BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033131
(126 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P92959|RK24_ARATH 50S ribosomal protein L24, chloroplastic OS=Arabidopsis thaliana
GN=RPL24 PE=2 SV=2
Length = 198
Score = 193 bits (490), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 92/126 (73%), Positives = 109/126 (86%)
Query: 1 MHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVKKREEEEQGQIIKIE 60
MHVK GDTVKVI+G DKGKIGE+TK+F HNST+++KD+NLKTKH+K REE E GQI+KIE
Sbjct: 71 MHVKFGDTVKVISGRDKGKIGEVTKIFTHNSTIVIKDVNLKTKHMKSREEGEPGQIVKIE 130
Query: 61 APIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIIDSAENWKKLKEANRQEKT 120
APIHSSNVMLYSKE +V SRVGHKVL+DG +VRYLIKTGE+ID+ E WK LKEA +E T
Sbjct: 131 APIHSSNVMLYSKEKDVVSRVGHKVLEDGQKVRYLIKTGELIDTIEKWKLLKEAKDKETT 190
Query: 121 EVATAA 126
+VA +
Sbjct: 191 QVAVTS 196
>sp|P11893|RK24_PEA 50S ribosomal protein L24, chloroplastic OS=Pisum sativum GN=RPL24
PE=2 SV=1
Length = 194
Score = 189 bits (481), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 93/124 (75%), Positives = 108/124 (87%)
Query: 1 MHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVKKREEEEQGQIIKIE 60
+HVK GDTVKVI+G +KG+IGEITK+F+HNS+V+VKDINLKTKHVK +E E GQI K+E
Sbjct: 71 LHVKVGDTVKVISGHEKGQIGEITKIFKHNSSVIVKDINLKTKHVKSNQEGEPGQINKVE 130
Query: 61 APIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIIDSAENWKKLKEANRQEKT 120
APIHSSNVMLYSKE +V SRVGHKVL++G RVRYLIKTGEIIDS ENWKKLKEAN++
Sbjct: 131 APIHSSNVMLYSKEKDVTSRVGHKVLENGKRVRYLIKTGEIIDSEENWKKLKEANKKTAE 190
Query: 121 EVAT 124
AT
Sbjct: 191 VAAT 194
>sp|Q02764|RK24_TOBAC 50S ribosomal protein L24, chloroplastic OS=Nicotiana tabacum
GN=RPL24 PE=1 SV=1
Length = 187
Score = 189 bits (481), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 94/126 (74%), Positives = 107/126 (84%), Gaps = 2/126 (1%)
Query: 1 MHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVKKREEEEQGQIIKIE 60
MHVK GDTVK+I+G DKGK+GEIT++ +HNS V+VKD+NLKTKHVK R E+E GQI+KIE
Sbjct: 62 MHVKLGDTVKIISGHDKGKVGEITEIIKHNSKVVVKDVNLKTKHVKSRSEDEPGQIVKIE 121
Query: 61 APIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIIDSAENWKKLKEANRQEKT 120
APIHSSNVMLYSKE +VASRVGHK LD+G RVRYLIKTGEIIDSAENWK K +EKT
Sbjct: 122 APIHSSNVMLYSKEQKVASRVGHKTLDNGKRVRYLIKTGEIIDSAENWK--KAVKEKEKT 179
Query: 121 EVATAA 126
A AA
Sbjct: 180 TEAVAA 185
>sp|P27683|RK24_SPIOL 50S ribosomal protein L24, chloroplastic OS=Spinacia oleracea
GN=RPL24 PE=1 SV=1
Length = 191
Score = 166 bits (419), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 84/125 (67%), Positives = 102/125 (81%), Gaps = 1/125 (0%)
Query: 2 HVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVKKREEEEQGQIIKIEA 61
HVK GDTVKVI+G +KGKIGEI+K+ +HNSTV++KD+N KTKHVK +EE EQGQIIKIEA
Sbjct: 68 HVKVGDTVKVISGGEKGKIGEISKIHKHNSTVIIKDLNFKTKHVKSKEEGEQGQIIKIEA 127
Query: 62 PIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIIDSAENWKKLKEANRQEKTE 121
IHSSNVML KE EVA RVGHK+L+D +VRYLIKTGEI+D+ + WK+++ E T
Sbjct: 128 AIHSSNVMLILKEQEVADRVGHKILEDVRKVRYLIKTGEIVDTPDRWKEIQNKKESE-TA 186
Query: 122 VATAA 126
VA AA
Sbjct: 187 VAVAA 191
>sp|B0JHZ2|RL24_MICAN 50S ribosomal protein L24 OS=Microcystis aeruginosa (strain
NIES-843) GN=rplX PE=3 SV=1
Length = 117
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 62/103 (60%), Positives = 80/103 (77%)
Query: 1 MHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVKKREEEEQGQIIKIE 60
MHVK GD V+VIAG DKGK+GEI + STV+VK +N++TKH K ++E E GQI+ E
Sbjct: 15 MHVKKGDVVQVIAGSDKGKVGEILRALPQESTVVVKGVNIRTKHTKPQQEGESGQIVTYE 74
Query: 61 APIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 103
APIHSS VMLYS++ ++ASRVG+ + +DG +VR L KTGEIID
Sbjct: 75 APIHSSKVMLYSEKKKIASRVGYTLTEDGRKVRILKKTGEIID 117
>sp|B1XJS8|RL24_SYNP2 50S ribosomal protein L24 OS=Synechococcus sp. (strain ATCC 27264 /
PCC 7002 / PR-6) GN=rplX PE=3 SV=1
Length = 116
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 62/103 (60%), Positives = 83/103 (80%)
Query: 1 MHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVKKREEEEQGQIIKIE 60
MHVK GDTV+VI+G DKGK+GE+ K +S V+VKD+N++TKHVK ++E E GQI E
Sbjct: 14 MHVKTGDTVQVISGRDKGKVGEVIKTLPKSSKVVVKDVNIRTKHVKPQQEGESGQIQTFE 73
Query: 61 APIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 103
APIHSSNVM YS++ +VASR+G+++ +DG +VR L KTGE+ID
Sbjct: 74 APIHSSNVMHYSEKEKVASRIGYQLTEDGRKVRVLKKTGEVID 116
>sp|Q8DMM1|RL24_THEEB 50S ribosomal protein L24 OS=Thermosynechococcus elongatus (strain
BP-1) GN=rplX PE=3 SV=1
Length = 117
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 64/103 (62%), Positives = 76/103 (73%)
Query: 1 MHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVKKREEEEQGQIIKIE 60
MHVK GDTV+VIAG DK K+GE+ VF S V+VK +NLKTKH+K R+E E GQII E
Sbjct: 15 MHVKKGDTVQVIAGSDKAKVGEVLAVFPKTSQVIVKGVNLKTKHLKPRQEGESGQIITKE 74
Query: 61 APIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 103
APIHS VMLYS + VASR+ + +DG +VR L KTGEIID
Sbjct: 75 APIHSCKVMLYSTKQNVASRICYTYTEDGRKVRMLKKTGEIID 117
>sp|B1WQS1|RL24_CYAA5 50S ribosomal protein L24 OS=Cyanothece sp. (strain ATCC 51142)
GN=rplX PE=3 SV=1
Length = 115
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 62/104 (59%), Positives = 79/104 (75%)
Query: 1 MHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVKKREEEEQGQIIKIE 60
MHVK GDT++VI+G DKGK+GE+ K S V+VK +N+KTKHVK ++E E GQI E
Sbjct: 12 MHVKTGDTIQVISGRDKGKVGEVLKTIPTTSEVVVKGVNVKTKHVKPQQEGESGQIATFE 71
Query: 61 APIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIIDS 104
APIHSSNVMLYS + +VASR+ + ++G +VR L KTGEIIDS
Sbjct: 72 APIHSSNVMLYSTKEQVASRISYTFTEEGRKVRMLKKTGEIIDS 115
>sp|Q110B8|RL24_TRIEI 50S ribosomal protein L24 OS=Trichodesmium erythraeum (strain
IMS101) GN=rplX PE=3 SV=1
Length = 122
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 62/103 (60%), Positives = 80/103 (77%)
Query: 1 MHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVKKREEEEQGQIIKIE 60
+HVK GDTV++IAG DKGK+GE+ KV S V+VKD+N+ TKHVK ++E E G+I+ E
Sbjct: 20 VHVKKGDTVQIIAGKDKGKVGEVLKVLPKVSKVIVKDVNIITKHVKPQQEGESGKIVTTE 79
Query: 61 APIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 103
APIHSSNVMLYS + +VASR+ + DDG +VR L KTGE+ID
Sbjct: 80 APIHSSNVMLYSTKQKVASRICYTFTDDGRKVRMLKKTGEVID 122
>sp|P73309|RL24_SYNY3 50S ribosomal protein L24 OS=Synechocystis sp. (strain PCC 6803 /
Kazusa) GN=rplX PE=3 SV=1
Length = 115
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 61/103 (59%), Positives = 79/103 (76%)
Query: 1 MHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVKKREEEEQGQIIKIE 60
MHVK GDT++VI+G DKGK+GE+ + +S V+VK +N++TKHVK R+E E GQI E
Sbjct: 13 MHVKKGDTIQVISGKDKGKVGEVLRTIPSHSQVVVKGVNIRTKHVKPRQEGESGQISSYE 72
Query: 61 APIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 103
APIHSS VMLYS + ++ASR+ + V DDG +VR L KTGEIID
Sbjct: 73 APIHSSKVMLYSTKEKIASRICYTVTDDGRKVRMLKKTGEIID 115
>sp|O24700|RL24_SYNP6 50S ribosomal protein L24 OS=Synechococcus sp. (strain ATCC 27144 /
PCC 6301 / SAUG 1402/1) GN=rplX PE=3 SV=1
Length = 113
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 63/103 (61%), Positives = 77/103 (74%)
Query: 1 MHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVKKREEEEQGQIIKIE 60
+HVK GDTV+VIAG DKG +GE+ +VF S V+VK +NL+TKHVK R+E E GQI+ E
Sbjct: 11 VHVKKGDTVQVIAGKDKGTVGEVLQVFPKTSRVLVKGVNLRTKHVKPRQEGESGQIVVEE 70
Query: 61 APIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 103
A IHSSNV LYS +VASRV + +DG +VR L KTGEIID
Sbjct: 71 ASIHSSNVQLYSTTQKVASRVAYTFTEDGRKVRKLKKTGEIID 113
>sp|Q31L18|RL24_SYNE7 50S ribosomal protein L24 OS=Synechococcus elongatus (strain PCC
7942) GN=rplX PE=3 SV=1
Length = 113
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 63/103 (61%), Positives = 77/103 (74%)
Query: 1 MHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVKKREEEEQGQIIKIE 60
+HVK GDTV+VIAG DKG +GE+ +VF S V+VK +NL+TKHVK R+E E GQI+ E
Sbjct: 11 VHVKKGDTVQVIAGKDKGTVGEVLQVFPKTSRVLVKGVNLRTKHVKPRQEGESGQIVVEE 70
Query: 61 APIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 103
A IHSSNV LYS +VASRV + +DG +VR L KTGEIID
Sbjct: 71 ASIHSSNVQLYSTTQKVASRVAYTFTEDGRKVRKLKKTGEIID 113
>sp|Q3MFB0|RL24_ANAVT 50S ribosomal protein L24 OS=Anabaena variabilis (strain ATCC 29413
/ PCC 7937) GN=rplX PE=3 SV=1
Length = 117
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/104 (58%), Positives = 78/104 (75%)
Query: 1 MHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVKKREEEEQGQIIKIE 60
+HVK GDTV+VIAG DKGK+GE+ K S V+VK +N+KTKHVK ++E E G+I+ E
Sbjct: 14 LHVKTGDTVQVIAGKDKGKVGEVIKALPQLSKVIVKGVNIKTKHVKPQQEGESGRIVTQE 73
Query: 61 APIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIIDS 104
APIHSSNVMLYS + VASRV + +G +VR L KTGEI+D+
Sbjct: 74 APIHSSNVMLYSTKQNVASRVCYTFTAEGKKVRKLKKTGEILDN 117
>sp|B2ITP4|RL24_NOSP7 50S ribosomal protein L24 OS=Nostoc punctiforme (strain ATCC 29133
/ PCC 73102) GN=rplX PE=3 SV=1
Length = 117
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 62/103 (60%), Positives = 76/103 (73%)
Query: 1 MHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVKKREEEEQGQIIKIE 60
MHVK GDTV+VIAG DKGKIGEI + S V+VK +N+KTKHVK ++E E G+I+ E
Sbjct: 14 MHVKTGDTVQVIAGKDKGKIGEIVQALPQLSKVIVKGVNIKTKHVKPQQEGESGRIVTQE 73
Query: 61 APIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 103
PIHSSNVMLYS + VASRV + +G +VR L KTGEI+D
Sbjct: 74 FPIHSSNVMLYSTKQNVASRVCYTFTSEGKKVRKLKKTGEILD 116
>sp|B0C1E4|RL24_ACAM1 50S ribosomal protein L24 OS=Acaryochloris marina (strain MBIC
11017) GN=rplX PE=3 SV=1
Length = 115
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 63/103 (61%), Positives = 74/103 (71%)
Query: 1 MHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVKKREEEEQGQIIKIE 60
MHVK GDTV+VIAG DK K+GE+ V S V+V+ +N+KTKHVK R E E GQI +E
Sbjct: 13 MHVKKGDTVQVIAGKDKAKVGEVIDVLPKLSQVVVEGVNMKTKHVKPRSESESGQISTVE 72
Query: 61 APIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 103
PIHSSNVMLYS + VASRV + D G +VR L KTGEIID
Sbjct: 73 FPIHSSNVMLYSNKENVASRVCYTFDDSGRKVRMLKKTGEIID 115
>sp|A6MW12|RK24_RHDSA 50S ribosomal protein L24, chloroplastic OS=Rhodomonas salina
GN=rpl24 PE=3 SV=1
Length = 102
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 75/95 (78%)
Query: 1 MHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVKKREEEEQGQIIKIE 60
MHVK GDTVK++ G DKGKIGEITK+ + ++ V+V+DIN+K KHVK R+E E G+I++ E
Sbjct: 1 MHVKQGDTVKILTGKDKGKIGEITKIIKGSNQVVVQDINVKKKHVKPRKEGEIGKILQFE 60
Query: 61 APIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYL 95
APIHSSNVM+Y+ E +VASRV ++ + G ++R
Sbjct: 61 APIHSSNVMVYNAESQVASRVNYQKDESGKKIRVF 95
>sp|Q2JQN1|RL24_SYNJA 50S ribosomal protein L24 OS=Synechococcus sp. (strain JA-3-3Ab)
GN=rplX PE=3 SV=1
Length = 132
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 56/103 (54%), Positives = 76/103 (73%)
Query: 1 MHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVKKREEEEQGQIIKIE 60
M +K GDTV+VI+G DKGKIGE+ +VF + V+V+ +N+ T H K + E E G+I E
Sbjct: 30 MRIKKGDTVQVISGDDKGKIGEVLQVFPERNMVLVEGVNIVTYHRKPQREGESGRIETKE 89
Query: 61 APIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 103
APIH+ VMLYSK+ EVASR+G+++ DG +VR L KTGEI+D
Sbjct: 90 APIHACKVMLYSKKQEVASRIGYQITADGRKVRVLKKTGEILD 132
>sp|Q7NEG3|RL24_GLOVI 50S ribosomal protein L24 OS=Gloeobacter violaceus (strain PCC
7421) GN=rplX PE=3 SV=1
Length = 116
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 55/103 (53%), Positives = 77/103 (74%), Gaps = 1/103 (0%)
Query: 1 MHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVKKREEEEQGQIIKIE 60
HVK GDTV+VI+G DKGK+G++++V V+V+ +N++TKHVK + ++QGQ ++ E
Sbjct: 14 FHVKKGDTVQVISGKDKGKVGKVSEVLPTAGKVIVEGVNMQTKHVKP-QGDQQGQTLRRE 72
Query: 61 APIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 103
API+S VMLYS + + ASRVGH V D G +VR L KTGEI+D
Sbjct: 73 APIYSCKVMLYSDKKKQASRVGHTVTDAGKKVRVLKKTGEILD 115
>sp|Q2JIL6|RL24_SYNJB 50S ribosomal protein L24 OS=Synechococcus sp. (strain
JA-2-3B'a(2-13)) GN=rplX PE=3 SV=1
Length = 132
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 54/103 (52%), Positives = 73/103 (70%)
Query: 1 MHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVKKREEEEQGQIIKIE 60
M +K GDTV+VI+G DKGKIGE+ +VF + V+V+ +N+ T H K + E E G+I E
Sbjct: 30 MRIKQGDTVQVISGDDKGKIGEVLRVFPERNMVLVEGVNIVTYHRKPQREGESGRIETKE 89
Query: 61 APIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 103
API VM YSK+ EVASR+G+++ DG +VR L KTGEI+D
Sbjct: 90 APIPVCKVMAYSKKQEVASRIGYQITADGRKVRVLKKTGEILD 132
>sp|Q8YPJ0|RL24_NOSS1 50S ribosomal protein L24 OS=Nostoc sp. (strain PCC 7120 / UTEX
2576) GN=rplX PE=3 SV=2
Length = 149
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 54/97 (55%), Positives = 71/97 (73%)
Query: 8 TVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVKKREEEEQGQIIKIEAPIHSSN 67
T ++IAG DKGK+GE+ K S V+VK +N+KTKHVK ++E E G+I+ EAPIHSSN
Sbjct: 53 TKQIIAGKDKGKVGEVIKALPQLSKVVVKGVNIKTKHVKPQQEGESGRIVTQEAPIHSSN 112
Query: 68 VMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIIDS 104
VMLYS + VASRV + +G +VR L KTGEI+D+
Sbjct: 113 VMLYSTKQNVASRVCYTFTAEGKKVRKLKKTGEILDN 149
>sp|A5GIT4|RL24_SYNPW 50S ribosomal protein L24 OS=Synechococcus sp. (strain WH7803)
GN=rplX PE=3 SV=1
Length = 118
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 51/103 (49%), Positives = 73/103 (70%)
Query: 1 MHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVKKREEEEQGQIIKIE 60
M ++ GDTV+VIAG DKGK GE+ + + + V+V+ +N++T+HVK +E E G+I+ E
Sbjct: 16 MRLRKGDTVQVIAGKDKGKTGEVLRTLPNENRVIVEGVNMRTRHVKPTQEGESGRIVTEE 75
Query: 61 APIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 103
A +H+SNVMLYS +VASRV DG++ R L KTGE+ID
Sbjct: 76 ASLHASNVMLYSTAKKVASRVELITEKDGSKKRRLKKTGEVID 118
>sp|Q1XDI5|RK24_PORYE 50S ribosomal protein L24, chloroplastic OS=Porphyra yezoensis
GN=rpl24 PE=3 SV=1
Length = 116
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/102 (50%), Positives = 71/102 (69%)
Query: 1 MHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVKKREEEEQGQIIKIE 60
+ +K GD V+VI+G DK K GEI + + V+VK INLK KH K ++E E G+IIK E
Sbjct: 14 IKLKKGDLVQVISGSDKTKTGEIIAIIYKTNKVIVKGINLKVKHKKPQQEGETGEIIKFE 73
Query: 61 APIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEII 102
APIH+SNVML+S++ +ASR + D G ++R L KTGE+I
Sbjct: 74 APIHTSNVMLFSEQNNIASRSSVIINDKGQKIRKLKKTGELI 115
>sp|A5GVX1|RL24_SYNR3 50S ribosomal protein L24 OS=Synechococcus sp. (strain RCC307)
GN=rplX PE=3 SV=1
Length = 113
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 51/103 (49%), Positives = 73/103 (70%)
Query: 1 MHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVKKREEEEQGQIIKIE 60
M ++ GDTV+VIAG DKGK GE+ + + V+V+ +NL+T+HVK +E E G+I+ E
Sbjct: 11 MRIRKGDTVQVIAGKDKGKTGEVLRTLPWENRVVVQGVNLRTRHVKPAQEGESGRIVTEE 70
Query: 61 APIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 103
A +H+SNVM+YS + +VASRV V DG + R L KTGE++D
Sbjct: 71 ASLHASNVMVYSTDKKVASRVEIVVDKDGNKKRKLKKTGELLD 113
>sp|A0PXV7|RL24_CLONN 50S ribosomal protein L24 OS=Clostridium novyi (strain NT) GN=rplX
PE=3 SV=1
Length = 105
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 51/102 (50%), Positives = 68/102 (66%)
Query: 1 MHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVKKREEEEQGQIIKIE 60
+HV+ D V VI+G DKGK+ E+ V+ S V+VKD N+ TKHVK E QG I+K E
Sbjct: 4 VHVRRTDKVVVISGKDKGKVSEVLAVYPKTSKVLVKDANVVTKHVKPNRENMQGGIVKKE 63
Query: 61 APIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEII 102
AP++SS VMLY A+R+ K+L+DGT+VR K GEI+
Sbjct: 64 APMNSSKVMLYCTNCNSATRISKKLLEDGTKVRVCKKCGEIL 105
>sp|Q3AW82|RL24_SYNS9 50S ribosomal protein L24 OS=Synechococcus sp. (strain CC9902)
GN=rplX PE=3 SV=1
Length = 118
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 50/103 (48%), Positives = 73/103 (70%)
Query: 1 MHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVKKREEEEQGQIIKIE 60
M ++ GDTV+VIAG DKGK G + + + + V+V+ +N++T+H K +E E G+I+ E
Sbjct: 16 MRIRKGDTVQVIAGKDKGKTGAVLRTLPNENRVIVEGVNMRTRHEKPSQEGESGRIVTEE 75
Query: 61 APIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 103
A +H+SNVMLYS + +VASRV V DGT+ R L KTGE++D
Sbjct: 76 ASLHASNVMLYSTDKKVASRVEIVVEKDGTKKRKLKKTGEVLD 118
>sp|A2C4Y8|RL24_PROM1 50S ribosomal protein L24 OS=Prochlorococcus marinus (strain
NATL1A) GN=rplX PE=3 SV=1
Length = 118
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 52/103 (50%), Positives = 73/103 (70%)
Query: 1 MHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVKKREEEEQGQIIKIE 60
M ++ GDTV+VI+G DKGK GE+ K + + V+V+ IN +TKHVK +E E G+I E
Sbjct: 16 MKIRKGDTVQVISGKDKGKTGEVLKTLPYENRVLVQGINQRTKHVKPSQEGETGRIETKE 75
Query: 61 APIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 103
P+H+SNVM+YS + +VAS+V V DG++ R L KTGE+ID
Sbjct: 76 FPLHASNVMIYSTKEKVASKVEIFVDKDGSKKRRLKKTGELID 118
>sp|A2CC38|RL24_PROM3 50S ribosomal protein L24 OS=Prochlorococcus marinus (strain MIT
9303) GN=rplX PE=3 SV=1
Length = 118
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 50/103 (48%), Positives = 71/103 (68%)
Query: 1 MHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVKKREEEEQGQIIKIE 60
M + GDTV+VI G DKGK GE+ + + V+V+ +N++T+HVK +E E G+I+ E
Sbjct: 16 MRIHKGDTVQVITGKDKGKTGEVLRTLPIENRVIVQGVNIRTRHVKPTQEGESGRIVTEE 75
Query: 61 APIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 103
A +H+SNVMLYS ++ASRV V DG++ R L KTGE+ID
Sbjct: 76 ASVHASNVMLYSNNKKIASRVALVVEKDGSKKRRLKKTGELID 118
>sp|Q97EI9|RL24_CLOAB 50S ribosomal protein L24 OS=Clostridium acetobutylicum (strain
ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787)
GN=rplX PE=3 SV=1
Length = 106
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 50/100 (50%), Positives = 69/100 (69%)
Query: 1 MHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVKKREEEEQGQIIKIE 60
+HV+ D+V VI+G D+GKIGE+ V TV++KD+N+ KH K +E QG +IK E
Sbjct: 5 IHVRKQDSVVVISGKDRGKIGEVLAVNPKKGTVLIKDVNVVVKHQKANKENMQGGLIKKE 64
Query: 61 APIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGE 100
API+S+ VMLY + + A+R+ KVLDDGT+VR K GE
Sbjct: 65 APINSAKVMLYCTKCKTATRISKKVLDDGTKVRVCKKCGE 104
>sp|Q0ID16|RL24_SYNS3 50S ribosomal protein L24 OS=Synechococcus sp. (strain CC9311)
GN=rplX PE=3 SV=1
Length = 103
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/103 (47%), Positives = 72/103 (69%)
Query: 1 MHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVKKREEEEQGQIIKIE 60
M ++ GDTV+VIAG DKGK GE+ + + + V+V+ +N++T+HVK +E E G+I+ E
Sbjct: 1 MRLRKGDTVQVIAGKDKGKTGEVLRTLPNENRVIVEGLNMRTRHVKPTQEGETGRIVTEE 60
Query: 61 APIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 103
A +H+SNVM YS +VASR+ DG++ R L KTGE+ID
Sbjct: 61 ASLHASNVMFYSTAKKVASRIELITEKDGSKKRRLKKTGEVID 103
>sp|B1KSL4|RL24_CLOBM 50S ribosomal protein L24 OS=Clostridium botulinum (strain Loch
Maree / Type A3) GN=rplX PE=3 SV=1
Length = 105
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/100 (52%), Positives = 67/100 (67%)
Query: 1 MHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVKKREEEEQGQIIKIE 60
+HV+ DTV VI+G DKGKIGE+ V V+VKD+N+ TKH K E QG II E
Sbjct: 4 IHVRKKDTVVVISGKDKGKIGEVLSVLPKKGKVIVKDVNVVTKHQKPNRENMQGGIIHKE 63
Query: 61 APIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGE 100
API SS VMLY + + A+R+ +K+L+DGT+VR K GE
Sbjct: 64 APIFSSKVMLYCDKCKSATRISNKILEDGTKVRVCKKCGE 103
>sp|A7GJ63|RL24_CLOBL 50S ribosomal protein L24 OS=Clostridium botulinum (strain
Langeland / NCTC 10281 / Type F) GN=rplX PE=3 SV=1
Length = 105
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/100 (52%), Positives = 67/100 (67%)
Query: 1 MHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVKKREEEEQGQIIKIE 60
+HV+ DTV VI+G DKGKIGE+ V V+VKD+N+ TKH K E QG II E
Sbjct: 4 IHVRKKDTVVVISGKDKGKIGEVLSVLPKKGKVIVKDVNVVTKHQKPNRENMQGGIIHKE 63
Query: 61 APIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGE 100
API SS VMLY + + A+R+ +K+L+DGT+VR K GE
Sbjct: 64 APIFSSKVMLYCDKCKSATRISNKILEDGTKVRVCKKCGE 103
>sp|B1IGE3|RL24_CLOBK 50S ribosomal protein L24 OS=Clostridium botulinum (strain Okra /
Type B1) GN=rplX PE=3 SV=1
Length = 105
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/100 (52%), Positives = 67/100 (67%)
Query: 1 MHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVKKREEEEQGQIIKIE 60
+HV+ DTV VI+G DKGKIGE+ V V+VKD+N+ TKH K E QG II E
Sbjct: 4 IHVRKKDTVVVISGKDKGKIGEVLSVLPKKGKVIVKDVNVVTKHQKPNRENMQGGIIHKE 63
Query: 61 APIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGE 100
API SS VMLY + + A+R+ +K+L+DGT+VR K GE
Sbjct: 64 APIFSSKVMLYCDKCKSATRISNKILEDGTKVRVCKKCGE 103
>sp|Q7U4I9|RL24_SYNPX 50S ribosomal protein L24 OS=Synechococcus sp. (strain WH8102)
GN=rplX PE=3 SV=1
Length = 118
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/103 (47%), Positives = 73/103 (70%)
Query: 1 MHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVKKREEEEQGQIIKIE 60
M ++ GDTV+VIAG DKGK GE+ + + + ++V+ +N++T+H K +E E G+I+ E
Sbjct: 16 MRIRKGDTVQVIAGKDKGKTGEVLRTLPNENRLIVEGVNMRTRHEKPTQEGETGRIVNEE 75
Query: 61 APIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 103
A +H+SNVMLYS +VASRV V DG++ R L KTGE++D
Sbjct: 76 ASLHASNVMLYSTAKKVASRVEIVVEKDGSKKRKLKKTGEVLD 118
>sp|Q3AMP1|RL24_SYNSC 50S ribosomal protein L24 OS=Synechococcus sp. (strain CC9605)
GN=rplX PE=3 SV=1
Length = 118
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/103 (48%), Positives = 73/103 (70%)
Query: 1 MHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVKKREEEEQGQIIKIE 60
M ++ GDTV+VIAG DKGK G + + + + V+V+ +N++T+H K +E E G+I+ E
Sbjct: 16 MRIRKGDTVQVIAGKDKGKTGAVLRTLPNENRVVVEGVNMRTRHEKPTQEGETGRIVTEE 75
Query: 61 APIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 103
A +H+SNVMLYS + +VASRV V DGT+ R L KTGE++D
Sbjct: 76 ASLHASNVMLYSTDKKVASRVEIVVEKDGTKKRRLKKTGEVLD 118
>sp|C3KVP0|RL24_CLOB6 50S ribosomal protein L24 OS=Clostridium botulinum (strain 657 /
Type Ba4) GN=rplX PE=3 SV=1
Length = 105
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/100 (52%), Positives = 67/100 (67%)
Query: 1 MHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVKKREEEEQGQIIKIE 60
+HV+ DTV VI+G DKGKIGE+ V V+VKD+N+ TKH K E QG II E
Sbjct: 4 IHVRKKDTVVVISGKDKGKIGEVLSVLPKKGKVIVKDVNVVTKHQKPNRENMQGGIIHKE 63
Query: 61 APIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGE 100
API SS VMLY + + A+R+ +K+L+DGT+VR K GE
Sbjct: 64 APIFSSKVMLYCDKCKSATRISNKILEDGTKVRICKKCGE 103
>sp|Q7V534|RL24_PROMM 50S ribosomal protein L24 OS=Prochlorococcus marinus (strain MIT
9313) GN=rplX PE=3 SV=1
Length = 118
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/103 (48%), Positives = 72/103 (69%)
Query: 1 MHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVKKREEEEQGQIIKIE 60
M + GDTV+VI G DKGK GE+ + + V+V+ +N++T+HVK +E E G+I+ E
Sbjct: 16 MRIHKGDTVQVITGKDKGKTGEVLRTLPIENRVIVQGVNIRTRHVKPTQEGESGRIVTEE 75
Query: 61 APIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 103
A +H+SNVMLYS + ++ASRV V DG++ R L KTGE+ID
Sbjct: 76 ASVHASNVMLYSNKKKIASRVELVVEKDGSKKRRLKKTGELID 118
>sp|A2BTC6|RL24_PROMS 50S ribosomal protein L24 OS=Prochlorococcus marinus (strain
AS9601) GN=rplX PE=3 SV=1
Length = 118
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/103 (48%), Positives = 70/103 (67%)
Query: 1 MHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVKKREEEEQGQIIKIE 60
M +K GD VKVI G DKGK GE+ K + V+VK INL+TKHVK +E E G+I+ E
Sbjct: 16 MRIKTGDLVKVINGKDKGKTGEVLKTIPLENRVVVKGINLRTKHVKPTQEGETGRILTEE 75
Query: 61 APIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 103
A +H+SNVM +SK+ + S++ + + +G + R L KTGE+ID
Sbjct: 76 ASLHASNVMFFSKDKNLTSKIEYFIDKEGVKKRRLKKTGEVID 118
>sp|Q7V9X3|RL24_PROMA 50S ribosomal protein L24 OS=Prochlorococcus marinus (strain SARG /
CCMP1375 / SS120) GN=rplX PE=3 SV=1
Length = 118
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/103 (48%), Positives = 72/103 (69%)
Query: 1 MHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVKKREEEEQGQIIKIE 60
M ++ GDTV+VI G +KGK GE+ K + V+V+ INL+T+HVK +E E G+I+ E
Sbjct: 16 MRIRKGDTVQVINGKEKGKTGEVLKTLPIENRVIVQGINLRTRHVKPTQEGESGRIVTEE 75
Query: 61 APIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 103
A +H+SNVM+YS + + ASRV + DG++ R L KTGE+ID
Sbjct: 76 ASLHASNVMVYSTKQKTASRVEVFIDKDGSKKRRLKKTGELID 118
>sp|B7GJ78|RL24_ANOFW 50S ribosomal protein L24 OS=Anoxybacillus flavithermus (strain DSM
21510 / WK1) GN=rplX PE=3 SV=1
Length = 103
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 51/103 (49%), Positives = 68/103 (66%), Gaps = 1/103 (0%)
Query: 1 MHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVKKREEEEQGQIIKIE 60
MHVK GD V+VI+G DKGK G I F + V+V+ +N+ KHVK + QG II E
Sbjct: 1 MHVKKGDKVQVISGKDKGKQGVILAAFPKKNRVLVEGVNIVKKHVKPSQANPQGGIINQE 60
Query: 61 APIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 103
APIH SNVM + + +RVG+KV+ DG +VRY ++GEI+D
Sbjct: 61 APIHVSNVMPLDPKTGLPTRVGYKVV-DGKKVRYAKRSGEILD 102
>sp|A8G750|RL24_PROM2 50S ribosomal protein L24 OS=Prochlorococcus marinus (strain MIT
9215) GN=rplX PE=3 SV=1
Length = 118
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 50/103 (48%), Positives = 70/103 (67%)
Query: 1 MHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVKKREEEEQGQIIKIE 60
M +K GD VKVI G +KGK GE+ K + V+VK INL+TKHVK +E E G+I+ E
Sbjct: 16 MRIKTGDLVKVINGKEKGKTGEVLKTIPLENKVVVKGINLRTKHVKPTQEGETGRILTEE 75
Query: 61 APIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 103
A +H+SNVM +SKE + S++ + + +G + R L KTGE+ID
Sbjct: 76 ASLHASNVMFFSKEKNLTSKIEYFIDKEGVKKRRLKKTGEVID 118
>sp|Q318J5|RL24_PROM9 50S ribosomal protein L24 OS=Prochlorococcus marinus (strain MIT
9312) GN=rplX PE=3 SV=1
Length = 118
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 50/103 (48%), Positives = 69/103 (66%)
Query: 1 MHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVKKREEEEQGQIIKIE 60
M +K GD VKVI G DKGK GE+ K + V+VK INL+TKHVK +E E G+I+ E
Sbjct: 16 MRIKTGDLVKVINGKDKGKTGEVLKTIPLENRVVVKGINLRTKHVKPTQEGETGRILTEE 75
Query: 61 APIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 103
A +H+SNVM +SK+ + S++ + + G + R L KTGE+ID
Sbjct: 76 ASLHASNVMFFSKDKNLTSKIEYFIDKQGVKKRRLKKTGEVID 118
>sp|A3PF36|RL24_PROM0 50S ribosomal protein L24 OS=Prochlorococcus marinus (strain MIT
9301) GN=rplX PE=3 SV=1
Length = 118
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 50/103 (48%), Positives = 70/103 (67%)
Query: 1 MHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVKKREEEEQGQIIKIE 60
M +K GD VKVI G +KGK GE+ K + V+VK INL+TKHVK +E E G+I+ E
Sbjct: 16 MRIKTGDLVKVINGKEKGKTGEVLKTIPLENRVVVKGINLRTKHVKPTQEGETGRILTEE 75
Query: 61 APIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 103
A +H+SNVM +SKE + S++ + + +G + R L KTGE+ID
Sbjct: 76 ASLHASNVMFFSKEKNLTSKIEYFIDKEGVKKRRLKKTGEVID 118
>sp|O46905|RK24_GUITH 50S ribosomal protein L24, chloroplastic OS=Guillardia theta
GN=rpl24 PE=3 SV=1
Length = 101
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 68/95 (71%)
Query: 1 MHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVKKREEEEQGQIIKIE 60
M +K GD V+VIAG KG+I E+ KV R ++++++K+IN+K KHVK ++E E GQI + E
Sbjct: 1 MTIKQGDKVQVIAGSYKGEITEVLKVIRKSNSLILKNINIKNKHVKPKKEGEVGQIKQFE 60
Query: 61 APIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYL 95
APIH SNVMLY +E ++ SR + DG +VR L
Sbjct: 61 APIHRSNVMLYDEESQIRSRSKFIISQDGKKVRVL 95
>sp|C1FMU0|RL24_CLOBJ 50S ribosomal protein L24 OS=Clostridium botulinum (strain Kyoto /
Type A2) GN=rplX PE=3 SV=1
Length = 105
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 51/100 (51%), Positives = 66/100 (66%)
Query: 1 MHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVKKREEEEQGQIIKIE 60
+HV+ DTV VI+G DK KIGE+ V V+VKD+N+ TKH K E QG II E
Sbjct: 4 IHVRKKDTVVVISGKDKSKIGEVLSVLPKKGKVIVKDVNVVTKHQKPNRENMQGGIIHKE 63
Query: 61 APIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGE 100
API SS VMLY + + A+R+ +K+L+DGT+VR K GE
Sbjct: 64 APIFSSKVMLYCDKCKSATRISNKILEDGTKVRVCKKCGE 103
>sp|A5I7J5|RL24_CLOBH 50S ribosomal protein L24 OS=Clostridium botulinum (strain Hall /
ATCC 3502 / NCTC 13319 / Type A) GN=rplX PE=3 SV=1
Length = 105
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 51/100 (51%), Positives = 66/100 (66%)
Query: 1 MHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVKKREEEEQGQIIKIE 60
+HV+ DTV VI+G DK KIGE+ V V+VKD+N+ TKH K E QG II E
Sbjct: 4 IHVRKKDTVVVISGKDKSKIGEVLSVLPKKGKVIVKDVNVVTKHQKPNRENMQGGIIHKE 63
Query: 61 APIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGE 100
API SS VMLY + + A+R+ +K+L+DGT+VR K GE
Sbjct: 64 APIFSSKVMLYCDKCKSATRISNKILEDGTKVRVCKKCGE 103
>sp|A7FZ58|RL24_CLOB1 50S ribosomal protein L24 OS=Clostridium botulinum (strain ATCC
19397 / Type A) GN=rplX PE=3 SV=1
Length = 105
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 51/100 (51%), Positives = 66/100 (66%)
Query: 1 MHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVKKREEEEQGQIIKIE 60
+HV+ DTV VI+G DK KIGE+ V V+VKD+N+ TKH K E QG II E
Sbjct: 4 IHVRKKDTVVVISGKDKSKIGEVLSVLPKKGKVIVKDVNVVTKHQKPNRENMQGGIIHKE 63
Query: 61 APIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGE 100
API SS VMLY + + A+R+ +K+L+DGT+VR K GE
Sbjct: 64 APIFSSKVMLYCDKCKSATRISNKILEDGTKVRVCKKCGE 103
>sp|Q46IS0|RL24_PROMT 50S ribosomal protein L24 OS=Prochlorococcus marinus (strain
NATL2A) GN=rplX PE=3 SV=1
Length = 118
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/103 (49%), Positives = 72/103 (69%)
Query: 1 MHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVKKREEEEQGQIIKIE 60
M ++ GDTV+VI+G DKGK GE+ K + + V+V+ IN +TKHVK +E E G+I E
Sbjct: 16 MKIRKGDTVQVISGKDKGKTGEVLKTLPYENRVLVQGINQRTKHVKPSQEGETGRIETKE 75
Query: 61 APIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 103
+H+SNVM+YS + +VAS+V V DG++ R L KTGE+ID
Sbjct: 76 FSLHASNVMIYSTKEKVASKVEIFVDKDGSKKRRLKKTGELID 118
>sp|A2BYS5|RL24_PROM5 50S ribosomal protein L24 OS=Prochlorococcus marinus (strain MIT
9515) GN=rplX PE=3 SV=1
Length = 118
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/103 (47%), Positives = 69/103 (66%)
Query: 1 MHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVKKREEEEQGQIIKIE 60
M +K GD VKVI G +KGK GE+ K + V+VK INL+TKHVK +E E G+I+ E
Sbjct: 16 MRIKTGDLVKVINGKEKGKTGEVLKTIPLENRVVVKGINLRTKHVKPTQEGESGRILTEE 75
Query: 61 APIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 103
A +H+SNVM +SK+ + S++ + +G + R L KTGE+ID
Sbjct: 76 ASLHASNVMFFSKDKNIVSKIEFFIDKEGVKKRKLKKTGELID 118
>sp|Q7UZV5|RL24_PROMP 50S ribosomal protein L24 OS=Prochlorococcus marinus subsp.
pastoris (strain CCMP1986 / MED4) GN=rplX PE=3 SV=1
Length = 118
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/103 (46%), Positives = 70/103 (67%)
Query: 1 MHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVKKREEEEQGQIIKIE 60
M +K GD VKVI G +KGK GE+ K + V+VK +NL+TKHVK +E E G+I+ E
Sbjct: 16 MRIKTGDLVKVINGKEKGKTGEVLKTIPLENRVVVKGVNLRTKHVKPSQEGESGRILTEE 75
Query: 61 APIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEIID 103
A +H+SNVM +SK+ + S++ + + +G + R L KTGE+ID
Sbjct: 76 ASLHASNVMFFSKDKNLISKIEYFIDKEGVKKRRLKKTGELID 118
>sp|B1X4Z7|RK24_PAUCH 50S ribosomal protein L24, organellar chromatophore OS=Paulinella
chromatophora GN=rpl24 PE=3 SV=1
Length = 118
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 70/102 (68%)
Query: 1 MHVKAGDTVKVIAGCDKGKIGEITKVFRHNSTVMVKDINLKTKHVKKREEEEQGQIIKIE 60
M ++ GD ++VI+G DKGKIGE+ + + + ++V+ +NL+T+HVK E G+I+ E
Sbjct: 16 MRIRKGDIIQVISGKDKGKIGEVLRTLPNENRLIVEGVNLRTRHVKPTSGGESGRIVTKE 75
Query: 61 APIHSSNVMLYSKEMEVASRVGHKVLDDGTRVRYLIKTGEII 102
A +H+SNVM YS E +VASR+ V DG R R L KTGEI+
Sbjct: 76 AYLHASNVMAYSTENKVASRIEIMVDSDGNRKRRLKKTGEIL 117
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.312 0.128 0.349
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,186,478
Number of Sequences: 539616
Number of extensions: 1583582
Number of successful extensions: 6053
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 727
Number of HSP's successfully gapped in prelim test: 154
Number of HSP's that attempted gapping in prelim test: 4804
Number of HSP's gapped (non-prelim): 888
length of query: 126
length of database: 191,569,459
effective HSP length: 92
effective length of query: 34
effective length of database: 141,924,787
effective search space: 4825442758
effective search space used: 4825442758
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 55 (25.8 bits)