 GMV---RTEVRCSKCSAHMGHVFDDGPP----PKHHRFCINSASIDFVKKRIRTEV 148
>gi|373457516|ref|ZP_09549283.1| Peptide methionine sulfoxide reductase msrB [Caldithrix abyssi DSM
13497]
gi|371719180|gb|EHO40951.1| Peptide methionine sulfoxide reductase msrB [Caldithrix abyssi DSM
13497]
Length = 168
Score = 38.9 bits (89), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 14/22 (63%), Positives = 19/22 (86%)
Query: 70 RTKIKCNNCGALLGYIYDDGPP 91
RT+I C +CGA LG+++DDGPP
Sbjct: 125 RTEILCASCGAHLGHVFDDGPP 146
>gi|386765531|ref|NP_001247036.1| SelR, isoform J [Drosophila melanogaster]
gi|284515894|gb|ADB91454.1| RE60235p [Drosophila melanogaster]
gi|383292628|gb|AFH06354.1| SelR, isoform J [Drosophila melanogaster]
Length = 192
Score = 38.9 bits (89), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 41/88 (46%), Gaps = 18/88 (20%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
+Y C C +L ++ Y + +PA N ++D K L ++ I
Sbjct: 90 VYQCIVCHQDL-FSSETKYDSGCGWPAFND------VLDKGKVTLHRDASIPGMV----- 137
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGPP 91
RT+++C+ C A +G+++DDGPP
Sbjct: 138 ------RTEVRCSRCSAHMGHVFDDGPP 159
>gi|410918440|ref|XP_003972693.1| PREDICTED: methionine-R-sulfoxide reductase B3, mitochondrial-like
[Takifugu rubripes]
Length = 187
Score = 38.9 bits (89), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 19/86 (22%)
Query: 5 YSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDYW 64
Y+C CG L + + F +G+ G SF F L KED I D +
Sbjct: 77 YTCVVCGDPL-------FSSNAKFDSGS-GWPSF-------FDLMKEDSIT----ESDDF 117
Query: 65 GIQRKRTKIKCNNCGALLGYIYDDGP 90
R ++ C+ CGA LG+++DDGP
Sbjct: 118 SAGMHRLEVACSRCGAHLGHLFDDGP 143
>gi|85817720|gb|EAQ38894.1| peptide-methionine (R)-S-oxide reductase [Dokdonia donghaensis
MED134]
Length = 129
Score = 38.9 bits (89), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 14/23 (60%), Positives = 20/23 (86%)
Query: 70 RTKIKCNNCGALLGYIYDDGPPA 92
RT+I C+NCG+ LG+++DDGP A
Sbjct: 91 RTEILCSNCGSHLGHVFDDGPTA 113
>gi|195571887|ref|XP_002103932.1| GD20695 [Drosophila simulans]
gi|194199859|gb|EDX13435.1| GD20695 [Drosophila simulans]
Length = 251
Score = 38.9 bits (89), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 41/88 (46%), Gaps = 18/88 (20%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
+Y C C +L ++ Y + +PA N ++D K L ++ I
Sbjct: 91 VYQCIVCHQDL-FSSDTKYDSGCGWPAFND------VLDKGKVTLHRDASIPGMV----- 138
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGPP 91
RT+++C+ C A +G+++DDGPP
Sbjct: 139 ------RTEVRCSRCSAHMGHVFDDGPP 160
>gi|86605723|ref|YP_474486.1| methionine-R-sulfoxide reductase [Synechococcus sp. JA-3-3Ab]
gi|86554265|gb|ABC99223.1| methionine-R-sulfoxide reductase [Synechococcus sp. JA-3-3Ab]
Length = 136
Score = 38.5 bits (88), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 20/28 (71%)
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGPP 91
W + RT++ C+NCG LG+++ DGPP
Sbjct: 89 WKLLVPRTEVHCSNCGGHLGHVFRDGPP 116
>gi|209544868|ref|YP_002277097.1| methionine-R-sulfoxide reductase [Gluconacetobacter diazotrophicus
PAl 5]
gi|209532545|gb|ACI52482.1| methionine-R-sulfoxide reductase [Gluconacetobacter diazotrophicus
PAl 5]
Length = 154
Score = 38.5 bits (88), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 19/26 (73%)
Query: 66 IQRKRTKIKCNNCGALLGYIYDDGPP 91
+ R RT++ C CG LG+++DDGPP
Sbjct: 111 LGRDRTEVLCATCGGHLGHVFDDGPP 136
>gi|88604193|ref|YP_504371.1| methionine sulfoxide reductase B [Methanospirillum hungatei JF-1]
gi|88189655|gb|ABD42652.1| Protein-methionine-S-oxide reductase [Methanospirillum hungatei
JF-1]
Length = 156
Score = 38.5 bits (88), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 43/92 (46%), Gaps = 21/92 (22%)
Query: 1 MASIYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAM-IDSTKFRLEKEDKIRPFFE 59
+A +Y C CGT+L + + F +G G SF+ + + R K+
Sbjct: 60 IAGLYRCACCGTDL-------FSSVDKFDSGT-GWPSFSGPVSAMNIRTRKDS------- 104
Query: 60 TLDYWGIQRKRTKIKCNNCGALLGYIYDDGPP 91
G +RT++ C C A LG+++DDGPP
Sbjct: 105 -----GYGMERTEVLCGLCDAHLGHVFDDGPP 131
>gi|195499897|ref|XP_002097143.1| GE24659 [Drosophila yakuba]
gi|194183244|gb|EDW96855.1| GE24659 [Drosophila yakuba]
Length = 252
Score = 38.5 bits (88), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 41/88 (46%), Gaps = 18/88 (20%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
+Y C C +L ++ Y + +PA N ++D K L ++ I
Sbjct: 92 VYQCIVCHQDL-FSSDTKYDSGCGWPAFND------VLDKGKVTLHRDASIPGMV----- 139
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGPP 91
RT+++C+ C A +G+++DDGPP
Sbjct: 140 ------RTEVRCSRCSAHMGHVFDDGPP 161
>gi|194902180|ref|XP_001980627.1| GG17257 [Drosophila erecta]
gi|190652330|gb|EDV49585.1| GG17257 [Drosophila erecta]
Length = 238
Score = 38.5 bits (88), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 41/88 (46%), Gaps = 18/88 (20%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
+Y C C +L ++ Y + +PA N ++D K L ++ I
Sbjct: 89 VYQCIVCHQDL-FSSDTKYDSGCGWPAFND------VLDKGKVTLHRDASIPGMV----- 136
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGPP 91
RT+++C+ C A +G+++DDGPP
Sbjct: 137 ------RTEVRCSRCSAHMGHVFDDGPP 158
>gi|170043306|ref|XP_001849334.1| methionine-R-sulfoxide reductase [Culex quinquefasciatus]
gi|167866690|gb|EDS30073.1| methionine-R-sulfoxide reductase [Culex quinquefasciatus]
Length = 163
Score = 38.5 bits (88), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 21/24 (87%)
Query: 68 RKRTKIKCNNCGALLGYIYDDGPP 91
R RT+++C+ CGA +G++++DGPP
Sbjct: 112 RVRTEVRCSKCGAHMGHVFEDGPP 135
>gi|390179495|ref|XP_003736912.1| GA19702, isoform F [Drosophila pseudoobscura pseudoobscura]
gi|388859876|gb|EIM52985.1| GA19702, isoform F [Drosophila pseudoobscura pseudoobscura]
Length = 148
Score = 38.5 bits (88), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 41/88 (46%), Gaps = 18/88 (20%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
+Y C C +L ++ Y + +PA N ++D K L ++ I
Sbjct: 48 VYQCIVCHQDL-FSSDTKYDSGCGWPAFND------VLDKGKVTLHRDASIPGMV----- 95
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGPP 91
RT+++C+ C A +G+++DDGPP
Sbjct: 96 ------RTEVRCSKCSAHMGHVFDDGPP 117
>gi|195329997|ref|XP_002031695.1| GM26142 [Drosophila sechellia]
gi|194120638|gb|EDW42681.1| GM26142 [Drosophila sechellia]
Length = 250
Score = 38.5 bits (88), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 41/88 (46%), Gaps = 18/88 (20%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
+Y C C +L ++ Y + +PA N ++D K L ++ I
Sbjct: 90 VYQCIVCHQDL-FSSDTKYDSGCGWPAFND------VLDKGKVTLHRDASIPGMV----- 137
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGPP 91
RT+++C+ C A +G+++DDGPP
Sbjct: 138 ------RTEVRCSRCSAHMGHVFDDGPP 159
>gi|107028912|ref|YP_626007.1| protein-methionine-S-oxide reductase [Burkholderia cenocepacia AU
1054]
gi|116689930|ref|YP_835553.1| methionine-R-sulfoxide reductase [Burkholderia cenocepacia HI2424]
gi|123179958|sp|Q1BH71.1|MSRB_BURCA RecName: Full=Peptide methionine sulfoxide reductase MsrB; AltName:
Full=Peptide-methionine (R)-S-oxide reductase
gi|226710049|sp|A0K833.1|MSRB_BURCH RecName: Full=Peptide methionine sulfoxide reductase MsrB; AltName:
Full=Peptide-methionine (R)-S-oxide reductase
gi|105898076|gb|ABF81034.1| Protein-methionine-S-oxide reductase [Burkholderia cenocepacia AU
1054]
gi|116648019|gb|ABK08660.1| methionine-R-sulfoxide reductase [Burkholderia cenocepacia HI2424]
Length = 143
Score = 38.5 bits (88), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 12/21 (57%), Positives = 19/21 (90%)
Query: 70 RTKIKCNNCGALLGYIYDDGP 90
R +++CNNCGA LG++++DGP
Sbjct: 99 RVEVRCNNCGAHLGHVFEDGP 119
>gi|407464588|ref|YP_006775470.1| methionine-R-sulfoxide reductase [Candidatus Nitrosopumilus sp.
AR2]
gi|407047776|gb|AFS82528.1| methionine-R-sulfoxide reductase [Candidatus Nitrosopumilus sp.
AR2]
Length = 135
Score = 38.5 bits (88), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 13/21 (61%), Positives = 18/21 (85%)
Query: 70 RTKIKCNNCGALLGYIYDDGP 90
RT++ CN CGA LG+++DDGP
Sbjct: 92 RTEVNCNKCGAHLGHVFDDGP 112
>gi|352081800|ref|ZP_08952642.1| methionine-R-sulfoxide reductase [Rhodanobacter sp. 2APBS1]
gi|351682706|gb|EHA65802.1| methionine-R-sulfoxide reductase [Rhodanobacter sp. 2APBS1]
Length = 200
Score = 38.5 bits (88), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 19/87 (21%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
++ C C T L Y A F +G G SF + + +E+ D +
Sbjct: 111 LFRCVACATAL-------YDAATEFDSGT-GWPSFWQPIAARNVIERSDHL--------- 153
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGP 90
+G+QR T I C C + LG+++DDGP
Sbjct: 154 FGMQR--TAISCAGCDSHLGHVFDDGP 178
>gi|86610059|ref|YP_478821.1| methionine-R-sulfoxide reductase [Synechococcus sp.
JA-2-3B'a(2-13)]
gi|86558601|gb|ABD03558.1| methionine-R-sulfoxide reductase [Synechococcus sp.
JA-2-3B'a(2-13)]
Length = 167
Score = 38.5 bits (88), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 20/28 (71%)
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGPP 91
W + RT++ C+NCG LG+++ DGPP
Sbjct: 120 WKLFVPRTEVHCSNCGGHLGHVFRDGPP 147
>gi|221378664|ref|NP_731525.2| SelR, isoform H [Drosophila melanogaster]
gi|25012549|gb|AAN71376.1| RE36040p [Drosophila melanogaster]
gi|220903048|gb|AAN13493.2| SelR, isoform H [Drosophila melanogaster]
Length = 150
Score = 38.5 bits (88), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 41/88 (46%), Gaps = 18/88 (20%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
+Y C C +L ++ Y + +PA N ++D K L ++ I
Sbjct: 48 VYQCIVCHQDL-FSSETKYDSGCGWPAFND------VLDKGKVTLHRDASIPGMV----- 95
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGPP 91
RT+++C+ C A +G+++DDGPP
Sbjct: 96 ------RTEVRCSRCSAHMGHVFDDGPP 117
>gi|161528205|ref|YP_001582031.1| methionine-R-sulfoxide reductase [Nitrosopumilus maritimus SCM1]
gi|160339506|gb|ABX12593.1| methionine-R-sulfoxide reductase [Nitrosopumilus maritimus SCM1]
Length = 135
Score = 38.5 bits (88), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 13/21 (61%), Positives = 18/21 (85%)
Query: 70 RTKIKCNNCGALLGYIYDDGP 90
RT++ CN CGA LG+++DDGP
Sbjct: 92 RTEVNCNKCGAHLGHVFDDGP 112
>gi|195390055|ref|XP_002053684.1| GJ24030 [Drosophila virilis]
gi|194151770|gb|EDW67204.1| GJ24030 [Drosophila virilis]
Length = 200
Score = 38.5 bits (88), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 41/88 (46%), Gaps = 18/88 (20%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
+Y C C +L ++ Y + +PA N ++D K L ++ I
Sbjct: 48 VYQCIVCHQDL-FSSDTKYDSGCGWPAFND------VLDKGKVTLHRDASIPGMV----- 95
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGPP 91
RT+++C+ C A +G+++DDGPP
Sbjct: 96 ------RTEVRCSKCSAHMGHVFDDGPP 117
>gi|195036180|ref|XP_001989549.1| GH18739 [Drosophila grimshawi]
gi|193893745|gb|EDV92611.1| GH18739 [Drosophila grimshawi]
Length = 200
Score = 38.5 bits (88), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 41/88 (46%), Gaps = 18/88 (20%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
+Y C C +L ++ Y + +PA N ++D K L ++ I
Sbjct: 48 VYQCIVCHQDL-FSSDTKYDSGCGWPAFND------VLDKGKVTLHRDASIPGMV----- 95
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGPP 91
RT+++C+ C A +G+++DDGPP
Sbjct: 96 ------RTEVRCSKCSAHMGHVFDDGPP 117
>gi|393758452|ref|ZP_10347273.1| methionine sulfoxide reductase B [Alcaligenes faecalis subsp.
faecalis NCIB 8687]
gi|393164871|gb|EJC64923.1| methionine sulfoxide reductase B [Alcaligenes faecalis subsp.
faecalis NCIB 8687]
Length = 131
Score = 38.5 bits (88), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 40/90 (44%), Gaps = 19/90 (21%)
Query: 2 ASIYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETL 61
A IY C CGT L + + F AG F ++ D +R +T
Sbjct: 42 AGIYRCVGCGTPL-------FASDTKFDAGCGWPSYFTPLNP--------DNVREELDT- 85
Query: 62 DYWGIQRKRTKIKCNNCGALLGYIYDDGPP 91
+RT++ CN C A LG++++DGPP
Sbjct: 86 ---SHGMRRTEVLCNVCDAHLGHVFEDGPP 112
>gi|345303343|ref|YP_004825245.1| peptide methionine sulfoxide reductase msrB [Rhodothermus marinus
SG0.5JP17-172]
gi|345112576|gb|AEN73408.1| Peptide methionine sulfoxide reductase msrB [Rhodothermus marinus
SG0.5JP17-172]
Length = 136
Score = 38.5 bits (88), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 36/88 (40%), Gaps = 19/88 (21%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
IY C CG L + + + +G +A IDS ET D
Sbjct: 46 IYRCAGCGLPL-------FSSEAKYDSGTGWPSFYAPIDSAHV------------ETSDD 86
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGPP 91
+ + R ++ C CG LG+++ DGPP
Sbjct: 87 YSLGMHRIEVHCAACGGHLGHVFPDGPP 114
>gi|407462237|ref|YP_006773554.1| methionine-R-sulfoxide reductase [Candidatus Nitrosopumilus
koreensis AR1]
gi|407045859|gb|AFS80612.1| methionine-R-sulfoxide reductase [Candidatus Nitrosopumilus
koreensis AR1]
Length = 136
Score = 38.5 bits (88), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 13/21 (61%), Positives = 18/21 (85%)
Query: 70 RTKIKCNNCGALLGYIYDDGP 90
RT++ CN CGA LG+++DDGP
Sbjct: 92 RTEVNCNKCGAHLGHVFDDGP 112
>gi|194746221|ref|XP_001955579.1| GF16176 [Drosophila ananassae]
gi|190628616|gb|EDV44140.1| GF16176 [Drosophila ananassae]
Length = 251
Score = 38.5 bits (88), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 41/88 (46%), Gaps = 18/88 (20%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
+Y C C +L ++ Y + +PA N ++D K L ++ I
Sbjct: 89 VYQCIVCHQDL-FSSDTKYDSGCGWPAFND------VLDKGKVTLHRDASIPGMV----- 136
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGPP 91
RT+++C+ C A +G+++DDGPP
Sbjct: 137 ------RTEVRCSRCSAHMGHVFDDGPP 158
>gi|389796481|ref|ZP_10199533.1| methionine-R-sulfoxide reductase [Rhodanobacter sp. 116-2]
gi|388448405|gb|EIM04389.1| methionine-R-sulfoxide reductase [Rhodanobacter sp. 116-2]
Length = 190
Score = 38.5 bits (88), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 19/87 (21%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
++ C C T L Y A F +G G SF + + +E+ D +
Sbjct: 102 LFRCVACATAL-------YDAATEFDSGT-GWPSFWQPIAARNVIERSDHL--------- 144
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGP 90
+G+QR T I C C + LG+++DDGP
Sbjct: 145 FGMQR--TAISCAGCDSHLGHVFDDGP 169
>gi|332290931|ref|YP_004429540.1| methionine-R-sulfoxide reductase [Krokinobacter sp. 4H-3-7-5]
gi|332169017|gb|AEE18272.1| methionine-R-sulfoxide reductase [Krokinobacter sp. 4H-3-7-5]
Length = 129
Score = 38.5 bits (88), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 14/23 (60%), Positives = 20/23 (86%)
Query: 70 RTKIKCNNCGALLGYIYDDGPPA 92
RT+I C+NCG+ LG+++DDGP A
Sbjct: 91 RTEILCSNCGSHLGHVFDDGPTA 113
>gi|330817254|ref|YP_004360959.1| Methionine-R-sulfoxide reductase [Burkholderia gladioli BSR3]
gi|327369647|gb|AEA61003.1| Methionine-R-sulfoxide reductase [Burkholderia gladioli BSR3]
Length = 142
Score = 38.5 bits (88), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 12/21 (57%), Positives = 19/21 (90%)
Query: 70 RTKIKCNNCGALLGYIYDDGP 90
R +++CNNCGA LG++++DGP
Sbjct: 99 RVEVRCNNCGAHLGHVFEDGP 119
>gi|223995161|ref|XP_002287264.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220976380|gb|EED94707.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 109
Score = 38.5 bits (88), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 47/124 (37%), Gaps = 38/124 (30%)
Query: 2 ASIYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETL 61
+ IYSC C S L+ + + +G+ + +DS + L+KE
Sbjct: 21 SGIYSCANC-------RSPLFSSAAKYDSGSGWPSFWRTVDSERVSLKKE---------- 63
Query: 62 DYWGIQRKRTKIKCNNCGALLGYIYDDGPPAVDTPGQFHFGPSQVIPRYPRYRLKTKALR 121
R + C NCG LG+++ DGP + R PRY + ALR
Sbjct: 64 -----WDGRIECLCANCGGHLGHVFPDGPQS----------------RMPRYCVNGAALR 102
Query: 122 ISTE 125
+
Sbjct: 103 FDED 106
>gi|326531716|dbj|BAJ97862.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 165
Score = 38.5 bits (88), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 13/91 (14%)
Query: 5 YSCKECGTNLNLNTSHLYPATVYFPAGN----KGTLSFAMIDSTKFRLEKE----DKIRP 56
YSC CG LNL+++ A + G KG ++F +D T+F E ++RP
Sbjct: 19 YSCGYCGYALNLSSAARNTAGIGSKYGKQIRKKGVVAFVAVDETRFTQADEVTCAPRLRP 78
Query: 57 FFETLDYWGIQRKRTKIKCNNCGALLGYIYD 87
+ W + R+R+++ C CG +G Y+
Sbjct: 79 WT-----WRLFRRRSRLLCGKCGGRIGAAYE 104
>gi|20089340|ref|NP_615415.1| methionine sulfoxide reductase B [Methanosarcina acetivorans C2A]
gi|19914231|gb|AAM03895.1| pilin-like transcription factor [Methanosarcina acetivorans C2A]
Length = 147
Score = 38.5 bits (88), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 40/87 (45%), Gaps = 19/87 (21%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
+Y+C CG L + + F +G + I S K RL KED +F
Sbjct: 53 VYTCAACGQEL-------FSSDTKFESGTGWPSFYDAISSDKVRL-KED--NSYF----- 97
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGP 90
R ++ C+ CG+ LG++++DGP
Sbjct: 98 ----MHRIEVVCSRCGSHLGHVFEDGP 120
>gi|195452024|ref|XP_002073179.1| GK13287 [Drosophila willistoni]
gi|194169264|gb|EDW84165.1| GK13287 [Drosophila willistoni]
Length = 209
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 41/88 (46%), Gaps = 18/88 (20%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
+Y C C +L ++ Y + +PA N ++D K L ++ I
Sbjct: 48 VYQCIVCHQDL-FSSDTKYDSGCGWPAFND------VLDKGKVTLHRDASIPGMV----- 95
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGPP 91
RT+++C+ C A +G+++DDGPP
Sbjct: 96 ------RTEVRCSRCSAHMGHVFDDGPP 117
>gi|119355940|ref|YP_910584.1| methionine-R-sulfoxide reductase [Chlorobium phaeobacteroides DSM
266]
gi|119353289|gb|ABL64160.1| methionine-R-sulfoxide reductase [Chlorobium phaeobacteroides DSM
266]
Length = 180
Score = 38.1 bits (87), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 26/43 (60%), Gaps = 8/43 (18%)
Query: 57 FFETLDYWGIQRK--------RTKIKCNNCGALLGYIYDDGPP 91
FFET+ ++ + RT++ C CGA LG+++DDGPP
Sbjct: 117 FFETVRPGSVEYRTDMAFGMARTEVLCGRCGAHLGHVFDDGPP 159
>gi|268316982|ref|YP_003290701.1| methionine-R-sulfoxide reductase [Rhodothermus marinus DSM 4252]
gi|262334516|gb|ACY48313.1| methionine-R-sulfoxide reductase [Rhodothermus marinus DSM 4252]
Length = 136
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 36/88 (40%), Gaps = 19/88 (21%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
IY C CG L + + + +G +A ID T ET D
Sbjct: 46 IYRCAGCGLPL-------FSSEAKYDSGTGWPSFYAPIDPTHV------------ETSDD 86
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGPP 91
+ + R ++ C CG LG+++ DGPP
Sbjct: 87 YSLGMHRIEVHCAACGGHLGHVFPDGPP 114
>gi|167581597|ref|ZP_02374471.1| methionine-R-sulfoxide reductase [Burkholderia thailandensis TXDOH]
Length = 143
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 21/90 (23%)
Query: 2 ASIYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETL 61
A IY C CGT L + Y + +P+ F ID+ E +
Sbjct: 50 AGIYHCVVCGTAL-FESGAKYHSGCGWPS------YFKPIDAEVID-----------EKM 91
Query: 62 DY-WGIQRKRTKIKCNNCGALLGYIYDDGP 90
DY G+ R +++CN CGA LG++++DGP
Sbjct: 92 DYTHGMTR--VEVRCNQCGAHLGHVFEDGP 119
>gi|448383403|ref|ZP_21562665.1| Peptide methionine sulfoxide reductase msrB [Haloterrigena
thermotolerans DSM 11522]
gi|445659566|gb|ELZ12369.1| Peptide methionine sulfoxide reductase msrB [Haloterrigena
thermotolerans DSM 11522]
Length = 133
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 24/89 (26%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKF--RLEKEDKIRPFFETL 61
Y+C CG + L+ + F +G G SF DS + RL+ +R
Sbjct: 48 TYACAGCG-------AELFDSETKFESGC-GWPSFYDTDSDRVETRLDTSHGMR------ 93
Query: 62 DYWGIQRKRTKIKCNNCGALLGYIYDDGP 90
RT++ C NCG LG+++DDGP
Sbjct: 94 --------RTEVVCANCGGHLGHVFDDGP 114
>gi|433590393|ref|YP_007279889.1| methionine-R-sulfoxide reductase [Natrinema pellirubrum DSM 15624]
gi|448332204|ref|ZP_21521448.1| Peptide methionine sulfoxide reductase msrB [Natrinema pellirubrum
DSM 15624]
gi|433305173|gb|AGB30985.1| methionine-R-sulfoxide reductase [Natrinema pellirubrum DSM 15624]
gi|445627308|gb|ELY80632.1| Peptide methionine sulfoxide reductase msrB [Natrinema pellirubrum
DSM 15624]
Length = 133
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 24/89 (26%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKF--RLEKEDKIRPFFETL 61
Y+C CG + L+ + F +G G SF DS + RL+ +R
Sbjct: 48 TYACAGCG-------AELFDSETKFESGC-GWPSFYDTDSDRVETRLDTSHGMR------ 93
Query: 62 DYWGIQRKRTKIKCNNCGALLGYIYDDGP 90
RT++ C NCG LG+++DDGP
Sbjct: 94 --------RTEVVCANCGGHLGHVFDDGP 114
>gi|448321736|ref|ZP_21511211.1| Peptide methionine sulfoxide reductase msrB [Natronococcus
amylolyticus DSM 10524]
gi|445602788|gb|ELY56759.1| Peptide methionine sulfoxide reductase msrB [Natronococcus
amylolyticus DSM 10524]
Length = 132
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 20/86 (23%)
Query: 5 YSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDYW 64
Y+C CG L + + F +G G SF+ +D + + RP +
Sbjct: 48 YACVGCGATL-------FDSETKFDSG-CGWPSFSDVDDDRV------ETRP----DNSH 89
Query: 65 GIQRKRTKIKCNNCGALLGYIYDDGP 90
G+QR T++ C NCG LG+++DDGP
Sbjct: 90 GMQR--TEVLCANCGGHLGHVFDDGP 113
>gi|118593482|ref|ZP_01550862.1| peptide methionine sulfoxide reductase protein [Stappia aggregata
IAM 12614]
gi|118433961|gb|EAV40619.1| peptide methionine sulfoxide reductase protein [Stappia aggregata
IAM 12614]
Length = 149
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 8/43 (18%)
Query: 57 FFETLDYWGIQRK--------RTKIKCNNCGALLGYIYDDGPP 91
FFE +D I+ RT+I+C+NC A LG+++ DGPP
Sbjct: 81 FFEAVDQDAIRELEDQSHGMIRTEIRCSNCDAHLGHVFPDGPP 123
>gi|73668286|ref|YP_304301.1| methionine sulfoxide reductase B [Methanosarcina barkeri str.
Fusaro]
gi|121709119|sp|Q46EH1.1|MSRB_METBF RecName: Full=Peptide methionine sulfoxide reductase MsrB; AltName:
Full=Peptide-methionine (R)-S-oxide reductase
gi|72395448|gb|AAZ69721.1| peptide methionine sulfoxide reductase [Methanosarcina barkeri str.
Fusaro]
Length = 142
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 19/87 (21%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
+Y+C CG L+ + F +G + +I S + RL KED +F
Sbjct: 46 VYTCAACG-------QELFSSDTKFESGTGWPSFYDVISSDRVRL-KEDT--SYF----- 90
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGP 90
R ++ C+ CG+ LG++++DGP
Sbjct: 91 ----MNRIEVVCSRCGSHLGHVFEDGP 113
>gi|406967429|gb|EKD92506.1| hypothetical protein ACD_28C00414G0002 [uncultured bacterium]
Length = 124
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 13/22 (59%), Positives = 19/22 (86%)
Query: 69 KRTKIKCNNCGALLGYIYDDGP 90
+RT++ C NCGA LG+++DDGP
Sbjct: 82 RRTEVLCKNCGAHLGHVFDDGP 103
>gi|424903805|ref|ZP_18327318.1| methionine-R-sulfoxide reductase [Burkholderia thailandensis
MSMB43]
gi|390931678|gb|EIP89079.1| methionine-R-sulfoxide reductase [Burkholderia thailandensis
MSMB43]
Length = 161
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 41/90 (45%), Gaps = 21/90 (23%)
Query: 2 ASIYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETL 61
A IY C CGT L + Y + +P+ F ID E +
Sbjct: 68 AGIYHCVVCGTAL-FESGAKYHSGCGWPS------YFKPIDGEVID-----------EKM 109
Query: 62 DY-WGIQRKRTKIKCNNCGALLGYIYDDGP 90
DY G+ R +++CN CGA LG++++DGP
Sbjct: 110 DYTHGM--TRVEVRCNQCGAHLGHVFEDGP 137
>gi|148652625|ref|YP_001279718.1| methionine-R-sulfoxide reductase [Psychrobacter sp. PRwf-1]
gi|148571709|gb|ABQ93768.1| methionine-R-sulfoxide reductase [Psychrobacter sp. PRwf-1]
Length = 140
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 19/87 (21%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
+Y CK CG L ++S+ + A +P+ + TL + +D E LD
Sbjct: 52 VYRCKGCGAKL-FDSSNKFDAGCGWPSFD-ATLDESAVD----------------EHLDT 93
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGP 90
R R ++ C NCG LG+++ DGP
Sbjct: 94 SHGMR-RVEVTCRNCGGHLGHVFPDGP 119
>gi|294495313|ref|YP_003541806.1| methionine-R-sulfoxide reductase [Methanohalophilus mahii DSM 5219]
gi|292666312|gb|ADE36161.1| methionine-R-sulfoxide reductase [Methanohalophilus mahii DSM 5219]
Length = 132
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 19/87 (21%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
IY+C CG + ++S Y A +P SF + ED I E +
Sbjct: 46 IYTCAGCGQEM-FSSSSKYDAGTGWP-------SF-------WEAISEDNI----ERIPD 86
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGP 90
+ + KR ++ C+ CG LG+++DDGP
Sbjct: 87 YSLGMKRIEVICSRCGGHLGHVFDDGP 113
>gi|88803312|ref|ZP_01118838.1| methionine sulfoxide reductase B [Polaribacter irgensii 23-P]
gi|88780878|gb|EAR12057.1| methionine sulfoxide reductase B [Polaribacter irgensii 23-P]
Length = 159
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 23/31 (74%), Gaps = 2/31 (6%)
Query: 70 RTKIKCNNCGALLGYIYDDGPPAVDTPGQFH 100
RT++KCN CG+ LG+ +DDGP +T G+ H
Sbjct: 118 RTELKCNTCGSHLGHSFDDGPK--NTTGKRH 146
>gi|422321050|ref|ZP_16402101.1| methionine-R-sulfoxide reductase [Achromobacter xylosoxidans C54]
gi|317404109|gb|EFV84560.1| methionine-R-sulfoxide reductase [Achromobacter xylosoxidans C54]
Length = 109
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 21/32 (65%)
Query: 59 ETLDYWGIQRKRTKIKCNNCGALLGYIYDDGP 90
+TL+ RT + C+NCG LG+++DDGP
Sbjct: 58 DTLEDRSFGMTRTAVNCSNCGGHLGHVFDDGP 89
>gi|448606788|ref|ZP_21659136.1| methionine-R-sulfoxide reductase [Haloferax sulfurifontis ATCC
BAA-897]
gi|445738545|gb|ELZ90061.1| methionine-R-sulfoxide reductase [Haloferax sulfurifontis ATCC
BAA-897]
Length = 133
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 20/87 (22%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
+Y C CGT L ++ Y + +P SF + + L R +D
Sbjct: 46 VYRCAGCGTEL-FDSETKYDSNCGWP-------SFYAAEDSNIELR-----RDLSHGMD- 91
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGP 90
RT++ C+ CG LG+++DDGP
Sbjct: 92 ------RTEVVCSTCGGHLGHVFDDGP 112
>gi|195110237|ref|XP_001999688.1| GI24656 [Drosophila mojavensis]
gi|193916282|gb|EDW15149.1| GI24656 [Drosophila mojavensis]
Length = 211
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 41/88 (46%), Gaps = 18/88 (20%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
+Y C C +L ++ Y + +PA N ++D K L ++ I
Sbjct: 48 VYRCIVCHQDL-FSSDTKYDSGCGWPAFND------VLDKGKVTLHRDASIPGMV----- 95
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGPP 91
RT+++C+ C A +G+++DDGPP
Sbjct: 96 ------RTEVRCSKCSAHMGHVFDDGPP 117
>gi|33152370|ref|NP_873723.1| methionine sulfoxide reductase B [Haemophilus ducreyi 35000HP]
gi|33148593|gb|AAP96112.1| peptide methionine sulfoxide reductase MsrB [Haemophilus ducreyi
35000HP]
Length = 130
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 24/31 (77%)
Query: 61 LDYWGIQRKRTKIKCNNCGALLGYIYDDGPP 91
+D + + R RT+I+C +C + LG++++DGPP
Sbjct: 74 VDDYRLSRPRTEIRCAHCDSHLGHVFNDGPP 104
>gi|452124106|ref|ZP_21936690.1| methionine sulfoxide reductase B [Bordetella holmesii F627]
gi|452127491|ref|ZP_21940072.1| methionine sulfoxide reductase B [Bordetella holmesii H558]
gi|451923336|gb|EMD73477.1| methionine sulfoxide reductase B [Bordetella holmesii F627]
gi|451926771|gb|EMD76901.1| methionine sulfoxide reductase B [Bordetella holmesii H558]
Length = 133
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 37/88 (42%), Gaps = 19/88 (21%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
IY C CGT L + + F AG F ID ++ R E +
Sbjct: 44 IYRCVGCGTAL-------FASDTKFDAGCGWPSYFEPIDPSRVREETDSSH--------- 87
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGPP 91
RT++ CN C + LG+++ DGPP
Sbjct: 88 ---GMVRTEVLCNICDSHLGHVFPDGPP 112
>gi|91774369|ref|YP_544125.1| protein-methionine-S-oxide reductase [Methylobacillus flagellatus
KT]
gi|91708356|gb|ABE48284.1| Protein-methionine-S-oxide reductase [Methylobacillus flagellatus
KT]
Length = 130
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 37/88 (42%), Gaps = 19/88 (21%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
IY C CGT L + + F AG F +D R EK D
Sbjct: 44 IYHCVCCGTPL-------FASDTKFDAGCGWPSYFEALDPDNIR-EKAD----------- 84
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGPP 91
+ RT++ CN C A LG+++ DGPP
Sbjct: 85 YAYGMVRTEVICNVCDAHLGHVFPDGPP 112
>gi|322417833|ref|YP_004197056.1| methionine-R-sulfoxide reductase [Geobacter sp. M18]
gi|320124220|gb|ADW11780.1| methionine-R-sulfoxide reductase [Geobacter sp. M18]
Length = 171
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 40/88 (45%), Gaps = 21/88 (23%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAM-IDSTKFRLEKEDKIRPFFETLD 62
+Y C CG +L + + F +G G SF I + EK+ R FF T
Sbjct: 84 VYRCAGCGLDL-------FRSEDKFESGT-GWPSFTQPIAKENVKTEKD---RSFFTT-- 130
Query: 63 YWGIQRKRTKIKCNNCGALLGYIYDDGP 90
RT++ C CG LG+++DDGP
Sbjct: 131 -------RTEVLCRRCGGHLGHVFDDGP 151
>gi|448584181|ref|ZP_21647149.1| methionine-R-sulfoxide reductase [Haloferax gibbonsii ATCC 33959]
gi|445728584|gb|ELZ80187.1| methionine-R-sulfoxide reductase [Haloferax gibbonsii ATCC 33959]
Length = 133
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 20/87 (22%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
+Y C CGT L ++ Y + +P SF + + L R +D
Sbjct: 46 VYRCAGCGTEL-FDSETKYDSNCGWP-------SFYAAEDSNIELR-----RDLSHGMD- 91
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGP 90
RT++ C+ CG LG+++DDGP
Sbjct: 92 ------RTEVVCSTCGGHLGHVFDDGP 112
>gi|170292525|pdb|3CEZ|A Chain A, Crystal Structure Of Methionine-R-Sulfoxide Reductase From
Burkholderia Pseudomallei
gi|170292526|pdb|3CEZ|B Chain B, Crystal Structure Of Methionine-R-Sulfoxide Reductase From
Burkholderia Pseudomallei
gi|189096242|pdb|3CXK|A Chain A, 1.7 A Crystal Structure Of Methionine-R-Sulfoxide
Reductase From Burkholderia Pseudomallei:
Crystallization In A Microfluidic Crystal Card.
gi|189096243|pdb|3CXK|B Chain B, 1.7 A Crystal Structure Of Methionine-R-Sulfoxide
Reductase From Burkholderia Pseudomallei:
Crystallization In A Microfluidic Crystal Card
Length = 164
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 41/90 (45%), Gaps = 21/90 (23%)
Query: 2 ASIYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETL 61
A IY C CGT L + Y + +P+ F ID E +
Sbjct: 71 AGIYHCVVCGTAL-FESGAKYHSGCGWPS------YFKPIDGEVID-----------EKM 112
Query: 62 DY-WGIQRKRTKIKCNNCGALLGYIYDDGP 90
DY G+ R +++CN CGA LG++++DGP
Sbjct: 113 DYTHGM--TRVEVRCNQCGAHLGHVFEDGP 140
>gi|221207754|ref|ZP_03580761.1| methionine-R-sulfoxide reductase [Burkholderia multivorans CGD2]
gi|221172251|gb|EEE04691.1| methionine-R-sulfoxide reductase [Burkholderia multivorans CGD2]
Length = 171
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 11/70 (15%)
Query: 33 KGTLSFAMID----STKFRLEKEDKIRPFFETLDYW-------GIQRKRTKIKCNNCGAL 81
+GT + A D S+ + + F++ LD+ RT++ C CG
Sbjct: 82 RGTFACAGCDLALFSSSAKFDSHTGWPSFWQPLDHAVGTGADTSFGMVRTEVHCRRCGGH 141
Query: 82 LGYIYDDGPP 91
LG+++DDGPP
Sbjct: 142 LGHVFDDGPP 151
>gi|120436214|ref|YP_861900.1| peptide methionine sulfoxide reductase [Gramella forsetii KT0803]
gi|117578364|emb|CAL66833.1| peptide methionine sulfoxide reductase [Gramella forsetii KT0803]
Length = 141
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 14/21 (66%), Positives = 19/21 (90%)
Query: 70 RTKIKCNNCGALLGYIYDDGP 90
RT+I C+NCG+ LG+I+DDGP
Sbjct: 103 RTEILCSNCGSHLGHIFDDGP 123
>gi|83721190|ref|YP_442660.1| methionine-R-sulfoxide reductase [Burkholderia thailandensis E264]
gi|167619713|ref|ZP_02388344.1| methionine-R-sulfoxide reductase [Burkholderia thailandensis Bt4]
gi|257138873|ref|ZP_05587135.1| methionine-R-sulfoxide reductase [Burkholderia thailandensis E264]
gi|123536889|sp|Q2SWN9.1|MSRB_BURTA RecName: Full=Peptide methionine sulfoxide reductase MsrB; AltName:
Full=Peptide-methionine (R)-S-oxide reductase
gi|83655015|gb|ABC39078.1| methionine-R-sulfoxide reductase [Burkholderia thailandensis E264]
Length = 143
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 21/90 (23%)
Query: 2 ASIYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETL 61
A IY C CGT L + + + +G F ID+ E +
Sbjct: 50 AGIYHCVVCGTAL-------FESGAKYHSGCGWPSYFKPIDAEVID-----------EKM 91
Query: 62 DY-WGIQRKRTKIKCNNCGALLGYIYDDGP 90
DY G+ R +++CN CGA LG++++DGP
Sbjct: 92 DYTHGMTR--VEVRCNQCGAHLGHVFEDGP 119
>gi|167836285|ref|ZP_02463168.1| methionine-R-sulfoxide reductase [Burkholderia thailandensis
MSMB43]
Length = 143
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 41/90 (45%), Gaps = 21/90 (23%)
Query: 2 ASIYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETL 61
A IY C CGT L + Y + +P+ F ID E +
Sbjct: 50 AGIYHCVVCGTAL-FESGAKYHSGCGWPS------YFKPIDGEVID-----------EKM 91
Query: 62 DY-WGIQRKRTKIKCNNCGALLGYIYDDGP 90
DY G+ R +++CN CGA LG++++DGP
Sbjct: 92 DYTHGM--TRVEVRCNQCGAHLGHVFEDGP 119
>gi|423018034|ref|ZP_17008755.1| methionine-R-sulfoxide reductase 2 [Achromobacter xylosoxidans
AXX-A]
gi|338778921|gb|EGP43382.1| methionine-R-sulfoxide reductase 2 [Achromobacter xylosoxidans
AXX-A]
Length = 167
Score = 37.7 bits (86), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 21/32 (65%)
Query: 59 ETLDYWGIQRKRTKIKCNNCGALLGYIYDDGP 90
+TL+ RT + C+NCG LG+++DDGP
Sbjct: 116 DTLEDRSFGMTRTAVNCSNCGGHLGHVFDDGP 147
>gi|167562433|ref|ZP_02355349.1| methionine-R-sulfoxide reductase [Burkholderia oklahomensis EO147]
gi|167569615|ref|ZP_02362489.1| methionine-R-sulfoxide reductase [Burkholderia oklahomensis C6786]
Length = 143
Score = 37.7 bits (86), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 21/90 (23%)
Query: 2 ASIYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETL 61
A IY C CGT L + Y + +P+ F ID E +
Sbjct: 50 AGIYHCVVCGTAL-FESGAKYHSGCGWPS------YFKPIDGEVID-----------EKI 91
Query: 62 DY-WGIQRKRTKIKCNNCGALLGYIYDDGP 90
DY G+ R +++CN+CGA LG++++DGP
Sbjct: 92 DYTHGM--TRVEVRCNHCGAHLGHVFEDGP 119
>gi|359787964|ref|ZP_09290948.1| methionine-R-sulfoxide reductase [Mesorhizobium alhagi CCNWXJ12-2]
gi|359256169|gb|EHK59041.1| methionine-R-sulfoxide reductase [Mesorhizobium alhagi CCNWXJ12-2]
Length = 165
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 13/22 (59%), Positives = 17/22 (77%)
Query: 70 RTKIKCNNCGALLGYIYDDGPP 91
RT++ C CG LG+I+DDGPP
Sbjct: 124 RTEVHCRRCGGHLGHIFDDGPP 145
>gi|221215702|ref|ZP_03588663.1| methionine-R-sulfoxide reductase [Burkholderia multivorans CGD1]
gi|221164404|gb|EED96889.1| methionine-R-sulfoxide reductase [Burkholderia multivorans CGD1]
Length = 171
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 11/70 (15%)
Query: 33 KGTLSFAMID----STKFRLEKEDKIRPFFETLDYW-------GIQRKRTKIKCNNCGAL 81
+GT + A D S+ + + F++ LD+ RT++ C CG
Sbjct: 82 RGTFACAGCDLALFSSSAKFDSHTGWPSFWQPLDHAVGTGADTSFGMVRTEVHCRRCGGH 141
Query: 82 LGYIYDDGPP 91
LG+++DDGPP
Sbjct: 142 LGHVFDDGPP 151
>gi|383791847|ref|YP_005476421.1| methionine-R-sulfoxide reductase [Spirochaeta africana DSM 8902]
gi|383108381|gb|AFG38714.1| methionine-R-sulfoxide reductase [Spirochaeta africana DSM 8902]
Length = 140
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 12/22 (54%), Positives = 19/22 (86%)
Query: 70 RTKIKCNNCGALLGYIYDDGPP 91
RT+++C CGA LG++++DGPP
Sbjct: 96 RTEVRCRTCGAHLGHVFEDGPP 117
>gi|87198246|ref|YP_495503.1| protein-methionine-S-oxide reductase [Novosphingobium
aromaticivorans DSM 12444]
gi|87133927|gb|ABD24669.1| Protein-methionine-S-oxide reductase [Novosphingobium
aromaticivorans DSM 12444]
Length = 163
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 12/22 (54%), Positives = 18/22 (81%)
Query: 70 RTKIKCNNCGALLGYIYDDGPP 91
RT++ C+ CG LG+++DDGPP
Sbjct: 124 RTEVHCSQCGGHLGHVFDDGPP 145
>gi|126440967|ref|YP_001059333.1| methionine-R-sulfoxide reductase [Burkholderia pseudomallei 668]
gi|217421484|ref|ZP_03452988.1| methionine-R-sulfoxide reductase [Burkholderia pseudomallei 576]
gi|254179447|ref|ZP_04886046.1| methionine-R-sulfoxide reductase [Burkholderia pseudomallei 1655]
gi|254197778|ref|ZP_04904200.1| methionine-R-sulfoxide reductase [Burkholderia pseudomallei S13]
gi|403519028|ref|YP_006653161.1| methionine-R-sulfoxide reductase [Burkholderia pseudomallei BPC006]
gi|126220460|gb|ABN83966.1| methionine-R-sulfoxide reductase [Burkholderia pseudomallei 668]
gi|169654519|gb|EDS87212.1| methionine-R-sulfoxide reductase [Burkholderia pseudomallei S13]
gi|184209987|gb|EDU07030.1| methionine-R-sulfoxide reductase [Burkholderia pseudomallei 1655]
gi|217395226|gb|EEC35244.1| methionine-R-sulfoxide reductase [Burkholderia pseudomallei 576]
gi|403074670|gb|AFR16250.1| methionine-R-sulfoxide reductase [Burkholderia pseudomallei BPC006]
Length = 161
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 41/90 (45%), Gaps = 21/90 (23%)
Query: 2 ASIYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETL 61
A IY C CGT L + Y + +P+ F ID E +
Sbjct: 68 AGIYHCVVCGTAL-FESGAKYHSGCGWPS------YFKPIDGEVID-----------EKM 109
Query: 62 DY-WGIQRKRTKIKCNNCGALLGYIYDDGP 90
DY G+ R +++CN CGA LG++++DGP
Sbjct: 110 DYTHGMTR--VEVRCNQCGAHLGHVFEDGP 137
>gi|336178309|ref|YP_004583684.1| methionine-R-sulfoxide reductase [Frankia symbiont of Datisca
glomerata]
gi|334859289|gb|AEH09763.1| methionine-R-sulfoxide reductase [Frankia symbiont of Datisca
glomerata]
Length = 325
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 19/87 (21%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
IY C CG L ++S Y + +P SF E K+ E ++
Sbjct: 234 IYRCGACGNAL-FDSSTKYDSGSGWP-------SF-----------YEPKVADALELVED 274
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGP 90
RT+++C CG+ LG+++DDGP
Sbjct: 275 HSHGMIRTEVRCRRCGSHLGHVFDDGP 301
>gi|300691437|ref|YP_003752432.1| methionine sulfoxide reductase [Ralstonia solanacearum PSI07]
gi|299078497|emb|CBJ51150.1| methionine sulfoxide reductase [Ralstonia solanacearum PSI07]
gi|344169561|emb|CCA81921.1| methionine sulfoxide reductase [blood disease bacterium R229]
gi|344174696|emb|CCA86506.1| methionine sulfoxide reductase [Ralstonia syzygii R24]
Length = 128
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 19/87 (21%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
+Y C CGT L + ++ F AG FA I+ + EK D
Sbjct: 43 VYHCVCCGTPL-------FESSTKFDAGCGWPSYFAPING-EVIAEKTDHSHGMV----- 89
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGP 90
R +++C NCGA LG++++DGP
Sbjct: 90 ------RIEVQCKNCGAHLGHVFEDGP 110
>gi|452751147|ref|ZP_21950893.1| Peptide methionine sulfoxide reductase MsrB [alpha proteobacterium
JLT2015]
gi|451961297|gb|EMD83707.1| Peptide methionine sulfoxide reductase MsrB [alpha proteobacterium
JLT2015]
Length = 169
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 12/22 (54%), Positives = 18/22 (81%)
Query: 70 RTKIKCNNCGALLGYIYDDGPP 91
RT++ C CG+ LG+++DDGPP
Sbjct: 127 RTEVHCARCGSHLGHVFDDGPP 148
>gi|347968988|ref|XP_003436334.1| AGAP013286-PD [Anopheles gambiae str. PEST]
gi|333467749|gb|EGK96679.1| AGAP013286-PD [Anopheles gambiae str. PEST]
Length = 235
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 40/87 (45%), Gaps = 18/87 (20%)
Query: 5 YSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDYW 64
Y C C L ++ Y + +PA N ++D K L K+ I
Sbjct: 140 YICVVCSQEL-FSSETKYDSGCGWPAFND------VLDQGKVTLHKDPSIP--------- 183
Query: 65 GIQRKRTKIKCNNCGALLGYIYDDGPP 91
R RT+++C+ C A +G++++DGPP
Sbjct: 184 --GRVRTEVRCSKCAAHMGHVFEDGPP 208
>gi|21672944|ref|NP_661009.1| PilB-like protein [Chlorobium tepidum TLS]
gi|21646001|gb|AAM71351.1| PilB-related protein [Chlorobium tepidum TLS]
Length = 185
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 13/22 (59%), Positives = 18/22 (81%)
Query: 70 RTKIKCNNCGALLGYIYDDGPP 91
RT++ C CGA LG+++DDGPP
Sbjct: 138 RTEVLCGRCGAHLGHVFDDGPP 159
>gi|406965905|gb|EKD91490.1| hypothetical protein ACD_30C00003G0001 [uncultured bacterium]
Length = 128
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 22/36 (61%)
Query: 55 RPFFETLDYWGIQRKRTKIKCNNCGALLGYIYDDGP 90
R E L+ RT++ C NCGA LG+++DDGP
Sbjct: 73 REHVELLEDNSHGMVRTEVVCKNCGAHLGHLFDDGP 108
>gi|114569430|ref|YP_756110.1| methionine-R-sulfoxide reductase [Maricaulis maris MCS10]
gi|114339892|gb|ABI65172.1| methionine-R-sulfoxide reductase [Maricaulis maris MCS10]
Length = 135
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 38/86 (44%), Gaps = 19/86 (22%)
Query: 5 YSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDYW 64
Y CK C T L + H Y + +P+ + S + T F+L
Sbjct: 46 YHCKVCDTPL-FASDHKYDSGSGWPSFWQPLDSDTVETKTDFKL---------------- 88
Query: 65 GIQRKRTKIKCNNCGALLGYIYDDGP 90
+ RT+I C NCGA LG+++ DGP
Sbjct: 89 --RLPRTEIHCANCGAHLGHVFPDGP 112
>gi|392341430|ref|XP_003754335.1| PREDICTED: methionine-R-sulfoxide reductase B3, mitochondrial-like
[Rattus norvegicus]
gi|392349412|ref|XP_001055430.3| PREDICTED: methionine-R-sulfoxide reductase B3, mitochondrial-like
[Rattus norvegicus]
gi|149066829|gb|EDM16562.1| rCG49176 [Rattus norvegicus]
Length = 186
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 39/87 (44%), Gaps = 19/87 (21%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
IY C CGT L + + F +G+ G SF + S++ E D
Sbjct: 76 IYKCVVCGTPL-------FKSETKFDSGS-GWPSFHDVISSEA-----------IEFTDD 116
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGP 90
+ R + C+ CGA LG+I+DDGP
Sbjct: 117 FSYGMHRVETSCSQCGAHLGHIFDDGP 143
>gi|76811000|ref|YP_333853.1| methionine-R-sulfoxide reductase [Burkholderia pseudomallei 1710b]
gi|167845289|ref|ZP_02470797.1| methionine-R-sulfoxide reductase [Burkholderia pseudomallei B7210]
gi|167910523|ref|ZP_02497614.1| methionine-R-sulfoxide reductase [Burkholderia pseudomallei 112]
gi|254189164|ref|ZP_04895675.1| methionine-R-sulfoxide reductase [Burkholderia pseudomallei Pasteur
52237]
gi|254261846|ref|ZP_04952900.1| methionine-R-sulfoxide reductase [Burkholderia pseudomallei 1710a]
gi|386861442|ref|YP_006274391.1| methionine-R-sulfoxide reductase [Burkholderia pseudomallei 1026b]
gi|418533713|ref|ZP_13099572.1| methionine-R-sulfoxide reductase [Burkholderia pseudomallei 1026a]
gi|123598832|sp|Q3JRF0.1|MSRB_BURP1 RecName: Full=Peptide methionine sulfoxide reductase MsrB; AltName:
Full=Peptide-methionine (R)-S-oxide reductase
gi|76580453|gb|ABA49928.1| methionine-R-sulfoxide reductase [Burkholderia pseudomallei 1710b]
gi|157936843|gb|EDO92513.1| methionine-R-sulfoxide reductase [Burkholderia pseudomallei Pasteur
52237]
gi|254220535|gb|EET09919.1| methionine-R-sulfoxide reductase [Burkholderia pseudomallei 1710a]
gi|385360673|gb|EIF66587.1| methionine-R-sulfoxide reductase [Burkholderia pseudomallei 1026a]
gi|385658570|gb|AFI65993.1| methionine-R-sulfoxide reductase [Burkholderia pseudomallei 1026b]
Length = 143
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 41/90 (45%), Gaps = 21/90 (23%)
Query: 2 ASIYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETL 61
A IY C CGT L + Y + +P+ F ID E +
Sbjct: 50 AGIYHCVVCGTAL-FESGAKYHSGCGWPS------YFKPIDGEVID-----------EKM 91
Query: 62 DY-WGIQRKRTKIKCNNCGALLGYIYDDGP 90
DY G+ R +++CN CGA LG++++DGP
Sbjct: 92 DYTHGM--TRVEVRCNQCGAHLGHVFEDGP 119
>gi|313760640|ref|NP_001186507.1| methionine-R-sulfoxide reductase B3, mitochondrial [Gallus gallus]
gi|326911492|ref|XP_003202092.1| PREDICTED: methionine-R-sulfoxide reductase B3, mitochondrial-like
[Meleagris gallopavo]
Length = 184
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 39/88 (44%), Gaps = 21/88 (23%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETL-D 62
IY C CGT L + + F + N G SF D I P TL D
Sbjct: 76 IYKCVVCGTPL-------FKSETKFDS-NSGWPSFY------------DVISPDTITLTD 115
Query: 63 YWGIQRKRTKIKCNNCGALLGYIYDDGP 90
+ R +I C+ CGA LG+I+DDGP
Sbjct: 116 DFSYGMHRIEISCSQCGAHLGHIFDDGP 143
>gi|189499084|ref|YP_001958554.1| methionine-R-sulfoxide reductase [Chlorobium phaeobacteroides BS1]
gi|189494525|gb|ACE03073.1| methionine-R-sulfoxide reductase [Chlorobium phaeobacteroides BS1]
Length = 190
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 13/22 (59%), Positives = 18/22 (81%)
Query: 70 RTKIKCNNCGALLGYIYDDGPP 91
RT++ C CGA LG+++DDGPP
Sbjct: 149 RTEVICGRCGAHLGHVFDDGPP 170
>gi|126455298|ref|YP_001066601.1| methionine-R-sulfoxide reductase [Burkholderia pseudomallei 1106a]
gi|242317178|ref|ZP_04816194.1| methionine-R-sulfoxide reductase [Burkholderia pseudomallei 1106b]
gi|254297330|ref|ZP_04964783.1| methionine-R-sulfoxide reductase [Burkholderia pseudomallei 406e]
gi|126228940|gb|ABN92480.1| methionine-R-sulfoxide reductase [Burkholderia pseudomallei 1106a]
gi|157807046|gb|EDO84216.1| methionine-R-sulfoxide reductase [Burkholderia pseudomallei 406e]
gi|242140417|gb|EES26819.1| methionine-R-sulfoxide reductase [Burkholderia pseudomallei 1106b]
Length = 151
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 41/90 (45%), Gaps = 21/90 (23%)
Query: 2 ASIYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETL 61
A IY C CGT L + Y + +P+ F ID E +
Sbjct: 58 AGIYHCVVCGTAL-FESGAKYHSGCGWPS------YFKPIDGEVID-----------EKM 99
Query: 62 DY-WGIQRKRTKIKCNNCGALLGYIYDDGP 90
DY G+ R +++CN CGA LG++++DGP
Sbjct: 100 DYTHGMTR--VEVRCNQCGAHLGHVFEDGP 127
>gi|312129602|ref|YP_003996942.1| methionine-r-sulfoxide reductase [Leadbetterella byssophila DSM
17132]
gi|311906148|gb|ADQ16589.1| methionine-R-sulfoxide reductase [Leadbetterella byssophila DSM
17132]
Length = 148
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 38/87 (43%), Gaps = 19/87 (21%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
+Y C CG L+ + F +G + +D +K ++EK+
Sbjct: 61 VYKCAGCG-------EQLFTSDQKFDSGCGWPSFYDALDKSKIKVEKD------------ 101
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGP 90
+ R +I C CGA LG+++DDGP
Sbjct: 102 FSHGMIREEIMCKKCGAHLGHVFDDGP 128
>gi|448621652|ref|ZP_21668475.1| methionine-R-sulfoxide reductase [Haloferax denitrificans ATCC
35960]
gi|445755156|gb|EMA06547.1| methionine-R-sulfoxide reductase [Haloferax denitrificans ATCC
35960]
Length = 133
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 20/87 (22%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
+Y C CGT L ++ Y + +P SF + + L R +D
Sbjct: 46 VYRCAGCGTEL-FDSETKYDSNCGWP-------SFYAAEDSNIELR-----RDLSHGMD- 91
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGP 90
RT++ C+ CG LG+++DDGP
Sbjct: 92 ------RTEVVCSACGGHLGHVFDDGP 112
>gi|163851188|ref|YP_001639231.1| methionine-R-sulfoxide reductase [Methylobacterium extorquens PA1]
gi|163662793|gb|ABY30160.1| methionine-R-sulfoxide reductase [Methylobacterium extorquens PA1]
Length = 198
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 7/55 (12%)
Query: 43 STKFRLEKEDKIRPFFETL-DYWGIQ------RKRTKIKCNNCGALLGYIYDDGP 90
S+K + E FFETL G Q +RT++ C CG LG++++DGP
Sbjct: 120 SSKTKFESGTGWPSFFETLPGAVGTQVDSAYGMRRTEVHCRRCGGHLGHVFEDGP 174
>gi|416966675|ref|ZP_11936810.1| methionine-R-sulfoxide reductase [Burkholderia sp. TJI49]
gi|325521366|gb|EGD00209.1| methionine-R-sulfoxide reductase [Burkholderia sp. TJI49]
Length = 171
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 12/22 (54%), Positives = 17/22 (77%)
Query: 70 RTKIKCNNCGALLGYIYDDGPP 91
RT++ C CG LG+++DDGPP
Sbjct: 130 RTEVHCRRCGGHLGHVFDDGPP 151
>gi|406873575|gb|EKD23691.1| Methionine-R-sulfoxide reductase [uncultured bacterium]
Length = 125
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 19/87 (21%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
+Y+C CGT L + + F +G G SF + + + KED
Sbjct: 36 VYTCTICGTEL-------FSSDTKFDSGT-GWPSFTEPVNLEHVILKEDTAG-------- 79
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGP 90
G+QR T++ C CGA LG++++DGP
Sbjct: 80 -GMQR--TEVVCKTCGAHLGHVFNDGP 103
>gi|354469515|ref|XP_003497174.1| PREDICTED: methionine-R-sulfoxide reductase B3, mitochondrial-like
[Cricetulus griseus]
Length = 186
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 39/87 (44%), Gaps = 19/87 (21%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
IY C CGT L + + F +G+ G SF + S++ E D
Sbjct: 76 IYKCVVCGTPL-------FKSETKFDSGS-GWPSFHDVISSEA-----------IEFTDD 116
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGP 90
+ R + C+ CGA LG+I+DDGP
Sbjct: 117 FSYGMHRVETSCSQCGAHLGHIFDDGP 143
>gi|218530056|ref|YP_002420872.1| methionine-R-sulfoxide reductase [Methylobacterium extorquens CM4]
gi|218522359|gb|ACK82944.1| methionine-R-sulfoxide reductase [Methylobacterium extorquens CM4]
Length = 167
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 7/55 (12%)
Query: 43 STKFRLEKEDKIRPFFETL-DYWGIQ------RKRTKIKCNNCGALLGYIYDDGP 90
S+K + E FFETL G Q +RT++ C CG LG++++DGP
Sbjct: 89 SSKTKFESGTGWPSFFETLPGAVGTQVDSAYGMRRTEVHCRRCGGHLGHVFEDGP 143
>gi|134290947|ref|YP_001114716.1| methionine-R-sulfoxide reductase [Burkholderia vietnamiensis G4]
gi|387905862|ref|YP_006336199.1| Peptide methionine sulfoxide reductase MsrB [Burkholderia sp.
KJ006]
gi|134134136|gb|ABO58461.1| methionine-R-sulfoxide reductase [Burkholderia vietnamiensis G4]
gi|387580754|gb|AFJ89468.1| Peptide methionine sulfoxide reductase MsrB [Burkholderia sp.
KJ006]
Length = 176
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 12/22 (54%), Positives = 17/22 (77%)
Query: 70 RTKIKCNNCGALLGYIYDDGPP 91
RT++ C CG LG+++DDGPP
Sbjct: 135 RTEVHCRRCGGHLGHVFDDGPP 156
>gi|254255655|ref|ZP_04948971.1| hypothetical protein BDAG_05003 [Burkholderia dolosa AUO158]
gi|124901392|gb|EAY72142.1| hypothetical protein BDAG_05003 [Burkholderia dolosa AUO158]
Length = 181
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 12/22 (54%), Positives = 17/22 (77%)
Query: 70 RTKIKCNNCGALLGYIYDDGPP 91
RT++ C CG LG+++DDGPP
Sbjct: 140 RTEVHCRRCGGHLGHVFDDGPP 161
>gi|24645801|ref|NP_731523.1| SelR, isoform E [Drosophila melanogaster]
gi|34922549|sp|Q8INK9.3|MSRB_DROME RecName: Full=Methionine-R-sulfoxide reductase B1; AltName:
Full=Selenoprotein R
gi|23170948|gb|AAN13491.1| SelR, isoform E [Drosophila melanogaster]
Length = 208
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 42/87 (48%), Gaps = 7/87 (8%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
+Y C C +L ++ Y + +PA N ++D K L ++ I L
Sbjct: 90 VYQCIVCHQDL-FSSETKYDSGCGWPAFND------VLDKGKVTLHRDASIPGGNILLLI 142
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGP 90
+R RT+++C C A +G++++DGP
Sbjct: 143 AHPERIRTEVRCARCNAHMGHVFEDGP 169
>gi|420242460|ref|ZP_14746501.1| methionine-R-sulfoxide reductase [Rhizobium sp. CF080]
gi|398067407|gb|EJL58921.1| methionine-R-sulfoxide reductase [Rhizobium sp. CF080]
Length = 176
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 12/22 (54%), Positives = 18/22 (81%)
Query: 70 RTKIKCNNCGALLGYIYDDGPP 91
RT+++C NCG LG+++ DGPP
Sbjct: 136 RTEVRCTNCGGHLGHVFPDGPP 157
>gi|115360700|ref|YP_777837.1| methionine-R-sulfoxide reductase [Burkholderia ambifaria AMMD]
gi|115286028|gb|ABI91503.1| methionine-R-sulfoxide reductase [Burkholderia ambifaria AMMD]
Length = 171
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 12/22 (54%), Positives = 17/22 (77%)
Query: 70 RTKIKCNNCGALLGYIYDDGPP 91
RT++ C CG LG+++DDGPP
Sbjct: 130 RTEVHCRRCGGHLGHVFDDGPP 151
>gi|240138340|ref|YP_002962812.1| methionine sulfoxide reductase [Methylobacterium extorquens AM1]
gi|418062446|ref|ZP_12700231.1| methionine-R-sulfoxide reductase [Methylobacterium extorquens DSM
13060]
gi|240008309|gb|ACS39535.1| methionine sulfoxide reductase (Peptide- methionine (R)-S-oxide
reductase) [Methylobacterium extorquens AM1]
gi|373564006|gb|EHP90150.1| methionine-R-sulfoxide reductase [Methylobacterium extorquens DSM
13060]
Length = 167
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 7/55 (12%)
Query: 43 STKFRLEKEDKIRPFFETL-DYWGIQ------RKRTKIKCNNCGALLGYIYDDGP 90
S+K + E FFETL G Q +RT++ C CG LG++++DGP
Sbjct: 89 SSKTKFESGTGWPSFFETLPGAVGTQVDSAYGMRRTEVHCRRCGGHLGHVFEDGP 143
>gi|170702548|ref|ZP_02893424.1| methionine-R-sulfoxide reductase [Burkholderia ambifaria IOP40-10]
gi|170132536|gb|EDT00988.1| methionine-R-sulfoxide reductase [Burkholderia ambifaria IOP40-10]
Length = 171
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 12/22 (54%), Positives = 17/22 (77%)
Query: 70 RTKIKCNNCGALLGYIYDDGPP 91
RT++ C CG LG+++DDGPP
Sbjct: 130 RTEVHCRRCGGHLGHVFDDGPP 151
>gi|171322025|ref|ZP_02910903.1| methionine-R-sulfoxide reductase [Burkholderia ambifaria MEX-5]
gi|171092671|gb|EDT37965.1| methionine-R-sulfoxide reductase [Burkholderia ambifaria MEX-5]
Length = 175
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 12/22 (54%), Positives = 17/22 (77%)
Query: 70 RTKIKCNNCGALLGYIYDDGPP 91
RT++ C CG LG+++DDGPP
Sbjct: 134 RTEVHCRRCGGHLGHVFDDGPP 155
>gi|172064998|ref|YP_001815710.1| methionine-R-sulfoxide reductase [Burkholderia ambifaria MC40-6]
gi|171997240|gb|ACB68157.1| methionine-R-sulfoxide reductase [Burkholderia ambifaria MC40-6]
Length = 171
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 12/22 (54%), Positives = 17/22 (77%)
Query: 70 RTKIKCNNCGALLGYIYDDGPP 91
RT++ C CG LG+++DDGPP
Sbjct: 130 RTEVHCRRCGGHLGHVFDDGPP 151
>gi|254560884|ref|YP_003067979.1| methionine sulfoxide reductase [Methylobacterium extorquens DM4]
gi|254268162|emb|CAX24055.1| methionine sulfoxide reductase (Peptide-methionine (R)-S-oxide
reductase) [Methylobacterium extorquens DM4]
Length = 167
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 7/55 (12%)
Query: 43 STKFRLEKEDKIRPFFETL-DYWGIQ------RKRTKIKCNNCGALLGYIYDDGP 90
S+K + E FFETL G Q +RT++ C CG LG++++DGP
Sbjct: 89 SSKTKFESGTGWPSFFETLPGAVGTQIDSAYGMRRTEVHCRRCGGHLGHVFEDGP 143
>gi|386389309|ref|ZP_10074125.1| methionine-R-sulfoxide reductase [Haemophilus paraphrohaemolyticus
HK411]
gi|385695688|gb|EIG26239.1| methionine-R-sulfoxide reductase [Haemophilus paraphrohaemolyticus
HK411]
Length = 131
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 22/31 (70%)
Query: 61 LDYWGIQRKRTKIKCNNCGALLGYIYDDGPP 91
LD + I R RT+I+C C + LG++++DGP
Sbjct: 75 LDDYSIGRHRTEIRCGTCDSHLGHVFNDGPA 105
>gi|375142758|ref|YP_005003407.1| methionine-R-sulfoxide reductase [Mycobacterium rhodesiae NBB3]
gi|359823379|gb|AEV76192.1| methionine-R-sulfoxide reductase [Mycobacterium rhodesiae NBB3]
Length = 163
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 18/26 (69%)
Query: 66 IQRKRTKIKCNNCGALLGYIYDDGPP 91
I RT++ C CG LG+++DDGPP
Sbjct: 120 IGMSRTEVLCRRCGGHLGHVFDDGPP 145
>gi|89890275|ref|ZP_01201785.1| methionine sulfoxide reductase, SelR [Flavobacteria bacterium
BBFL7]
gi|89517190|gb|EAS19847.1| methionine sulfoxide reductase, SelR [Flavobacteria bacterium
BBFL7]
Length = 170
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 23/31 (74%), Gaps = 2/31 (6%)
Query: 70 RTKIKCNNCGALLGYIYDDGPPAVDTPGQFH 100
RT++KCN CG+ LG+ ++DGP DT G+ H
Sbjct: 121 RTELKCNTCGSHLGHEFNDGPS--DTTGKRH 149
>gi|186474206|ref|YP_001861548.1| methionine-R-sulfoxide reductase [Burkholderia phymatum STM815]
gi|184196538|gb|ACC74502.1| methionine-R-sulfoxide reductase [Burkholderia phymatum STM815]
Length = 174
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 11/57 (19%)
Query: 43 STKFRLEKEDKIRPFFETLDY---------WGIQRKRTKIKCNNCGALLGYIYDDGP 90
S++ + + F+ LD+ WG+ RT++ C CG LG+++DDGP
Sbjct: 99 SSRTKFDSHTGWPSFWAPLDHAVATREDGSWGM--VRTEVHCRRCGGHLGHVFDDGP 153
>gi|334186401|ref|NP_001190689.1| uncharacterized protein [Arabidopsis thaliana]
gi|332657228|gb|AEE82628.1| uncharacterized protein [Arabidopsis thaliana]
Length = 153
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 51/115 (44%), Gaps = 4/115 (3%)
Query: 13 NLNLNTSHLYPATV---YFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDYWGIQRK 69
++N ++++ +T+ Y + G +SF ID +F E + P F WG+ R
Sbjct: 35 HVNYSSTNRITSTIGSKYGKSMKSGIISFFNIDEGRFSQVDEFQCMPHFSRYS-WGLFRH 93
Query: 70 RTKIKCNNCGALLGYIYDDGPPAVDTPGQFHFGPSQVIPRYPRYRLKTKALRIST 124
RTK+ C C +G + P Q S I +Y ++ ++L+ S+
Sbjct: 94 RTKLLCRKCNNYIGNASQEKAPEYALVTQNSDPTSPRIGSVTKYDIRIRSLQPSS 148
>gi|448455343|ref|ZP_21594523.1| methionine-R-sulfoxide reductase [Halorubrum lipolyticum DSM 21995]
gi|445813945|gb|EMA63918.1| methionine-R-sulfoxide reductase [Halorubrum lipolyticum DSM 21995]
Length = 139
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 20/86 (23%)
Query: 5 YSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDYW 64
Y C+ CGT L + Y + +PA F +E+ + +T
Sbjct: 55 YRCRACGTVL-FDAETKYESGCGWPA---------------FYAAEEESVTTTVDT---- 94
Query: 65 GIQRKRTKIKCNNCGALLGYIYDDGP 90
+RT+++C NC + LG+++DDGP
Sbjct: 95 SHGMRRTEVRCANCDSHLGHVFDDGP 120
>gi|229821959|ref|YP_002883485.1| methionine-R-sulfoxide reductase [Beutenbergia cavernae DSM 12333]
gi|229567872|gb|ACQ81723.1| methionine-R-sulfoxide reductase [Beutenbergia cavernae DSM 12333]
Length = 133
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 39/87 (44%), Gaps = 19/87 (21%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
+YSC+ CG + L+ +T F + FA DS L ED+
Sbjct: 45 VYSCRACG-------AELFRSTTKFDSHCGWPSFFAPQDSDAVEL-IEDRT--------- 87
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGP 90
+ R +++C CG+ LG+++DD P
Sbjct: 88 --LGMVRVEVRCATCGSHLGHVFDDAP 112
>gi|421480566|ref|ZP_15928187.1| methionine-R-sulfoxide reductase, partial [Burkholderia multivorans
CF2]
gi|400220919|gb|EJO51413.1| methionine-R-sulfoxide reductase, partial [Burkholderia multivorans
CF2]
Length = 143
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 12/22 (54%), Positives = 17/22 (77%)
Query: 70 RTKIKCNNCGALLGYIYDDGPP 91
RT++ C CG LG+++DDGPP
Sbjct: 102 RTEVHCRRCGGHLGHVFDDGPP 123
>gi|260426309|ref|ZP_05780288.1| methionine-R-sulfoxide reductase [Citreicella sp. SE45]
gi|260420801|gb|EEX14052.1| methionine-R-sulfoxide reductase [Citreicella sp. SE45]
Length = 154
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 42/91 (46%), Gaps = 24/91 (26%)
Query: 2 ASIYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSF--AMIDSTKFRLEKEDKIRPFFE 59
A + CK C L YP+ F +G G SF A+ D+ + + + R FF
Sbjct: 67 AGTFLCKGCDLPL-------YPSKTKFDSGT-GWPSFWQALPDAVETKAD-----RSFFM 113
Query: 60 TLDYWGIQRKRTKIKCNNCGALLGYIYDDGP 90
T RT+ C CG+ LG+I+DDGP
Sbjct: 114 T---------RTECHCRRCGSHLGHIFDDGP 135
>gi|242008412|ref|XP_002425000.1| Methionine-R-sulfoxide reductase, putative [Pediculus humanus
corporis]
gi|212508629|gb|EEB12262.1| Methionine-R-sulfoxide reductase, putative [Pediculus humanus
corporis]
Length = 142
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 38/89 (42%), Gaps = 7/89 (7%)
Query: 2 ASIYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETL 61
+ Y+C C L+ + F +G +ID K +L K+ L
Sbjct: 40 SGTYTCVVC-------NEELFSSNTKFESGCGWPAFSDVIDQGKVKLSKDTSHIGANLLL 92
Query: 62 DYWGIQRKRTKIKCNNCGALLGYIYDDGP 90
RT++ C NCGA LG++++DGP
Sbjct: 93 IIANPGMVRTEVTCANCGAHLGHVFNDGP 121
>gi|418300226|ref|ZP_12912053.1| methionine sulfoxide reductase B [Agrobacterium tumefaciens
CCNWGS0286]
gi|355533848|gb|EHH03165.1| methionine sulfoxide reductase B [Agrobacterium tumefaciens
CCNWGS0286]
Length = 135
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 13/22 (59%), Positives = 18/22 (81%)
Query: 70 RTKIKCNNCGALLGYIYDDGPP 91
RT+I+C NCG LG+++ DGPP
Sbjct: 96 RTEIRCANCGGHLGHVFPDGPP 117
>gi|154251974|ref|YP_001412798.1| methionine-R-sulfoxide reductase [Parvibaculum lavamentivorans
DS-1]
gi|154155924|gb|ABS63141.1| methionine-R-sulfoxide reductase [Parvibaculum lavamentivorans
DS-1]
Length = 167
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 12/22 (54%), Positives = 17/22 (77%)
Query: 70 RTKIKCNNCGALLGYIYDDGPP 91
RT++ C CG LG+++DDGPP
Sbjct: 125 RTEVHCRRCGGHLGHVFDDGPP 146
>gi|374594574|ref|ZP_09667578.1| methionine-R-sulfoxide reductase [Gillisia limnaea DSM 15749]
gi|373869213|gb|EHQ01211.1| methionine-R-sulfoxide reductase [Gillisia limnaea DSM 15749]
Length = 131
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 13/22 (59%), Positives = 19/22 (86%)
Query: 69 KRTKIKCNNCGALLGYIYDDGP 90
+RT+I C NCG+ LG+++DDGP
Sbjct: 92 ERTEILCANCGSHLGHVFDDGP 113
>gi|408788689|ref|ZP_11200406.1| methionine sulfoxide reductase B [Rhizobium lupini HPC(L)]
gi|424909793|ref|ZP_18333170.1| methionine-R-sulfoxide reductase [Rhizobium leguminosarum bv.
viciae USDA 2370]
gi|392845824|gb|EJA98346.1| methionine-R-sulfoxide reductase [Rhizobium leguminosarum bv.
viciae USDA 2370]
gi|408485505|gb|EKJ93842.1| methionine sulfoxide reductase B [Rhizobium lupini HPC(L)]
Length = 135
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 13/22 (59%), Positives = 18/22 (81%)
Query: 70 RTKIKCNNCGALLGYIYDDGPP 91
RT+I+C NCG LG+++ DGPP
Sbjct: 96 RTEIRCANCGGHLGHVFPDGPP 117
>gi|255079452|ref|XP_002503306.1| predicted protein [Micromonas sp. RCC299]
gi|226518572|gb|ACO64564.1| predicted protein [Micromonas sp. RCC299]
Length = 229
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 21/32 (65%)
Query: 59 ETLDYWGIQRKRTKIKCNNCGALLGYIYDDGP 90
E DY I RT+++C NC LG+++DDGP
Sbjct: 175 EVPDYSIIFLPRTEVRCANCQGHLGHVFDDGP 206
>gi|347968990|ref|XP_003436335.1| AGAP013286-PA [Anopheles gambiae str. PEST]
gi|347968992|ref|XP_003436336.1| AGAP013286-PB [Anopheles gambiae str. PEST]
gi|347968994|ref|XP_003436337.1| AGAP013286-PC [Anopheles gambiae str. PEST]
gi|333467746|gb|EGK96676.1| AGAP013286-PA [Anopheles gambiae str. PEST]
gi|333467747|gb|EGK96677.1| AGAP013286-PB [Anopheles gambiae str. PEST]
gi|333467748|gb|EGK96678.1| AGAP013286-PC [Anopheles gambiae str. PEST]
Length = 136
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 40/87 (45%), Gaps = 18/87 (20%)
Query: 5 YSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDYW 64
Y C C L ++ Y + +PA N ++D K L K+ I
Sbjct: 41 YICVVCSQEL-FSSETKYDSGCGWPAFND------VLDQGKVTLHKDPSI---------- 83
Query: 65 GIQRKRTKIKCNNCGALLGYIYDDGPP 91
R RT+++C+ C A +G++++DGPP
Sbjct: 84 -PGRVRTEVRCSKCAAHMGHVFEDGPP 109
>gi|291389503|ref|XP_002711360.1| PREDICTED: methionine sulfoxide reductase B3-like [Oryctolagus
cuniculus]
Length = 185
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 19/87 (21%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
IY C CGT L + + F +G+ G SF + S++ + F + Y
Sbjct: 76 IYKCVVCGTPL-------FKSETKFDSGS-GWPSFHDVISSE--------VITFTDDFSY 119
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGP 90
G+ R T C+ CGA LG+I+DDGP
Sbjct: 120 -GMHRVETS--CSQCGAHLGHIFDDGP 143
>gi|15888246|ref|NP_353927.1| transcriptional regulator [Agrobacterium fabrum str. C58]
gi|32129755|sp|Q8UGX7.1|MSRB_AGRT5 RecName: Full=Peptide methionine sulfoxide reductase MsrB; AltName:
Full=Peptide-methionine (R)-S-oxide reductase
gi|15155902|gb|AAK86712.1| transcriptional regulator [Agrobacterium fabrum str. C58]
Length = 135
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 13/22 (59%), Positives = 18/22 (81%)
Query: 70 RTKIKCNNCGALLGYIYDDGPP 91
RT+I+C NCG LG+++ DGPP
Sbjct: 96 RTEIRCANCGGHLGHVFPDGPP 117
>gi|24645804|ref|NP_731524.1| SelR, isoform B [Drosophila melanogaster]
gi|7299377|gb|AAF54569.1| SelR, isoform B [Drosophila melanogaster]
gi|41058206|gb|AAR99145.1| LD07760p [Drosophila melanogaster]
Length = 166
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 42/87 (48%), Gaps = 7/87 (8%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
+Y C C +L ++ Y + +PA N ++D K L ++ I L
Sbjct: 48 VYQCIVCHQDL-FSSETKYDSGCGWPAFND------VLDKGKVTLHRDASIPGGNILLLI 100
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGP 90
+R RT+++C C A +G++++DGP
Sbjct: 101 AHPERIRTEVRCARCNAHMGHVFEDGP 127
>gi|335038239|ref|ZP_08531525.1| methionine sulfoxide reductase B [Agrobacterium sp. ATCC 31749]
gi|333790341|gb|EGL61752.1| methionine sulfoxide reductase B [Agrobacterium sp. ATCC 31749]
Length = 135
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 13/22 (59%), Positives = 18/22 (81%)
Query: 70 RTKIKCNNCGALLGYIYDDGPP 91
RT+I+C NCG LG+++ DGPP
Sbjct: 96 RTEIRCANCGGHLGHVFPDGPP 117
>gi|406948788|gb|EKD79427.1| hypothetical protein ACD_41C00074G0001 [uncultured bacterium]
Length = 128
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 21/90 (23%)
Query: 2 ASIYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKED-KIRPFFET 60
+ +Y C CG + L+ +T F +G G SF + KE+ ++RP
Sbjct: 39 SGMYHCAACG-------NELFSSTAKFDSGT-GWPSF------DDPVNKENVELRP---- 80
Query: 61 LDYWGIQRKRTKIKCNNCGALLGYIYDDGP 90
+ +G+ R T++ C NCG+ LG+++DDGP
Sbjct: 81 DNAYGMTR--TEVLCKNCGSHLGHVFDDGP 108
>gi|397781483|ref|YP_006545956.1| peptide-methionine (R)-S-oxide reductase [Methanoculleus bourgensis
MS2]
gi|396939985|emb|CCJ37240.1| peptide-methionine (R)-S-oxide reductase [Methanoculleus bourgensis
MS2]
Length = 157
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 16/52 (30%)
Query: 70 RTKIKCNNCGALLGYIYDDGPPAVDTPGQFHFGPSQVIPRYPRYRLKTKALR 121
RT++ C C A LG+++DDGPP P Y RY + + +LR
Sbjct: 115 RTEVLCRRCDAHLGHVFDDGPP----------------PNYKRYCMNSASLR 150
>gi|357024237|ref|ZP_09086398.1| methionine sulfoxide reductase B [Mesorhizobium amorphae
CCNWGS0123]
gi|355543923|gb|EHH13038.1| methionine sulfoxide reductase B [Mesorhizobium amorphae
CCNWGS0123]
Length = 167
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 12/22 (54%), Positives = 17/22 (77%)
Query: 70 RTKIKCNNCGALLGYIYDDGPP 91
RT++ C CG LG+++DDGPP
Sbjct: 126 RTEVHCRRCGGHLGHVFDDGPP 147
>gi|424813900|ref|ZP_18239078.1| methionine-R-sulfoxide reductase [Candidatus Nanosalina sp.
J07AB43]
gi|339757516|gb|EGQ42773.1| methionine-R-sulfoxide reductase [Candidatus Nanosalina sp.
J07AB43]
Length = 117
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 24/87 (27%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
++ CK+CG L ++ Y + +P+ D+ K +EK R
Sbjct: 35 VFKCKKCGQEL-FDSDTKYESGTGWPS---------FWDAEKESVEKRKDGR-------- 76
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGP 90
RT++ C++CG LG++++DGP
Sbjct: 77 ------RTEVVCSSCGGHLGHVFNDGP 97
>gi|209543851|ref|YP_002276080.1| methionine-R-sulfoxide reductase [Gluconacetobacter diazotrophicus
PAl 5]
gi|209531528|gb|ACI51465.1| methionine-R-sulfoxide reductase [Gluconacetobacter diazotrophicus
PAl 5]
Length = 153
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 19/22 (86%)
Query: 69 KRTKIKCNNCGALLGYIYDDGP 90
+RT+++C CG+ LG+++DDGP
Sbjct: 113 ERTEVRCATCGSHLGHVFDDGP 134
>gi|448469588|ref|ZP_21600270.1| methionine-R-sulfoxide reductase [Halorubrum kocurii JCM 14978]
gi|445808925|gb|EMA58976.1| methionine-R-sulfoxide reductase [Halorubrum kocurii JCM 14978]
Length = 139
Score = 37.0 bits (84), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 20/86 (23%)
Query: 5 YSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDYW 64
Y C+ CGT L + Y + +PA F +E+ + +T
Sbjct: 55 YRCRACGTVL-FDAETKYESGCGWPA---------------FYAAEEESVTTTVDT---- 94
Query: 65 GIQRKRTKIKCNNCGALLGYIYDDGP 90
+RT+++C NC + LG+++DDGP
Sbjct: 95 SHGMRRTEVRCANCDSHLGHVFDDGP 120
>gi|195604318|gb|ACG23989.1| hypothetical protein [Zea mays]
Length = 155
Score = 37.0 bits (84), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 52/129 (40%), Gaps = 29/129 (22%)
Query: 2 ASIYSCKECGTNLNLNTSH-------LYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKI 54
A Y C CG +L L +S Y A +G ++F ID +F E
Sbjct: 24 AVTYCCGACGYDLRLRSSDRNTAGIVGAGGAAYGRAARRGVVAFDAIDDARFGHADE--- 80
Query: 55 RPFFETLDYWGIQR--KRTKIKCNNCGALLGYIYDDGPPAVDTPGQFHFGPSQVIPRYPR 112
F +D + +RT++ C CGA LG+ YDD Q R PR
Sbjct: 81 ---FRCVDLRARRLFVRRTRLLCRKCGAGLGFGYDDR--------------GQDGARPPR 123
Query: 113 YRLKTKALR 121
Y +K +AL+
Sbjct: 124 YDIKIRALQ 132
>gi|325292285|ref|YP_004278149.1| peptide methionine sulfoxide reductase [Agrobacterium sp. H13-3]
gi|418406444|ref|ZP_12979763.1| methionine sulfoxide reductase B [Agrobacterium tumefaciens 5A]
gi|325060138|gb|ADY63829.1| peptide methionine sulfoxide reductase [Agrobacterium sp. H13-3]
gi|358006937|gb|EHJ99260.1| methionine sulfoxide reductase B [Agrobacterium tumefaciens 5A]
Length = 135
Score = 37.0 bits (84), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 13/22 (59%), Positives = 18/22 (81%)
Query: 70 RTKIKCNNCGALLGYIYDDGPP 91
RT+I+C NCG LG+++ DGPP
Sbjct: 96 RTEIRCANCGGHLGHVFPDGPP 117
>gi|448491671|ref|ZP_21608511.1| methionine-R-sulfoxide reductase [Halorubrum californiensis DSM
19288]
gi|445692671|gb|ELZ44842.1| methionine-R-sulfoxide reductase [Halorubrum californiensis DSM
19288]
Length = 136
Score = 37.0 bits (84), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 20/86 (23%)
Query: 5 YSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDYW 64
Y+C+ CGT L Y + +PA F +E+ + +T
Sbjct: 52 YNCRACGTVL-FEAETKYESGCGWPA---------------FYAAEEESVTTTVDT---- 91
Query: 65 GIQRKRTKIKCNNCGALLGYIYDDGP 90
+RT+++C NC + LG+++DDGP
Sbjct: 92 SHGMRRTEVRCANCDSHLGHVFDDGP 117
>gi|86133273|ref|ZP_01051855.1| peptide methionine sulfoxide reductase [Polaribacter sp. MED152]
gi|85820136|gb|EAQ41283.1| peptide methionine sulfoxide reductase [Polaribacter sp. MED152]
Length = 160
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 61 LDYWGIQRKRTKIKCNNCGALLGYIYDDGPPAVDTPGQFH 100
+DY I RT++KCN CG LG+ +DDGP T G+ H
Sbjct: 111 VDY-KIGYARTELKCNTCGGHLGHSFDDGP--AKTTGKRH 147
>gi|299066763|emb|CBJ37957.1| methionine sulfoxide reductase [Ralstonia solanacearum CMR15]
Length = 128
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 38/88 (43%), Gaps = 19/88 (21%)
Query: 3 SIYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLD 62
+Y C CGT L + A+ F AG FA I+ + EK D
Sbjct: 42 GVYHCVCCGTPL-------FEASTKFDAGCGWPSYFAPING-EVIAEKTDHSHGMV---- 89
Query: 63 YWGIQRKRTKIKCNNCGALLGYIYDDGP 90
R +++C CGA LG++++DGP
Sbjct: 90 -------RIEVQCKQCGAHLGHVFEDGP 110
>gi|118575468|ref|YP_875211.1| peptide methionine sulfoxide reductase [Cenarchaeum symbiosum A]
gi|118193989|gb|ABK76907.1| peptide methionine sulfoxide reductase [Cenarchaeum symbiosum A]
Length = 125
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 21/33 (63%)
Query: 58 FETLDYWGIQRKRTKIKCNNCGALLGYIYDDGP 90
E ++ + RT++ C CGA LG+++DDGP
Sbjct: 70 IEHIEDRSLGMMRTEVNCGGCGAHLGHVFDDGP 102
>gi|357520153|ref|XP_003630365.1| hypothetical protein MTR_8g094790 [Medicago truncatula]
gi|355524387|gb|AET04841.1| hypothetical protein MTR_8g094790 [Medicago truncatula]
Length = 150
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 41/90 (45%), Gaps = 12/90 (13%)
Query: 5 YSCKECGTNLNLNTSHLYPATVYFPAGNKGT---------LSFAMIDSTKFRLEKEDKIR 55
YSC CG LNLN+S+ T+ N G +SF +D T+F ++
Sbjct: 28 YSCGSCGYELNLNSSN-RNTTLSLTDSNYGKSIKKRKRCLISFFSVDETRFTQIQQFSF- 85
Query: 56 PFFETLDYWGIQR-KRTKIKCNNCGALLGY 84
F + ++ QR TK+ C NC LGY
Sbjct: 86 SFSWRISFFNFQRTTTTKLLCRNCRNHLGY 115
>gi|83816782|ref|YP_445931.1| methionine-R-sulfoxide reductase [Salinibacter ruber DSM 13855]
gi|294507842|ref|YP_003571900.1| peptide methionine sulfoxide reductase [Salinibacter ruber M8]
gi|83758176|gb|ABC46289.1| methionine-R-sulfoxide reductase [Salinibacter ruber DSM 13855]
gi|294344170|emb|CBH24948.1| peptide methionine sulfoxide reductase [Salinibacter ruber M8]
Length = 134
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 12/22 (54%), Positives = 19/22 (86%)
Query: 69 KRTKIKCNNCGALLGYIYDDGP 90
+RT++ C+ CGA LG+++DDGP
Sbjct: 93 RRTEVVCDECGAHLGHLFDDGP 114
>gi|309781982|ref|ZP_07676712.1| methionine-R-sulfoxide reductase [Ralstonia sp. 5_7_47FAA]
gi|404377675|ref|ZP_10982775.1| peptide methionine sulfoxide reductase msrB [Ralstonia sp.
5_2_56FAA]
gi|308919048|gb|EFP64715.1| methionine-R-sulfoxide reductase [Ralstonia sp. 5_7_47FAA]
gi|348611691|gb|EGY61331.1| peptide methionine sulfoxide reductase msrB [Ralstonia sp.
5_2_56FAA]
Length = 128
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 19/87 (21%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
+Y+C CGT L + ++ F AG F I+ EK D+
Sbjct: 43 VYNCVCCGTPL-------FESSTKFDAGCGWPSYFQPINGEVID-EKTDRSHGML----- 89
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGP 90
R +++C NCGA LG++++DGP
Sbjct: 90 ------RIEVQCKNCGAHLGHVFEDGP 110
>gi|183220568|ref|YP_001838564.1| peptide methionine sulfoxide reductase MsrB [Leptospira biflexa
serovar Patoc strain 'Patoc 1 (Paris)']
gi|189910678|ref|YP_001962233.1| hypothetical protein LBF_1131 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167775354|gb|ABZ93655.1| Conserved hypothetical protein [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167778990|gb|ABZ97288.1| Peptide methionine sulfoxide reductase MsrB [Leptospira biflexa
serovar Patoc strain 'Patoc 1 (Paris)']
Length = 126
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 13/21 (61%), Positives = 18/21 (85%)
Query: 70 RTKIKCNNCGALLGYIYDDGP 90
RT+I+C NCGA LG+++ DGP
Sbjct: 86 RTEIQCQNCGAHLGHVFPDGP 106
>gi|29840989|gb|AAP06002.1| SJCHGC00704 protein [Schistosoma japonicum]
gi|226470008|emb|CAX70285.1| peptide methionine sulfoxide reductase [Schistosoma japonicum]
gi|226489088|emb|CAX74893.1| peptide methionine sulfoxide reductase [Schistosoma japonicum]
gi|226489090|emb|CAX74894.1| peptide methionine sulfoxide reductase [Schistosoma japonicum]
Length = 137
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 38/86 (44%), Gaps = 12/86 (13%)
Query: 5 YSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDYW 64
Y C CG+ L ++S Y + +P+ K S DS + ED
Sbjct: 44 YLCVCCGSKL-FDSSSKYDSGSGWPSFYKAHGSDGRDDSQTNIIRTEDN----------- 91
Query: 65 GIQRKRTKIKCNNCGALLGYIYDDGP 90
+ R +I C CGA LG++++DGP
Sbjct: 92 SLDNMRIEISCKQCGAHLGHVFEDGP 117
>gi|241663097|ref|YP_002981457.1| methionine sulfoxide reductase B [Ralstonia pickettii 12D]
gi|240865124|gb|ACS62785.1| methionine-R-sulfoxide reductase [Ralstonia pickettii 12D]
Length = 128
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 19/87 (21%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
+Y+C CGT L + ++ F AG F I+ EK D+
Sbjct: 43 VYNCVCCGTPL-------FESSTKFDAGCGWPSYFQPINGEVID-EKTDRSHGML----- 89
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGP 90
R +++C NCGA LG++++DGP
Sbjct: 90 ------RIEVQCKNCGAHLGHVFEDGP 110
>gi|150025767|ref|YP_001296593.1| protein-methionine-S-oxide reductase MrsB2 [Flavobacterium
psychrophilum JIP02/86]
gi|149772308|emb|CAL43786.1| Probable protein-methionine-S-oxide reductase MrsB2 [Flavobacterium
psychrophilum JIP02/86]
Length = 128
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 14/21 (66%), Positives = 18/21 (85%)
Query: 70 RTKIKCNNCGALLGYIYDDGP 90
RT+I C NCG+ LG+I+DDGP
Sbjct: 91 RTEIVCANCGSHLGHIFDDGP 111
>gi|448448965|ref|ZP_21591463.1| methionine-R-sulfoxide reductase [Halorubrum litoreum JCM 13561]
gi|445814057|gb|EMA64029.1| methionine-R-sulfoxide reductase [Halorubrum litoreum JCM 13561]
Length = 135
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 19/22 (86%)
Query: 69 KRTKIKCNNCGALLGYIYDDGP 90
+RT+++C NC + LG+++DDGP
Sbjct: 96 RRTEVRCANCDSHLGHVFDDGP 117
>gi|187928543|ref|YP_001899030.1| methionine sulfoxide reductase B [Ralstonia pickettii 12J]
gi|187725433|gb|ACD26598.1| methionine-R-sulfoxide reductase [Ralstonia pickettii 12J]
Length = 128
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 19/87 (21%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
+Y+C CGT L + ++ F AG F I+ EK D+
Sbjct: 43 VYNCVCCGTPL-------FESSTKFDAGCGWPSYFQPINGEVID-EKTDRSHGML----- 89
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGP 90
R +++C NCGA LG++++DGP
Sbjct: 90 ------RIEVQCKNCGAHLGHVFEDGP 110
>gi|157130355|ref|XP_001655675.1| hypothetical protein AaeL_AAEL002620 [Aedes aegypti]
gi|108881935|gb|EAT46160.1| AAEL002620-PA [Aedes aegypti]
Length = 160
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 20/23 (86%)
Query: 68 RKRTKIKCNNCGALLGYIYDDGP 90
R RT+++C+ CGA +G++++DGP
Sbjct: 99 RMRTEVRCSKCGAHMGHVFEDGP 121
>gi|298250023|ref|ZP_06973827.1| methionine-R-sulfoxide reductase [Ktedonobacter racemifer DSM
44963]
gi|297548027|gb|EFH81894.1| methionine-R-sulfoxide reductase [Ktedonobacter racemifer DSM
44963]
Length = 136
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 21/29 (72%), Gaps = 2/29 (6%)
Query: 70 RTKIKCNNCGALLGYIYDDGPPAVDTPGQ 98
R ++ C NCG+ LG+++DDGP DT GQ
Sbjct: 93 RVEVTCKNCGSHLGHVFDDGP--RDTTGQ 119
>gi|432942700|ref|XP_004083040.1| PREDICTED: methionine-R-sulfoxide reductase B3, mitochondrial-like
[Oryzias latipes]
Length = 197
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 19/86 (22%)
Query: 5 YSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDYW 64
Y+C CGT + + + F +G+ G SF F + KED + D +
Sbjct: 86 YTCAVCGTPI-------FSSGSKFDSGS-GWPSF-------FDIMKEDSV----SLTDDF 126
Query: 65 GIQRKRTKIKCNNCGALLGYIYDDGP 90
R + C+ CGA LG+++DDGP
Sbjct: 127 AHGMHRVEATCSQCGAHLGHLFDDGP 152
>gi|390577137|ref|ZP_10257171.1| methionine-R-sulfoxide reductase [Burkholderia terrae BS001]
gi|389930896|gb|EIM92990.1| methionine-R-sulfoxide reductase [Burkholderia terrae BS001]
Length = 177
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 19/27 (70%), Gaps = 2/27 (7%)
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGP 90
WG+ RT++ C CG LG+++DDGP
Sbjct: 132 WGM--VRTEVHCGRCGGHLGHVFDDGP 156
>gi|448439378|ref|ZP_21588019.1| methionine-R-sulfoxide reductase [Halorubrum saccharovorum DSM
1137]
gi|445691429|gb|ELZ43620.1| methionine-R-sulfoxide reductase [Halorubrum saccharovorum DSM
1137]
Length = 139
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 20/86 (23%)
Query: 5 YSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDYW 64
Y C+ CGT L + Y + +PA F +E+ + +T
Sbjct: 55 YRCRACGTLL-FDAETKYESGCGWPA---------------FYAAEEESVTTTVDT---- 94
Query: 65 GIQRKRTKIKCNNCGALLGYIYDDGP 90
+RT+++C NC + LG+++DDGP
Sbjct: 95 SHGMRRTEVRCANCDSHLGHVFDDGP 120
>gi|448423788|ref|ZP_21582121.1| methionine-R-sulfoxide reductase [Halorubrum terrestre JCM 10247]
gi|448506628|ref|ZP_21614584.1| methionine-R-sulfoxide reductase [Halorubrum distributum JCM 9100]
gi|448524341|ref|ZP_21619323.1| methionine-R-sulfoxide reductase [Halorubrum distributum JCM 10118]
gi|445683045|gb|ELZ35450.1| methionine-R-sulfoxide reductase [Halorubrum terrestre JCM 10247]
gi|445699578|gb|ELZ51602.1| methionine-R-sulfoxide reductase [Halorubrum distributum JCM 9100]
gi|445700411|gb|ELZ52412.1| methionine-R-sulfoxide reductase [Halorubrum distributum JCM 10118]
Length = 135
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 19/22 (86%)
Query: 69 KRTKIKCNNCGALLGYIYDDGP 90
+RT+++C NC + LG+++DDGP
Sbjct: 96 RRTEVRCANCDSHLGHVFDDGP 117
>gi|387902462|ref|YP_006332801.1| peptide methionine sulfoxide reductase MsrB [Burkholderia sp.
KJ006]
gi|387577354|gb|AFJ86070.1| Peptide methionine sulfoxide reductase MsrB [Burkholderia sp.
KJ006]
Length = 143
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 19/21 (90%)
Query: 70 RTKIKCNNCGALLGYIYDDGP 90
R +++CN+CGA LG++++DGP
Sbjct: 99 RVEVRCNHCGAHLGHVFEDGP 119
>gi|167586948|ref|ZP_02379336.1| methionine-R-sulfoxide reductase [Burkholderia ubonensis Bu]
Length = 143
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 19/21 (90%)
Query: 70 RTKIKCNNCGALLGYIYDDGP 90
R +++CN+CGA LG++++DGP
Sbjct: 99 RVEVRCNHCGAHLGHVFEDGP 119
>gi|448479371|ref|ZP_21604223.1| methionine-R-sulfoxide reductase [Halorubrum arcis JCM 13916]
gi|445822649|gb|EMA72413.1| methionine-R-sulfoxide reductase [Halorubrum arcis JCM 13916]
Length = 135
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 19/22 (86%)
Query: 69 KRTKIKCNNCGALLGYIYDDGP 90
+RT+++C NC + LG+++DDGP
Sbjct: 96 RRTEVRCANCDSHLGHVFDDGP 117
>gi|432942702|ref|XP_004083041.1| PREDICTED: methionine-R-sulfoxide reductase B3, mitochondrial-like
[Oryzias latipes]
Length = 225
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 19/86 (22%)
Query: 5 YSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDYW 64
Y+C CGT + + + F +G+ G SF F + KED + D +
Sbjct: 114 YTCAVCGTPI-------FSSGSKFDSGS-GWPSF-------FDIMKEDSV----SLTDDF 154
Query: 65 GIQRKRTKIKCNNCGALLGYIYDDGP 90
R + C+ CGA LG+++DDGP
Sbjct: 155 AHGMHRVEATCSQCGAHLGHLFDDGP 180
>gi|390179489|ref|XP_001359909.3| GA19702, isoform B [Drosophila pseudoobscura pseudoobscura]
gi|388859873|gb|EAL29061.3| GA19702, isoform B [Drosophila pseudoobscura pseudoobscura]
Length = 167
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 42/87 (48%), Gaps = 7/87 (8%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
+Y C C +L ++ Y + +PA N ++D K L ++ I L
Sbjct: 48 VYQCIVCHQDL-FSSDTKYDSGCGWPAFND------VLDKGKVTLHRDASIPGGNILLLI 100
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGP 90
+R RT+++C C A +G++++DGP
Sbjct: 101 AHPERIRTEVRCARCNAHMGHVFEDGP 127
>gi|372210197|ref|ZP_09497999.1| peptide methionine sulfoxide reductase [Flavobacteriaceae bacterium
S85]
Length = 146
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 25/90 (27%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAM---IDSTKFRLEKEDKIRPFFET 60
IYSC CG +L + +T+ F +G G SF I++ K+ +
Sbjct: 62 IYSCICCGNDL-------FDSTIKFDSGT-GWPSFTQPIKINAIKYLKDN---------- 103
Query: 61 LDYWGIQRKRTKIKCNNCGALLGYIYDDGP 90
+ R R +I+CN C + LG+++ DGP
Sbjct: 104 ----SLGRSRVEIQCNQCDSHLGHVFPDGP 129
>gi|262171737|ref|ZP_06039415.1| hypothetical protein VII_002560 [Vibrio mimicus MB-451]
gi|261892813|gb|EEY38799.1| hypothetical protein VII_002560 [Vibrio mimicus MB-451]
Length = 149
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 19/26 (73%)
Query: 66 IQRKRTKIKCNNCGALLGYIYDDGPP 91
+ R R +++CN C + LG+++ DGPP
Sbjct: 105 LARARVEVRCNTCASHLGHVFPDGPP 130
>gi|194332939|ref|YP_002014799.1| methionine-R-sulfoxide reductase [Prosthecochloris aestuarii DSM
271]
gi|194310757|gb|ACF45152.1| methionine-R-sulfoxide reductase [Prosthecochloris aestuarii DSM
271]
Length = 150
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 19/23 (82%)
Query: 69 KRTKIKCNNCGALLGYIYDDGPP 91
+RT++ C CG+ LG+++DDGPP
Sbjct: 106 RRTEVLCGRCGSHLGHLFDDGPP 128
>gi|448345861|ref|ZP_21534750.1| Peptide methionine sulfoxide reductase msrB [Natrinema altunense
JCM 12890]
gi|445633794|gb|ELY86981.1| Peptide methionine sulfoxide reductase msrB [Natrinema altunense
JCM 12890]
Length = 132
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 12/22 (54%), Positives = 18/22 (81%)
Query: 69 KRTKIKCNNCGALLGYIYDDGP 90
+RT++ C NCG LG+++DDGP
Sbjct: 93 RRTEVVCANCGGHLGHVFDDGP 114
>gi|430002776|emb|CCF18557.1| Peptide methionine sulfoxide reductase msrB [Rhizobium sp.]
Length = 136
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 12/22 (54%), Positives = 18/22 (81%)
Query: 70 RTKIKCNNCGALLGYIYDDGPP 91
RT+++C NCG LG+++ DGPP
Sbjct: 96 RTEVRCANCGGHLGHVFPDGPP 117
>gi|296282086|ref|ZP_06860084.1| putative methionine sulfoxide reductase, SelR [Citromicrobium
bathyomarinum JL354]
Length = 164
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 19/89 (21%)
Query: 2 ASIYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETL 61
A ++C CG N ++ H Y + +P+ + S A+ ST ++
Sbjct: 76 AGTFACAGCG-NAVYSSKHKYDSGTGWPSFWQPIRSGAVGTSTDYK-------------- 120
Query: 62 DYWGIQRKRTKIKCNNCGALLGYIYDDGP 90
I RT++ C CG LG+I++DGP
Sbjct: 121 ----IGVPRTEVHCARCGGHLGHIFNDGP 145
>gi|222479742|ref|YP_002565979.1| methionine-R-sulfoxide reductase [Halorubrum lacusprofundi ATCC
49239]
gi|222452644|gb|ACM56909.1| methionine-R-sulfoxide reductase [Halorubrum lacusprofundi ATCC
49239]
Length = 134
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 19/22 (86%)
Query: 69 KRTKIKCNNCGALLGYIYDDGP 90
+RT+++C NC + LG+++DDGP
Sbjct: 94 RRTEVRCANCDSHLGHVFDDGP 115
>gi|71907518|ref|YP_285105.1| methionine sulfoxide reductase B [Dechloromonas aromatica RCB]
gi|123627472|sp|Q47EU6.1|MSRB_DECAR RecName: Full=Peptide methionine sulfoxide reductase MsrB; AltName:
Full=Peptide-methionine (R)-S-oxide reductase
gi|71847139|gb|AAZ46635.1| Methionine sulfoxide reductase B [Dechloromonas aromatica RCB]
Length = 132
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 12/21 (57%), Positives = 19/21 (90%)
Query: 70 RTKIKCNNCGALLGYIYDDGP 90
RT++ C++CGA LG+++DDGP
Sbjct: 91 RTEVTCHDCGAHLGHVFDDGP 111
>gi|310820860|ref|YP_003953218.1| peptide methionine sulfoxide reductase msrb [Stigmatella aurantiaca
DW4/3-1]
gi|309393932|gb|ADO71391.1| Peptide methionine sulfoxide reductase MsrB [Stigmatella aurantiaca
DW4/3-1]
Length = 175
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 12/22 (54%), Positives = 17/22 (77%)
Query: 70 RTKIKCNNCGALLGYIYDDGPP 91
RT++ C CG LG+++DDGPP
Sbjct: 136 RTEVVCARCGGHLGHVFDDGPP 157
>gi|162148539|ref|YP_001603000.1| peptide methionine sulfoxide reductase msrB [Gluconacetobacter
diazotrophicus PAl 5]
gi|161787116|emb|CAP56706.1| putative peptide methionine sulfoxide reductase msrB
[Gluconacetobacter diazotrophicus PAl 5]
Length = 140
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 19/22 (86%)
Query: 69 KRTKIKCNNCGALLGYIYDDGP 90
+RT+++C CG+ LG+++DDGP
Sbjct: 100 ERTEVRCATCGSHLGHVFDDGP 121
>gi|448529393|ref|ZP_21620531.1| methionine-R-sulfoxide reductase [Halorubrum hochstenium ATCC
700873]
gi|445709155|gb|ELZ60988.1| methionine-R-sulfoxide reductase [Halorubrum hochstenium ATCC
700873]
Length = 142
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 20/86 (23%)
Query: 5 YSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDYW 64
Y C+ CGT L Y + +PA F +E+ + +T
Sbjct: 58 YRCRACGTVL-FEAETKYESGCGWPA---------------FYAAEEENVTTTIDT---- 97
Query: 65 GIQRKRTKIKCNNCGALLGYIYDDGP 90
+RT+++C NC + LG+++DDGP
Sbjct: 98 SHGMRRTEVRCANCDSHLGHVFDDGP 123
>gi|402566292|ref|YP_006615637.1| methionine-R-sulfoxide reductase [Burkholderia cepacia GG4]
gi|402247489|gb|AFQ47943.1| methionine-R-sulfoxide reductase [Burkholderia cepacia GG4]
Length = 143
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 19/21 (90%)
Query: 70 RTKIKCNNCGALLGYIYDDGP 90
R +++CN+CGA LG++++DGP
Sbjct: 99 RVEVRCNHCGAHLGHVFEDGP 119
>gi|390179493|ref|XP_003736911.1| GA19702, isoform E [Drosophila pseudoobscura pseudoobscura]
gi|388859875|gb|EIM52984.1| GA19702, isoform E [Drosophila pseudoobscura pseudoobscura]
Length = 203
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 42/87 (48%), Gaps = 7/87 (8%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
+Y C C +L ++ Y + +PA N ++D K L ++ I L
Sbjct: 84 VYQCIVCHQDL-FSSDTKYDSGCGWPAFND------VLDKGKVTLHRDASIPGGNILLLI 136
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGP 90
+R RT+++C C A +G++++DGP
Sbjct: 137 AHPERIRTEVRCARCNAHMGHVFEDGP 163
>gi|261211041|ref|ZP_05925331.1| conserved domain frequently associated with peptide methionine
sulfoxide reductase [Vibrio sp. RC341]
gi|260840016|gb|EEX66616.1| conserved domain frequently associated with peptide methionine
sulfoxide reductase [Vibrio sp. RC341]
Length = 148
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 19/26 (73%)
Query: 66 IQRKRTKIKCNNCGALLGYIYDDGPP 91
+ R R +++CN C + LG+++ DGPP
Sbjct: 105 LARARVEVRCNTCASHLGHVFPDGPP 130
>gi|258624412|ref|ZP_05719359.1| PilB-related protein [Vibrio mimicus VM603]
gi|258583259|gb|EEW08061.1| PilB-related protein [Vibrio mimicus VM603]
Length = 149
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 19/26 (73%)
Query: 66 IQRKRTKIKCNNCGALLGYIYDDGPP 91
+ R R +++CN C + LG+++ DGPP
Sbjct: 105 LARARVEVRCNTCASHLGHVFPDGPP 130
>gi|172060874|ref|YP_001808526.1| methionine-R-sulfoxide reductase [Burkholderia ambifaria MC40-6]
gi|226710047|sp|B1YRN6.1|MSRB_BURA4 RecName: Full=Peptide methionine sulfoxide reductase MsrB; AltName:
Full=Peptide-methionine (R)-S-oxide reductase
gi|171993391|gb|ACB64310.1| methionine-R-sulfoxide reductase [Burkholderia ambifaria MC40-6]
Length = 143
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 19/21 (90%)
Query: 70 RTKIKCNNCGALLGYIYDDGP 90
R +++CN+CGA LG++++DGP
Sbjct: 99 RVEVRCNHCGAHLGHVFEDGP 119
>gi|399577048|ref|ZP_10770802.1| methionine-r-sulfoxide reductase [Halogranum salarium B-1]
gi|399237830|gb|EJN58760.1| methionine-r-sulfoxide reductase [Halogranum salarium B-1]
Length = 138
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 40/87 (45%), Gaps = 20/87 (22%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
+Y CK CGT L +S Y ++ +P SF + + E T
Sbjct: 51 VYKCKGCGTVL-FESSTKYDSSCGWP-------SFYAAEDANIKTE----------TDTS 92
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGP 90
G+ +R +++C C + LG+++DDGP
Sbjct: 93 HGM--RRIEVRCEGCDSHLGHVFDDGP 117
>gi|170692427|ref|ZP_02883590.1| methionine-R-sulfoxide reductase [Burkholderia graminis C4D1M]
gi|170142857|gb|EDT11022.1| methionine-R-sulfoxide reductase [Burkholderia graminis C4D1M]
Length = 140
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 38/87 (43%), Gaps = 19/87 (21%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
IY C CGT L + + F AG F I+ + EK D+
Sbjct: 54 IYDCVCCGTPL-------FESDTKFDAGCGWPSYFKPING-EVIAEKTDRSHGML----- 100
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGP 90
R +++C NCGA LG++++DGP
Sbjct: 101 ------RIEVQCKNCGAHLGHVFEDGP 121
>gi|170733268|ref|YP_001765215.1| methionine-R-sulfoxide reductase [Burkholderia cenocepacia MC0-3]
gi|254247982|ref|ZP_04941303.1| hypothetical protein BCPG_02801 [Burkholderia cenocepacia PC184]
gi|226710048|sp|B1JTT6.1|MSRB_BURCC RecName: Full=Peptide methionine sulfoxide reductase MsrB; AltName:
Full=Peptide-methionine (R)-S-oxide reductase
gi|124872758|gb|EAY64474.1| hypothetical protein BCPG_02801 [Burkholderia cenocepacia PC184]
gi|169816510|gb|ACA91093.1| methionine-R-sulfoxide reductase [Burkholderia cenocepacia MC0-3]
Length = 143
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 19/21 (90%)
Query: 70 RTKIKCNNCGALLGYIYDDGP 90
R +++CN+CGA LG++++DGP
Sbjct: 99 RVEVRCNHCGAHLGHVFEDGP 119
>gi|399064056|ref|ZP_10747130.1| methionine-R-sulfoxide reductase [Novosphingobium sp. AP12]
gi|398031227|gb|EJL24619.1| methionine-R-sulfoxide reductase [Novosphingobium sp. AP12]
Length = 162
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 12/22 (54%), Positives = 17/22 (77%)
Query: 70 RTKIKCNNCGALLGYIYDDGPP 91
RT++ C CG LG+++DDGPP
Sbjct: 123 RTEVHCARCGGHLGHVFDDGPP 144
>gi|387792410|ref|YP_006257475.1| methionine-R-sulfoxide reductase [Solitalea canadensis DSM 3403]
gi|379655243|gb|AFD08299.1| methionine-R-sulfoxide reductase [Solitalea canadensis DSM 3403]
Length = 167
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 14/21 (66%), Positives = 17/21 (80%)
Query: 70 RTKIKCNNCGALLGYIYDDGP 90
RT+I C NCG LG+I+DDGP
Sbjct: 126 RTEILCANCGGHLGHIFDDGP 146
>gi|416941361|ref|ZP_11934541.1| methionine-R-sulfoxide reductase [Burkholderia sp. TJI49]
gi|325524397|gb|EGD02480.1| methionine-R-sulfoxide reductase [Burkholderia sp. TJI49]
Length = 143
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 19/21 (90%)
Query: 70 RTKIKCNNCGALLGYIYDDGP 90
R +++CN+CGA LG++++DGP
Sbjct: 99 RVEVRCNHCGAHLGHVFEDGP 119
>gi|206560345|ref|YP_002231109.1| peptide methionine sulfoxide reductase [Burkholderia cenocepacia
J2315]
gi|421866879|ref|ZP_16298541.1| Peptide methionine sulfoxide reductase MsrB [Burkholderia
cenocepacia H111]
gi|444358514|ref|ZP_21159910.1| methionine-R-sulfoxide reductase [Burkholderia cenocepacia BC7]
gi|444367145|ref|ZP_21167134.1| methionine-R-sulfoxide reductase [Burkholderia cenocepacia
K56-2Valvano]
gi|226710050|sp|B4EBK9.1|MSRB_BURCJ RecName: Full=Peptide methionine sulfoxide reductase MsrB; AltName:
Full=Peptide-methionine (R)-S-oxide reductase
gi|198036386|emb|CAR52282.1| peptide methionine sulfoxide reductase [Burkholderia cenocepacia
J2315]
gi|358073043|emb|CCE49419.1| Peptide methionine sulfoxide reductase MsrB [Burkholderia
cenocepacia H111]
gi|443603423|gb|ELT71431.1| methionine-R-sulfoxide reductase [Burkholderia cenocepacia
K56-2Valvano]
gi|443603869|gb|ELT71847.1| methionine-R-sulfoxide reductase [Burkholderia cenocepacia BC7]
Length = 143
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 19/21 (90%)
Query: 70 RTKIKCNNCGALLGYIYDDGP 90
R +++CN+CGA LG++++DGP
Sbjct: 99 RVEVRCNHCGAHLGHVFEDGP 119
>gi|126735401|ref|ZP_01751147.1| Protein-methionine-S-oxide reductase [Roseobacter sp. CCS2]
gi|126715956|gb|EBA12821.1| Protein-methionine-S-oxide reductase [Roseobacter sp. CCS2]
Length = 165
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 19/25 (76%)
Query: 66 IQRKRTKIKCNNCGALLGYIYDDGP 90
+ R RT++ C CG+ LG+I+DDGP
Sbjct: 123 LLRVRTEVHCRRCGSHLGHIFDDGP 147
>gi|78066679|ref|YP_369448.1| protein-methionine-S-oxide reductase [Burkholderia sp. 383]
gi|123568259|sp|Q39FG2.1|MSRB_BURS3 RecName: Full=Peptide methionine sulfoxide reductase MsrB; AltName:
Full=Peptide-methionine (R)-S-oxide reductase
gi|77967424|gb|ABB08804.1| protein-methionine-S-oxide reductase [Burkholderia sp. 383]
Length = 143
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 19/21 (90%)
Query: 70 RTKIKCNNCGALLGYIYDDGP 90
R +++CN+CGA LG++++DGP
Sbjct: 99 RVEVRCNHCGAHLGHVFEDGP 119
>gi|258620228|ref|ZP_05715267.1| PilB-related protein [Vibrio mimicus VM573]
gi|424807825|ref|ZP_18233227.1| PilB-related protein [Vibrio mimicus SX-4]
gi|449145184|ref|ZP_21775993.1| Peptide methionine sulfoxide reductase MsrB [Vibrio mimicus CAIM
602]
gi|258587586|gb|EEW12296.1| PilB-related protein [Vibrio mimicus VM573]
gi|342324362|gb|EGU20143.1| PilB-related protein [Vibrio mimicus SX-4]
gi|449079220|gb|EMB50145.1| Peptide methionine sulfoxide reductase MsrB [Vibrio mimicus CAIM
602]
Length = 149
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 19/26 (73%)
Query: 66 IQRKRTKIKCNNCGALLGYIYDDGPP 91
+ R R +++CN C + LG+++ DGPP
Sbjct: 105 LARARVEVRCNTCASHLGHVFPDGPP 130
>gi|221202555|ref|ZP_03575584.1| peptide methionine sulfoxide reductase MsrB [Burkholderia
multivorans CGD2M]
gi|221177592|gb|EEE10010.1| peptide methionine sulfoxide reductase MsrB [Burkholderia
multivorans CGD2M]
Length = 65
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 12/22 (54%), Positives = 17/22 (77%)
Query: 70 RTKIKCNNCGALLGYIYDDGPP 91
RT++ C CG LG+++DDGPP
Sbjct: 24 RTEVHCRRCGGHLGHVFDDGPP 45
>gi|134295944|ref|YP_001119679.1| methionine-R-sulfoxide reductase [Burkholderia vietnamiensis G4]
gi|226711721|sp|A4JEZ1.1|MSRB_BURVG RecName: Full=Peptide methionine sulfoxide reductase MsrB; AltName:
Full=Peptide-methionine (R)-S-oxide reductase
gi|134139101|gb|ABO54844.1| methionine-R-sulfoxide reductase [Burkholderia vietnamiensis G4]
Length = 143
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 19/21 (90%)
Query: 70 RTKIKCNNCGALLGYIYDDGP 90
R +++CN+CGA LG++++DGP
Sbjct: 99 RVEVRCNHCGAHLGHVFEDGP 119
>gi|91783538|ref|YP_558744.1| methionine sulfoxide reductase B [Burkholderia xenovorans LB400]
gi|385209672|ref|ZP_10036540.1| methionine-R-sulfoxide reductase [Burkholderia sp. Ch1-1]
gi|91687492|gb|ABE30692.1| Protein of unknown function DUF25 [Burkholderia xenovorans LB400]
gi|385182010|gb|EIF31286.1| methionine-R-sulfoxide reductase [Burkholderia sp. Ch1-1]
Length = 140
Score = 36.6 bits (83), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 38/87 (43%), Gaps = 19/87 (21%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
IY C CGT L + + F AG F I+ + EK D+
Sbjct: 54 IYDCVCCGTPL-------FESDTKFDAGCGWPSYFKPING-EVIAEKTDRSHGML----- 100
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGP 90
R +++C NCGA LG++++DGP
Sbjct: 101 ------RIEVQCKNCGAHLGHVFEDGP 121
>gi|420254415|ref|ZP_14757420.1| methionine-R-sulfoxide reductase [Burkholderia sp. BT03]
gi|398049133|gb|EJL41572.1| methionine-R-sulfoxide reductase [Burkholderia sp. BT03]
Length = 177
Score = 36.6 bits (83), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 13/57 (22%)
Query: 43 STKFRLEKEDKIRPFFETLDY---------WGIQRKRTKIKCNNCGALLGYIYDDGP 90
STKF + F+ LD+ WG+ R T++ C CG LG+++DDGP
Sbjct: 104 STKF--DSHTGWPSFWAPLDHAVATREDGSWGMVR--TEVHCGRCGGHLGHVFDDGP 156
>gi|257053704|ref|YP_003131537.1| methionine-R-sulfoxide reductase [Halorhabdus utahensis DSM 12940]
gi|256692467|gb|ACV12804.1| methionine-R-sulfoxide reductase [Halorhabdus utahensis DSM 12940]
Length = 137
Score = 36.6 bits (83), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 16/58 (27%)
Query: 68 RKRTKIKCNNCGALLGYIYDDGPPAVDTPGQFHFGPSQVIPRYPRYRLKTKALRISTE 125
R+RT++ C CG LG+++DDGP P RY + + AL T+
Sbjct: 94 RERTEVLCAECGGHLGHVFDDGPE----------------PTGKRYCINSAALDFETD 135
>gi|163745804|ref|ZP_02153163.1| Protein-methionine-S-oxide reductase [Oceanibulbus indolifex
HEL-45]
gi|161380549|gb|EDQ04959.1| Protein-methionine-S-oxide reductase [Oceanibulbus indolifex
HEL-45]
Length = 160
Score = 36.6 bits (83), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 19/22 (86%)
Query: 69 KRTKIKCNNCGALLGYIYDDGP 90
+RT++ C+ CG+ LG+++DDGP
Sbjct: 120 RRTEVHCDRCGSHLGHVFDDGP 141
>gi|424776507|ref|ZP_18203488.1| methionine sulfoxide reductase B [Alcaligenes sp. HPC1271]
gi|422888327|gb|EKU30716.1| methionine sulfoxide reductase B [Alcaligenes sp. HPC1271]
Length = 131
Score = 36.6 bits (83), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 39/88 (44%), Gaps = 19/88 (21%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
IY C CGT L + + F AG F ++ D +R +T
Sbjct: 44 IYRCVGCGTPL-------FASDTKFDAGCGWPSYFTPLNP--------DNVREELDT--- 85
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGPP 91
+RT++ CN C A LG++++DGPP
Sbjct: 86 -SHGMRRTEVLCNVCDAHLGHVFEDGPP 112
>gi|327273067|ref|XP_003221304.1| PREDICTED: methionine-R-sulfoxide reductase B3, mitochondrial-like
[Anolis carolinensis]
Length = 184
Score = 36.6 bits (83), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 39/89 (43%), Gaps = 19/89 (21%)
Query: 2 ASIYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETL 61
+ IY C CGT L + + F + N G SF + + DKI
Sbjct: 74 SGIYKCVVCGTPL-------FKSETKFDS-NSGWPSF-------YDVIASDKIT----FT 114
Query: 62 DYWGIQRKRTKIKCNNCGALLGYIYDDGP 90
D + R + C+ CGA LG+I+DDGP
Sbjct: 115 DDYSFGMHRVETSCSQCGAHLGHIFDDGP 143
>gi|171321059|ref|ZP_02910042.1| methionine-R-sulfoxide reductase [Burkholderia ambifaria MEX-5]
gi|171093673|gb|EDT38823.1| methionine-R-sulfoxide reductase [Burkholderia ambifaria MEX-5]
Length = 143
Score = 36.6 bits (83), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 19/21 (90%)
Query: 70 RTKIKCNNCGALLGYIYDDGP 90
R +++CN+CGA LG++++DGP
Sbjct: 99 RVEVRCNHCGAHLGHVFEDGP 119
>gi|170701224|ref|ZP_02892193.1| methionine-R-sulfoxide reductase [Burkholderia ambifaria IOP40-10]
gi|170133853|gb|EDT02212.1| methionine-R-sulfoxide reductase [Burkholderia ambifaria IOP40-10]
Length = 143
Score = 36.6 bits (83), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 19/21 (90%)
Query: 70 RTKIKCNNCGALLGYIYDDGP 90
R +++CN+CGA LG++++DGP
Sbjct: 99 RVEVRCNHCGAHLGHVFEDGP 119
>gi|335437602|ref|ZP_08560374.1| methionine-R-sulfoxide reductase [Halorhabdus tiamatea SARL4B]
gi|335441495|ref|ZP_08562180.1| methionine-R-sulfoxide reductase [Halorhabdus tiamatea SARL4B]
gi|334886442|gb|EGM24837.1| methionine-R-sulfoxide reductase [Halorhabdus tiamatea SARL4B]
gi|334895290|gb|EGM33464.1| methionine-R-sulfoxide reductase [Halorhabdus tiamatea SARL4B]
Length = 137
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 18/23 (78%)
Query: 68 RKRTKIKCNNCGALLGYIYDDGP 90
R+RT++ C CG LG+++DDGP
Sbjct: 94 RERTEVLCAECGGHLGHVFDDGP 116
>gi|256086707|ref|XP_002579534.1| methionine sulfoxide reductase B2b [Schistosoma mansoni]
gi|238664980|emb|CAZ35773.1| methionine sulfoxide reductase B2b,putative [Schistosoma mansoni]
Length = 186
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 14/87 (16%)
Query: 5 YSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKE-DKIRPFFETLDY 63
Y C CG S L+ ++ F +G+ G SF + + R + + + IR +LD
Sbjct: 93 YLCVCCG-------SKLFDSSSKFDSGS-GWPSFYQVHGSNGRDDSQTNVIRTEDNSLDL 144
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGP 90
R +I C CGA LG++++DGP
Sbjct: 145 M-----RIEISCKQCGAHLGHVFEDGP 166
>gi|126733096|ref|ZP_01748850.1| hypothetical protein SSE37_24963 [Sagittula stellata E-37]
gi|126706445|gb|EBA05528.1| hypothetical protein SSE37_24963 [Sagittula stellata E-37]
Length = 152
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 13/22 (59%), Positives = 17/22 (77%)
Query: 70 RTKIKCNNCGALLGYIYDDGPP 91
RT+ C CG+ LG+I+DDGPP
Sbjct: 113 RTECHCRRCGSHLGHIFDDGPP 134
>gi|115351948|ref|YP_773787.1| methionine-R-sulfoxide reductase [Burkholderia ambifaria AMMD]
gi|122322961|sp|Q0BEH0.1|MSRB_BURCM RecName: Full=Peptide methionine sulfoxide reductase MsrB; AltName:
Full=Peptide-methionine (R)-S-oxide reductase
gi|115281936|gb|ABI87453.1| methionine-R-sulfoxide reductase [Burkholderia ambifaria AMMD]
Length = 143
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 19/21 (90%)
Query: 70 RTKIKCNNCGALLGYIYDDGP 90
R +++CN+CGA LG++++DGP
Sbjct: 99 RVEVRCNHCGAHLGHVFEDGP 119
>gi|336173815|ref|YP_004580953.1| methionine-R-sulfoxide reductase [Lacinutrix sp. 5H-3-7-4]
gi|334728387|gb|AEH02525.1| methionine-R-sulfoxide reductase [Lacinutrix sp. 5H-3-7-4]
Length = 131
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 19/26 (73%)
Query: 70 RTKIKCNNCGALLGYIYDDGPPAVDT 95
RT+I C+NCG LG++++DGP T
Sbjct: 92 RTEIVCSNCGGHLGHVFNDGPTETGT 117
>gi|217978062|ref|YP_002362209.1| methionine-R-sulfoxide reductase [Methylocella silvestris BL2]
gi|217503438|gb|ACK50847.1| methionine-R-sulfoxide reductase [Methylocella silvestris BL2]
Length = 135
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 24/40 (60%)
Query: 52 DKIRPFFETLDYWGIQRKRTKIKCNNCGALLGYIYDDGPP 91
D + ET + +RT++ C+ CG+ LG+++ DGPP
Sbjct: 78 DPLAGAVETSEDRSYGMRRTEVHCSQCGSHLGHVFPDGPP 117
>gi|365897309|ref|ZP_09435319.1| Peptide methionine sulfoxide reductase msrB [Bradyrhizobium sp. STM
3843]
gi|365421983|emb|CCE07861.1| Peptide methionine sulfoxide reductase msrB [Bradyrhizobium sp. STM
3843]
Length = 167
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 11/69 (15%)
Query: 33 KGTLSFAMID----STKFRLEKEDKIRPFFETLDYWGIQRK-------RTKIKCNNCGAL 81
KGT + A D S+ + E FF LD R+ RT++ C CG
Sbjct: 75 KGTFACAGCDLPLFSSDTKFESGTGWPSFFRPLDNAVATREDRTFGMARTEVHCRRCGGH 134
Query: 82 LGYIYDDGP 90
LG+++DDGP
Sbjct: 135 LGHVFDDGP 143
>gi|392404306|ref|YP_006440918.1| Peptide methionine sulfoxide reductase msrB [Turneriella parva DSM
21527]
gi|390612260|gb|AFM13412.1| Peptide methionine sulfoxide reductase msrB [Turneriella parva DSM
21527]
Length = 194
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 18/22 (81%)
Query: 69 KRTKIKCNNCGALLGYIYDDGP 90
+RT+++C CG LG+++DDGP
Sbjct: 129 RRTEVRCARCGGHLGHVFDDGP 150
>gi|254502640|ref|ZP_05114791.1| methionine-R-sulfoxide reductase [Labrenzia alexandrii DFL-11]
gi|222438711|gb|EEE45390.1| methionine-R-sulfoxide reductase [Labrenzia alexandrii DFL-11]
Length = 136
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 13/22 (59%), Positives = 18/22 (81%)
Query: 70 RTKIKCNNCGALLGYIYDDGPP 91
RT+I+CN C A LG+++ DGPP
Sbjct: 96 RTEIRCNKCDAHLGHVFPDGPP 117
>gi|115374180|ref|ZP_01461467.1| peptide methionine sulfoxide reductase MsrB [Stigmatella aurantiaca
DW4/3-1]
gi|115368847|gb|EAU67795.1| peptide methionine sulfoxide reductase MsrB [Stigmatella aurantiaca
DW4/3-1]
Length = 192
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 12/22 (54%), Positives = 17/22 (77%)
Query: 70 RTKIKCNNCGALLGYIYDDGPP 91
RT++ C CG LG+++DDGPP
Sbjct: 153 RTEVVCARCGGHLGHVFDDGPP 174
>gi|344338553|ref|ZP_08769485.1| Peptide methionine sulfoxide reductase msrB [Thiocapsa marina 5811]
gi|343801835|gb|EGV19777.1| Peptide methionine sulfoxide reductase msrB [Thiocapsa marina 5811]
Length = 132
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 12/22 (54%), Positives = 19/22 (86%)
Query: 69 KRTKIKCNNCGALLGYIYDDGP 90
+RT++ CN+CGA LG+++ DGP
Sbjct: 91 RRTEVHCNSCGAHLGHVFPDGP 112
>gi|238026990|ref|YP_002911221.1| methionine-R-sulfoxide reductase [Burkholderia glumae BGR1]
gi|237876184|gb|ACR28517.1| Methionine-R-sulfoxide reductase [Burkholderia glumae BGR1]
Length = 142
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 19/21 (90%)
Query: 70 RTKIKCNNCGALLGYIYDDGP 90
R +++CN+CGA LG++++DGP
Sbjct: 99 RVEVRCNHCGAHLGHVFEDGP 119
>gi|28893017|ref|NP_796066.1| methionine-R-sulfoxide reductase B3, mitochondrial [Mus musculus]
gi|26352279|dbj|BAC39776.1| unnamed protein product [Mus musculus]
gi|66396501|gb|AAH96447.1| Methionine sulfoxide reductase B3 [Mus musculus]
gi|74206496|dbj|BAE23258.1| unnamed protein product [Mus musculus]
gi|148692460|gb|EDL24407.1| methionine sulfoxide reductase B3 [Mus musculus]
Length = 186
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 19/87 (21%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
IY C CGT L + + F +G+ G +F + S++ E D
Sbjct: 76 IYKCVVCGTPL-------FKSETKFDSGS-GWPAFHDVISSEA-----------IEFTDD 116
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGP 90
+ R + C+ CGA LG+I+DDGP
Sbjct: 117 FSYGMHRVETSCSQCGAHLGHIFDDGP 143
>gi|448502257|ref|ZP_21612530.1| methionine-R-sulfoxide reductase [Halorubrum coriense DSM 10284]
gi|445694413|gb|ELZ46542.1| methionine-R-sulfoxide reductase [Halorubrum coriense DSM 10284]
Length = 136
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 19/22 (86%)
Query: 69 KRTKIKCNNCGALLGYIYDDGP 90
+RT+++C NC + LG+++DDGP
Sbjct: 96 RRTEVRCANCDSHLGHVFDDGP 117
>gi|289580687|ref|YP_003479153.1| methionine-R-sulfoxide reductase [Natrialba magadii ATCC 43099]
gi|448284353|ref|ZP_21475613.1| methionine-R-sulfoxide reductase [Natrialba magadii ATCC 43099]
gi|289530240|gb|ADD04591.1| methionine-R-sulfoxide reductase [Natrialba magadii ATCC 43099]
gi|445570688|gb|ELY25247.1| methionine-R-sulfoxide reductase [Natrialba magadii ATCC 43099]
Length = 147
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 20/86 (23%)
Query: 5 YSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDYW 64
Y C CG L + Y + +P SF +D +D+I +T
Sbjct: 59 YECAGCGAEL-FDGDTKYDSGCGWP-------SFYDVD--------DDRIETRLDT--SH 100
Query: 65 GIQRKRTKIKCNNCGALLGYIYDDGP 90
G+QR T++ C NCG LG++++DGP
Sbjct: 101 GMQR--TEVLCANCGGHLGHVFEDGP 124
>gi|85710216|ref|ZP_01041281.1| methionine sulfoxide reductase B [Erythrobacter sp. NAP1]
gi|85688926|gb|EAQ28930.1| methionine sulfoxide reductase B [Erythrobacter sp. NAP1]
Length = 134
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 12/22 (54%), Positives = 18/22 (81%)
Query: 70 RTKIKCNNCGALLGYIYDDGPP 91
RT++ C NCG+ LG+++ DGPP
Sbjct: 93 RTEVTCGNCGSHLGHVFPDGPP 114
>gi|345870510|ref|ZP_08822462.1| Peptide methionine sulfoxide reductase msrB [Thiorhodococcus
drewsii AZ1]
gi|343921713|gb|EGV32426.1| Peptide methionine sulfoxide reductase msrB [Thiorhodococcus
drewsii AZ1]
Length = 135
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 12/22 (54%), Positives = 19/22 (86%)
Query: 69 KRTKIKCNNCGALLGYIYDDGP 90
+RT+++C NCGA LG+++ DGP
Sbjct: 91 RRTEVQCANCGAHLGHVFPDGP 112
>gi|89890274|ref|ZP_01201784.1| methionine sulfoxide reductase, msrB [Flavobacteria bacterium
BBFL7]
gi|89517189|gb|EAS19846.1| methionine sulfoxide reductase, msrB [Flavobacteria bacterium
BBFL7]
Length = 127
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 19/24 (79%)
Query: 70 RTKIKCNNCGALLGYIYDDGPPAV 93
RT+I C NCG+ LG++++DGP A
Sbjct: 88 RTEIMCANCGSHLGHVFNDGPTAT 111
>gi|375149259|ref|YP_005011700.1| Peptide methionine sulfoxide reductase msrB [Niastella koreensis
GR20-10]
gi|361063305|gb|AEW02297.1| Peptide methionine sulfoxide reductase msrB [Niastella koreensis
GR20-10]
Length = 195
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 12/22 (54%), Positives = 18/22 (81%)
Query: 70 RTKIKCNNCGALLGYIYDDGPP 91
RT+++C C A LG+++DDGPP
Sbjct: 137 RTEVECGRCKAHLGHVFDDGPP 158
>gi|295133721|ref|YP_003584397.1| peptide methionine sulfoxide reductase [Zunongwangia profunda
SM-A87]
gi|294981736|gb|ADF52201.1| peptide methionine sulfoxide reductase [Zunongwangia profunda
SM-A87]
Length = 131
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 13/21 (61%), Positives = 18/21 (85%)
Query: 70 RTKIKCNNCGALLGYIYDDGP 90
RT+I C NCG+ LG+++DDGP
Sbjct: 92 RTEILCANCGSHLGHVFDDGP 112
>gi|194336206|ref|YP_002018000.1| methionine-R-sulfoxide reductase [Pelodictyon phaeoclathratiforme
BU-1]
gi|194308683|gb|ACF43383.1| methionine-R-sulfoxide reductase [Pelodictyon phaeoclathratiforme
BU-1]
Length = 506
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 12/45 (26%)
Query: 57 FFETL----------DYWGIQRKRTKIKCNNCGALLGYIYDDGPP 91
FFETL +G++R T++ C C A LG+++DDGPP
Sbjct: 438 FFETLRPNSVLYRKDSSFGMER--TEVVCGRCKAHLGHVFDDGPP 480
>gi|448356705|ref|ZP_21545429.1| methionine-R-sulfoxide reductase [Natrialba chahannaoensis JCM
10990]
gi|445652448|gb|ELZ05339.1| methionine-R-sulfoxide reductase [Natrialba chahannaoensis JCM
10990]
Length = 147
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 20/86 (23%)
Query: 5 YSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDYW 64
Y C CG L + Y + +P SF +D +D+I +T
Sbjct: 59 YECAGCGAEL-FDGDTKYDSGCGWP-------SFYDVD--------DDRIETRLDT--SH 100
Query: 65 GIQRKRTKIKCNNCGALLGYIYDDGP 90
G+QR T++ C NCG LG++++DGP
Sbjct: 101 GMQR--TEVLCANCGGHLGHVFEDGP 124
>gi|435847255|ref|YP_007309505.1| methionine-R-sulfoxide reductase [Natronococcus occultus SP4]
gi|433673523|gb|AGB37715.1| methionine-R-sulfoxide reductase [Natronococcus occultus SP4]
Length = 128
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 12/22 (54%), Positives = 18/22 (81%)
Query: 69 KRTKIKCNNCGALLGYIYDDGP 90
+RT++ C NCG LG+++DDGP
Sbjct: 88 RRTEVLCANCGGHLGHVFDDGP 109
>gi|402486510|ref|ZP_10833341.1| methionine sulfoxide reductase B [Rhizobium sp. CCGE 510]
gi|401814633|gb|EJT06964.1| methionine sulfoxide reductase B [Rhizobium sp. CCGE 510]
Length = 137
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 13/22 (59%), Positives = 18/22 (81%)
Query: 70 RTKIKCNNCGALLGYIYDDGPP 91
RT+I+C NC A LG+++ DGPP
Sbjct: 97 RTEIRCGNCEAHLGHVFPDGPP 118
>gi|148555808|ref|YP_001263390.1| methionine-R-sulfoxide reductase [Sphingomonas wittichii RW1]
gi|148500998|gb|ABQ69252.1| methionine-R-sulfoxide reductase [Sphingomonas wittichii RW1]
Length = 161
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 66 IQRKRTKIKCNNCGALLGYIYDDGPP 91
I R+ + C+ CG LG+++DDGPP
Sbjct: 117 IGVPRSAVSCHRCGGHLGHVFDDGPP 142
>gi|312375358|gb|EFR22747.1| hypothetical protein AND_14266 [Anopheles darlingi]
Length = 237
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 11/24 (45%), Positives = 19/24 (79%)
Query: 68 RKRTKIKCNNCGALLGYIYDDGPP 91
R RT+++C C A +G++++DGPP
Sbjct: 187 RVRTEVRCAKCAAHMGHVFEDGPP 210
>gi|409406042|ref|ZP_11254504.1| peptide methionine sulfoxide reductase [Herbaspirillum sp. GW103]
gi|386434591|gb|EIJ47416.1| peptide methionine sulfoxide reductase [Herbaspirillum sp. GW103]
Length = 131
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 38/90 (42%), Gaps = 19/90 (21%)
Query: 2 ASIYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETL 61
A IY+C C T L + + F +G F ID R EK D+
Sbjct: 43 AGIYTCVCCDTPL-------FTSDAKFDSGCGWPSYFEPIDPANVR-EKVDRSYGMI--- 91
Query: 62 DYWGIQRKRTKIKCNNCGALLGYIYDDGPP 91
RT+I CN C A LG+++ DGPP
Sbjct: 92 --------RTEIICNVCDAHLGHVFPDGPP 113
>gi|357383143|ref|YP_004897867.1| peptide methionine sulfoxide reductase [Pelagibacterium
halotolerans B2]
gi|351591780|gb|AEQ50117.1| peptide methionine sulfoxide reductase MsrB [Pelagibacterium
halotolerans B2]
Length = 160
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 13/21 (61%), Positives = 17/21 (80%)
Query: 70 RTKIKCNNCGALLGYIYDDGP 90
RT+ C+NCG LG+I+DDGP
Sbjct: 121 RTECHCSNCGGHLGHIFDDGP 141
>gi|256086709|ref|XP_002579535.1| methionine sulfoxide reductase B2b [Schistosoma mansoni]
gi|50442729|gb|AAT77264.1| methionine sulfoxide reductase B2b [Schistosoma mansoni]
gi|238664981|emb|CAZ35774.1| methionine sulfoxide reductase B2b,putative [Schistosoma mansoni]
Length = 137
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 14/87 (16%)
Query: 5 YSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKE-DKIRPFFETLDY 63
Y C CG S L+ ++ F +G+ G SF + + R + + + IR +LD
Sbjct: 44 YLCVCCG-------SKLFDSSSKFDSGS-GWPSFYQVHGSNGRDDSQTNVIRTEDNSLDL 95
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGP 90
R +I C CGA LG++++DGP
Sbjct: 96 M-----RIEISCKQCGAHLGHVFEDGP 117
>gi|307729672|ref|YP_003906896.1| methionine-R-sulfoxide reductase [Burkholderia sp. CCGE1003]
gi|307584207|gb|ADN57605.1| methionine-R-sulfoxide reductase [Burkholderia sp. CCGE1003]
Length = 140
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 38/87 (43%), Gaps = 19/87 (21%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
+Y C CGT L + + F AG F I+ + EK D+
Sbjct: 54 VYDCVCCGTPL-------FESDTKFDAGCGWPSYFKPING-EVIAEKTDRSHGML----- 100
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGP 90
R +++C NCGA LG++++DGP
Sbjct: 101 ------RIEVQCKNCGAHLGHVFEDGP 121
>gi|378825279|ref|YP_005188011.1| peptide methionine sulfoxide reductase [Sinorhizobium fredii HH103]
gi|365178331|emb|CCE95186.1| peptide methionine sulfoxide reductase [Sinorhizobium fredii HH103]
Length = 135
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 13/22 (59%), Positives = 18/22 (81%)
Query: 70 RTKIKCNNCGALLGYIYDDGPP 91
RT+I+C NC A LG+++ DGPP
Sbjct: 96 RTEIRCANCDAHLGHVFPDGPP 117
>gi|327478524|sp|Q8BU85.2|MSRB3_MOUSE RecName: Full=Methionine-R-sulfoxide reductase B3, mitochondrial;
Short=MsrB3; Flags: Precursor
Length = 253
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 19/87 (21%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
IY C CGT L + + F +G+ G +F + S++ E D
Sbjct: 143 IYKCVVCGTPL-------FKSETKFDSGS-GWPAFHDVISSEA-----------IEFTDD 183
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGP 90
+ R + C+ CGA LG+I+DDGP
Sbjct: 184 FSYGMHRVETSCSQCGAHLGHIFDDGP 210
>gi|254252168|ref|ZP_04945486.1| hypothetical protein BDAG_01384 [Burkholderia dolosa AUO158]
gi|124894777|gb|EAY68657.1| hypothetical protein BDAG_01384 [Burkholderia dolosa AUO158]
Length = 143
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 19/21 (90%)
Query: 70 RTKIKCNNCGALLGYIYDDGP 90
R +++CN+CGA LG++++DGP
Sbjct: 99 RVEVRCNHCGAHLGHVFEDGP 119
>gi|227821325|ref|YP_002825295.1| peptide methionine sulfoxide reductase MsrB 3 [Sinorhizobium fredii
NGR234]
gi|227340324|gb|ACP24542.1| peptide methionine sulfoxide reductase MsrB 3 [Sinorhizobium fredii
NGR234]
Length = 135
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 13/22 (59%), Positives = 18/22 (81%)
Query: 70 RTKIKCNNCGALLGYIYDDGPP 91
RT+I+C NC A LG+++ DGPP
Sbjct: 96 RTEIRCANCDAHLGHVFPDGPP 117
>gi|310828783|ref|YP_003961140.1| coat protein [Eubacterium limosum KIST612]
gi|308740517|gb|ADO38177.1| coat protein [Eubacterium limosum KIST612]
Length = 342
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 43/106 (40%), Gaps = 7/106 (6%)
Query: 16 LNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDYWGIQRKRTKIKC 75
+ +HL NK A++ S + + ++ F++ D GIQR C
Sbjct: 163 ITATHLNDLATQACGDNKNIFQLAIMHSDVAKTLENLQLLEFWKQTDANGIQRPVNLASC 222
Query: 76 NNCGALLGYIYDDGPPAVDTPGQFHFGPSQVIPRYPRYRLKTKALR 121
N L+ DDG P G+ G ++ + +Y Y L T LR
Sbjct: 223 NGYTVLI----DDGVPVEAVGGE---GANKALKKYTTYLLGTGVLR 261
>gi|323526032|ref|YP_004228185.1| methionine-R-sulfoxide reductase [Burkholderia sp. CCGE1001]
gi|407713394|ref|YP_006833959.1| peptide-methionine (R)-S-oxide reductase [Burkholderia
phenoliruptrix BR3459a]
gi|323383034|gb|ADX55125.1| methionine-R-sulfoxide reductase [Burkholderia sp. CCGE1001]
gi|407235578|gb|AFT85777.1| peptide-methionine (R)-S-oxide reductase [Burkholderia
phenoliruptrix BR3459a]
Length = 140
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 38/87 (43%), Gaps = 19/87 (21%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
+Y C CGT L + + F AG F I+ + EK D+
Sbjct: 54 VYDCVCCGTPL-------FESDTKFDAGCGWPSYFKPING-EVIAEKTDRSHGML----- 100
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGP 90
R +++C NCGA LG++++DGP
Sbjct: 101 ------RIEVQCKNCGAHLGHVFEDGP 121
>gi|407776857|ref|ZP_11124129.1| methionine-R-sulfoxide reductase [Nitratireductor pacificus pht-3B]
gi|407301553|gb|EKF20673.1| methionine-R-sulfoxide reductase [Nitratireductor pacificus pht-3B]
Length = 169
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 13/22 (59%), Positives = 16/22 (72%)
Query: 70 RTKIKCNNCGALLGYIYDDGPP 91
RT+ C CG LG+I+DDGPP
Sbjct: 125 RTECHCRRCGGHLGHIFDDGPP 146
>gi|17546466|ref|NP_519868.1| methionine sulfoxide reductase B [Ralstonia solanacearum GMI1000]
gi|20455089|sp|Q8XYL1.1|MSRB_RALSO RecName: Full=Peptide methionine sulfoxide reductase MsrB; AltName:
Full=Peptide-methionine (R)-S-oxide reductase
gi|17428764|emb|CAD15449.1| probable peptide methionine sulfoxide reductase related protein
[Ralstonia solanacearum GMI1000]
Length = 128
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 38/87 (43%), Gaps = 19/87 (21%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
IY C CGT L + ++ F AG FA I+ + EK D
Sbjct: 43 IYHCVCCGTPL-------FESSTKFDAGCGWPSYFAPING-EVIAEKTDHSHGMV----- 89
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGP 90
R +++C CGA LG++++DGP
Sbjct: 90 ------RIEVQCKQCGAHLGHVFEDGP 110
>gi|325954059|ref|YP_004237719.1| methionine-R-sulfoxide reductase [Weeksella virosa DSM 16922]
gi|323436677|gb|ADX67141.1| methionine-R-sulfoxide reductase [Weeksella virosa DSM 16922]
Length = 137
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 13/21 (61%), Positives = 17/21 (80%)
Query: 70 RTKIKCNNCGALLGYIYDDGP 90
RT+I C NCG LG+++DDGP
Sbjct: 97 RTEILCANCGGHLGHVFDDGP 117
>gi|229595132|ref|XP_001019714.3| methionine-R-sulfoxide reductase family protein [Tetrahymena
thermophila]
gi|225566381|gb|EAR99469.3| methionine-R-sulfoxide reductase family protein [Tetrahymena
thermophila SB210]
Length = 134
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 12/21 (57%), Positives = 18/21 (85%)
Query: 70 RTKIKCNNCGALLGYIYDDGP 90
RT++ C NCGA LG++++DGP
Sbjct: 94 RTEVVCKNCGAHLGHVFNDGP 114
>gi|194212345|ref|XP_001490760.2| PREDICTED: methionine-R-sulfoxide reductase B3, mitochondrial-like
[Equus caballus]
Length = 183
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 42/87 (48%), Gaps = 19/87 (21%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
IY C CGT L + + F +G+ G SF + S+ D I F + Y
Sbjct: 76 IYKCVVCGTPL-------FKSETKFDSGS-GWPSFHDVISS-------DAI-TFTDDFSY 119
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGP 90
G+ R T C+ CGA LG+I+DDGP
Sbjct: 120 -GMHRVETS--CSQCGAHLGHIFDDGP 143
>gi|414076357|ref|YP_006995675.1| methionine-R-sulfoxide reductase [Anabaena sp. 90]
gi|413969773|gb|AFW93862.1| methionine-R-sulfoxide reductase [Anabaena sp. 90]
Length = 164
Score = 36.2 bits (82), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 18/21 (85%)
Query: 70 RTKIKCNNCGALLGYIYDDGP 90
RT++ C+NCG LG++++DGP
Sbjct: 125 RTEVHCSNCGGHLGHVFNDGP 145
>gi|221215073|ref|ZP_03588040.1| methionine-R-sulfoxide reductase [Burkholderia multivorans CGD1]
gi|221165009|gb|EED97488.1| methionine-R-sulfoxide reductase [Burkholderia multivorans CGD1]
Length = 143
Score = 36.2 bits (82), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 19/21 (90%)
Query: 70 RTKIKCNNCGALLGYIYDDGP 90
R +++CN+CGA LG++++DGP
Sbjct: 99 RVEVRCNHCGAHLGHVFEDGP 119
>gi|86142683|ref|ZP_01061122.1| SelR-like methionine sulfoxide reductase [Leeuwenhoekiella
blandensis MED217]
gi|85830715|gb|EAQ49173.1| SelR-like methionine sulfoxide reductase [Leeuwenhoekiella
blandensis MED217]
Length = 132
Score = 36.2 bits (82), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 13/21 (61%), Positives = 18/21 (85%)
Query: 70 RTKIKCNNCGALLGYIYDDGP 90
RT+I C NCG+ LG+++DDGP
Sbjct: 93 RTEILCANCGSHLGHVFDDGP 113
>gi|161524538|ref|YP_001579550.1| methionine-R-sulfoxide reductase [Burkholderia multivorans ATCC
17616]
gi|189350706|ref|YP_001946334.1| peptide-methionine (R)-S-oxide reductase [Burkholderia multivorans
ATCC 17616]
gi|421477661|ref|ZP_15925471.1| methionine-R-sulfoxide reductase [Burkholderia multivorans CF2]
gi|226711718|sp|A9AJS6.1|MSRB_BURM1 RecName: Full=Peptide methionine sulfoxide reductase MsrB; AltName:
Full=Peptide-methionine (R)-S-oxide reductase
gi|160341967|gb|ABX15053.1| methionine-R-sulfoxide reductase [Burkholderia multivorans ATCC
17616]
gi|189334728|dbj|BAG43798.1| peptide-methionine (R)-S-oxide reductase [Burkholderia multivorans
ATCC 17616]
gi|400226122|gb|EJO56219.1| methionine-R-sulfoxide reductase [Burkholderia multivorans CF2]
Length = 143
Score = 36.2 bits (82), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 19/21 (90%)
Query: 70 RTKIKCNNCGALLGYIYDDGP 90
R +++CN+CGA LG++++DGP
Sbjct: 99 RVEVRCNHCGAHLGHVFEDGP 119
>gi|221198199|ref|ZP_03571245.1| methionine-R-sulfoxide reductase [Burkholderia multivorans CGD2M]
gi|221208308|ref|ZP_03581311.1| methionine-R-sulfoxide reductase [Burkholderia multivorans CGD2]
gi|421468835|ref|ZP_15917346.1| methionine-R-sulfoxide reductase [Burkholderia multivorans ATCC
BAA-247]
gi|221171721|gb|EEE04165.1| methionine-R-sulfoxide reductase [Burkholderia multivorans CGD2]
gi|221182131|gb|EEE14532.1| methionine-R-sulfoxide reductase [Burkholderia multivorans CGD2M]
gi|400231084|gb|EJO60805.1| methionine-R-sulfoxide reductase [Burkholderia multivorans ATCC
BAA-247]
Length = 143
Score = 36.2 bits (82), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 19/21 (90%)
Query: 70 RTKIKCNNCGALLGYIYDDGP 90
R +++CN+CGA LG++++DGP
Sbjct: 99 RVEVRCNHCGAHLGHVFEDGP 119
>gi|359797609|ref|ZP_09300192.1| methionine-R-sulfoxide reductase [Achromobacter arsenitoxydans SY8]
gi|359364412|gb|EHK66126.1| methionine-R-sulfoxide reductase [Achromobacter arsenitoxydans SY8]
Length = 166
Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 12/21 (57%), Positives = 16/21 (76%)
Query: 70 RTKIKCNNCGALLGYIYDDGP 90
RT + C NCG LG+++DDGP
Sbjct: 126 RTAVHCANCGGHLGHVFDDGP 146
>gi|24645799|ref|NP_731522.1| SelR, isoform C [Drosophila melanogaster]
gi|23170947|gb|AAN13490.1| SelR, isoform C [Drosophila melanogaster]
Length = 197
Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 41/87 (47%), Gaps = 18/87 (20%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
+Y C C +L ++ Y + +PA N ++D K L ++ I
Sbjct: 90 VYQCIVCHQDL-FSSETKYDSGCGWPAFND------VLDKGKVTLHRDASI--------- 133
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGP 90
+R RT+++C C A +G++++DGP
Sbjct: 134 --PERIRTEVRCARCNAHMGHVFEDGP 158
>gi|448348842|ref|ZP_21537690.1| methionine-R-sulfoxide reductase [Natrialba taiwanensis DSM 12281]
gi|445642503|gb|ELY95571.1| methionine-R-sulfoxide reductase [Natrialba taiwanensis DSM 12281]
Length = 150
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 20/86 (23%)
Query: 5 YSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDYW 64
Y C CG + L+ F +G G SF +D + +D
Sbjct: 60 YECAGCG-------AALFDGDTKFDSGC-GWPSFYDVDDDRIETRSDDSH---------- 101
Query: 65 GIQRKRTKIKCNNCGALLGYIYDDGP 90
G+ +RT++ C NCG LG++++DGP
Sbjct: 102 GM--RRTEVLCANCGGHLGHVFEDGP 125
>gi|254441158|ref|ZP_05054651.1| methionine-R-sulfoxide reductase [Octadecabacter antarcticus 307]
gi|198251236|gb|EDY75551.1| methionine-R-sulfoxide reductase [Octadecabacter antarcticus 307]
Length = 155
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 20/89 (22%)
Query: 2 ASIYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETL 61
A IY C+ C L ++ H + + +P SF + + + +D FF +
Sbjct: 68 AGIYHCRGCDQAL-YSSEHKFDSRTGWP-------SFFDVLPNAIQTKADDT---FFSS- 115
Query: 62 DYWGIQRKRTKIKCNNCGALLGYIYDDGP 90
RT+ C+ CG+ LG+I+DDGP
Sbjct: 116 --------RTECHCDRCGSHLGHIFDDGP 136
>gi|162149388|ref|YP_001603849.1| peptide methionine sulfoxide reductase msrB [Gluconacetobacter
diazotrophicus PAl 5]
gi|161787965|emb|CAP57565.1| putative peptide methionine sulfoxide reductase msrB
[Gluconacetobacter diazotrophicus PAl 5]
Length = 154
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 12/22 (54%), Positives = 17/22 (77%)
Query: 70 RTKIKCNNCGALLGYIYDDGPP 91
RT++ C CG LG+++DDGPP
Sbjct: 115 RTEVLCATCGGHLGHVFDDGPP 136
>gi|407792948|ref|ZP_11139984.1| methionine sulfoxide reductase B [Idiomarina xiamenensis 10-D-4]
gi|407217206|gb|EKE87042.1| methionine sulfoxide reductase B [Idiomarina xiamenensis 10-D-4]
Length = 131
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 18/24 (75%)
Query: 69 KRTKIKCNNCGALLGYIYDDGPPA 92
+RT+I C CG LG+++DDGP A
Sbjct: 90 QRTEILCRRCGGHLGHVFDDGPTA 113
>gi|209517042|ref|ZP_03265890.1| methionine-R-sulfoxide reductase [Burkholderia sp. H160]
gi|209502573|gb|EEA02581.1| methionine-R-sulfoxide reductase [Burkholderia sp. H160]
Length = 140
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 38/87 (43%), Gaps = 19/87 (21%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
+Y C CGT L + + F AG F I+ + EK D+
Sbjct: 54 VYDCVCCGTPL-------FESDTKFDAGCGWPSYFRPING-EVIAEKTDRSHGML----- 100
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGP 90
R +++C NCGA LG++++DGP
Sbjct: 101 ------RIEVQCKNCGAHLGHVFEDGP 121
>gi|421728517|ref|ZP_16167670.1| methionine sulfoxide reductase B [Klebsiella oxytoca M5al]
gi|410370681|gb|EKP25409.1| methionine sulfoxide reductase B [Klebsiella oxytoca M5al]
Length = 137
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 4/40 (10%)
Query: 51 EDKIRPFFETLDYWGIQRKRTKIKCNNCGALLGYIYDDGP 90
+D IR LD + +RT+I+C NC A LG+++ DGP
Sbjct: 75 DDAIR----YLDDYSHGMQRTEIRCGNCDAHLGHVFPDGP 110
>gi|325923663|ref|ZP_08185288.1| methionine-R-sulfoxide reductase [Xanthomonas gardneri ATCC 19865]
gi|325545862|gb|EGD17091.1| methionine-R-sulfoxide reductase [Xanthomonas gardneri ATCC 19865]
Length = 154
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 19/91 (20%)
Query: 1 MASIYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFET 60
+ +Y+C+ CG L + ++ F +G FA D+ R +IR
Sbjct: 47 LEGVYTCRLCGLPL-------FRSSAKFESGTGWPSFFAPYDAAHVR-----EIR----D 90
Query: 61 LDYWGIQRKRTKIKCNNCGALLGYIYDDGPP 91
+ Y I RT+I C C + LG+++ DGPP
Sbjct: 91 ISYGMI---RTEIVCARCDSHLGHVFPDGPP 118
>gi|225709610|gb|ACO10651.1| Peptide methionine sulfoxide reductase msrB [Caligus rogercresseyi]
Length = 166
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 12/22 (54%), Positives = 18/22 (81%)
Query: 69 KRTKIKCNNCGALLGYIYDDGP 90
+RT++ C NCGA LG+++ DGP
Sbjct: 125 RRTEVLCKNCGAHLGHVFTDGP 146
>gi|119509784|ref|ZP_01628928.1| methionine sulfoxide reductase B [Nodularia spumigena CCY9414]
gi|119465519|gb|EAW46412.1| methionine sulfoxide reductase B [Nodularia spumigena CCY9414]
Length = 165
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 18/21 (85%)
Query: 70 RTKIKCNNCGALLGYIYDDGP 90
RT++ C+NCG LG++++DGP
Sbjct: 126 RTEVHCSNCGGHLGHVFNDGP 146
>gi|428221422|ref|YP_007105592.1| methionine-R-sulfoxide reductase [Synechococcus sp. PCC 7502]
gi|427994762|gb|AFY73457.1| methionine-R-sulfoxide reductase [Synechococcus sp. PCC 7502]
Length = 144
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 37/86 (43%), Gaps = 20/86 (23%)
Query: 5 YSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDYW 64
Y CK CGT L + + N GT + D + +E R FF T
Sbjct: 56 YVCKGCGTPLFTSDTKF----------NSGTGWPSFYDPLENSVETTTD-RSFFMT---- 100
Query: 65 GIQRKRTKIKCNNCGALLGYIYDDGP 90
R ++ C NCG LG++++DGP
Sbjct: 101 -----RVEVHCRNCGGHLGHVFNDGP 121
>gi|377820676|ref|YP_004977047.1| methionine sulfoxide reductase B [Burkholderia sp. YI23]
gi|357935511|gb|AET89070.1| methionine sulfoxide reductase B [Burkholderia sp. YI23]
Length = 138
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 37/87 (42%), Gaps = 19/87 (21%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
IY C CGT L + + F AG F I+ + EK D+
Sbjct: 52 IYDCVCCGTPL-------FESDTKFDAGCGWPSYFKPINGEVIQ-EKTDRTHGML----- 98
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGP 90
R ++ C NCGA LG++++DGP
Sbjct: 99 ------RIEVLCKNCGAHLGHVFEDGP 119
>gi|449270766|gb|EMC81418.1| Methionine-R-sulfoxide reductase B3, mitochondrial [Columba livia]
Length = 184
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 38/88 (43%), Gaps = 21/88 (23%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETL-D 62
IY C CGT L + + F + N G SF D I P T D
Sbjct: 76 IYKCVVCGTPL-------FKSETKFDS-NSGWPSFY------------DVISPDAITFND 115
Query: 63 YWGIQRKRTKIKCNNCGALLGYIYDDGP 90
+ R +I C+ CGA LG+I+DDGP
Sbjct: 116 DFSYGMHRIEISCSQCGAHLGHIFDDGP 143
>gi|448406906|ref|ZP_21573338.1| methionine-R-sulfoxide reductase [Halosimplex carlsbadense 2-9-1]
gi|445676712|gb|ELZ29229.1| methionine-R-sulfoxide reductase [Halosimplex carlsbadense 2-9-1]
Length = 135
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 23/88 (26%)
Query: 5 YSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMID--STKFRLEKEDKIRPFFETLD 62
++C CGT L +T Y A +P+ F +I+ + + +L+ +R
Sbjct: 49 FTCAGCGTEL-FSTDQQYDAGHGWPS------FFDVIEDGNVETKLDTSHGMR------- 94
Query: 63 YWGIQRKRTKIKCNNCGALLGYIYDDGP 90
RT++ C CG LG+++DDGP
Sbjct: 95 -------RTEVVCGTCGGHLGHVFDDGP 115
>gi|344266321|ref|XP_003405229.1| PREDICTED: methionine-R-sulfoxide reductase B3, mitochondrial-like
[Loxodonta africana]
Length = 184
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 38/88 (43%), Gaps = 21/88 (23%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETL-D 62
IY C CGT L + + F +G+ G SF D I P T D
Sbjct: 76 IYKCVVCGTPL-------FKSETKFDSGS-GWPSF------------HDVISPDAITFTD 115
Query: 63 YWGIQRKRTKIKCNNCGALLGYIYDDGP 90
+ R + C+ CGA LG+I+DDGP
Sbjct: 116 DFSYGMHRVETSCSQCGAHLGHIFDDGP 143
>gi|408794056|ref|ZP_11205661.1| methionine-R-sulfoxide reductase [Leptospira meyeri serovar Hardjo
str. Went 5]
gi|408461291|gb|EKJ85021.1| methionine-R-sulfoxide reductase [Leptospira meyeri serovar Hardjo
str. Went 5]
Length = 126
Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 13/21 (61%), Positives = 17/21 (80%)
Query: 70 RTKIKCNNCGALLGYIYDDGP 90
RT+I C NCGA LG+++ DGP
Sbjct: 87 RTEIHCQNCGAHLGHVFPDGP 107
>gi|398830432|ref|ZP_10588624.1| methionine-R-sulfoxide reductase [Phyllobacterium sp. YR531]
gi|398214803|gb|EJN01373.1| methionine-R-sulfoxide reductase [Phyllobacterium sp. YR531]
Length = 134
Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 13/22 (59%), Positives = 19/22 (86%)
Query: 70 RTKIKCNNCGALLGYIYDDGPP 91
RT+IKC++C A LG+++ DGPP
Sbjct: 95 RTEIKCSDCDAHLGHVFPDGPP 116
>gi|317967966|ref|ZP_07969356.1| methionine sulfoxide reductase B [Synechococcus sp. CB0205]
Length = 133
Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 13/21 (61%), Positives = 18/21 (85%)
Query: 70 RTKIKCNNCGALLGYIYDDGP 90
RT+IKC NC A LG++++DGP
Sbjct: 92 RTEIKCANCDAHLGHVFNDGP 112
>gi|440679798|ref|YP_007154593.1| methionine-R-sulfoxide reductase [Anabaena cylindrica PCC 7122]
gi|428676917|gb|AFZ55683.1| methionine-R-sulfoxide reductase [Anabaena cylindrica PCC 7122]
Length = 164
Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 18/21 (85%)
Query: 70 RTKIKCNNCGALLGYIYDDGP 90
RT++ C+NCG LG++++DGP
Sbjct: 125 RTEVHCSNCGGHLGHVFNDGP 145
>gi|298674699|ref|YP_003726449.1| methionine-R-sulfoxide reductase [Methanohalobium evestigatum
Z-7303]
gi|298287687|gb|ADI73653.1| methionine-R-sulfoxide reductase [Methanohalobium evestigatum
Z-7303]
Length = 130
Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 39/87 (44%), Gaps = 19/87 (21%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
IY C CG L+ + + +G +A I ED+I ET
Sbjct: 44 IYRCAGCG-------QELFSSETKYDSGTGWPSFWAPIS--------EDRI----ETKTD 84
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGP 90
+ +RT++ C+ CG LG++++DGP
Sbjct: 85 YSFSMERTEVMCSRCGGHLGHVFNDGP 111
>gi|448361637|ref|ZP_21550251.1| methionine-R-sulfoxide reductase [Natrialba asiatica DSM 12278]
gi|445649856|gb|ELZ02788.1| methionine-R-sulfoxide reductase [Natrialba asiatica DSM 12278]
Length = 150
Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 20/86 (23%)
Query: 5 YSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDYW 64
Y C CG + L+ F +G G SF +D + +D
Sbjct: 60 YECAGCG-------AALFDGDTKFDSGC-GWPSFYDVDDDRIETRSDDSH---------- 101
Query: 65 GIQRKRTKIKCNNCGALLGYIYDDGP 90
G+ +RT++ C NCG LG++++DGP
Sbjct: 102 GM--RRTEVLCANCGGHLGHVFEDGP 125
>gi|313125447|ref|YP_004035711.1| methionine-r-sulfoxide reductase [Halogeometricum borinquense DSM
11551]
gi|448286956|ref|ZP_21478172.1| methionine-r-sulfoxide reductase [Halogeometricum borinquense DSM
11551]
gi|312291812|gb|ADQ66272.1| methionine-R-sulfoxide reductase [Halogeometricum borinquense DSM
11551]
gi|445572702|gb|ELY27232.1| methionine-r-sulfoxide reductase [Halogeometricum borinquense DSM
11551]
Length = 135
Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 35/86 (40%), Gaps = 20/86 (23%)
Query: 5 YSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDYW 64
Y C CG + L+ A F +G FA D +E E R
Sbjct: 50 YLCTGCG-------AELFDAETKFDSGCGWPSFFAAHDDA---IETETDTRHGM------ 93
Query: 65 GIQRKRTKIKCNNCGALLGYIYDDGP 90
+R ++ C NCG LG+++DDGP
Sbjct: 94 ----RRIEVLCENCGGHLGHVFDDGP 115
>gi|295676532|ref|YP_003605056.1| methionine-R-sulfoxide reductase [Burkholderia sp. CCGE1002]
gi|295436375|gb|ADG15545.1| methionine-R-sulfoxide reductase [Burkholderia sp. CCGE1002]
Length = 140
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 37/87 (42%), Gaps = 19/87 (21%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
+Y C CGT L + + F AG F I+ EK D+
Sbjct: 54 VYDCVCCGTPL-------FESDTKFDAGCGWPSYFRPINGEVI-AEKTDRSHGML----- 100
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGP 90
R +++C NCGA LG++++DGP
Sbjct: 101 ------RIEVQCKNCGAHLGHVFEDGP 121
>gi|224093983|ref|XP_002188634.1| PREDICTED: methionine-R-sulfoxide reductase B3, mitochondrial
[Taeniopygia guttata]
Length = 184
Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 13/21 (61%), Positives = 17/21 (80%)
Query: 70 RTKIKCNNCGALLGYIYDDGP 90
R +I C+ CGA LG+I+DDGP
Sbjct: 123 RIEISCSQCGAHLGHIFDDGP 143
>gi|171058524|ref|YP_001790873.1| methionine-R-sulfoxide reductase [Leptothrix cholodnii SP-6]
gi|170775969|gb|ACB34108.1| methionine-R-sulfoxide reductase [Leptothrix cholodnii SP-6]
Length = 141
Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 17/21 (80%)
Query: 70 RTKIKCNNCGALLGYIYDDGP 90
R +++C CGA LG+++DDGP
Sbjct: 101 RVEVRCQQCGAHLGHVFDDGP 121
>gi|322368868|ref|ZP_08043435.1| methionine-R-sulfoxide reductase [Haladaptatus paucihalophilus
DX253]
gi|320551599|gb|EFW93246.1| methionine-R-sulfoxide reductase [Haladaptatus paucihalophilus
DX253]
Length = 133
Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 12/21 (57%), Positives = 17/21 (80%)
Query: 70 RTKIKCNNCGALLGYIYDDGP 90
RT++ C NCG LG+++DDGP
Sbjct: 94 RTEVVCANCGGHLGHVFDDGP 114
>gi|301769361|ref|XP_002920099.1| PREDICTED: hypothetical protein LOC100464416 [Ailuropoda
melanoleuca]
Length = 324
Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 42/87 (48%), Gaps = 19/87 (21%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
IY C CGT L + + F +G+ G SF + S+ D I F + Y
Sbjct: 81 IYKCVVCGTPL-------FKSESKFDSGS-GWPSFHDVISS-------DAI-TFTDDFSY 124
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGP 90
G+ R T C+ CGA LG+I+DDGP
Sbjct: 125 -GMHRVETS--CSQCGAHLGHIFDDGP 148
>gi|262191422|ref|ZP_06049610.1| hypothetical protein VIH_001787 [Vibrio cholerae CT 5369-93]
gi|262032711|gb|EEY51261.1| hypothetical protein VIH_001787 [Vibrio cholerae CT 5369-93]
Length = 148
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 19/26 (73%)
Query: 66 IQRKRTKIKCNNCGALLGYIYDDGPP 91
+ R R +++CN C + LG+++ DGPP
Sbjct: 105 LARARVEVRCNTCESHLGHVFPDGPP 130
>gi|183178942|gb|ACC43951.1| methione sulfide reductase B [Philodina roseola]
Length = 129
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 49/118 (41%), Gaps = 35/118 (29%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
IY+C C ++L ++ H Y + +P+ + ID T + K
Sbjct: 43 IYTCVVCNSSL-FSSKHKYLSGTGWPS------FYQTIDDTSVATNVDRK---------- 85
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGPPAVDTPGQFHFGPSQVIPRYPRYRLKTKALR 121
+G+ R T++ C C A LG+++DDGP P Y RY + ALR
Sbjct: 86 YGLTR--TEVHCEKCKAHLGHVFDDGPR----------------PTYLRYCINGVALR 125
>gi|226470006|emb|CAX70284.1| peptide methionine sulfoxide reductase [Schistosoma japonicum]
Length = 137
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 38/86 (44%), Gaps = 12/86 (13%)
Query: 5 YSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDYW 64
Y C CG+ L ++S Y + +P+ K S DS + ED
Sbjct: 44 YLCVCCGSKL-FDSSSKYDSGSGWPSFYKTHGSDGRDDSQTNIIRTEDN----------- 91
Query: 65 GIQRKRTKIKCNNCGALLGYIYDDGP 90
+ R +I C CGA LG++++DGP
Sbjct: 92 SLDNMRIEISCKQCGAHLGHVFEDGP 117
>gi|428774325|ref|YP_007166113.1| methionine-R-sulfoxide reductase [Cyanobacterium stanieri PCC 7202]
gi|428688604|gb|AFZ48464.1| methionine-R-sulfoxide reductase [Cyanobacterium stanieri PCC 7202]
Length = 132
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 13/22 (59%), Positives = 18/22 (81%)
Query: 69 KRTKIKCNNCGALLGYIYDDGP 90
KRT++ C NC A LG+++DDGP
Sbjct: 91 KRTEVLCANCEAHLGHVFDDGP 112
>gi|348580779|ref|XP_003476156.1| PREDICTED: methionine-R-sulfoxide reductase B3, mitochondrial-like
[Cavia porcellus]
Length = 184
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 19/87 (21%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
IY+C CGT L + + F +G+ G SF + S++ F + Y
Sbjct: 76 IYNCVVCGTPL-------FKSETKFDSGS-GWPSFHDVISSE--------AITFTDDFSY 119
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGP 90
G+ R T C+ CGA LG+I+DDGP
Sbjct: 120 -GMHRVETS--CSQCGAHLGHIFDDGP 143
>gi|448391504|ref|ZP_21566650.1| methionine-R-sulfoxide reductase [Haloterrigena salina JCM 13891]
gi|445665825|gb|ELZ18500.1| methionine-R-sulfoxide reductase [Haloterrigena salina JCM 13891]
Length = 142
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 20/86 (23%)
Query: 5 YSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDYW 64
Y+C CG + L+ F +G G SF +D +D++ +T
Sbjct: 58 YACAGCG-------AELFDGDTKFESGC-GWPSFYDVD--------DDRVETRLDT---- 97
Query: 65 GIQRKRTKIKCNNCGALLGYIYDDGP 90
+RT++ C NCG LG++++DGP
Sbjct: 98 SHGMRRTEVLCANCGGHLGHVFEDGP 123
>gi|392399443|ref|YP_006436044.1| methionine-R-sulfoxide reductase [Flexibacter litoralis DSM 6794]
gi|390530521|gb|AFM06251.1| methionine-R-sulfoxide reductase [Flexibacter litoralis DSM 6794]
Length = 189
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 18/21 (85%)
Query: 70 RTKIKCNNCGALLGYIYDDGP 90
R ++ CNNCG+ LG++++DGP
Sbjct: 150 RVEVVCNNCGSHLGHVFNDGP 170
>gi|226326242|ref|ZP_03801760.1| hypothetical protein PROPEN_00084 [Proteus penneri ATCC 35198]
gi|225205320|gb|EEG87674.1| methionine-R-sulfoxide reductase [Proteus penneri ATCC 35198]
Length = 147
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 21/30 (70%)
Query: 61 LDYWGIQRKRTKIKCNNCGALLGYIYDDGP 90
+D + KRT+I+C C A LG++++DGP
Sbjct: 89 IDDFSHNMKRTEIRCQQCDAHLGHVFNDGP 118
>gi|229515612|ref|ZP_04405071.1| hypothetical protein VCB_003270 [Vibrio cholerae TMA 21]
gi|254226436|ref|ZP_04920023.1| PilB-related protein [Vibrio cholerae V51]
gi|125621058|gb|EAZ49405.1| PilB-related protein [Vibrio cholerae V51]
gi|229347381|gb|EEO12341.1| hypothetical protein VCB_003270 [Vibrio cholerae TMA 21]
Length = 148
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 19/27 (70%)
Query: 65 GIQRKRTKIKCNNCGALLGYIYDDGPP 91
+ R R +++CN C + LG+++ DGPP
Sbjct: 104 SLARARVEVRCNTCESHLGHVFPDGPP 130
>gi|374287242|ref|YP_005034327.1| putative oxidoreductase [Bacteriovorax marinus SJ]
gi|301165783|emb|CBW25355.1| putative oxidoreductase [Bacteriovorax marinus SJ]
Length = 163
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 21/87 (24%)
Query: 5 YSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAM-IDSTKFRLEKEDKIRPFFETLDY 63
Y C CG HL+ + + +G G SF M +D + EK D
Sbjct: 77 YICSNCGK-------HLFSSKTKYKSGT-GWPSFWMPLDKSAIE-EKHDST--------- 118
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGP 90
+G+ R T++ C+ CGA LG++++DGP
Sbjct: 119 YGMSR--TEVLCSRCGAHLGHVFNDGP 143
>gi|183178954|gb|ACC43962.1| methione sulfide reductase B [Philodina roseola]
Length = 129
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 49/118 (41%), Gaps = 35/118 (29%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
IY+C C ++L ++ H Y + +P+ + ID T + K
Sbjct: 43 IYTCVVCNSSL-FSSVHKYLSGTGWPS------FYQTIDDTSVATNVDRK---------- 85
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGPPAVDTPGQFHFGPSQVIPRYPRYRLKTKALR 121
+G+ R T++ C C A LG+++DDGP P Y RY + ALR
Sbjct: 86 YGLTR--TEVHCEKCKAHLGHVFDDGPR----------------PTYLRYCINGVALR 125
>gi|418402532|ref|ZP_12976043.1| methionine-R-sulfoxide reductase [Sinorhizobium meliloti
CCNWSX0020]
gi|359503557|gb|EHK76108.1| methionine-R-sulfoxide reductase [Sinorhizobium meliloti
CCNWSX0020]
Length = 168
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 13/22 (59%), Positives = 16/22 (72%)
Query: 70 RTKIKCNNCGALLGYIYDDGPP 91
RT+ C CG LG+I+DDGPP
Sbjct: 127 RTECHCRRCGGHLGHIFDDGPP 148
>gi|15964194|ref|NP_384547.1| hypothetical protein SMc01724 [Sinorhizobium meliloti 1021]
gi|334314842|ref|YP_004547461.1| methionine-R-sulfoxide reductase [Sinorhizobium meliloti AK83]
gi|384528179|ref|YP_005712267.1| methionine-R-sulfoxide reductase [Sinorhizobium meliloti BL225C]
gi|384534538|ref|YP_005718623.1| putative peptide methionine sulfoxide reductase msrB3
[Sinorhizobium meliloti SM11]
gi|433612226|ref|YP_007189024.1| methionine-R-sulfoxide reductase [Sinorhizobium meliloti GR4]
gi|15073370|emb|CAC41878.1| Putative peptide methionine sulfoxide reductase MsrB [Sinorhizobium
meliloti 1021]
gi|333810355|gb|AEG03024.1| methionine-R-sulfoxide reductase [Sinorhizobium meliloti BL225C]
gi|334093836|gb|AEG51847.1| methionine-R-sulfoxide reductase [Sinorhizobium meliloti AK83]
gi|336031430|gb|AEH77362.1| putative peptide methionine sulfoxide reductase msrB3
[Sinorhizobium meliloti SM11]
gi|429550416|gb|AGA05425.1| methionine-R-sulfoxide reductase [Sinorhizobium meliloti GR4]
Length = 164
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 13/22 (59%), Positives = 16/22 (72%)
Query: 70 RTKIKCNNCGALLGYIYDDGPP 91
RT+ C CG LG+I+DDGPP
Sbjct: 123 RTECHCRRCGGHLGHIFDDGPP 144
>gi|407719281|ref|YP_006838943.1| hypothetical protein BN406_00072 [Sinorhizobium meliloti Rm41]
gi|407317513|emb|CCM66117.1| hypothetical protein BN406_00072 [Sinorhizobium meliloti Rm41]
Length = 164
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 13/22 (59%), Positives = 16/22 (72%)
Query: 70 RTKIKCNNCGALLGYIYDDGPP 91
RT+ C CG LG+I+DDGPP
Sbjct: 123 RTECHCRRCGGHLGHIFDDGPP 144
>gi|356509415|ref|XP_003523445.1| PREDICTED: uncharacterized protein At4g08330, chloroplastic-like
[Glycine max]
Length = 82
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
Query: 33 KGTLSFAMIDSTKFRLEKEDKIRPFFETLDYWGIQRKRTKIKCNNCGALLGYIYDDGPPA 92
+G +SF +D ++F E + P+F WG R++TK+ C C + + P+
Sbjct: 10 RGIISFLNVDDSRFTRVDEIEFAPYFSKYS-WGFFRRKTKLLCRKCCNHIALHH--SFPS 66
Query: 93 VDTPGQFHFGPSQVI 107
T H P +
Sbjct: 67 YQTEQNHHHPPKHQV 81
>gi|167856408|ref|ZP_02479132.1| methionine sulfoxide reductase B [Haemophilus parasuis 29755]
gi|219872300|ref|YP_002476675.1| methionine sulfoxide reductase B [Haemophilus parasuis SH0165]
gi|167852468|gb|EDS23758.1| methionine sulfoxide reductase B [Haemophilus parasuis 29755]
gi|219692504|gb|ACL33727.1| methionine sulfoxide reductase B [Haemophilus parasuis SH0165]
Length = 131
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 21/30 (70%)
Query: 61 LDYWGIQRKRTKIKCNNCGALLGYIYDDGP 90
+D + + R R +I+C NC A +G+++ DGP
Sbjct: 75 VDDYSLGRHRVEIRCGNCDAHMGHVFKDGP 104
>gi|406037068|ref|ZP_11044432.1| peptide methionine sulfoxide reductase [Acinetobacter parvus DSM
16617 = CIP 108168]
Length = 139
Score = 35.8 bits (81), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 19/87 (21%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
IY C+ CG + L+ + + +G F +DST E ED
Sbjct: 44 IYVCRCCG-------AELFSSDTKYDSGCGWPSFFRPLDSTAIE-EHEDLSHGMV----- 90
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGP 90
RT+I C++C A LG++++DGP
Sbjct: 91 ------RTEIVCHDCDAHLGHVFEDGP 111
>gi|417824302|ref|ZP_12470893.1| methionine-R-sulfoxide reductase [Vibrio cholerae HE48]
gi|340047987|gb|EGR08910.1| methionine-R-sulfoxide reductase [Vibrio cholerae HE48]
Length = 154
Score = 35.8 bits (81), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 19/26 (73%)
Query: 66 IQRKRTKIKCNNCGALLGYIYDDGPP 91
+ R R +++CN C + LG+++ DGPP
Sbjct: 105 LARARVEVRCNTCESHLGHVFPDGPP 130
>gi|443327845|ref|ZP_21056453.1| methionine-R-sulfoxide reductase [Xenococcus sp. PCC 7305]
gi|442792574|gb|ELS02053.1| methionine-R-sulfoxide reductase [Xenococcus sp. PCC 7305]
Length = 139
Score = 35.8 bits (81), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 18/21 (85%)
Query: 70 RTKIKCNNCGALLGYIYDDGP 90
RT++ C+NCG LG++++DGP
Sbjct: 96 RTEVHCSNCGGHLGHVFNDGP 116
>gi|345878435|ref|ZP_08830149.1| putative 2,4 dihydroxyhept-2-ene-1,7-dioic acid aldolase
[endosymbiont of Riftia pachyptila (vent Ph05)]
gi|344224555|gb|EGV50944.1| putative 2,4 dihydroxyhept-2-ene-1,7-dioic acid aldolase
[endosymbiont of Riftia pachyptila (vent Ph05)]
Length = 136
Score = 35.8 bits (81), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 37/90 (41%), Gaps = 19/90 (21%)
Query: 2 ASIYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETL 61
A +YSC CG L + A+ F +G+ G S+ S E D
Sbjct: 45 AGVYSCSCCGNEL-------FDASAKFDSGS-GWPSYFQPVSADAVTEHADNSHGML--- 93
Query: 62 DYWGIQRKRTKIKCNNCGALLGYIYDDGPP 91
R ++ C +C A LG+++ DGPP
Sbjct: 94 --------RVEVLCGHCDAHLGHVFSDGPP 115
>gi|320164417|gb|EFW41316.1| peptide methionine sulfoxide reductase [Capsaspora owczarzaki ATCC
30864]
Length = 172
Score = 35.8 bits (81), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 19/87 (21%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
I+ C+ C NL L+ + F +G + +D + E++DK
Sbjct: 85 IFLCRAC----NLP---LFSSQAKFDSGTGWPSFYDAVDKKNIKTERDDK---------- 127
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGP 90
+G+ R + CN+C + LG+I+DDGP
Sbjct: 128 FGMVR--VEAMCNHCDSHLGHIFDDGP 152
>gi|431892020|gb|ELK02467.1| Methionine-R-sulfoxide reductase B3, mitochondrial [Pteropus
alecto]
Length = 224
Score = 35.8 bits (81), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 19/87 (21%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
IY C CGT L + + F +G+ G SF + S++ +D
Sbjct: 116 IYKCVVCGTPL-------FKSETKFDSGS-GWPSFHDVMSSEAITFTDDF---------S 158
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGP 90
+G+ R T C+ CGA LG+I+DDGP
Sbjct: 159 YGMHRVETS--CSQCGAHLGHIFDDGP 183
>gi|229521351|ref|ZP_04410770.1| hypothetical protein VIF_001881 [Vibrio cholerae TM 11079-80]
gi|421354005|ref|ZP_15804337.1| methionine-R-sulfoxide reductase [Vibrio cholerae HE-45]
gi|422306836|ref|ZP_16394007.1| methionine-R-sulfoxide reductase [Vibrio cholerae CP1035(8)]
gi|229341449|gb|EEO06452.1| hypothetical protein VIF_001881 [Vibrio cholerae TM 11079-80]
gi|395953130|gb|EJH63743.1| methionine-R-sulfoxide reductase [Vibrio cholerae HE-45]
gi|408625184|gb|EKK98101.1| methionine-R-sulfoxide reductase [Vibrio cholerae CP1035(8)]
Length = 154
Score = 35.8 bits (81), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 19/26 (73%)
Query: 66 IQRKRTKIKCNNCGALLGYIYDDGPP 91
+ R R +++CN C + LG+++ DGPP
Sbjct: 105 LARARVEVRCNTCESHLGHVFPDGPP 130
>gi|153212304|ref|ZP_01948092.1| PilB-related protein [Vibrio cholerae 1587]
gi|254291688|ref|ZP_04962475.1| PilB-related protein [Vibrio cholerae AM-19226]
gi|124116682|gb|EAY35502.1| PilB-related protein [Vibrio cholerae 1587]
gi|150422372|gb|EDN14332.1| PilB-related protein [Vibrio cholerae AM-19226]
Length = 148
Score = 35.8 bits (81), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 19/26 (73%)
Query: 66 IQRKRTKIKCNNCGALLGYIYDDGPP 91
+ R R +++CN C + LG+++ DGPP
Sbjct: 105 LARARVEVRCNTCESHLGHVFPDGPP 130
>gi|443244403|ref|YP_007377628.1| methionine sulfoxide reductase [Nonlabens dokdonensis DSW-6]
gi|442801802|gb|AGC77607.1| methionine sulfoxide reductase [Nonlabens dokdonensis DSW-6]
Length = 125
Score = 35.8 bits (81), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 26/43 (60%), Gaps = 8/43 (18%)
Query: 56 PFFETLDYWGIQRKR--------TKIKCNNCGALLGYIYDDGP 90
P F+ I+RKR T+I C+NCG+ LG++++DGP
Sbjct: 63 PSFDDEIEGAIERKRDTTHGMIRTEIMCSNCGSHLGHVFNDGP 105
>gi|15641249|ref|NP_230881.1| PilB-like protein [Vibrio cholerae O1 biovar El Tor str. N16961]
gi|121591217|ref|ZP_01678519.1| PilB-related protein [Vibrio cholerae 2740-80]
gi|121728805|ref|ZP_01681817.1| PilB-related protein [Vibrio cholerae V52]
gi|147675201|ref|YP_001216803.1| PilB-like protein [Vibrio cholerae O395]
gi|153819195|ref|ZP_01971862.1| PilB-related protein [Vibrio cholerae NCTC 8457]
gi|153823018|ref|ZP_01975685.1| PilB-related protein [Vibrio cholerae B33]
gi|227081408|ref|YP_002809959.1| PilB-like protein [Vibrio cholerae M66-2]
gi|227117703|ref|YP_002819599.1| PilB-related protein [Vibrio cholerae O395]
gi|229505175|ref|ZP_04394685.1| hypothetical protein VCF_000383 [Vibrio cholerae BX 330286]
gi|229511154|ref|ZP_04400633.1| hypothetical protein VCE_002561 [Vibrio cholerae B33]
gi|229518272|ref|ZP_04407716.1| hypothetical protein VCC_002296 [Vibrio cholerae RC9]
gi|229525836|ref|ZP_04415241.1| hypothetical protein VCA_003481 [Vibrio cholerae bv. albensis
VL426]
gi|229529681|ref|ZP_04419071.1| hypothetical protein VCG_002776 [Vibrio cholerae 12129(1)]
gi|229608195|ref|YP_002878843.1| hypothetical protein VCD_003113 [Vibrio cholerae MJ-1236]
gi|254848361|ref|ZP_05237711.1| PilB-related protein [Vibrio cholerae MO10]
gi|255745635|ref|ZP_05419583.1| conserved domain protein [Vibrio cholera CIRS 101]
gi|262159089|ref|ZP_06030201.1| conserved domain frequently associated with peptide methionine
sulfoxide reductase [Vibrio cholerae INDRE 91/1]
gi|262169447|ref|ZP_06037139.1| conserved domain frequently associated with peptide methionine
sulfoxide reductase [Vibrio cholerae RC27]
gi|298498670|ref|ZP_07008477.1| methionine-R-sulfoxide reductase [Vibrio cholerae MAK 757]
gi|360035136|ref|YP_004936899.1| peptide-methionine (R)-S-oxide reductase [Vibrio cholerae O1 str.
2010EL-1786]
gi|379741050|ref|YP_005333019.1| peptide-methionine (R)-S-oxide reductase [Vibrio cholerae IEC224]
gi|384424375|ref|YP_005633733.1| Peptide methionine sulfoxide reductase MsrB [Vibrio cholerae
LMA3984-4]
gi|417813259|ref|ZP_12459916.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-49A2]
gi|417816124|ref|ZP_12462756.1| methionine-R-sulfoxide reductase [Vibrio cholerae HCUF01]
gi|418332272|ref|ZP_12943206.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-06A1]
gi|418337015|ref|ZP_12945913.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-23A1]
gi|418343529|ref|ZP_12950315.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-28A1]
gi|418348683|ref|ZP_12953417.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-43A1]
gi|418354670|ref|ZP_12957391.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-61A1]
gi|419825730|ref|ZP_14349234.1| methionine-R-sulfoxide reductase [Vibrio cholerae CP1033(6)]
gi|421316506|ref|ZP_15767077.1| methionine-R-sulfoxide reductase [Vibrio cholerae CP1032(5)]
gi|421320851|ref|ZP_15771408.1| methionine-R-sulfoxide reductase [Vibrio cholerae CP1038(11)]
gi|421324843|ref|ZP_15775369.1| methionine-R-sulfoxide reductase [Vibrio cholerae CP1041(14)]
gi|421328505|ref|ZP_15779019.1| methionine-R-sulfoxide reductase [Vibrio cholerae CP1042(15)]
gi|421331526|ref|ZP_15782006.1| methionine-R-sulfoxide reductase [Vibrio cholerae CP1046(19)]
gi|421335099|ref|ZP_15785566.1| methionine-R-sulfoxide reductase [Vibrio cholerae CP1048(21)]
gi|421338994|ref|ZP_15789429.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-20A2]
gi|422891346|ref|ZP_16933726.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-40A1]
gi|422902557|ref|ZP_16937556.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-48A1]
gi|422906436|ref|ZP_16941268.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-70A1]
gi|422913022|ref|ZP_16947541.1| methionine-R-sulfoxide reductase [Vibrio cholerae HFU-02]
gi|422925502|ref|ZP_16958527.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-38A1]
gi|423144824|ref|ZP_17132433.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-19A1]
gi|423149502|ref|ZP_17136830.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-21A1]
gi|423153318|ref|ZP_17140512.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-22A1]
gi|423156130|ref|ZP_17143234.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-32A1]
gi|423159957|ref|ZP_17146925.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-33A2]
gi|423164675|ref|ZP_17151433.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-48B2]
gi|423730804|ref|ZP_17704118.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-17A1]
gi|423753967|ref|ZP_17712125.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-50A2]
gi|423892496|ref|ZP_17726179.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-62A1]
gi|423927274|ref|ZP_17730796.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-77A1]
gi|424001818|ref|ZP_17744904.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-17A2]
gi|424005978|ref|ZP_17748958.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-37A1]
gi|424023997|ref|ZP_17763657.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-62B1]
gi|424026848|ref|ZP_17766461.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-69A1]
gi|424586119|ref|ZP_18025709.1| methionine-R-sulfoxide reductase [Vibrio cholerae CP1030(3)]
gi|424594818|ref|ZP_18034151.1| methionine-R-sulfoxide reductase [Vibrio cholerae CP1040(13)]
gi|424598685|ref|ZP_18037879.1| methionine-R-sulfoxide reductase [Vibrio Cholerae CP1044(17)]
gi|424601425|ref|ZP_18040578.1| methionine-R-sulfoxide reductase [Vibrio cholerae CP1047(20)]
gi|424606414|ref|ZP_18045374.1| methionine-R-sulfoxide reductase [Vibrio cholerae CP1050(23)]
gi|424610245|ref|ZP_18049099.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-39A1]
gi|424613051|ref|ZP_18051854.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-41A1]
gi|424616868|ref|ZP_18055555.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-42A1]
gi|424621817|ref|ZP_18060340.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-47A1]
gi|424644794|ref|ZP_18082542.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-56A2]
gi|424652471|ref|ZP_18089947.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-57A2]
gi|424656373|ref|ZP_18093671.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-81A2]
gi|440709500|ref|ZP_20890157.1| putative frequently associated with peptide methionine sulfoxide
reductase [Vibrio cholerae 4260B]
gi|443503325|ref|ZP_21070306.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-64A1]
gi|443507232|ref|ZP_21074016.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-65A1]
gi|443511358|ref|ZP_21078013.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-67A1]
gi|443514912|ref|ZP_21081440.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-68A1]
gi|443518712|ref|ZP_21085122.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-71A1]
gi|443523600|ref|ZP_21089828.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-72A2]
gi|443531213|ref|ZP_21097228.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-7A1]
gi|443534987|ref|ZP_21100882.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-80A1]
gi|443538555|ref|ZP_21104410.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-81A1]
gi|449056270|ref|ZP_21734938.1| Peptide methionine sulfoxide reductase MsrB [Vibrio cholerae O1
str. Inaba G4222]
gi|9655718|gb|AAF94395.1| PilB-related protein [Vibrio cholerae O1 biovar El Tor str. N16961]
gi|121546942|gb|EAX57091.1| PilB-related protein [Vibrio cholerae 2740-80]
gi|121628893|gb|EAX61349.1| PilB-related protein [Vibrio cholerae V52]
gi|126510281|gb|EAZ72875.1| PilB-related protein [Vibrio cholerae NCTC 8457]
gi|126519446|gb|EAZ76669.1| PilB-related protein [Vibrio cholerae B33]
gi|146317084|gb|ABQ21623.1| PilB-related protein [Vibrio cholerae O395]
gi|227009296|gb|ACP05508.1| PilB-related protein [Vibrio cholerae M66-2]
gi|227013153|gb|ACP09363.1| PilB-related protein [Vibrio cholerae O395]
gi|229333455|gb|EEN98941.1| hypothetical protein VCG_002776 [Vibrio cholerae 12129(1)]
gi|229339417|gb|EEO04434.1| hypothetical protein VCA_003481 [Vibrio cholerae bv. albensis
VL426]
gi|229344987|gb|EEO09961.1| hypothetical protein VCC_002296 [Vibrio cholerae RC9]
gi|229351119|gb|EEO16060.1| hypothetical protein VCE_002561 [Vibrio cholerae B33]
gi|229357398|gb|EEO22315.1| hypothetical protein VCF_000383 [Vibrio cholerae BX 330286]
gi|229370850|gb|ACQ61273.1| hypothetical protein VCD_003113 [Vibrio cholerae MJ-1236]
gi|254844066|gb|EET22480.1| PilB-related protein [Vibrio cholerae MO10]
gi|255736710|gb|EET92107.1| conserved domain protein [Vibrio cholera CIRS 101]
gi|262022260|gb|EEY40969.1| conserved domain frequently associated with peptide methionine
sulfoxide reductase [Vibrio cholerae RC27]
gi|262029274|gb|EEY47926.1| conserved domain frequently associated with peptide methionine
sulfoxide reductase [Vibrio cholerae INDRE 91/1]
gi|297543003|gb|EFH79053.1| methionine-R-sulfoxide reductase [Vibrio cholerae MAK 757]
gi|327483928|gb|AEA78335.1| Peptide methionine sulfoxide reductase MsrB [Vibrio cholerae
LMA3984-4]
gi|340041850|gb|EGR02816.1| methionine-R-sulfoxide reductase [Vibrio cholerae HCUF01]
gi|340042563|gb|EGR03528.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-49A2]
gi|341623571|gb|EGS49095.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-70A1]
gi|341623643|gb|EGS49166.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-48A1]
gi|341624640|gb|EGS50125.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-40A1]
gi|341639459|gb|EGS64076.1| methionine-R-sulfoxide reductase [Vibrio cholerae HFU-02]
gi|341647372|gb|EGS71454.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-38A1]
gi|356419083|gb|EHH72641.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-06A1]
gi|356419771|gb|EHH73308.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-21A1]
gi|356424990|gb|EHH78379.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-19A1]
gi|356431534|gb|EHH84738.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-22A1]
gi|356432593|gb|EHH85790.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-23A1]
gi|356436273|gb|EHH89391.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-28A1]
gi|356441804|gb|EHH94680.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-32A1]
gi|356447422|gb|EHI00213.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-43A1]
gi|356449073|gb|EHI01833.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-33A2]
gi|356453072|gb|EHI05735.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-61A1]
gi|356455484|gb|EHI08126.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-48B2]
gi|356646290|gb|AET26345.1| peptide-methionine (R)-S-oxide reductase [Vibrio cholerae O1 str.
2010EL-1786]
gi|378794560|gb|AFC58031.1| peptide-methionine (R)-S-oxide reductase [Vibrio cholerae IEC224]
gi|395920513|gb|EJH31335.1| methionine-R-sulfoxide reductase [Vibrio cholerae CP1041(14)]
gi|395921463|gb|EJH32283.1| methionine-R-sulfoxide reductase [Vibrio cholerae CP1032(5)]
gi|395923833|gb|EJH34644.1| methionine-R-sulfoxide reductase [Vibrio cholerae CP1038(11)]
gi|395930011|gb|EJH40760.1| methionine-R-sulfoxide reductase [Vibrio cholerae CP1042(15)]
gi|395932790|gb|EJH43533.1| methionine-R-sulfoxide reductase [Vibrio cholerae CP1046(19)]
gi|395936960|gb|EJH47683.1| methionine-R-sulfoxide reductase [Vibrio cholerae CP1048(21)]
gi|395943942|gb|EJH54616.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-20A2]
gi|395960717|gb|EJH71078.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-56A2]
gi|395961773|gb|EJH72084.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-57A2]
gi|395965119|gb|EJH75303.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-42A1]
gi|395972362|gb|EJH81956.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-47A1]
gi|395976073|gb|EJH85536.1| methionine-R-sulfoxide reductase [Vibrio cholerae CP1030(3)]
gi|395977807|gb|EJH87205.1| methionine-R-sulfoxide reductase [Vibrio cholerae CP1047(20)]
gi|408008479|gb|EKG46457.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-39A1]
gi|408014892|gb|EKG52508.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-41A1]
gi|408035091|gb|EKG71570.1| methionine-R-sulfoxide reductase [Vibrio cholerae CP1040(13)]
gi|408043666|gb|EKG79650.1| methionine-R-sulfoxide reductase [Vibrio Cholerae CP1044(17)]
gi|408045111|gb|EKG80978.1| methionine-R-sulfoxide reductase [Vibrio cholerae CP1050(23)]
gi|408055682|gb|EKG90598.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-81A2]
gi|408609811|gb|EKK83187.1| methionine-R-sulfoxide reductase [Vibrio cholerae CP1033(6)]
gi|408625560|gb|EKK98466.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-17A1]
gi|408638608|gb|EKL10496.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-50A2]
gi|408656436|gb|EKL27531.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-77A1]
gi|408657669|gb|EKL28746.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-62A1]
gi|408847377|gb|EKL87448.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-37A1]
gi|408848566|gb|EKL88614.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-17A2]
gi|408871593|gb|EKM10827.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-62B1]
gi|408879932|gb|EKM18869.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-69A1]
gi|439975089|gb|ELP51225.1| putative frequently associated with peptide methionine sulfoxide
reductase [Vibrio cholerae 4260B]
gi|443432280|gb|ELS74809.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-64A1]
gi|443436265|gb|ELS82388.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-65A1]
gi|443439533|gb|ELS89231.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-67A1]
gi|443443742|gb|ELS97027.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-68A1]
gi|443447761|gb|ELT04403.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-71A1]
gi|443450332|gb|ELT10608.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-72A2]
gi|443458296|gb|ELT25692.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-7A1]
gi|443461849|gb|ELT32905.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-80A1]
gi|443466144|gb|ELT40803.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-81A1]
gi|448264093|gb|EMB01332.1| Peptide methionine sulfoxide reductase MsrB [Vibrio cholerae O1
str. Inaba G4222]
Length = 148
Score = 35.8 bits (81), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 19/26 (73%)
Query: 66 IQRKRTKIKCNNCGALLGYIYDDGPP 91
+ R R +++CN C + LG+++ DGPP
Sbjct: 105 LARARVEVRCNTCESHLGHVFPDGPP 130
>gi|410965024|ref|XP_003989052.1| PREDICTED: methionine-R-sulfoxide reductase B3, mitochondrial
[Felis catus]
Length = 185
Score = 35.8 bits (81), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 42/87 (48%), Gaps = 19/87 (21%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
IY C CGT L + + F +G+ G SF + S+ D I F + Y
Sbjct: 76 IYKCVVCGTPL-------FKSESKFDSGS-GWPSFHDVISS-------DAIT-FTDDFSY 119
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGP 90
G+ R T C+ CGA LG+I+DDGP
Sbjct: 120 -GMHRVETS--CSQCGAHLGHIFDDGP 143
>gi|355704573|gb|AES02272.1| methionine sulfoxide reductase B3 [Mustela putorius furo]
Length = 203
Score = 35.8 bits (81), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 42/87 (48%), Gaps = 19/87 (21%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
IY C CGT L + + F +G+ G SF + S+ D I F + Y
Sbjct: 93 IYKCVVCGTPL-------FKSESKFDSGS-GWPSFHDVISS-------DAIT-FTDDFSY 136
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGP 90
G+ R T C+ CGA LG+I+DDGP
Sbjct: 137 -GMHRVETS--CSQCGAHLGHIFDDGP 160
>gi|345864409|ref|ZP_08816610.1| peptide methionine sulfoxide reductase MsrB [endosymbiont of Tevnia
jerichonana (vent Tica)]
gi|345124430|gb|EGW54309.1| peptide methionine sulfoxide reductase MsrB [endosymbiont of Tevnia
jerichonana (vent Tica)]
Length = 134
Score = 35.8 bits (81), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 37/90 (41%), Gaps = 19/90 (21%)
Query: 2 ASIYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETL 61
A +YSC CG L + A+ F +G+ G S+ S E D
Sbjct: 43 AGVYSCSCCGNEL-------FDASAKFDSGS-GWPSYFQPVSADAVTEHADNSHGML--- 91
Query: 62 DYWGIQRKRTKIKCNNCGALLGYIYDDGPP 91
R ++ C +C A LG+++ DGPP
Sbjct: 92 --------RVEVLCGHCDAHLGHVFSDGPP 113
>gi|419829808|ref|ZP_14353294.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-1A2]
gi|419832781|ref|ZP_14356243.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-61A2]
gi|419836090|ref|ZP_14359533.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-46B1]
gi|421342601|ref|ZP_15793006.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-43B1]
gi|422916995|ref|ZP_16951323.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-02A1]
gi|423734637|ref|ZP_17707849.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-41B1]
gi|423819665|ref|ZP_17715923.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-55C2]
gi|423852998|ref|ZP_17719716.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-59A1]
gi|423880422|ref|ZP_17723318.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-60A1]
gi|423997410|ref|ZP_17740669.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-02C1]
gi|424008921|ref|ZP_17751868.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-44C1]
gi|424016119|ref|ZP_17755960.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-55B2]
gi|424019055|ref|ZP_17758851.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-59B1]
gi|424624600|ref|ZP_18063072.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-50A1]
gi|424629099|ref|ZP_18067396.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-51A1]
gi|424633131|ref|ZP_18071241.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-52A1]
gi|424636220|ref|ZP_18074235.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-55A1]
gi|424640159|ref|ZP_18078049.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-56A1]
gi|424648194|ref|ZP_18085864.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-57A1]
gi|443527017|ref|ZP_21093083.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-78A1]
gi|341638388|gb|EGS63035.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-02A1]
gi|395943118|gb|EJH53793.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-43B1]
gi|408014261|gb|EKG51919.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-50A1]
gi|408019946|gb|EKG57315.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-52A1]
gi|408025031|gb|EKG62101.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-56A1]
gi|408025760|gb|EKG62806.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-55A1]
gi|408034764|gb|EKG71249.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-57A1]
gi|408057495|gb|EKG92341.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-51A1]
gi|408621393|gb|EKK94396.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-1A2]
gi|408630938|gb|EKL03510.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-41B1]
gi|408635949|gb|EKL08125.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-55C2]
gi|408642759|gb|EKL14503.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-60A1]
gi|408643268|gb|EKL14998.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-59A1]
gi|408651425|gb|EKL22681.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-61A2]
gi|408853506|gb|EKL93296.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-02C1]
gi|408857955|gb|EKL97634.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-46B1]
gi|408861072|gb|EKM00671.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-55B2]
gi|408865072|gb|EKM04484.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-44C1]
gi|408868769|gb|EKM08083.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-59B1]
gi|443454593|gb|ELT18394.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-78A1]
Length = 152
Score = 35.8 bits (81), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 19/26 (73%)
Query: 66 IQRKRTKIKCNNCGALLGYIYDDGPP 91
+ R R +++CN C + LG+++ DGPP
Sbjct: 105 LARARVEVRCNTCESHLGHVFPDGPP 130
>gi|307152430|ref|YP_003887814.1| methionine-R-sulfoxide reductase [Cyanothece sp. PCC 7822]
gi|306982658|gb|ADN14539.1| methionine-R-sulfoxide reductase [Cyanothece sp. PCC 7822]
Length = 164
Score = 35.8 bits (81), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 17/22 (77%)
Query: 70 RTKIKCNNCGALLGYIYDDGPP 91
RT++ C CG LG++++DGPP
Sbjct: 125 RTEVHCRRCGGHLGHVFNDGPP 146
>gi|325108479|ref|YP_004269547.1| peptide methionine sulfoxide reductase MsrA [Planctomyces
brasiliensis DSM 5305]
gi|324968747|gb|ADY59525.1| Peptide methionine sulfoxide reductase msrA [Planctomyces
brasiliensis DSM 5305]
Length = 387
Score = 35.8 bits (81), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 18/21 (85%)
Query: 70 RTKIKCNNCGALLGYIYDDGP 90
RT+++C CGA LG++++DGP
Sbjct: 325 RTEVRCKKCGAHLGHVFNDGP 345
>gi|297578831|ref|ZP_06940759.1| conserved hypothetical protein [Vibrio cholerae RC385]
gi|297536425|gb|EFH75258.1| conserved hypothetical protein [Vibrio cholerae RC385]
Length = 148
Score = 35.8 bits (81), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 19/26 (73%)
Query: 66 IQRKRTKIKCNNCGALLGYIYDDGPP 91
+ R R +++CN C + LG+++ DGPP
Sbjct: 105 LARARVEVRCNTCESHLGHVFPDGPP 130
>gi|146298034|ref|YP_001192625.1| methionine-R-sulfoxide reductase [Flavobacterium johnsoniae UW101]
gi|146152452|gb|ABQ03306.1| methionine-R-sulfoxide reductase [Flavobacterium johnsoniae UW101]
Length = 184
Score = 35.8 bits (81), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 19/86 (22%)
Query: 5 YSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDYW 64
Y C CG NL ++ + ++ +P SF E+E+K F+ +
Sbjct: 97 YYCASCG-NLLFRSTAKFSSSCGWP-------SF---------FEQENKKSIVFKDDNSL 139
Query: 65 GIQRKRTKIKCNNCGALLGYIYDDGP 90
G++R T+ C CG LG+I+DDGP
Sbjct: 140 GMER--TEALCGRCGGHLGHIFDDGP 163
>gi|421347406|ref|ZP_15797788.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-46A1]
gi|395946466|gb|EJH57130.1| methionine-R-sulfoxide reductase [Vibrio cholerae HC-46A1]
Length = 147
Score = 35.8 bits (81), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 19/26 (73%)
Query: 66 IQRKRTKIKCNNCGALLGYIYDDGPP 91
+ R R +++CN C + LG+++ DGPP
Sbjct: 104 LARARVEVRCNTCESHLGHVFPDGPP 129
>gi|153826960|ref|ZP_01979627.1| PilB-related protein [Vibrio cholerae MZO-2]
gi|422922550|ref|ZP_16955734.1| methionine-R-sulfoxide reductase [Vibrio cholerae BJG-01]
gi|149739208|gb|EDM53480.1| PilB-related protein [Vibrio cholerae MZO-2]
gi|341645788|gb|EGS69914.1| methionine-R-sulfoxide reductase [Vibrio cholerae BJG-01]
Length = 148
Score = 35.8 bits (81), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 19/26 (73%)
Query: 66 IQRKRTKIKCNNCGALLGYIYDDGPP 91
+ R R +++CN C + LG+++ DGPP
Sbjct: 105 LARARVEVRCNTCESHLGHVFPDGPP 130
>gi|124022035|ref|YP_001016342.1| methionine sulfoxide reductase family protein [Prochlorococcus
marinus str. MIT 9303]
gi|123962321|gb|ABM77077.1| putative methionine sulfoxide reductase family protein
[Prochlorococcus marinus str. MIT 9303]
Length = 144
Score = 35.8 bits (81), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 12/22 (54%), Positives = 19/22 (86%)
Query: 69 KRTKIKCNNCGALLGYIYDDGP 90
+RT+I C+ CGA LG++++DGP
Sbjct: 101 ERTEINCSRCGAHLGHVFNDGP 122
>gi|429885521|ref|ZP_19367106.1| Peptide methionine sulfoxide reductase MsrB [Vibrio cholerae PS15]
gi|429227638|gb|EKY33627.1| Peptide methionine sulfoxide reductase MsrB [Vibrio cholerae PS15]
Length = 148
Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 19/26 (73%)
Query: 66 IQRKRTKIKCNNCGALLGYIYDDGPP 91
+ R R +++CN C + LG+++ DGPP
Sbjct: 105 LARARVEVRCNTCESHLGHVFPDGPP 130
>gi|153801892|ref|ZP_01956478.1| PilB-related protein [Vibrio cholerae MZO-3]
gi|417820652|ref|ZP_12467266.1| methionine-R-sulfoxide reductase [Vibrio cholerae HE39]
gi|421351004|ref|ZP_15801369.1| methionine-R-sulfoxide reductase [Vibrio cholerae HE-25]
gi|423952414|ref|ZP_17734128.1| methionine-R-sulfoxide reductase [Vibrio cholerae HE-40]
gi|423982066|ref|ZP_17737911.1| methionine-R-sulfoxide reductase [Vibrio cholerae HE-46]
gi|424590471|ref|ZP_18029908.1| methionine-R-sulfoxide reductase [Vibrio cholerae CP1037(10)]
gi|124122537|gb|EAY41280.1| PilB-related protein [Vibrio cholerae MZO-3]
gi|340038283|gb|EGQ99257.1| methionine-R-sulfoxide reductase [Vibrio cholerae HE39]
gi|395951449|gb|EJH62063.1| methionine-R-sulfoxide reductase [Vibrio cholerae HE-25]
gi|408034576|gb|EKG71069.1| methionine-R-sulfoxide reductase [Vibrio cholerae CP1037(10)]
gi|408660299|gb|EKL31320.1| methionine-R-sulfoxide reductase [Vibrio cholerae HE-40]
gi|408665066|gb|EKL35885.1| methionine-R-sulfoxide reductase [Vibrio cholerae HE-46]
Length = 148
Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 19/26 (73%)
Query: 66 IQRKRTKIKCNNCGALLGYIYDDGPP 91
+ R R +++CN C + LG+++ DGPP
Sbjct: 105 LARARVEVRCNTCESHLGHVFPDGPP 130
>gi|224372959|ref|YP_002607331.1| methionine-R-sulfoxide reductase [Nautilia profundicola AmH]
gi|223588900|gb|ACM92636.1| methionine-R-sulfoxide reductase [Nautilia profundicola AmH]
Length = 128
Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 43/108 (39%), Gaps = 21/108 (19%)
Query: 3 SIYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLD 62
IY C+ CGT L ++ H + + +P SF + I P E D
Sbjct: 36 GIYKCRCCGTEL-FSSEHKFDSGTGWP-------SFYI------------SIGPVLEQAD 75
Query: 63 YWGIQRKRTKIKCNNCGALLGYIYDDGPPAVDTPGQFHFGPSQVIPRY 110
+ G R + C NC LG+I+ DGP + + IP+Y
Sbjct: 76 FTG-GMTRIEAMCGNCRGHLGHIFGDGPAPTGIRYCINSASLKFIPKY 122
>gi|403269070|ref|XP_003926580.1| PREDICTED: methionine-R-sulfoxide reductase B3, mitochondrial
isoform 2 [Saimiri boliviensis boliviensis]
Length = 193
Score = 35.8 bits (81), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 41/87 (47%), Gaps = 19/87 (21%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
IY C CGT L + + F +G+ G SF + S++ F + Y
Sbjct: 83 IYKCVVCGTPL-------FKSETKFDSGS-GWPSFHDVISSE--------AITFTDDFSY 126
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGP 90
G+ R T C+ CGA LG+I+DDGP
Sbjct: 127 -GMHRVETS--CSQCGAHLGHIFDDGP 150
>gi|402771746|ref|YP_006591283.1| methionine-R-sulfoxide reductase [Methylocystis sp. SC2]
gi|401773766|emb|CCJ06632.1| Methionine-R-sulfoxide reductase [Methylocystis sp. SC2]
Length = 133
Score = 35.8 bits (81), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 19/22 (86%)
Query: 70 RTKIKCNNCGALLGYIYDDGPP 91
RT++ C+ CG+ LG++++DGPP
Sbjct: 94 RTEVHCSRCGSHLGHVFNDGPP 115
>gi|171463576|ref|YP_001797689.1| Methionine sulfoxide reductase B [Polynucleobacter necessarius
subsp. necessarius STIR1]
gi|171193114|gb|ACB44075.1| Methionine sulfoxide reductase B [Polynucleobacter necessarius
subsp. necessarius STIR1]
Length = 52
Score = 35.8 bits (81), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 5/41 (12%)
Query: 70 RTKIKCNNCGALLGYIYDDGPPAVD-----TPGQFHFGPSQ 105
RT+++C NC A LG+I++DGP HF PS
Sbjct: 3 RTEVRCANCDAHLGHIFEDGPMPTGLRYCINSASLHFEPSS 43
>gi|21356369|ref|NP_650030.1| SelR, isoform A [Drosophila melanogaster]
gi|45553335|ref|NP_996195.1| SelR, isoform I [Drosophila melanogaster]
gi|20127007|gb|AAM10931.1|AF486578_1 cysteine-containing selenoprotein R-like protein [Drosophila
melanogaster]
gi|17944415|gb|AAL48098.1| RE73235p [Drosophila melanogaster]
gi|23170949|gb|AAN13492.1| SelR, isoform A [Drosophila melanogaster]
gi|45446452|gb|AAS65138.1| SelR, isoform I [Drosophila melanogaster]
gi|220948852|gb|ACL86969.1| SelR-PA [synthetic construct]
gi|220958300|gb|ACL91693.1| SelR-PA [synthetic construct]
Length = 155
Score = 35.8 bits (81), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 41/87 (47%), Gaps = 18/87 (20%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
+Y C C +L ++ Y + +PA N ++D K L ++ I
Sbjct: 48 VYQCIVCHQDL-FSSETKYDSGCGWPAFND------VLDKGKVTLHRDASI--------- 91
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGP 90
+R RT+++C C A +G++++DGP
Sbjct: 92 --PERIRTEVRCARCNAHMGHVFEDGP 116
>gi|330752018|emb|CBL80530.1| methionine sulfoxide reductase B [uncultured Flavobacteriia
bacterium]
Length = 133
Score = 35.8 bits (81), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 12/21 (57%), Positives = 18/21 (85%)
Query: 70 RTKIKCNNCGALLGYIYDDGP 90
RT+I CNNCG +G++++DGP
Sbjct: 94 RTEIVCNNCGGHIGHLFNDGP 114
>gi|327478525|sp|Q5R930.2|MSRB3_PONAB RecName: Full=Methionine-R-sulfoxide reductase B3; Short=MsrB3;
Flags: Precursor
Length = 190
Score = 35.8 bits (81), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 41/87 (47%), Gaps = 19/87 (21%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
IY C CGT L + + F +G+ G SF + S++ F + Y
Sbjct: 81 IYKCVVCGTPL-------FKSETKFDSGS-GWPSFHDVISSE--------AITFTDDFSY 124
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGP 90
G+ R T C+ CGA LG+I+DDGP
Sbjct: 125 -GMHRVETS--CSQCGAHLGHIFDDGP 148
>gi|153829755|ref|ZP_01982422.1| PilB-related protein [Vibrio cholerae 623-39]
gi|148874789|gb|EDL72924.1| PilB-related protein [Vibrio cholerae 623-39]
Length = 148
Score = 35.8 bits (81), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 19/26 (73%)
Query: 66 IQRKRTKIKCNNCGALLGYIYDDGPP 91
+ R R +++CN C + LG+++ DGPP
Sbjct: 105 LARARVEVRCNTCESHLGHVFPDGPP 130
>gi|386284658|ref|ZP_10061877.1| peptide methionine sulfoxide reductase MsrB [Sulfurovum sp. AR]
gi|385344061|gb|EIF50778.1| peptide methionine sulfoxide reductase MsrB [Sulfurovum sp. AR]
Length = 132
Score = 35.8 bits (81), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 46/119 (38%), Gaps = 35/119 (29%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
IYSCK CGT L + + F +G F I+ ED I E ++
Sbjct: 45 IYSCKCCGTPL-------FSSETKFDSGTGWPSYFQSIN--------EDDI----EEIED 85
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGPPAVDTPGQFHFGPSQVIPRYPRYRLKTKALRI 122
R +++C CG LG+++ DGP P Y RY + + +L
Sbjct: 86 ASHGMVRVEVRCGACGCHLGHVFPDGP----------------APTYKRYCINSASLNF 128
>gi|407798567|ref|ZP_11145474.1| hypothetical protein OCGS_0547 [Oceaniovalibus guishaninsula
JLT2003]
gi|407059528|gb|EKE45457.1| hypothetical protein OCGS_0547 [Oceaniovalibus guishaninsula
JLT2003]
Length = 154
Score = 35.8 bits (81), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 19/26 (73%)
Query: 65 GIQRKRTKIKCNNCGALLGYIYDDGP 90
G+ RT++ C CG+ LG+++DDGP
Sbjct: 108 GLFMTRTEVHCARCGSHLGHVFDDGP 133
>gi|332707517|ref|ZP_08427560.1| methionine-R-sulfoxide reductase [Moorea producens 3L]
gi|332353713|gb|EGJ33210.1| methionine-R-sulfoxide reductase [Moorea producens 3L]
Length = 132
Score = 35.8 bits (81), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 39/88 (44%), Gaps = 19/88 (21%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
IY C CGT L N+ Y + +P+ FA I + E ++ +
Sbjct: 45 IYKCICCGTEL-FNSDTKYDSGTGWPS------FFAPIKEENVKEEPDNSLF-------- 89
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGPP 91
+RT++ C C A LG+++ DGPP
Sbjct: 90 ----MRRTEVLCAVCDAHLGHVFSDGPP 113
>gi|152993277|ref|YP_001358998.1| peptide methionine sulfoxide reductase MsrB [Sulfurovum sp.
NBC37-1]
gi|151425138|dbj|BAF72641.1| peptide-methionine (R)-S-oxide reductase [Sulfurovum sp. NBC37-1]
Length = 131
Score = 35.8 bits (81), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 19/87 (21%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
IYSCK C T L + + F +G G S+ FR +D I E ++
Sbjct: 45 IYSCKCCHTPL-------FSSDTKFDSGT-GWPSY-------FRPISDDVI----EEIED 85
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGP 90
+ R +++C NCG+ LG+++ DGP
Sbjct: 86 ASLGMVRVEVRCANCGSHLGHVFPDGP 112
>gi|402851196|ref|ZP_10899367.1| Peptide methionine sulfoxide reductase MsrB [Rhodovulum sp. PH10]
gi|402498566|gb|EJW10307.1| Peptide methionine sulfoxide reductase MsrB [Rhodovulum sp. PH10]
Length = 134
Score = 35.8 bits (81), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 52 DKIRPFFETLDYWGIQRKRTKIKCNNCGALLGYIYDDGPP 91
D + ET RT++ C+ CG+ LG+++ DGPP
Sbjct: 76 DPVEGAVETTQDRSFGMVRTEVHCSRCGSHLGHVFPDGPP 115
>gi|403269068|ref|XP_003926579.1| PREDICTED: methionine-R-sulfoxide reductase B3, mitochondrial
isoform 1 [Saimiri boliviensis boliviensis]
gi|403269072|ref|XP_003926581.1| PREDICTED: methionine-R-sulfoxide reductase B3, mitochondrial
isoform 3 [Saimiri boliviensis boliviensis]
Length = 186
Score = 35.8 bits (81), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 41/87 (47%), Gaps = 19/87 (21%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
IY C CGT L + + F +G+ G SF + S++ F + Y
Sbjct: 76 IYKCVVCGTPL-------FKSETKFDSGS-GWPSFHDVISSE--------AITFTDDFSY 119
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGP 90
G+ R T C+ CGA LG+I+DDGP
Sbjct: 120 -GMHRVETS--CSQCGAHLGHIFDDGP 143
>gi|298713724|emb|CBJ48915.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 365
Score = 35.8 bits (81), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 20/87 (22%), Positives = 37/87 (42%), Gaps = 20/87 (22%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
++ C CG LY ++ + +G FA + R+ +E + P
Sbjct: 271 VFVCAGCG-------QELYDSSTKYNSGTGWPSFFAPVSEEAVRVVREGGLFP------- 316
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGP 90
R +++C+NC LG+++ DGP
Sbjct: 317 ------RREVRCSNCDGHLGHVFPDGP 337
>gi|197099286|ref|NP_001127455.1| methionine-R-sulfoxide reductase B3 [Pongo abelii]
gi|55730010|emb|CAH91730.1| hypothetical protein [Pongo abelii]
Length = 185
Score = 35.8 bits (81), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 41/87 (47%), Gaps = 19/87 (21%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
IY C CGT L + + F +G+ G SF + S++ F + Y
Sbjct: 76 IYKCVVCGTPL-------FKSETKFDSGS-GWPSFHDVISSE--------AITFTDDFSY 119
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGP 90
G+ R T C+ CGA LG+I+DDGP
Sbjct: 120 -GMHRVETS--CSQCGAHLGHIFDDGP 143
>gi|387772138|ref|ZP_10128097.1| methionine-R-sulfoxide reductase [Haemophilus parahaemolyticus
HK385]
gi|386907783|gb|EIJ72485.1| methionine-R-sulfoxide reductase [Haemophilus parahaemolyticus
HK385]
Length = 131
Score = 35.8 bits (81), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 21/30 (70%)
Query: 61 LDYWGIQRKRTKIKCNNCGALLGYIYDDGP 90
LD + + R RT+I+C C + LG+++ DGP
Sbjct: 75 LDDYSLGRHRTEIRCGTCDSHLGHVFHDGP 104
>gi|402886735|ref|XP_003906777.1| PREDICTED: methionine-R-sulfoxide reductase B3, mitochondrial
isoform 1 [Papio anubis]
gi|402886739|ref|XP_003906779.1| PREDICTED: methionine-R-sulfoxide reductase B3, mitochondrial
isoform 3 [Papio anubis]
gi|402886741|ref|XP_003906780.1| PREDICTED: methionine-R-sulfoxide reductase B3, mitochondrial
isoform 4 [Papio anubis]
Length = 185
Score = 35.8 bits (81), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 41/87 (47%), Gaps = 19/87 (21%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
IY C CGT L + + F +G+ G SF + S++ F + Y
Sbjct: 76 IYKCVVCGTPL-------FKSETKFDSGS-GWPSFHDVISSE--------AITFTDDFSY 119
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGP 90
G+ R T C+ CGA LG+I+DDGP
Sbjct: 120 -GMHRVETS--CSQCGAHLGHIFDDGP 143
>gi|320166480|gb|EFW43379.1| peptide methionine sulfoxide reductase msrB, partial [Capsaspora
owczarzaki ATCC 30864]
Length = 135
Score = 35.8 bits (81), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 19/87 (21%), Positives = 40/87 (45%), Gaps = 19/87 (21%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
+YSC CG L+ ++ + +G+ F ++ L ++
Sbjct: 48 VYSCVCCG-------QMLFASSTKYDSGSGWPSFFDVLSKDAVNLSEDG----------- 89
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGP 90
+R +++C++CG+ LG+++DDGP
Sbjct: 90 -AFGMRRIEVECSSCGSHLGHVFDDGP 115
>gi|402886737|ref|XP_003906778.1| PREDICTED: methionine-R-sulfoxide reductase B3, mitochondrial
isoform 2 [Papio anubis]
Length = 188
Score = 35.8 bits (81), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 41/87 (47%), Gaps = 19/87 (21%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
IY C CGT L + + F +G+ G SF + S++ F + Y
Sbjct: 79 IYKCVVCGTPL-------FKSETKFDSGS-GWPSFHDVISSE--------AITFTDDFSY 122
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGP 90
G+ R T C+ CGA LG+I+DDGP
Sbjct: 123 -GMHRVETS--CSQCGAHLGHIFDDGP 146
>gi|389871798|ref|YP_006379217.1| methionine sulfoxide reductase B [Advenella kashmirensis WT001]
gi|388537047|gb|AFK62235.1| methionine sulfoxide reductase B [Advenella kashmirensis WT001]
Length = 130
Score = 35.8 bits (81), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 36/88 (40%), Gaps = 19/88 (21%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
IY+C CGT L + + F AG F ++ R E +
Sbjct: 43 IYTCVACGTPL-------FASDTKFDAGCGWPSYFEPLNPHNVREEVDTSH--------- 86
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGPP 91
RT++ CN C A LG+++ DGPP
Sbjct: 87 ---GMTRTEVLCNVCDAHLGHVFPDGPP 111
>gi|374330782|ref|YP_005080966.1| methionine-R-sulfoxide reductase [Pseudovibrio sp. FO-BEG1]
gi|359343570|gb|AEV36944.1| methionine-R-sulfoxide reductase [Pseudovibrio sp. FO-BEG1]
Length = 135
Score = 35.8 bits (81), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 37/87 (42%), Gaps = 19/87 (21%)
Query: 5 YSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDYW 64
YSC CG S L+ + F AG G SF + E +D
Sbjct: 49 YSCSACG-------SKLFKSDTKFDAGC-GWPSFFEAVAPDVVTEHKDTT---------- 90
Query: 65 GIQRKRTKIKCNNCGALLGYIYDDGPP 91
+ RT+I C +CG LG+++ DGPP
Sbjct: 91 -LGMVRTEICCASCGGHLGHVFPDGPP 116
>gi|296212260|ref|XP_002752755.1| PREDICTED: methionine-R-sulfoxide reductase B3, mitochondrial-like
[Callithrix jacchus]
Length = 186
Score = 35.8 bits (81), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 41/87 (47%), Gaps = 19/87 (21%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
IY C CGT L + + F +G+ G SF + S++ F + Y
Sbjct: 76 IYKCVVCGTPL-------FKSETKFDSGS-GWPSFHDVISSE--------AITFTDDFSY 119
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGP 90
G+ R T C+ CGA LG+I+DDGP
Sbjct: 120 -GMHRVETS--CSQCGAHLGHIFDDGP 143
>gi|284165957|ref|YP_003404236.1| methionine-R-sulfoxide reductase [Haloterrigena turkmenica DSM
5511]
gi|284015612|gb|ADB61563.1| methionine-R-sulfoxide reductase [Haloterrigena turkmenica DSM
5511]
Length = 142
Score = 35.8 bits (81), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 38/87 (43%), Gaps = 20/87 (22%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
Y+C CG + L+ F +G G SF +D + +++
Sbjct: 57 TYACAGCG-------AELFDGDTKFESGC-GWPSFYDVDDDRVETRQDNSH--------- 99
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGP 90
+RT++ C NCG LG++++DGP
Sbjct: 100 ---GMRRTEVLCANCGGHLGHVFEDGP 123
>gi|332221003|ref|XP_003259647.1| PREDICTED: methionine-R-sulfoxide reductase B3, mitochondrial
isoform 1 [Nomascus leucogenys]
gi|332221005|ref|XP_003259648.1| PREDICTED: methionine-R-sulfoxide reductase B3, mitochondrial
isoform 2 [Nomascus leucogenys]
gi|332221007|ref|XP_003259649.1| PREDICTED: methionine-R-sulfoxide reductase B3, mitochondrial
isoform 3 [Nomascus leucogenys]
Length = 185
Score = 35.8 bits (81), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 41/87 (47%), Gaps = 19/87 (21%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
IY C CGT L + + F +G+ G SF + S++ F + Y
Sbjct: 76 IYKCVVCGTPL-------FKSETKFDSGS-GWPSFHDVISSE--------AITFTDDFSY 119
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGP 90
G+ R T C+ CGA LG+I+DDGP
Sbjct: 120 -GMHRVETS--CSQCGAHLGHIFDDGP 143
>gi|427723229|ref|YP_007070506.1| Peptide methionine sulfoxide reductase msrB [Leptolyngbya sp. PCC
7376]
gi|427354949|gb|AFY37672.1| Peptide methionine sulfoxide reductase msrB [Leptolyngbya sp. PCC
7376]
Length = 133
Score = 35.4 bits (80), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 19/23 (82%)
Query: 69 KRTKIKCNNCGALLGYIYDDGPP 91
KRT++ C+ C A LG++++DGPP
Sbjct: 91 KRTEVLCSKCDAHLGHVFNDGPP 113
>gi|260913050|ref|ZP_05919532.1| methionine-R-sulfoxide reductase [Pasteurella dagmatis ATCC 43325]
gi|260632637|gb|EEX50806.1| methionine-R-sulfoxide reductase [Pasteurella dagmatis ATCC 43325]
Length = 130
Score = 35.4 bits (80), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 21/30 (70%)
Query: 61 LDYWGIQRKRTKIKCNNCGALLGYIYDDGP 90
LD + + R R +I+C C + LG++++DGP
Sbjct: 74 LDDYKLSRPRVEIRCGKCDSHLGHVFEDGP 103
>gi|392968088|ref|ZP_10333504.1| peptide-methionine (R)-S-oxide reductase [Fibrisoma limi BUZ 3]
gi|387842450|emb|CCH55558.1| peptide-methionine (R)-S-oxide reductase [Fibrisoma limi BUZ 3]
Length = 173
Score = 35.4 bits (80), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 12/21 (57%), Positives = 17/21 (80%)
Query: 70 RTKIKCNNCGALLGYIYDDGP 90
RT++ CN CG LG+++DDGP
Sbjct: 133 RTEVLCNVCGGHLGHVFDDGP 153
>gi|329764915|ref|ZP_08256504.1| methionine-R-sulfoxide reductase [Candidatus Nitrosoarchaeum limnia
SFB1]
gi|329138584|gb|EGG42831.1| methionine-R-sulfoxide reductase [Candidatus Nitrosoarchaeum limnia
SFB1]
Length = 133
Score = 35.4 bits (80), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 12/21 (57%), Positives = 17/21 (80%)
Query: 70 RTKIKCNNCGALLGYIYDDGP 90
RT++ C CGA LG+++DDGP
Sbjct: 92 RTEVNCKKCGAHLGHVFDDGP 112
>gi|444726481|gb|ELW67012.1| Methionine-R-sulfoxide reductase B3, mitochondrial [Tupaia
chinensis]
Length = 186
Score = 35.4 bits (80), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 41/87 (47%), Gaps = 19/87 (21%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
IY C CGT L + + F +G+ G SF + S++ F + Y
Sbjct: 76 IYKCVVCGTPL-------FKSETKFDSGS-GWPSFHDVISSE--------AITFTDDFSY 119
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGP 90
G+ R T C+ CGA LG+I+DDGP
Sbjct: 120 -GMHRVETS--CSQCGAHLGHIFDDGP 143
>gi|390955332|ref|YP_006419090.1| methionine-R-sulfoxide reductase [Aequorivita sublithincola DSM
14238]
gi|390421318|gb|AFL82075.1| methionine-R-sulfoxide reductase [Aequorivita sublithincola DSM
14238]
Length = 134
Score = 35.4 bits (80), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 12/21 (57%), Positives = 19/21 (90%)
Query: 70 RTKIKCNNCGALLGYIYDDGP 90
RT+I C+NCG+ LG++++DGP
Sbjct: 95 RTEILCSNCGSHLGHVFNDGP 115
>gi|393795412|ref|ZP_10378776.1| methionine-R-sulfoxide reductase [Candidatus Nitrosoarchaeum limnia
BG20]
Length = 133
Score = 35.4 bits (80), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 12/21 (57%), Positives = 17/21 (80%)
Query: 70 RTKIKCNNCGALLGYIYDDGP 90
RT++ C CGA LG+++DDGP
Sbjct: 92 RTEVNCKKCGAHLGHVFDDGP 112
>gi|375145081|ref|YP_005007522.1| methionine-R-sulfoxide reductase [Niastella koreensis GR20-10]
gi|361059127|gb|AEV98118.1| methionine-R-sulfoxide reductase [Niastella koreensis GR20-10]
Length = 170
Score = 35.4 bits (80), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 13/21 (61%), Positives = 17/21 (80%)
Query: 70 RTKIKCNNCGALLGYIYDDGP 90
RT++ C CGA LG+I+DDGP
Sbjct: 129 RTEVVCGRCGAHLGHIFDDGP 149
>gi|398836685|ref|ZP_10594017.1| methionine-R-sulfoxide reductase [Herbaspirillum sp. YR522]
gi|398211166|gb|EJM97789.1| methionine-R-sulfoxide reductase [Herbaspirillum sp. YR522]
Length = 131
Score = 35.4 bits (80), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 8/43 (18%)
Query: 57 FFETLDYWGIQRK--------RTKIKCNNCGALLGYIYDDGPP 91
+FE +D + K RT+I CN C A LG+++ DGPP
Sbjct: 71 YFEPIDAANVSEKVDRSYGMIRTEIICNVCDAHLGHVFPDGPP 113
>gi|340344601|ref|ZP_08667733.1| Methionine-R-sulfoxide reductase [Candidatus Nitrosoarchaeum
koreensis MY1]
gi|339519742|gb|EGP93465.1| Methionine-R-sulfoxide reductase [Candidatus Nitrosoarchaeum
koreensis MY1]
Length = 133
Score = 35.4 bits (80), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 12/21 (57%), Positives = 17/21 (80%)
Query: 70 RTKIKCNNCGALLGYIYDDGP 90
RT++ C CGA LG+++DDGP
Sbjct: 92 RTEVNCKKCGAHLGHVFDDGP 112
>gi|413962689|ref|ZP_11401916.1| methionine sulfoxide reductase B [Burkholderia sp. SJ98]
gi|413928521|gb|EKS67809.1| methionine sulfoxide reductase B [Burkholderia sp. SJ98]
Length = 138
Score = 35.4 bits (80), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 37/87 (42%), Gaps = 19/87 (21%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
+Y C CGT L + + F AG F I+ + EK D+
Sbjct: 52 VYDCVCCGTPL-------FESDTKFDAGCGWPSYFKPINGEVIQ-EKTDRSHGML----- 98
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGP 90
R ++ C NCGA LG++++DGP
Sbjct: 99 ------RIEVVCKNCGAHLGHVFEDGP 119
>gi|254424175|ref|ZP_05037893.1| SelR domain protein [Synechococcus sp. PCC 7335]
gi|196191664|gb|EDX86628.1| SelR domain protein [Synechococcus sp. PCC 7335]
Length = 187
Score = 35.4 bits (80), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 36/89 (40%), Gaps = 20/89 (22%)
Query: 2 ASIYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETL 61
A YSC CG L + + F +G +A +D+ ET
Sbjct: 100 AGTYSCAGCGLTL-------FSSEAKFDSGTGWPSFYASLDNA-------------VETR 139
Query: 62 DYWGIQRKRTKIKCNNCGALLGYIYDDGP 90
+RT++ C CG LG++++DGP
Sbjct: 140 IDRSFLMERTEVHCRRCGGHLGHVFNDGP 168
>gi|358462917|ref|ZP_09173020.1| Peptide methionine sulfoxide reductase msrB [Frankia sp. CN3]
gi|357071000|gb|EHI80633.1| Peptide methionine sulfoxide reductase msrB [Frankia sp. CN3]
Length = 146
Score = 35.4 bits (80), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 18/21 (85%)
Query: 70 RTKIKCNNCGALLGYIYDDGP 90
RT+++C CG+ LG+++DDGP
Sbjct: 103 RTEVRCGRCGSHLGHVFDDGP 123
>gi|435850319|ref|YP_007311905.1| methionine-R-sulfoxide reductase [Methanomethylovorans hollandica
DSM 15978]
gi|433660949|gb|AGB48375.1| methionine-R-sulfoxide reductase [Methanomethylovorans hollandica
DSM 15978]
Length = 132
Score = 35.4 bits (80), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 12/22 (54%), Positives = 19/22 (86%)
Query: 69 KRTKIKCNNCGALLGYIYDDGP 90
+RT++ C+ CG+ LG+I+DDGP
Sbjct: 91 QRTEVLCSRCGSHLGHIFDDGP 112
>gi|448377300|ref|ZP_21560090.1| peptide methionine sulfoxide reductase [Halovivax asiaticus JCM
14624]
gi|445655824|gb|ELZ08667.1| peptide methionine sulfoxide reductase [Halovivax asiaticus JCM
14624]
Length = 134
Score = 35.4 bits (80), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 39/88 (44%), Gaps = 24/88 (27%)
Query: 5 YSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSF--AMIDSTKFRLEKEDKIRPFFETLD 62
++C CG L + AT F G G SF A D + RL+ +R
Sbjct: 49 FACAGCGETL-------FDATTKFDHGC-GWPSFYDAPEDKVETRLDTSHGMR------- 93
Query: 63 YWGIQRKRTKIKCNNCGALLGYIYDDGP 90
RT++ C NCG LG++++DGP
Sbjct: 94 -------RTEVLCANCGGHLGHVFEDGP 114
>gi|433639321|ref|YP_007285081.1| methionine-R-sulfoxide reductase [Halovivax ruber XH-70]
gi|433291125|gb|AGB16948.1| methionine-R-sulfoxide reductase [Halovivax ruber XH-70]
Length = 134
Score = 35.4 bits (80), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 4/40 (10%)
Query: 51 EDKIRPFFETLDYWGIQRKRTKIKCNNCGALLGYIYDDGP 90
EDKI +T +RT++ C NCG LG++++DGP
Sbjct: 79 EDKIETRLDT----SHGMRRTEVLCANCGGHLGHVFEDGP 114
>gi|159462930|ref|XP_001689695.1| predicted protein [Chlamydomonas reinhardtii]
gi|158283683|gb|EDP09433.1| predicted protein [Chlamydomonas reinhardtii]
Length = 127
Score = 35.4 bits (80), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 20/32 (62%)
Query: 59 ETLDYWGIQRKRTKIKCNNCGALLGYIYDDGP 90
E DY I RT+++C C LG+++DDGP
Sbjct: 74 EVSDYSIIFMPRTEVRCRKCQGHLGHVFDDGP 105
>gi|407976567|ref|ZP_11157465.1| methionine-R-sulfoxide reductase [Nitratireductor indicus C115]
gi|407427920|gb|EKF40606.1| methionine-R-sulfoxide reductase [Nitratireductor indicus C115]
Length = 135
Score = 35.4 bits (80), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 39/87 (44%), Gaps = 19/87 (21%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
+Y C CG L + + + +G +A +D E K R +F T
Sbjct: 49 LYRCVCCGRPL-------FSSETKYDSGTGWPSFYAPVDKDAV---SEHKDRSWFMT--- 95
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGP 90
RT+I+C +C A LG++++DGP
Sbjct: 96 ------RTEIRCTDCDAHLGHVFEDGP 116
>gi|189345621|ref|YP_001942150.1| methionine-R-sulfoxide reductase [Chlorobium limicola DSM 245]
gi|189339768|gb|ACD89171.1| methionine-R-sulfoxide reductase [Chlorobium limicola DSM 245]
Length = 177
Score = 35.4 bits (80), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 8/43 (18%)
Query: 57 FFETLDYWGIQRK--------RTKIKCNNCGALLGYIYDDGPP 91
FFET+ ++ + RT++ C C A LG+++DDGPP
Sbjct: 114 FFETVRPGSVEYRTDMAFGMARTEVLCGRCDAHLGHVFDDGPP 156
>gi|350544466|ref|ZP_08914070.1| Peptide methionine sulfoxide reductase MsrB [Candidatus
Burkholderia kirkii UZHbot1]
gi|350527754|emb|CCD37428.1| Peptide methionine sulfoxide reductase MsrB [Candidatus
Burkholderia kirkii UZHbot1]
Length = 138
Score = 35.4 bits (80), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 37/87 (42%), Gaps = 19/87 (21%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
+Y C CGT L + + F AG F I+ + EK D+
Sbjct: 52 VYDCVCCGTPL-------FESDTKFDAGCGWPSYFKPINGEVIQ-EKTDRSHGML----- 98
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGP 90
R ++ C NCGA LG++++DGP
Sbjct: 99 ------RIEVLCKNCGAHLGHVFEDGP 119
>gi|448329573|ref|ZP_21518871.1| Peptide methionine sulfoxide reductase msrB [Natrinema versiforme
JCM 10478]
gi|445613832|gb|ELY67522.1| Peptide methionine sulfoxide reductase msrB [Natrinema versiforme
JCM 10478]
Length = 133
Score = 35.4 bits (80), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 40/91 (43%), Gaps = 30/91 (32%)
Query: 5 YSCKECGTNLNLNTSHLYPATVYFPAGNK-----GTLSFAMIDSTKFRLEKEDKIRPFFE 59
Y+C CGT L F +G K G SF +D +D++ +
Sbjct: 49 YACAGCGTEL-------------FESGTKFESDCGWPSFYDVD--------DDRVETRTD 87
Query: 60 TLDYWGIQRKRTKIKCNNCGALLGYIYDDGP 90
T +RT++ C NCG LG++++DGP
Sbjct: 88 T----SHGMRRTEVVCANCGGHLGHVFEDGP 114
>gi|260768475|ref|ZP_05877409.1| PilB-related protein [Vibrio furnissii CIP 102972]
gi|375131018|ref|YP_004993118.1| PilB-like protein [Vibrio furnissii NCTC 11218]
gi|260616505|gb|EEX41690.1| PilB-related protein [Vibrio furnissii CIP 102972]
gi|315180192|gb|ADT87106.1| PilB-related protein [Vibrio furnissii NCTC 11218]
Length = 149
Score = 35.4 bits (80), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 18/22 (81%)
Query: 70 RTKIKCNNCGALLGYIYDDGPP 91
R +++CN+C A LG+++ DGPP
Sbjct: 109 RVEVRCNSCDAHLGHVFPDGPP 130
>gi|119617557|gb|EAW97151.1| methionine sulfoxide reductase B3 [Homo sapiens]
Length = 180
Score = 35.4 bits (80), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 38/87 (43%), Gaps = 19/87 (21%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
IY C CGT L + + F +G+ +I+S F + Y
Sbjct: 71 IYKCVVCGTPL-------FKSETKFDSGSGWPSFHDVINSEAIT---------FTDDFSY 114
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGP 90
G+ R T C+ CGA LG+I+DDGP
Sbjct: 115 -GMHRVETS--CSQCGAHLGHIFDDGP 138
>gi|336253611|ref|YP_004596718.1| peptide methionine sulfoxide reductase msrB [Halopiger xanaduensis
SH-6]
gi|335337600|gb|AEH36839.1| Peptide methionine sulfoxide reductase msrB [Halopiger xanaduensis
SH-6]
Length = 140
Score = 35.4 bits (80), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 20/86 (23%)
Query: 5 YSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDYW 64
Y+C CG + L+ + F +G G SF +D +DK+ +T
Sbjct: 53 YACTACG-------AELFDSETKFESGC-GWPSFYDVD--------DDKVETRVDT---- 92
Query: 65 GIQRKRTKIKCNNCGALLGYIYDDGP 90
+RT++ C CG LG++++DGP
Sbjct: 93 SHGMRRTEVVCAECGGHLGHVFEDGP 118
>gi|421856349|ref|ZP_16288716.1| peptide methionine sulfoxide reductase MsrB [Acinetobacter
radioresistens DSM 6976 = NBRC 102413]
gi|403188288|dbj|GAB74917.1| peptide methionine sulfoxide reductase MsrB [Acinetobacter
radioresistens DSM 6976 = NBRC 102413]
Length = 139
Score = 35.4 bits (80), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 40/87 (45%), Gaps = 19/87 (21%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
+Y+C+ CG + L+ + + +G F I+ST E ED
Sbjct: 44 VYTCRCCG-------AELFSSETKYDSGCGWPSFFRPINSTAIE-EHEDLSHGMV----- 90
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGP 90
RT+I C++C A LG++++DGP
Sbjct: 91 ------RTEIVCHHCDAHLGHVFEDGP 111
>gi|335043599|ref|ZP_08536626.1| conserved domain frequently associated with peptide methionine
sulfoxide reductase [Methylophaga aminisulfidivorans MP]
gi|333790213|gb|EGL56095.1| conserved domain frequently associated with peptide methionine
sulfoxide reductase [Methylophaga aminisulfidivorans MP]
Length = 132
Score = 35.4 bits (80), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 12/21 (57%), Positives = 18/21 (85%)
Query: 70 RTKIKCNNCGALLGYIYDDGP 90
RT+++C +C A LG+I+DDGP
Sbjct: 92 RTEVRCQSCDAHLGHIFDDGP 112
>gi|390179491|ref|XP_003736910.1| GA19702, isoform D [Drosophila pseudoobscura pseudoobscura]
gi|388859874|gb|EIM52983.1| GA19702, isoform D [Drosophila pseudoobscura pseudoobscura]
Length = 156
Score = 35.4 bits (80), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 41/87 (47%), Gaps = 18/87 (20%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
+Y C C +L ++ Y + +PA N ++D K L ++ I
Sbjct: 48 VYQCIVCHQDL-FSSDTKYDSGCGWPAFND------VLDKGKVTLHRDASI--------- 91
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGP 90
+R RT+++C C A +G++++DGP
Sbjct: 92 --PERIRTEVRCARCNAHMGHVFEDGP 116
>gi|413950104|gb|AFW82753.1| hypothetical protein ZEAMMB73_019077, partial [Zea mays]
Length = 174
Score = 35.4 bits (80), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 50/124 (40%), Gaps = 29/124 (23%)
Query: 6 SCKECGTNLNLNTSH-------LYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFF 58
SC CG +L L +S Y A +G ++F ID +F E F
Sbjct: 48 SCGACGYDLRLRSSDRNTAGIVGAGGAAYGRAARRGVVAFDAIDDARFGHADE------F 101
Query: 59 ETLDYWGIQR--KRTKIKCNNCGALLGYIYDDGPPAVDTPGQFHFGPSQVIPRYPRYRLK 116
+D + +RT++ C CGA LG+ YDD Q R PRY +K
Sbjct: 102 RCVDLRARRLFVRRTRLLCRKCGAGLGFGYDD--------------RGQDGARPPRYDIK 147
Query: 117 TKAL 120
+AL
Sbjct: 148 IRAL 151
>gi|345776484|ref|XP_850508.2| PREDICTED: methionine-R-sulfoxide reductase B3, mitochondrial
[Canis lupus familiaris]
Length = 183
Score = 35.4 bits (80), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 42/87 (48%), Gaps = 19/87 (21%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
IY C CGT L + + F +G+ G SF + S+ D I F + Y
Sbjct: 76 IYKCVVCGTPL-------FRSESKFDSGS-GWPSFHDVISS-------DAI-TFTDDFSY 119
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGP 90
G+ R T C+ CGA LG+I+DDGP
Sbjct: 120 -GMHRVETS--CSQCGAHLGHIFDDGP 143
>gi|323359203|ref|YP_004225599.1| peptide methionine sulfoxide reductase [Microbacterium testaceum
StLB037]
gi|323275574|dbj|BAJ75719.1| conserved domain frequently associated with peptide methionine
sulfoxide reductase [Microbacterium testaceum StLB037]
Length = 135
Score = 35.4 bits (80), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 21/89 (23%)
Query: 2 ASIYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRP-FFET 60
A +Y+C CG L F +G K DS + +RP E
Sbjct: 43 AGLYACAACGAEL-------------FQSGTK-------FDSHCGWPSFYESVRPEAVEL 82
Query: 61 LDYWGIQRKRTKIKCNNCGALLGYIYDDG 89
+D +RT+++C NCG+ LG+++ DG
Sbjct: 83 IDDNSHGMQRTEVRCANCGSHLGHVFPDG 111
>gi|237745482|ref|ZP_04575962.1| methionine sulfoxide reductase B [Oxalobacter formigenes HOxBLS]
gi|229376833|gb|EEO26924.1| methionine sulfoxide reductase B [Oxalobacter formigenes HOxBLS]
Length = 142
Score = 35.4 bits (80), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 38/88 (43%), Gaps = 19/88 (21%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
+Y C CGT L L+ + F +G F ID +EK D
Sbjct: 47 VYYCVNCGTPLFLSDTK-------FDSGCGWPSFFKPIDPENV-IEKVDT---------- 88
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGPP 91
+ RT+I C C A LG+++DDGPP
Sbjct: 89 -RLGMVRTEIICAICDAHLGHVFDDGPP 115
>gi|384098556|ref|ZP_09999670.1| methionine-R-sulfoxide reductase [Imtechella halotolerans K1]
gi|383835251|gb|EID74678.1| methionine-R-sulfoxide reductase [Imtechella halotolerans K1]
Length = 172
Score = 35.4 bits (80), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Query: 69 KRTKIKCNNCGALLGYIYDDGPPAVDTPGQFHFGPSQVIPRYPR 112
+R ++ C NCG LG+++DDGP T G+ H S + P+
Sbjct: 128 ERLEVHCKNCGGHLGHVFDDGP--RKTTGKRHCVNSAALKFKPK 169
>gi|108803505|ref|YP_643442.1| protein-methionine-S-oxide reductase [Rubrobacter xylanophilus DSM
9941]
gi|108764748|gb|ABG03630.1| Protein-methionine-S-oxide reductase [Rubrobacter xylanophilus DSM
9941]
Length = 138
Score = 35.4 bits (80), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 16/55 (29%)
Query: 69 KRTKIKCNNCGALLGYIYDDGPPAVDTPGQFHFGPSQVIPRYPRYRLKTKALRIS 123
+RT++ C C A LG+++DDGPP P RY + + ALR S
Sbjct: 94 RRTEVLCAACDAHLGHVFDDGPP----------------PTGRRYCMNSAALRFS 132
>gi|300311561|ref|YP_003775653.1| peptide methionine sulfoxide reductase [Herbaspirillum seropedicae
SmR1]
gi|300074346|gb|ADJ63745.1| peptide methionine sulfoxide reductase protein [Herbaspirillum
seropedicae SmR1]
Length = 131
Score = 35.0 bits (79), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 8/43 (18%)
Query: 57 FFETLDYWGIQRK--------RTKIKCNNCGALLGYIYDDGPP 91
+FE +D ++ K RT+I CN C A LG+++ DGPP
Sbjct: 71 YFEPIDPANVREKVDRSYGMIRTEIICNVCDAHLGHVFPDGPP 113
>gi|414343036|ref|YP_006984557.1| transcriptional regulator [Gluconobacter oxydans H24]
gi|411028371|gb|AFW01626.1| transcriptional regulator [Gluconobacter oxydans H24]
gi|453330370|dbj|GAC87598.1| peptide methionine sulfoxide reductase [Gluconobacter thailandicus
NBRC 3255]
Length = 139
Score = 35.0 bits (79), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 37/90 (41%), Gaps = 20/90 (22%)
Query: 2 ASIYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETL 61
A IY+C CG +L + +T + +G+ F ++ ET
Sbjct: 47 AGIYACAGCGRDL-------FSSTTKYESGSGWPSFFQPLEGA-------------VETT 86
Query: 62 DYWGIQRKRTKIKCNNCGALLGYIYDDGPP 91
RT++ C NC LG+++ DGPP
Sbjct: 87 QDGSHGMVRTEVHCANCQGHLGHVFPDGPP 116
>gi|348536439|ref|XP_003455704.1| PREDICTED: methionine-R-sulfoxide reductase B3, mitochondrial-like
[Oreochromis niloticus]
Length = 189
Score = 35.0 bits (79), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 40/87 (45%), Gaps = 19/87 (21%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
Y+C CG S L+ + F +G+ G SF+ L KE+ I D
Sbjct: 76 TYTCVVCG-------SPLFSSNSKFDSGS-GWPSFS-------DLMKEESITK----ADD 116
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGP 90
+ R + C+ CGA LG+++DDGP
Sbjct: 117 FSYGMHRVEATCSQCGAHLGHLFDDGP 143
>gi|256419868|ref|YP_003120521.1| methionine-R-sulfoxide reductase [Chitinophaga pinensis DSM 2588]
gi|256034776|gb|ACU58320.1| methionine-R-sulfoxide reductase [Chitinophaga pinensis DSM 2588]
Length = 154
Score = 35.0 bits (79), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 12/22 (54%), Positives = 17/22 (77%)
Query: 70 RTKIKCNNCGALLGYIYDDGPP 91
RT++ C C A LG+++DDGPP
Sbjct: 105 RTEVMCGRCKAHLGHVFDDGPP 126
>gi|119892367|ref|XP_875267.2| PREDICTED: methionine-R-sulfoxide reductase B3, mitochondrial
isoform 4 [Bos taurus]
gi|297474691|ref|XP_002687588.1| PREDICTED: methionine-R-sulfoxide reductase B3, mitochondrial
isoform 2 [Bos taurus]
gi|296487530|tpg|DAA29643.1| TPA: methionine sulfoxide reductase B3-like isoform 2 [Bos taurus]
Length = 191
Score = 35.0 bits (79), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 40/87 (45%), Gaps = 19/87 (21%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
IY C CGT L + + F +G+ +I+S D I F + Y
Sbjct: 83 IYKCVVCGTPL-------FKSETKFDSGSGWPSFHDVINS--------DAIT-FTDDFSY 126
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGP 90
G+ R T C+ CGA LG+I+DDGP
Sbjct: 127 -GMHRVETS--CSQCGAHLGHIFDDGP 150
>gi|37620216|ref|NP_932346.1| methionine-R-sulfoxide reductase B3 isoform 1 precursor [Homo
sapiens]
gi|114643951|ref|XP_001163080.1| PREDICTED: methionine-R-sulfoxide reductase B3, mitochondrial
isoform 1 [Pan troglodytes]
gi|327478523|sp|Q8IXL7.2|MSRB3_HUMAN RecName: Full=Methionine-R-sulfoxide reductase B3; Short=MsrB3;
Flags: Precursor
gi|37181574|gb|AAQ88596.1| SPRR1965 [Homo sapiens]
gi|194386642|dbj|BAG61131.1| unnamed protein product [Homo sapiens]
gi|410213290|gb|JAA03864.1| methionine sulfoxide reductase B3 [Pan troglodytes]
gi|410213294|gb|JAA03866.1| methionine sulfoxide reductase B3 [Pan troglodytes]
gi|410250416|gb|JAA13175.1| methionine sulfoxide reductase B3 [Pan troglodytes]
gi|410250418|gb|JAA13176.1| methionine sulfoxide reductase B3 [Pan troglodytes]
gi|410250420|gb|JAA13177.1| methionine sulfoxide reductase B3 [Pan troglodytes]
gi|410250422|gb|JAA13178.1| methionine sulfoxide reductase B3 [Pan troglodytes]
gi|410302112|gb|JAA29656.1| methionine sulfoxide reductase B3 [Pan troglodytes]
gi|410355303|gb|JAA44255.1| methionine sulfoxide reductase B3 [Pan troglodytes]
Length = 192
Score = 35.0 bits (79), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 39/88 (44%), Gaps = 21/88 (23%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
IY C CGT L + + F +G+ +I+S T D+
Sbjct: 83 IYKCVVCGTPL-------FKSETKFDSGSGWPSFHDVINSEAITF-----------TDDF 124
Query: 64 -WGIQRKRTKIKCNNCGALLGYIYDDGP 90
+G+ R T C+ CGA LG+I+DDGP
Sbjct: 125 SYGMHRVETS--CSQCGAHLGHIFDDGP 150
>gi|415939652|ref|ZP_11555545.1| Peptide methionine sulfoxide reductase [Herbaspirillum
frisingense GSF30]
gi|407759286|gb|EKF69001.1| Peptide methionine sulfoxide reductase [Herbaspirillum
frisingense GSF30]
Length = 113
Score = 35.0 bits (79), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 8/43 (18%)
Query: 57 FFETLDYWGIQRK--------RTKIKCNNCGALLGYIYDDGPP 91
+FE +D ++ K RT+I CN C A LG+++ DGPP
Sbjct: 53 YFEPIDPANVREKVDRSYGMIRTEIICNVCDAHLGHVFPDGPP 95
>gi|298209053|ref|YP_003717232.1| SelR-like methionine sulfoxide reductase [Croceibacter atlanticus
HTCC2559]
gi|83848980|gb|EAP86849.1| SelR-like methionine sulfoxide reductase [Croceibacter atlanticus
HTCC2559]
Length = 131
Score = 35.0 bits (79), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 12/21 (57%), Positives = 17/21 (80%)
Query: 70 RTKIKCNNCGALLGYIYDDGP 90
RT+I C NCG +G+++DDGP
Sbjct: 93 RTEILCANCGGHIGHVFDDGP 113
>gi|119892369|ref|XP_001250066.1| PREDICTED: methionine-R-sulfoxide reductase B3, mitochondrial
isoform 1 [Bos taurus]
gi|119892371|ref|XP_001250113.1| PREDICTED: methionine-R-sulfoxide reductase B3, mitochondrial
isoform 2 [Bos taurus]
gi|119892373|ref|XP_001250169.1| PREDICTED: methionine-R-sulfoxide reductase B3, mitochondrial
isoform 3 [Bos taurus]
gi|297474689|ref|XP_002687587.1| PREDICTED: methionine-R-sulfoxide reductase B3, mitochondrial
isoform 1 [Bos taurus]
gi|297474693|ref|XP_002687589.1| PREDICTED: methionine-R-sulfoxide reductase B3, mitochondrial
isoform 3 [Bos taurus]
gi|297474695|ref|XP_002687590.1| PREDICTED: methionine-R-sulfoxide reductase B3, mitochondrial
isoform 4 [Bos taurus]
gi|296487529|tpg|DAA29642.1| TPA: methionine sulfoxide reductase B3-like isoform 1 [Bos taurus]
gi|296487531|tpg|DAA29644.1| TPA: methionine sulfoxide reductase B3-like isoform 3 [Bos taurus]
gi|296487532|tpg|DAA29645.1| TPA: methionine sulfoxide reductase B3-like isoform 4 [Bos taurus]
Length = 184
Score = 35.0 bits (79), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 40/87 (45%), Gaps = 19/87 (21%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
IY C CGT L + + F +G+ +I+S D I F + Y
Sbjct: 76 IYKCVVCGTPL-------FKSETKFDSGSGWPSFHDVINS--------DAIT-FTDDFSY 119
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGP 90
G+ R T C+ CGA LG+I+DDGP
Sbjct: 120 -GMHRVETS--CSQCGAHLGHIFDDGP 143
>gi|221046118|dbj|BAH14736.1| unnamed protein product [Homo sapiens]
Length = 192
Score = 35.0 bits (79), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 39/88 (44%), Gaps = 21/88 (23%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
IY C CGT L + + F +G+ +I+S T D+
Sbjct: 83 IYKCVVCGTPL-------FKSETKFDSGSGWPSFHDVINSEAITF-----------TDDF 124
Query: 64 -WGIQRKRTKIKCNNCGALLGYIYDDGP 90
+G+ R T C+ CGA LG+I+DDGP
Sbjct: 125 SYGMHRVETS--CSQCGAHLGHIFDDGP 150
>gi|193211728|ref|YP_001997681.1| methionine-R-sulfoxide reductase [Chlorobaculum parvum NCIB 8327]
gi|193085205|gb|ACF10481.1| methionine-R-sulfoxide reductase [Chlorobaculum parvum NCIB 8327]
Length = 147
Score = 35.0 bits (79), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 8/43 (18%)
Query: 57 FFETLDYWGIQRK--------RTKIKCNNCGALLGYIYDDGPP 91
FFET+ ++ + RT++ C C A LG+++DDGPP
Sbjct: 85 FFETVRPGSVEYREDNSYGMMRTEVLCGRCDAHLGHVFDDGPP 127
>gi|73089054|ref|NP_001026849.1| methionine-R-sulfoxide reductase B3 isoform 2 precursor [Homo
sapiens]
gi|301336162|ref|NP_001180389.1| methionine-R-sulfoxide reductase B3 isoform 2 precursor [Homo
sapiens]
gi|301336164|ref|NP_001180390.1| methionine-R-sulfoxide reductase B3 isoform 2 precursor [Homo
sapiens]
gi|114643955|ref|XP_001163156.1| PREDICTED: methionine-R-sulfoxide reductase B3, mitochondrial
isoform 3 [Pan troglodytes]
gi|114643957|ref|XP_001163188.1| PREDICTED: methionine-R-sulfoxide reductase B3, mitochondrial
isoform 4 [Pan troglodytes]
gi|114643959|ref|XP_001163219.1| PREDICTED: methionine-R-sulfoxide reductase B3, mitochondrial
isoform 5 [Pan troglodytes]
gi|25123199|gb|AAH40053.1| MSRB3 protein [Homo sapiens]
gi|57997582|emb|CAI46018.1| hypothetical protein [Homo sapiens]
gi|158259629|dbj|BAF85773.1| unnamed protein product [Homo sapiens]
gi|312153134|gb|ADQ33079.1| methionine sulfoxide reductase B3 [synthetic construct]
gi|410213292|gb|JAA03865.1| methionine sulfoxide reductase B3 [Pan troglodytes]
gi|410250424|gb|JAA13179.1| methionine sulfoxide reductase B3 [Pan troglodytes]
gi|410302108|gb|JAA29654.1| methionine sulfoxide reductase B3 [Pan troglodytes]
gi|410302110|gb|JAA29655.1| methionine sulfoxide reductase B3 [Pan troglodytes]
gi|410355299|gb|JAA44253.1| methionine sulfoxide reductase B3 [Pan troglodytes]
gi|410355301|gb|JAA44254.1| methionine sulfoxide reductase B3 [Pan troglodytes]
gi|410355305|gb|JAA44256.1| methionine sulfoxide reductase B3 [Pan troglodytes]
gi|410355307|gb|JAA44257.1| methionine sulfoxide reductase B3 [Pan troglodytes]
Length = 185
Score = 35.0 bits (79), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 39/88 (44%), Gaps = 21/88 (23%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
IY C CGT L + + F +G+ +I+S T D+
Sbjct: 76 IYKCVVCGTPL-------FKSETKFDSGSGWPSFHDVINSEAITF-----------TDDF 117
Query: 64 -WGIQRKRTKIKCNNCGALLGYIYDDGP 90
+G+ R T C+ CGA LG+I+DDGP
Sbjct: 118 SYGMHRVETS--CSQCGAHLGHIFDDGP 143
>gi|443244402|ref|YP_007377627.1| methionine sulfoxide reductase [Nonlabens dokdonensis DSW-6]
gi|442801801|gb|AGC77606.1| methionine sulfoxide reductase [Nonlabens dokdonensis DSW-6]
Length = 176
Score = 35.0 bits (79), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 22/31 (70%), Gaps = 2/31 (6%)
Query: 70 RTKIKCNNCGALLGYIYDDGPPAVDTPGQFH 100
RT++KCN CG+ LG+ ++DGP T G+ H
Sbjct: 127 RTELKCNTCGSHLGHEFNDGPKK--TTGKRH 155
>gi|187477575|ref|YP_785599.1| methionine sulfoxide reductase B [Bordetella avium 197N]
gi|115422161|emb|CAJ48685.1| peptide methionine sulfoxide reductase [Bordetella avium 197N]
Length = 131
Score = 35.0 bits (79), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 36/87 (41%), Gaps = 19/87 (21%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
IY C CGT L + + F AG F ID + R E++
Sbjct: 44 IYRCVGCGTPL-------FASDTKFDAGCGWPSYFEPIDPERVREERDTSH--------- 87
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGP 90
RT++ CN C + LG+++ DGP
Sbjct: 88 ---GMVRTEVLCNICDSHLGHVFPDGP 111
>gi|375011058|ref|YP_004988046.1| methionine-R-sulfoxide reductase [Owenweeksia hongkongensis DSM
17368]
gi|359346982|gb|AEV31401.1| methionine-R-sulfoxide reductase [Owenweeksia hongkongensis DSM
17368]
Length = 167
Score = 35.0 bits (79), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 19/87 (21%)
Query: 4 IYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFAMIDSTKFRLEKEDKIRPFFETLDY 63
IY C C T L + + A +P+ +K +++ EK+D
Sbjct: 76 IYKCAACDTPL-FESESKFDAHCGWPSFDKAISENSVV-------EKKD----------- 116
Query: 64 WGIQRKRTKIKCNNCGALLGYIYDDGP 90
+ RT+I C CG LG+++DDGP
Sbjct: 117 YSFGMVRTEILCGTCGGHLGHVFDDGP 143
>gi|145589155|ref|YP_001155752.1| methionine-R-sulfoxide reductase [Polynucleobacter necessarius
subsp. asymbioticus QLW-P1DMWA-1]
gi|145047561|gb|ABP34188.1| methionine-R-sulfoxide reductase [Polynucleobacter necessarius
subsp. asymbioticus QLW-P1DMWA-1]
Length = 134
Score = 35.0 bits (79), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 19/21 (90%)
Query: 70 RTKIKCNNCGALLGYIYDDGP 90
RT+++C++C A LG+++DDGP
Sbjct: 88 RTEVRCSHCDAHLGHVFDDGP 108
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.139 0.437
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,115,443,205
Number of Sequences: 23463169
Number of extensions: 85207576
Number of successful extensions: 183405
Number of sequences better than 100.0: 531
Number of HSP's better than 100.0 without gapping: 330
Number of HSP's successfully gapped in prelim test: 201
Number of HSP's that attempted gapping in prelim test: 182977
Number of HSP's gapped (non-prelim): 542
length of query: 126
length of database: 8,064,228,071
effective HSP length: 92
effective length of query: 34
effective length of database: 10,200,583,819
effective search space: 346819849846
effective search space used: 346819849846
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 71 (32.0 bits)