Query 033124
Match_columns 126
No_of_seqs 119 out of 1020
Neff 4.4
Searched_HMMs 13730
Date Mon Mar 25 16:34:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033124.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/033124hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1l1da_ b.88.1.3 (A:) C-termin 100.0 1.8E-39 1.3E-43 243.3 6.0 85 2-121 40-125 (144)
2 d1xm0a1 b.88.1.3 (A:1-143) Pep 100.0 8E-39 5.8E-43 239.6 6.1 83 2-121 39-122 (143)
3 d1x68a2 g.39.1.3 (A:37-70) Fou 74.8 0.23 1.7E-05 27.3 -0.4 15 68-82 16-30 (34)
4 d1pfta_ g.41.3.1 (A:) Transcri 70.5 2 0.00014 24.9 3.1 28 2-39 22-49 (50)
5 d1dl6a_ g.41.3.1 (A:) Transcri 51.8 4.2 0.00031 24.1 2.2 28 2-39 28-55 (58)
6 d1j2oa1 g.39.1.3 (A:1-30) Rhom 43.6 2.8 0.00021 22.3 0.4 9 6-14 5-13 (30)
7 d1rutx1 g.39.1.3 (X:19-48) LIM 38.3 4.5 0.00033 21.4 0.7 9 6-14 4-12 (30)
8 d1x6ma_ b.88.1.4 (A:) Glutathi 35.2 13 0.00097 26.5 3.1 44 41-90 73-116 (196)
9 d1twfl_ g.41.9.2 (L:) RBP12 su 34.6 9.2 0.00067 22.0 1.7 16 2-17 2-17 (46)
10 d1x61a2 g.39.1.3 (A:35-66) Thy 30.5 8.5 0.00062 20.5 1.0 9 6-14 1-9 (32)
11 d1vd4a_ g.41.3.1 (A:) Transcri 30.2 8.8 0.00064 23.1 1.1 14 1-14 36-49 (62)
12 d1dfxa2 g.41.5.2 (A:1-36) Desu 29.6 9.6 0.0007 20.9 1.1 12 3-14 5-16 (36)
13 d2cuqa1 g.39.1.3 (A:43-74) Fou 28.8 6 0.00044 21.2 0.1 18 6-26 1-18 (32)
14 d1vzia2 g.41.5.2 (A:1-37) Desu 28.3 10 0.00076 20.8 1.1 12 3-14 5-16 (37)
15 d2apob1 g.41.16.1 (B:403-457) 28.3 17 0.0013 21.4 2.2 24 6-29 18-41 (55)
16 d2dsxa1 g.41.5.1 (A:1-52) Rubr 27.5 15 0.0011 21.3 1.8 11 4-14 3-13 (52)
17 d1dxga_ g.41.5.2 (A:) Desulfor 27.0 11 0.00084 20.6 1.1 11 4-14 6-16 (36)
18 d1nnqa2 g.41.5.1 (A:135-171) R 25.9 14 0.0011 19.9 1.4 13 2-14 3-15 (37)
19 d1yuza2 g.41.5.1 (A:167-202) N 23.9 14 0.001 19.9 1.2 13 2-14 3-15 (36)
20 d1wiga2 g.39.1.3 (A:33-73) Act 22.7 12 0.0009 20.9 0.7 10 74-83 1-10 (41)
21 d1x6ea2 g.37.1.1 (A:41-66) Zin 22.5 9.1 0.00067 19.3 0.1 10 5-14 3-12 (26)
22 d1dx8a_ g.41.5.1 (A:) Rubredox 21.9 14 0.001 22.6 1.0 13 2-14 5-17 (70)
23 d1cv8a_ d.3.1.1 (A:) Staphopai 21.2 3.1 0.00023 30.1 -2.7 37 33-86 84-121 (173)
24 d2ey4e1 g.41.16.1 (E:4-55) Rib 20.3 22 0.0016 20.7 1.6 22 7-28 17-38 (52)
25 d1vqo11 g.41.8.2 (1:1-56) Ribo 20.2 14 0.0011 21.9 0.7 18 69-86 13-30 (56)
No 1
>d1l1da_ b.88.1.3 (A:) C-terminal MsrB domain of peptide methionine sulfoxide reductase PilB {Neisseria gonorrhoeae [TaxId: 485]}
Probab=100.00 E-value=1.8e-39 Score=243.30 Aligned_cols=85 Identities=24% Similarity=0.409 Sum_probs=80.1
Q ss_pred CcEEEecccccccCCCCCCCCCCCCccCCCCCcccccc-ccCCCCeEEeecCCcccccccccccCCCceEEEEecCccCC
Q 033124 2 ASIYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFA-MIDSTKFRLEKEDKIRPFFETLDYWGIQRKRTKIKCNNCGA 80 (126)
Q Consensus 2 ~G~Y~C~~Cg~~Lnlsss~~f~S~~Kf~sg~~GwpSF~-~i~~~~v~~~~d~~~~p~f~~~~s~g~~~~Rtev~C~~Cg~ 80 (126)
+|+|.|++||+|| |+|++||+|+| |||||+ +|++++|+..+|.++ +|.||||+|++||+
T Consensus 40 ~G~Y~C~~Cg~pL-------F~S~~KfdSg~-GWPSF~~~i~~~~v~~~~d~s~------------gm~R~Ev~C~~Cg~ 99 (144)
T d1l1da_ 40 PGIYVDVVSGEPL-------FSSADKYDSGC-GWPSFTRPIDAKSVTEHDDFSF------------NMRRTEVRSRAADS 99 (144)
T ss_dssp SEEEEETTTCCEE-------EEGGGEECCSS-SSCEESSCSSTTSEEEEEECCT------------TSCEEEEEETTTCC
T ss_pred cCceEecccccee-------eehhhcccCCc-cceeeccccccccccceecccc------------cccceeeEecCCCC
Confidence 7999999999999 99999999999 999999 999999999999997 78999999999999
Q ss_pred ccccccCCCCCCCCCCCCcCCCCCCCCCCCceeEeecccee
Q 033124 81 LLGYIYDDGPPAVDTPGQFHFGPSQVIPRYPRYRLKTKALR 121 (126)
Q Consensus 81 HLGhvF~Dgp~pt~~~~~~~~~~~~~~~~~~rY~i~~~AL~ 121 (126)
||||||+|||.|++ ++|||||++||+
T Consensus 100 HLGHVF~DGp~~~~---------------~~RyCiNs~sL~ 125 (144)
T d1l1da_ 100 HLGHVFPDGPRDKG---------------GLRYCINGASLK 125 (144)
T ss_dssp EEEEEESCSCGGGT---------------SCEEEECGGGEE
T ss_pred ccCcccCCCCCCCC---------------CCEeccceeeEE
Confidence 99999999997754 379999999997
No 2
>d1xm0a1 b.88.1.3 (A:1-143) Peptide methionine sulfoxide reductase MsrB {Bacillus subtilis [TaxId: 1423]}
Probab=100.00 E-value=8e-39 Score=239.63 Aligned_cols=83 Identities=24% Similarity=0.405 Sum_probs=76.4
Q ss_pred CcEEEecccccccCCCCCCCCCCCCccCCCCCcccccc-ccCCCCeEEeecCCcccccccccccCCCceEEEEecCccCC
Q 033124 2 ASIYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFA-MIDSTKFRLEKEDKIRPFFETLDYWGIQRKRTKIKCNNCGA 80 (126)
Q Consensus 2 ~G~Y~C~~Cg~~Lnlsss~~f~S~~Kf~sg~~GwpSF~-~i~~~~v~~~~d~~~~p~f~~~~s~g~~~~Rtev~C~~Cg~ 80 (126)
+|+|+|++|++|| |+|++||+|+| |||||+ +|++ .+....|.+. +|.||||+|++||+
T Consensus 39 ~G~Y~C~~C~~pL-------F~S~~KfdSg~-GWPSF~~~i~~-~v~~~~D~s~------------gm~R~Ev~C~~Cg~ 97 (143)
T d1xm0a1 39 EGLYVDIVSGKPL-------FTSKDKFDSQC-GWPSFTKPIEE-EVEEKLDTSH------------GMIRTEVRSRTADS 97 (143)
T ss_dssp SEEEEESSTTCEE-------EETTTCCCCCS-SSCCEEESCCC-SEEEECCCCT------------TCCCCEEEESSCTT
T ss_pred CceEEeccccchh-------hhhhhhhccCC-ccceeeccccc-ceEEEecCCC------------CccccceEecCCCC
Confidence 7999999999999 99999999999 999999 8865 4556778886 77999999999999
Q ss_pred ccccccCCCCCCCCCCCCcCCCCCCCCCCCceeEeecccee
Q 033124 81 LLGYIYDDGPPAVDTPGQFHFGPSQVIPRYPRYRLKTKALR 121 (126)
Q Consensus 81 HLGhvF~Dgp~pt~~~~~~~~~~~~~~~~~~rY~i~~~AL~ 121 (126)
||||||+|||+||+ +|||||++||+
T Consensus 98 HLGHVF~DGp~ptg----------------~RyCINs~sL~ 122 (143)
T d1xm0a1 98 HLGHVFNDGPGPNG----------------LRYCINSAALR 122 (143)
T ss_dssp CCCEEEESCSSSSC----------------EEEECCGGGEE
T ss_pred ccCccCCCCCCCCC----------------cEeeeeeeeEE
Confidence 99999999998876 89999999997
No 3
>d1x68a2 g.39.1.3 (A:37-70) Four and a half LIM domains protein 5, FHL-5 {Human (Homo sapiens) [TaxId: 9606]}
Probab=74.80 E-value=0.23 Score=27.34 Aligned_cols=15 Identities=27% Similarity=0.760 Sum_probs=12.3
Q ss_pred ceEEEEecCccCCcc
Q 033124 68 RKRTKIKCNNCGALL 82 (126)
Q Consensus 68 ~~Rtev~C~~Cg~HL 82 (126)
.+|.|++|++||+-.
T Consensus 16 tq~~~i~c~~cgsg~ 30 (34)
T d1x68a2 16 TQNKEIFCQKCGSGM 30 (34)
T ss_dssp EETTEEEETTTTCCC
T ss_pred eccCcEEehhcCCCc
Confidence 367899999999854
No 4
>d1pfta_ g.41.3.1 (A:) Transcription initiation factor TFIIB, N-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=70.46 E-value=2 Score=24.85 Aligned_cols=28 Identities=18% Similarity=0.336 Sum_probs=21.2
Q ss_pred CcEEEecccccccCCCCCCCCCCCCccCCCCCcccccc
Q 033124 2 ASIYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFA 39 (126)
Q Consensus 2 ~G~Y~C~~Cg~~Lnlsss~~f~S~~Kf~sg~~GwpSF~ 39 (126)
.|.+.|..||.-| .+.-.|.|- =|-+|.
T Consensus 22 ~Ge~vC~~CG~Vi---------ee~~iD~gp-EWR~f~ 49 (50)
T d1pfta_ 22 RGEIVCAKCGYVI---------EENIIDMGP-EWRAFD 49 (50)
T ss_dssp TTEEEESSSCCBC---------CCCCCCCCS-SSSCCC
T ss_pred CCeEecccCCcEe---------ccccccCCC-cccccC
Confidence 5899999999987 444556665 787774
No 5
>d1dl6a_ g.41.3.1 (A:) Transcription initiation factor TFIIB, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=51.76 E-value=4.2 Score=24.09 Aligned_cols=28 Identities=25% Similarity=0.433 Sum_probs=19.8
Q ss_pred CcEEEecccccccCCCCCCCCCCCCccCCCCCcccccc
Q 033124 2 ASIYSCKECGTNLNLNTSHLYPATVYFPAGNKGTLSFA 39 (126)
Q Consensus 2 ~G~Y~C~~Cg~~Lnlsss~~f~S~~Kf~sg~~GwpSF~ 39 (126)
.|.+.|..||.-| .+.--+.+- =|-+|.
T Consensus 28 ~Ge~vC~~CG~Vl---------ee~~ID~g~-EWR~f~ 55 (58)
T d1dl6a_ 28 AGDMICPECGLVV---------GDRVIDVGS-EWRTFS 55 (58)
T ss_dssp SCCEECTTTCCEE---------CCSCCCCCC-SCCCSC
T ss_pred CCcEecccCCCEe---------ccccccCCC-cccccC
Confidence 5889999999887 334455555 677774
No 6
>d1j2oa1 g.39.1.3 (A:1-30) Rhombotin-2 (Lmo2) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=43.58 E-value=2.8 Score=22.31 Aligned_cols=9 Identities=33% Similarity=1.043 Sum_probs=8.1
Q ss_pred Eeccccccc
Q 033124 6 SCKECGTNL 14 (126)
Q Consensus 6 ~C~~Cg~~L 14 (126)
+|++|+.++
T Consensus 5 ~CaGC~~~I 13 (30)
T d1j2oa1 5 TCGGCQQNI 13 (30)
T ss_dssp CBSSSCSCB
T ss_pred ccCCCCCcc
Confidence 699999998
No 7
>d1rutx1 g.39.1.3 (X:19-48) LIM only 4 (Lmo4) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=38.26 E-value=4.5 Score=21.44 Aligned_cols=9 Identities=33% Similarity=1.136 Sum_probs=7.8
Q ss_pred Eeccccccc
Q 033124 6 SCKECGTNL 14 (126)
Q Consensus 6 ~C~~Cg~~L 14 (126)
.|++||.++
T Consensus 4 ~CaGC~~~I 12 (30)
T d1rutx1 4 RCAGCGGKI 12 (30)
T ss_dssp BBTTTCCBC
T ss_pred ccCCCCCcc
Confidence 589999997
No 8
>d1x6ma_ b.88.1.4 (A:) Glutathione-dependent formaldehyde-activating enzyme, Gfa {Paracoccus denitrificans [TaxId: 266]}
Probab=35.19 E-value=13 Score=26.52 Aligned_cols=44 Identities=9% Similarity=0.241 Sum_probs=24.5
Q ss_pred cCCCCeEEeecCCcccccccccccCCCceEEEEecCccCCccccccCCCC
Q 033124 41 IDSTKFRLEKEDKIRPFFETLDYWGIQRKRTKIKCNNCGALLGYIYDDGP 90 (126)
Q Consensus 41 i~~~~v~~~~d~~~~p~f~~~~s~g~~~~Rtev~C~~Cg~HLGhvF~Dgp 90 (126)
+..++|+...+... +. .|.......+..|++||.||=..+++.+
T Consensus 73 v~~d~~~vt~g~~~---l~---~~~ss~~i~R~FC~~CGs~lf~r~e~~~ 116 (196)
T d1x6ma_ 73 VGRDALEVLEGAEK---LE---IVNAEAPIQRHRCRDCGVHMYGRIENRD 116 (196)
T ss_dssp EEGGGEEEEECGGG---EE---ESCTTSSEEEEEETTTCCEEEEEECCTT
T ss_pred EeccceEEccCCcc---ce---EEeccCceeeeccCCCCCcEEEeecCCC
Confidence 45566776544321 11 2222334567789999999854444433
No 9
>d1twfl_ g.41.9.2 (L:) RBP12 subunit of RNA polymerase II {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=34.63 E-value=9.2 Score=21.97 Aligned_cols=16 Identities=38% Similarity=0.856 Sum_probs=12.3
Q ss_pred CcEEEecccccccCCC
Q 033124 2 ASIYSCKECGTNLNLN 17 (126)
Q Consensus 2 ~G~Y~C~~Cg~~Lnls 17 (126)
+-.|.|+.||.+..|.
T Consensus 2 ~v~YiCgeCg~~~~l~ 17 (46)
T d1twfl_ 2 TLKYICAECSSKLSLS 17 (46)
T ss_dssp CCCEECSSSCCEECCC
T ss_pred ceEEEcccCCCceEeC
Confidence 4579999999987443
No 10
>d1x61a2 g.39.1.3 (A:35-66) Thyroid receptor interacting protein 6, TRIP6 {Human (Homo sapiens) [TaxId: 9606]}
Probab=30.50 E-value=8.5 Score=20.52 Aligned_cols=9 Identities=33% Similarity=0.973 Sum_probs=7.3
Q ss_pred Eeccccccc
Q 033124 6 SCKECGTNL 14 (126)
Q Consensus 6 ~C~~Cg~~L 14 (126)
+|..|+..|
T Consensus 1 vC~tC~~kL 9 (32)
T d1x61a2 1 VCSTCRAQL 9 (32)
T ss_dssp BCSSSCCBC
T ss_pred CeeEeCcee
Confidence 478888888
No 11
>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=30.16 E-value=8.8 Score=23.10 Aligned_cols=14 Identities=29% Similarity=0.776 Sum_probs=12.1
Q ss_pred CCcEEEeccccccc
Q 033124 1 MASIYSCKECGTNL 14 (126)
Q Consensus 1 ~~G~Y~C~~Cg~~L 14 (126)
+.|.+.|..|+.+|
T Consensus 36 ~~~~F~C~~C~~el 49 (62)
T d1vd4a_ 36 MTGTFRCTFCHTEV 49 (62)
T ss_dssp TTTEEBCSSSCCBC
T ss_pred CCCeEEecCCCCEE
Confidence 36899999999998
No 12
>d1dfxa2 g.41.5.2 (A:1-36) Desulfoferrodoxin N-terminal domain {Desulfovibrio desulfuricans [TaxId: 876]}
Probab=29.62 E-value=9.6 Score=20.88 Aligned_cols=12 Identities=33% Similarity=1.132 Sum_probs=10.1
Q ss_pred cEEEeccccccc
Q 033124 3 SIYSCKECGTNL 14 (126)
Q Consensus 3 G~Y~C~~Cg~~L 14 (126)
-+|.|..||+-.
T Consensus 5 evYkC~~CGNiV 16 (36)
T d1dfxa2 5 EVYKCTHCGNIV 16 (36)
T ss_dssp CEEECTTTCCEE
T ss_pred cEEEecccCcEE
Confidence 489999999865
No 13
>d2cuqa1 g.39.1.3 (A:43-74) Four and a half LIM domains 3, FHL3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=28.76 E-value=6 Score=21.23 Aligned_cols=18 Identities=22% Similarity=0.551 Sum_probs=11.5
Q ss_pred EecccccccCCCCCCCCCCCC
Q 033124 6 SCKECGTNLNLNTSHLYPATV 26 (126)
Q Consensus 6 ~C~~Cg~~Lnlsss~~f~S~~ 26 (126)
+|..|..+| +-.||+|.+
T Consensus 1 vCt~Ck~~L---aGqrFTSrd 18 (32)
T d2cuqa1 1 VCTGCQTPL---AGQQFTSRD 18 (32)
T ss_dssp BCSSSCCBC---TTCCEEECS
T ss_pred CccccCccc---cCCccccCC
Confidence 478888888 445555543
No 14
>d1vzia2 g.41.5.2 (A:1-37) Desulfoferrodoxin N-terminal domain {Desulfoarculus baarsii (Desulfovibrio baarsii) [TaxId: 887]}
Probab=28.29 E-value=10 Score=20.84 Aligned_cols=12 Identities=33% Similarity=1.099 Sum_probs=9.7
Q ss_pred cEEEeccccccc
Q 033124 3 SIYSCKECGTNL 14 (126)
Q Consensus 3 G~Y~C~~Cg~~L 14 (126)
-+|.|..||+-+
T Consensus 5 evYkC~~CGNiV 16 (37)
T d1vzia2 5 QVYKCEVCGNIV 16 (37)
T ss_dssp CEEECTTTCCEE
T ss_pred cEEEecccCcEE
Confidence 479999999764
No 15
>d2apob1 g.41.16.1 (B:403-457) Ribosome biogenesis protein Nop10 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=28.27 E-value=17 Score=21.39 Aligned_cols=24 Identities=13% Similarity=0.367 Sum_probs=17.5
Q ss_pred EecccccccCCCCCCCCCCCCccC
Q 033124 6 SCKECGTNLNLNTSHLYPATVYFP 29 (126)
Q Consensus 6 ~C~~Cg~~Lnlsss~~f~S~~Kf~ 29 (126)
.|..||.+..-.--.||+.+++|.
T Consensus 18 ~CP~CG~~t~~a~P~rfSPeDky~ 41 (55)
T d2apob1 18 ICPKCGEKTVIPKPPKFSLEDRWG 41 (55)
T ss_dssp BCSSSCSBCBCCCCCCCCTTCTTH
T ss_pred cCcCCCCccCccCCCCCCCCcchH
Confidence 377888888777777787777663
No 16
>d2dsxa1 g.41.5.1 (A:1-52) Rubredoxin {Desulfovibrio gigas [TaxId: 879]}
Probab=27.53 E-value=15 Score=21.26 Aligned_cols=11 Identities=45% Similarity=1.138 Sum_probs=9.6
Q ss_pred EEEeccccccc
Q 033124 4 IYSCKECGTNL 14 (126)
Q Consensus 4 ~Y~C~~Cg~~L 14 (126)
.|.|..||+.-
T Consensus 3 ~y~C~~CgyiY 13 (52)
T d2dsxa1 3 IYVCTVCGYEY 13 (52)
T ss_dssp CEEETTTCCEE
T ss_pred eEEeCCCCeEE
Confidence 69999999874
No 17
>d1dxga_ g.41.5.2 (A:) Desulforedoxin {Desulfovibrio gigas [TaxId: 879]}
Probab=26.96 E-value=11 Score=20.56 Aligned_cols=11 Identities=36% Similarity=1.168 Sum_probs=9.2
Q ss_pred EEEeccccccc
Q 033124 4 IYSCKECGTNL 14 (126)
Q Consensus 4 ~Y~C~~Cg~~L 14 (126)
+|.|..||+-+
T Consensus 6 vYkC~~CGNiV 16 (36)
T d1dxga_ 6 VYKCELCGQVV 16 (36)
T ss_dssp EEECTTTCCEE
T ss_pred EEEeccCCcEE
Confidence 79999999764
No 18
>d1nnqa2 g.41.5.1 (A:135-171) Rubrerythrin, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=25.88 E-value=14 Score=19.93 Aligned_cols=13 Identities=31% Similarity=0.833 Sum_probs=11.0
Q ss_pred CcEEEeccccccc
Q 033124 2 ASIYSCKECGTNL 14 (126)
Q Consensus 2 ~G~Y~C~~Cg~~L 14 (126)
.-+|.|..||+-.
T Consensus 3 ~~~~~C~vCG~i~ 15 (37)
T d1nnqa2 3 KKVYICPICGYTA 15 (37)
T ss_dssp SCEEECTTTCCEE
T ss_pred CcEEECCCCCCEe
Confidence 4689999999986
No 19
>d1yuza2 g.41.5.1 (A:167-202) Nigerythrin, C-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}
Probab=23.86 E-value=14 Score=19.87 Aligned_cols=13 Identities=23% Similarity=0.416 Sum_probs=10.6
Q ss_pred CcEEEeccccccc
Q 033124 2 ASIYSCKECGTNL 14 (126)
Q Consensus 2 ~G~Y~C~~Cg~~L 14 (126)
.-+|.|..||+-.
T Consensus 3 ~~~~vC~vCGyi~ 15 (36)
T d1yuza2 3 DKFHLCPICGYIH 15 (36)
T ss_dssp CCEEECSSSCCEE
T ss_pred CCEEECCCCCCEe
Confidence 3579999999886
No 20
>d1wiga2 g.39.1.3 (A:33-73) Actin-binding LIM protein 2, abLIM2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.75 E-value=12 Score=20.93 Aligned_cols=10 Identities=30% Similarity=1.022 Sum_probs=8.1
Q ss_pred ecCccCCccc
Q 033124 74 KCNNCGALLG 83 (126)
Q Consensus 74 ~C~~Cg~HLG 83 (126)
+|.+|+.+.|
T Consensus 1 ~C~rC~~mF~ 10 (41)
T d1wiga2 1 LCVRCGQMFA 10 (41)
T ss_dssp CCSSSCCCCC
T ss_pred Ccchhhcccc
Confidence 6999988765
No 21
>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.49 E-value=9.1 Score=19.31 Aligned_cols=10 Identities=50% Similarity=1.358 Sum_probs=9.0
Q ss_pred EEeccccccc
Q 033124 5 YSCKECGTNL 14 (126)
Q Consensus 5 Y~C~~Cg~~L 14 (126)
|.|..||...
T Consensus 3 y~C~eCgK~F 12 (26)
T d1x6ea2 3 YKCLECGKAF 12 (26)
T ss_dssp EECSSSCCEE
T ss_pred ccCCCCcCee
Confidence 8999999985
No 22
>d1dx8a_ g.41.5.1 (A:) Rubredoxin {Guillardia theta [TaxId: 55529]}
Probab=21.86 E-value=14 Score=22.65 Aligned_cols=13 Identities=31% Similarity=0.830 Sum_probs=11.1
Q ss_pred CcEEEeccccccc
Q 033124 2 ASIYSCKECGTNL 14 (126)
Q Consensus 2 ~G~Y~C~~Cg~~L 14 (126)
.|.|.|..||+--
T Consensus 5 ~~ky~C~~CgyiY 17 (70)
T d1dx8a_ 5 EGKYECEACGYIY 17 (70)
T ss_dssp SSCEEETTTCCEE
T ss_pred CCeEEcCCCCeEE
Confidence 5889999999873
No 23
>d1cv8a_ d.3.1.1 (A:) Staphopain StpA {Staphylococcus aureus [TaxId: 1280]}
Probab=21.18 E-value=3.1 Score=30.05 Aligned_cols=37 Identities=16% Similarity=0.234 Sum_probs=22.2
Q ss_pred CccccccccCCCCeEEeecCCcccccccccccCCCceEEEEecCccCC-cccccc
Q 033124 33 KGTLSFAMIDSTKFRLEKEDKIRPFFETLDYWGIQRKRTKIKCNNCGA-LLGYIY 86 (126)
Q Consensus 33 ~GwpSF~~i~~~~v~~~~d~~~~p~f~~~~s~g~~~~Rtev~C~~Cg~-HLGhvF 86 (126)
.||||+..||. +.++++-++.+. .|+| .|.+ |+||+|
T Consensus 84 n~m~sy~~vd~----lt~~Nkgi~il~---------~~ve----s~~g~h~~hAm 121 (173)
T d1cv8a_ 84 NRMTTYNEVDN----LTKNNKGIAILG---------SRVE----SRNGMHAGHAM 121 (173)
T ss_dssp SSCCCHHHHHH----HHHTTCCEEEEE---------EESS----CBTTBCCEEEE
T ss_pred cCCCchhhHHH----HhhccCCcEeee---------eccc----CCCCCccceeE
Confidence 38999987752 344555433211 2333 6666 999986
No 24
>d2ey4e1 g.41.16.1 (E:4-55) Ribosome biogenesis protein Nop10 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=20.29 E-value=22 Score=20.69 Aligned_cols=22 Identities=14% Similarity=0.462 Sum_probs=15.2
Q ss_pred ecccccccCCCCCCCCCCCCcc
Q 033124 7 CKECGTNLNLNTSHLYPATVYF 28 (126)
Q Consensus 7 C~~Cg~~Lnlsss~~f~S~~Kf 28 (126)
|..||.+..-.--.||+.++||
T Consensus 17 CP~CG~~t~~a~ParfSPeDky 38 (52)
T d2ey4e1 17 CPVCGEKTKVAHPPRFSPEDPY 38 (52)
T ss_dssp CTTTCCBCEESSCCCCCTTCTT
T ss_pred CcCCCCcccccCCCCCCCCccc
Confidence 6677777766666677777665
No 25
>d1vqo11 g.41.8.2 (1:1-56) Ribosomal protein L37e {Archaeon Haloarcula marismortui [TaxId: 2238]}
Probab=20.16 E-value=14 Score=21.91 Aligned_cols=18 Identities=28% Similarity=0.421 Sum_probs=14.6
Q ss_pred eEEEEecCccCCcccccc
Q 033124 69 KRTKIKCNNCGALLGYIY 86 (126)
Q Consensus 69 ~Rtev~C~~Cg~HLGhvF 86 (126)
.+|-++|++||.+-=|+=
T Consensus 13 ~ktH~~CrRCGr~syH~q 30 (56)
T d1vqo11 13 TTTHTKCRRCGEKSYHTK 30 (56)
T ss_dssp CCCEEECTTTCSEEEETT
T ss_pred CCccchhhccCchhhhhc
Confidence 458899999999877773
Done!