Query         033129
Match_columns 126
No_of_seqs    120 out of 1012
Neff          5.5 
Searched_HMMs 29240
Date          Mon Mar 25 16:40:24 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033129.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/033129hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 3r8n_N 30S ribosomal protein S 100.0 1.7E-44 5.9E-49  254.1   2.2   96   31-126     5-100 (100)
  2 3bbn_N Ribosomal protein S14;  100.0 1.8E-43   6E-48  249.0  -5.8   99   27-126     1-100 (100)
  3 2vqe_N 30S ribosomal protein S  99.9 3.3E-26 1.1E-30  148.2   4.6   53   74-126     9-61  (61)
  4 2xzm_N RPS29E; ribosome, trans  99.3 4.8E-13 1.6E-17   84.7   3.5   35   81-115    12-48  (55)
  5 3j20_P 30S ribosomal protein S  99.1 5.6E-11 1.9E-15   75.4   3.3   35   81-115    13-49  (56)
  6 3iz6_N 40S ribosomal protein S  99.0 7.1E-11 2.4E-15   74.9   1.8   34   82-115    14-49  (56)
  7 3u5c_d S36, YS29, 40S ribosoma  99.0 1.4E-10 4.8E-15   73.6   1.7   34   82-115    14-49  (56)
  8 2rig_A Interferon-gamma; cytok  74.8      14 0.00049   26.8   7.3   87   13-99     45-144 (144)
  9 3tuf_A Stage III sporulation p  60.4      19 0.00066   27.3   5.7   45   26-77     84-128 (197)
 10 4e17_B Catenin alpha-1; four h  35.8      30   0.001   19.9   2.5   30   27-56      3-32  (40)
 11 1y6u_A XIS, excisionase from t  29.6      29   0.001   21.6   2.0   22   98-119    22-44  (70)
 12 2og0_A Excisionase; protein-DN  28.7      29   0.001   20.6   1.8   20  103-122    15-36  (52)
 13 1z4h_A TORI, TOR inhibition pr  28.7      11 0.00037   22.8  -0.2   26   95-120    13-38  (66)
 14 2kfs_A Conserved hypothetical   25.7      38  0.0013   24.5   2.2   26   98-123    37-62  (148)
 15 1pm6_A Excisionase; antiparall  20.0      49  0.0017   21.0   1.7   20  103-122    15-36  (72)

No 1  
>3r8n_N 30S ribosomal protein S14; protein biosynthesis, RNA, tRNA, transfer RNA, 16S ribosomal subunit, RRF; 3.00A {Escherichia coli} PDB: 1p6g_N 1p87_N 2aw7_N 2avy_N 2i2u_N 2i2p_N* 2qan_N* 2qb9_N* 2qbb_N* 2qbd_N 2qbf_N 2qbh_N* 2qbj_N* 2qou_N* 2qow_N* 2qoy_N* 2qp0_N* 2vho_N 2vhp_N 2ykr_N ...
Probab=100.00  E-value=1.7e-44  Score=254.11  Aligned_cols=96  Identities=44%  Similarity=0.580  Sum_probs=90.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCCCCcccccccccccCCcchhhcccCccHHHHH
Q 033129           31 RNIEDHKRRLLATKFELKRKLYKSLYRDVNLPTEVREKYLCKLARLPRNSSFTRLRNRCIFTGRSRAVYEKFRMSRIVFR  110 (126)
Q Consensus        31 ~~~rD~krR~l~~k~e~~R~~LK~i~~n~~lp~~~r~~a~~~L~~LPrnSs~tRirNRCv~TGR~Rgv~r~f~LSRi~fR  110 (126)
                      .|.||++|++++++||.+|.+||++++|+++|.++|++|+.+|++||+||||||++|||++||||||||++||||||+||
T Consensus         5 ~i~Rd~kRr~lv~ky~~kR~~LK~i~~n~~l~~~~R~~a~~kL~~LPRnSs~~r~~nRC~~tGR~rg~~r~f~lsR~~fR   84 (100)
T 3r8n_N            5 MKAREVKRVALADKYFAKRAELKAIISDVNASDEDRWNAVLKLQTLPRDSSPSRQRNRCRQTGRPHGFLRKFGLSRIKVR   84 (100)
T ss_dssp             HHHHHHHHHHHHHHSTTTGGGTTTTTSSSCC----CCSHHHHTCCSCSTTSGGGCCCCBTTTBCSSSCCGGGTSCHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcccccchhhhcccccCCCCCceecCCCCchHHHHH
Confidence            46699999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhhhcCCCCCcccccC
Q 033129          111 SLANQGMLMGVKKASW  126 (126)
Q Consensus       111 ~la~~G~lpGv~KaSW  126 (126)
                      |+|+.|+||||+||||
T Consensus        85 e~a~~g~lpGv~KasW  100 (100)
T 3r8n_N           85 EAAMRGEIPGLKKASW  100 (100)
T ss_dssp             HHHHHSCSTTEEECCC
T ss_pred             HHHHcCCCCCeeeccC
Confidence            9999999999999999


No 2  
>3bbn_N Ribosomal protein S14; small ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea}
Probab=100.00  E-value=1.8e-43  Score=248.99  Aligned_cols=99  Identities=33%  Similarity=0.517  Sum_probs=95.3

Q ss_pred             HHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCCCCcccccccccccCCcchhhcccCcc
Q 033129           27 VSEKR-NIEDHKRRLLATKFELKRKLYKSLYRDVNLPTEVREKYLCKLARLPRNSSFTRLRNRCIFTGRSRAVYEKFRMS  105 (126)
Q Consensus        27 m~~~~-~~rD~krR~l~~k~e~~R~~LK~i~~n~~lp~~~r~~a~~~L~~LPrnSs~tRirNRCv~TGR~Rgv~r~f~LS  105 (126)
                      ||+++ +.||++||+++++||.+|.+||++++|++ |.+++++|+.+|++||+||++||++|||++||||||||++||||
T Consensus         1 Makks~i~Rd~kRr~l~~ky~~kR~~LK~~~~~~~-~~~~r~~a~~kL~~lPRns~~~r~~nRC~~tGR~rg~~r~fgls   79 (100)
T 3bbn_N            1 MARKSLIQREKKRRNLEQKYHLIRRSSKQEIRKVT-SLSDKWEIHGKLQSPPRNSAPARLHRRCFLTGRPRANIRDFGLS   79 (100)
T ss_dssp             -CCTTHHHHHHTTTSSTTTTSSSTTTTTTTTSSCC-SSSCCCSHHHHSCCSCSSCCGGGCCCCCSSSCCSSSBCTTTCSB
T ss_pred             CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC-CHHHHHHHHHHHHhCCcccccccccccccCCCCCceeecccCcH
Confidence            67775 45999999999999999999999999999 99999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhhcCCCCCcccccC
Q 033129          106 RIVFRSLANQGMLMGVKKASW  126 (126)
Q Consensus       106 Ri~fR~la~~G~lpGv~KaSW  126 (126)
                      |++|||+|+.|+||||+||||
T Consensus        80 R~~fRe~a~~g~lpGv~KssW  100 (100)
T 3bbn_N           80 GHILREMVHTCLLPGATRSSW  100 (100)
T ss_dssp             TTHHHHHHTTTCSSSCEECCC
T ss_pred             HHHHHHHHHcCCCCCeeeccC
Confidence            999999999999999999999


No 3  
>2vqe_N 30S ribosomal protein S14 type Z; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: g.39.1.7 PDB: 1gix_Q* 1hnw_N* 1hnx_N* 1hnz_N* 1hr0_N 1ibk_N* 1ibl_N* 1ibm_N 1jgo_Q* 1jgp_Q* 1jgq_Q* 1ml5_Q* 1xmo_N* 1xmq_N* 1xnq_N* 1xnr_N* 1yl4_Q 2b64_N* 2b9m_N* 2b9o_N* ...
Probab=99.92  E-value=3.3e-26  Score=148.16  Aligned_cols=53  Identities=42%  Similarity=0.684  Sum_probs=51.2

Q ss_pred             hcCCCCCCcccccccccccCCcchhhcccCccHHHHHHhhhcCCCCCcccccC
Q 033129           74 ARLPRNSSFTRLRNRCIFTGRSRAVYEKFRMSRIVFRSLANQGMLMGVKKASW  126 (126)
Q Consensus        74 ~~LPrnSs~tRirNRCv~TGR~Rgv~r~f~LSRi~fR~la~~G~lpGv~KaSW  126 (126)
                      ...++++++++++|||.+|||||||+|+|||||++|||+|+.|+||||+||||
T Consensus         9 k~~~~~~~~~r~~nRC~~~GR~rg~iRkfglcR~~FRe~A~~g~lpGv~KasW   61 (61)
T 2vqe_N            9 KAKRTPKFKVRAYTRCVRCGRARSVYRFFGLCRICLRELAHKGQLPGVRKASW   61 (61)
T ss_dssp             GCCSCCSSGGGCCCCCTTTCCCTTCCTTTSSCHHHHHHHHHHTCSSSCEECCC
T ss_pred             HhccCCCCCCCCceeeecCCCCceeeccCceeHHHHHHHHhCCccCCeEeeeC
Confidence            35788999999999999999999999999999999999999999999999999


No 4  
>2xzm_N RPS29E; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_N
Probab=99.34  E-value=4.8e-13  Score=84.71  Aligned_cols=35  Identities=20%  Similarity=0.435  Sum_probs=33.3

Q ss_pred             CcccccccccccCCcchhhcccC--ccHHHHHHhhhc
Q 033129           81 SFTRLRNRCIFTGRSRAVYEKFR--MSRIVFRSLANQ  115 (126)
Q Consensus        81 s~tRirNRCv~TGR~Rgv~r~f~--LSRi~fR~la~~  115 (126)
                      .+++++|||.+||||+|++|+||  |||++|||+|+.
T Consensus        12 ~~~r~~nrC~~cGr~rg~iRkfgl~lcR~cFRe~A~~   48 (55)
T 2xzm_N           12 NYGKDSKECRVCGARQGLITKYEMMTCRRCFREQAPH   48 (55)
T ss_dssp             TSSGGGCCCTTTCCSSTTCCCSSSCCCHHHHHHHHHH
T ss_pred             CCCCCceEeecCCCCcchHHHhCCchhhHHHHHHHHH
Confidence            47999999999999999999999  999999999985


No 5  
>3j20_P 30S ribosomal protein S14P type Z; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=99.08  E-value=5.6e-11  Score=75.41  Aligned_cols=35  Identities=26%  Similarity=0.431  Sum_probs=32.6

Q ss_pred             CcccccccccccCCcchhhcccCc--cHHHHHHhhhc
Q 033129           81 SFTRLRNRCIFTGRSRAVYEKFRM--SRIVFRSLANQ  115 (126)
Q Consensus        81 s~tRirNRCv~TGR~Rgv~r~f~L--SRi~fR~la~~  115 (126)
                      ...+-.|||.+||||+|++|+|||  ||++|||+|+.
T Consensus        13 ~~grg~~rC~vcGr~~g~iRkfGL~~cR~cfRe~A~~   49 (56)
T 3j20_P           13 KFGKGARRCIRCGQYGPIIRIQGLMLCRHCFREVAPK   49 (56)
T ss_dssp             SSSSTTCCCSSSCCSSSCCCTTTCCCCHHHHHHHHHH
T ss_pred             ccCCCceEeecCCCCcccccccCChHHHHHHHHHHHh
Confidence            467889999999999999999999  99999999975


No 6  
>3iz6_N 40S ribosomal protein S29 (S14P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 2zkq_n
Probab=99.02  E-value=7.1e-11  Score=74.92  Aligned_cols=34  Identities=26%  Similarity=0.437  Sum_probs=31.0

Q ss_pred             cccccccccccCCcchhhcccCc--cHHHHHHhhhc
Q 033129           82 FTRLRNRCIFTGRSRAVYEKFRM--SRIVFRSLANQ  115 (126)
Q Consensus        82 ~tRirNRCv~TGR~Rgv~r~f~L--SRi~fR~la~~  115 (126)
                      .-+-.|||.+||||+|++|+|||  ||++|||+|+.
T Consensus        14 ~G~g~~rC~vcGr~~g~iRkfGL~~cR~cfRe~A~~   49 (56)
T 3iz6_N           14 YGAGSRVCRVCGNSHGLIRKYGLMCCRQCFRSDAKD   49 (56)
T ss_dssp             CCCCCCCCSSCCCSCCCTTTTSCTTHHHHHHTTCCS
T ss_pred             cCCCcceeecCCCCcccccccCCcHHHHHHHHHHHh
Confidence            34568999999999999999999  99999999975


No 7  
>3u5c_d S36, YS29, 40S ribosomal protein S29-A; translation, ribosome, ribosomal, ribosomal R ribosomal protein, eukaryotic ribosome, RNA-protein C; 3.00A {Saccharomyces cerevisiae} PDB: 3izb_N 3o30_S 3o2z_S 3u5g_d 3jyv_N* 1s1h_N
Probab=98.97  E-value=1.4e-10  Score=73.58  Aligned_cols=34  Identities=21%  Similarity=0.432  Sum_probs=31.2

Q ss_pred             cccccccccccCCcchhhcccC--ccHHHHHHhhhc
Q 033129           82 FTRLRNRCIFTGRSRAVYEKFR--MSRIVFRSLANQ  115 (126)
Q Consensus        82 ~tRirNRCv~TGR~Rgv~r~f~--LSRi~fR~la~~  115 (126)
                      ..+-.|||.+||||+|++|+||  |||++|||+|+.
T Consensus        14 ~G~gs~rC~vcGr~~g~iRkfGl~lcR~cfRe~A~~   49 (56)
T 3u5c_d           14 YGKGSRQCRVCSSHTGLIRKYGLNICRQCFREKAND   49 (56)
T ss_dssp             SSGGGCCCTTTCCCSSEECGGGCCEEHHHHHHHHHH
T ss_pred             cCCCcceeecCCCCcccccccCcchhHHHHHHHHHh
Confidence            4566899999999999999999  999999999975


No 8  
>2rig_A Interferon-gamma; cytokine; 2.30A {Oryctolagus cuniculus} SCOP: a.26.1.3
Probab=74.84  E-value=14  Score=26.83  Aligned_cols=87  Identities=24%  Similarity=0.246  Sum_probs=58.5

Q ss_pred             hhhhhhHHHHHhH-----H-HHHH--HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHH----hcCCCCC
Q 033129           13 ATSQCMNFWRKMS-----T-VSEK--RNIEDHKRRLLATKFELKRKLYKSLYRDVNLPTEVREKYLCKL----ARLPRNS   80 (126)
Q Consensus        13 ~~~~~~~~~~~~~-----~-m~~~--~~~rD~krR~l~~k~e~~R~~LK~i~~n~~lp~~~r~~a~~~L----~~LPrnS   80 (126)
                      +.+|.+.++.|+-     + .++.  ..+++.-....|.....+..-+..+.+=+--.+.++-+|..+|    +.|-..+
T Consensus        45 i~SqIvs~Y~klF~~m~~~q~iq~s~~~Ik~~L~~~~f~~~~~kl~d~~~L~~i~vnD~~VQrKAi~EL~~V~~~lS~~~  124 (144)
T 2rig_A           45 IQSQIVSFYFKLFDNLKDHEVIKKSMESIKEDIFVKFFNSNLTKMDDFQNLTRISVDDRLVQRKAVSELSNVLNFLSPKS  124 (144)
T ss_pred             HHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHhCccc
Confidence            3467888888872     1 2222  3556666777777778888888887776666777776776665    3333333


Q ss_pred             C-cccccccccccCCcchhh
Q 033129           81 S-FTRLRNRCIFTGRSRAVY   99 (126)
Q Consensus        81 s-~tRirNRCv~TGR~Rgv~   99 (126)
                      + .-|-|.+|...||.++.|
T Consensus       125 ~~rKrkrsq~~f~g~~~s~~  144 (144)
T 2rig_A          125 NLKKRKRSQTLFRGRRASKY  144 (144)
T ss_pred             hhhHHHHhhhcccccccccC
Confidence            3 467789999999987543


No 9  
>3tuf_A Stage III sporulation protein AH; intercellular signalling, intercellular channel, sporulation engulfment and signalling, intercellular space; 2.26A {Bacillus subtilis} PDB: 3uz0_A
Probab=60.44  E-value=19  Score=27.34  Aligned_cols=45  Identities=9%  Similarity=0.025  Sum_probs=37.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhcCC
Q 033129           26 TVSEKRNIEDHKRRLLATKFELKRKLYKSLYRDVNLPTEVREKYLCKLARLP   77 (126)
Q Consensus        26 ~m~~~~~~rD~krR~l~~k~e~~R~~LK~i~~n~~lp~~~r~~a~~~L~~LP   77 (126)
                      +++..++.||..|-+...       .|+.|+.|.+++.+.+..|+.+|..|-
T Consensus        84 yFae~RL~REq~Rsk~~E-------~L~eII~n~n~S~eeK~eA~~ql~eLt  128 (197)
T 3tuf_A           84 LFTTYRLDLEDARSKERE-------ELNAIVSSDDATAKEKSEAYDKMTALS  128 (197)
T ss_dssp             HHHHHHHHHHHHHHHHHH-------HHHHHHTCTTSCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHH-------HHHHHHcCCCCCHHHHHHHHHHHHHHH
Confidence            466788999988876654       789999999999999999998886653


No 10 
>4e17_B Catenin alpha-1; four helix bundle, cell adhesion; 2.30A {Mus musculus}
Probab=35.83  E-value=30  Score=19.95  Aligned_cols=30  Identities=13%  Similarity=0.307  Sum_probs=20.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 033129           27 VSEKRNIEDHKRRLLATKFELKRKLYKSLY   56 (126)
Q Consensus        27 m~~~~~~rD~krR~l~~k~e~~R~~LK~i~   56 (126)
                      |+.....||..|.+.+.+....|++|.-++
T Consensus         3 ~Ads~~tr~~rkerIv~eCnavrqALQdLl   32 (40)
T 4e17_B            3 IQDSSCTRDDRRERIVAECNAVRQALQDLL   32 (40)
T ss_dssp             -------CCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccchhhcchhHHHHHHHHHHHHHHHHHHHH
Confidence            667788899999999999999999998765


No 11 
>1y6u_A XIS, excisionase from transposon TN916; structure, DNA architectural protein, tyrosine recombinase, winged-helix protein; NMR {Enterococcus faecalis}
Probab=29.59  E-value=29  Score=21.64  Aligned_cols=22  Identities=23%  Similarity=0.276  Sum_probs=18.1

Q ss_pred             hhcccCccHHHHHHhhhcC-CCC
Q 033129           98 VYEKFRMSRIVFRSLANQG-MLM  119 (126)
Q Consensus        98 v~r~f~LSRi~fR~la~~G-~lp  119 (126)
                      .-..+|+++-.+++|+..| ..|
T Consensus        22 aAeylgIg~~~l~~L~~~~~~~~   44 (70)
T 1y6u_A           22 ASKYFRIGENKLRRLAEENKNAN   44 (70)
T ss_dssp             HHHHTCSCHHHHHHHHHHCTTCS
T ss_pred             HHHHHCcCHHHHHHHHHcCCCCC
Confidence            3457899999999999998 544


No 12 
>2og0_A Excisionase; protein-DNA complex, DNA architectural protein, 'winged'HELI protein, phage excision; 1.90A {Enterobacteria phage lambda} SCOP: a.6.1.7 PDB: 1lx8_A 1rh6_A 2ief_A
Probab=28.69  E-value=29  Score=20.64  Aligned_cols=20  Identities=20%  Similarity=0.082  Sum_probs=18.2

Q ss_pred             CccHHHHHHhhhcCCC--CCcc
Q 033129          103 RMSRIVFRSLANQGML--MGVK  122 (126)
Q Consensus       103 ~LSRi~fR~la~~G~l--pGv~  122 (126)
                      +.|.--++.+|.+|.|  |+++
T Consensus        15 ~~s~~Tl~r~ar~G~I~Pp~~K   36 (52)
T 2og0_A           15 PRSLETVRRWVRESRIFPPPVK   36 (52)
T ss_dssp             CCCHHHHHHHHHTTCEESCCEE
T ss_pred             CCCHHHHHHHHHCCCCCCcccc
Confidence            6899999999999999  8876


No 13 
>1z4h_A TORI, TOR inhibition protein; winged helix, reverse turn, protein binding, DNA binding protein; NMR {Escherichia coli}
Probab=28.66  E-value=11  Score=22.78  Aligned_cols=26  Identities=8%  Similarity=0.060  Sum_probs=22.5

Q ss_pred             cchhhcccCccHHHHHHhhhcCCCCC
Q 033129           95 SRAVYEKFRMSRIVFRSLANQGMLMG  120 (126)
Q Consensus        95 ~Rgv~r~f~LSRi~fR~la~~G~lpG  120 (126)
                      ..-|-..+|+||--+.++...|.+|-
T Consensus        13 ~~eva~~lgvsrstiy~~~~~g~fP~   38 (66)
T 1z4h_A           13 LKFIMADTGFGKTFIYDRIKSGDLPK   38 (66)
T ss_dssp             HHHHHHHHSSCHHHHHHHHHHHHCCC
T ss_pred             HHHHHHHHCcCHHHHHHHHHCCCCCC
Confidence            44566788999999999999999997


No 14 
>2kfs_A Conserved hypothetical regulatory protein; WHTH, DNA binding, phosphorylation, DNA-binding protein; NMR {Mycobacterium tuberculosis}
Probab=25.65  E-value=38  Score=24.53  Aligned_cols=26  Identities=19%  Similarity=0.249  Sum_probs=22.6

Q ss_pred             hhcccCccHHHHHHhhhcCCCCCccc
Q 033129           98 VYEKFRMSRIVFRSLANQGMLMGVKK  123 (126)
Q Consensus        98 v~r~f~LSRi~fR~la~~G~lpGv~K  123 (126)
                      |-...|+|+...+++...|.||+|+.
T Consensus        37 VAe~LgVs~srV~~LIr~G~L~AVr~   62 (148)
T 2kfs_A           37 VAELLGVPVSKVAQQLREGHLVAVRR   62 (148)
T ss_dssp             HHHHHTCCHHHHHHHHHTTSCCCEEE
T ss_pred             HHHHhCCCHHHHHHHHHCCCceEEEE
Confidence            33467999999999999999999985


No 15 
>1pm6_A Excisionase; antiparallel beta-sheet, winged-helix, CIS-trans-trans triproline, gene regulation; NMR {Enterobacteria phage HK022} SCOP: a.6.1.7
Probab=20.02  E-value=49  Score=20.97  Aligned_cols=20  Identities=20%  Similarity=0.082  Sum_probs=18.1

Q ss_pred             CccHHHHHHhhhcCCC--CCcc
Q 033129          103 RMSRIVFRSLANQGML--MGVK  122 (126)
Q Consensus       103 ~LSRi~fR~la~~G~l--pGv~  122 (126)
                      +.|.--++.+|.+|.|  |+++
T Consensus        15 ~~s~~Tl~r~ar~G~I~Pp~~K   36 (72)
T 1pm6_A           15 PRSLETVRRWVRESRIFPPPVK   36 (72)
T ss_dssp             CCCHHHHHHHHHHTCEESCCEE
T ss_pred             CCCHHHHHHHHHCCCCCCchhh
Confidence            6899999999999999  8875


Done!