Query 033132
Match_columns 126
No_of_seqs 142 out of 1017
Neff 7.5
Searched_HMMs 46136
Date Fri Mar 29 10:12:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033132.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/033132hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00411 nodulin MtN21 family 99.8 3.2E-19 7E-24 141.7 14.0 113 3-120 9-122 (358)
2 PRK11272 putative DMT superfam 99.6 8.2E-14 1.8E-18 107.3 14.1 117 1-125 1-121 (292)
3 TIGR00688 rarD rarD protein. T 99.6 6.4E-14 1.4E-18 105.7 12.6 112 7-125 2-122 (256)
4 PRK15430 putative chlorampheni 99.5 1.9E-13 4.1E-18 105.5 11.2 115 4-125 5-125 (296)
5 PRK10532 threonine and homoser 99.5 1.4E-12 3.1E-17 100.5 13.3 110 3-122 8-117 (293)
6 PRK11689 aromatic amino acid e 99.5 7.9E-13 1.7E-17 102.0 11.8 109 5-125 2-117 (295)
7 PF00892 EamA: EamA-like trans 99.4 1.8E-12 3.9E-17 86.3 8.5 102 17-124 1-105 (126)
8 TIGR00950 2A78 Carboxylate/Ami 99.4 2.8E-12 6E-17 96.2 10.4 96 19-125 1-99 (260)
9 PRK11453 O-acetylserine/cystei 99.4 1.5E-11 3.3E-16 95.0 12.9 103 9-125 6-112 (299)
10 TIGR00950 2A78 Carboxylate/Ami 99.1 3.2E-09 7E-14 79.6 14.2 114 5-125 126-244 (260)
11 TIGR00817 tpt Tpt phosphate/ph 99.1 3E-09 6.5E-14 82.1 13.8 98 22-125 17-117 (302)
12 PTZ00343 triose or hexose phos 99.0 1.8E-08 3.8E-13 79.9 14.0 97 22-125 64-166 (350)
13 COG0697 RhaT Permeases of the 98.9 1.1E-07 2.4E-12 71.2 13.7 118 2-125 2-123 (292)
14 COG2510 Predicted membrane pro 98.8 2.3E-08 4.9E-13 69.1 8.0 109 10-124 6-118 (140)
15 TIGR03340 phn_DUF6 phosphonate 98.8 8.3E-08 1.8E-12 73.5 11.8 109 9-125 3-115 (281)
16 PRK10532 threonine and homoser 98.7 1.3E-06 2.7E-11 67.4 14.2 111 6-124 147-260 (293)
17 PRK11272 putative DMT superfam 98.6 2.3E-06 4.9E-11 65.9 13.5 113 6-124 149-264 (292)
18 PRK11689 aromatic amino acid e 98.4 9.6E-06 2.1E-10 62.6 13.1 109 6-124 155-266 (295)
19 PF13536 EmrE: Multidrug resis 98.4 1.2E-06 2.6E-11 58.7 5.8 80 41-125 2-86 (113)
20 TIGR00817 tpt Tpt phosphate/ph 98.3 6.9E-06 1.5E-10 63.3 9.1 115 6-124 144-272 (302)
21 PRK11453 O-acetylserine/cystei 98.2 8.1E-05 1.8E-09 57.5 14.3 115 6-124 142-266 (299)
22 PLN00411 nodulin MtN21 family 98.1 0.00012 2.6E-09 58.5 13.9 110 8-124 190-307 (358)
23 COG2962 RarD Predicted permeas 98.0 0.00011 2.5E-09 57.0 10.0 118 1-125 1-124 (293)
24 TIGR00776 RhaT RhaT L-rhamnose 98.0 0.0002 4.4E-09 55.4 11.6 105 9-124 3-111 (290)
25 PTZ00343 triose or hexose phos 97.9 0.00062 1.3E-08 54.1 14.1 118 6-124 193-327 (350)
26 PF03151 TPT: Triose-phosphate 97.8 0.0013 2.8E-08 45.4 12.8 105 9-118 2-123 (153)
27 TIGR03340 phn_DUF6 phosphonate 97.8 7.2E-05 1.6E-09 57.2 6.7 114 6-125 143-263 (281)
28 COG0697 RhaT Permeases of the 97.7 0.0032 7E-08 47.0 13.9 104 6-118 153-257 (292)
29 TIGR00688 rarD rarD protein. T 97.6 0.0033 7.2E-08 47.2 12.7 99 11-121 150-253 (256)
30 TIGR00776 RhaT RhaT L-rhamnose 97.4 0.0031 6.8E-08 48.8 10.8 106 6-124 151-263 (290)
31 PF06027 DUF914: Eukaryotic pr 97.4 0.0056 1.2E-07 48.7 11.9 113 7-124 10-130 (334)
32 PRK15430 putative chlorampheni 97.3 0.007 1.5E-07 46.7 12.0 109 10-124 152-264 (296)
33 COG5006 rhtA Threonine/homoser 97.3 0.0042 9.1E-08 47.8 10.0 107 8-124 13-119 (292)
34 PF06027 DUF914: Eukaryotic pr 96.6 0.035 7.5E-07 44.2 10.5 107 4-115 165-272 (334)
35 KOG4510 Permease of the drug/m 96.1 0.00044 9.6E-09 53.6 -2.7 99 17-125 47-149 (346)
36 COG5006 rhtA Threonine/homoser 94.8 0.78 1.7E-05 35.6 10.7 110 8-124 149-261 (292)
37 PF08449 UAA: UAA transporter 94.0 2.1 4.5E-05 33.1 11.9 85 26-118 20-106 (303)
38 PF08449 UAA: UAA transporter 93.7 2.4 5.3E-05 32.7 11.8 107 8-119 155-268 (303)
39 KOG2765 Predicted membrane pro 93.1 0.57 1.2E-05 38.1 7.5 114 6-123 246-367 (416)
40 PRK15051 4-amino-4-deoxy-L-ara 92.1 2.3 5E-05 28.3 8.5 47 75-125 40-89 (111)
41 KOG1441 Glucose-6-phosphate/ph 90.4 1.6 3.5E-05 34.6 7.3 91 24-119 34-126 (316)
42 PRK02971 4-amino-4-deoxy-L-ara 90.3 4.4 9.5E-05 27.8 10.0 95 8-125 3-102 (129)
43 PF06800 Sugar_transport: Suga 89.4 3.6 7.9E-05 31.9 8.4 107 5-124 136-246 (269)
44 KOG1444 Nucleotide-sugar trans 87.4 13 0.00028 29.6 10.7 93 20-118 25-119 (314)
45 PF04657 DUF606: Protein of un 85.4 9.9 0.00022 26.3 11.4 78 35-118 29-106 (138)
46 PRK13499 rhamnose-proton sympo 84.0 21 0.00045 28.8 11.7 47 6-52 173-229 (345)
47 KOG4510 Permease of the drug/m 83.7 0.79 1.7E-05 36.0 2.0 98 10-118 194-295 (346)
48 KOG1441 Glucose-6-phosphate/ph 83.0 22 0.00047 28.3 10.0 97 5-107 161-266 (316)
49 KOG3912 Predicted integral mem 74.0 27 0.00058 27.8 7.7 91 20-118 16-128 (372)
50 KOG2765 Predicted membrane pro 72.3 8.8 0.00019 31.4 4.9 36 87-122 170-205 (416)
51 KOG2234 Predicted UDP-galactos 70.2 56 0.0012 26.4 12.3 113 7-124 15-143 (345)
52 PF10639 UPF0546: Uncharacteri 70.2 14 0.00029 25.0 4.8 89 13-125 2-93 (113)
53 KOG4314 Predicted carbohydrate 62.5 6.9 0.00015 29.6 2.3 35 87-121 64-98 (290)
54 PF05653 Mg_trans_NIPA: Magnes 62.1 74 0.0016 24.8 9.6 98 1-125 1-102 (300)
55 PRK13499 rhamnose-proton sympo 53.7 1.2E+02 0.0025 24.5 9.2 29 1-29 1-29 (345)
56 PF07857 DUF1632: CEO family ( 49.8 76 0.0017 24.4 6.3 30 4-33 180-209 (254)
57 PF06570 DUF1129: Protein of u 44.5 1.1E+02 0.0024 22.3 6.3 16 9-24 113-128 (206)
58 KOG2766 Predicted membrane pro 44.2 16 0.00034 28.7 1.8 95 5-105 164-258 (336)
59 KOG1444 Nucleotide-sugar trans 32.5 2.6E+02 0.0056 22.3 7.1 95 7-106 157-258 (314)
60 PF06691 DUF1189: Protein of u 32.3 2.2E+02 0.0047 21.3 9.8 68 50-124 181-249 (250)
61 PTZ00370 STEVOR; Provisional 28.6 1.3E+02 0.0029 23.7 4.6 32 25-57 246-277 (296)
62 PF01790 LGT: Prolipoprotein d 27.4 2.7E+02 0.0059 20.9 6.2 21 34-54 8-28 (256)
63 COG2323 Predicted membrane pro 26.8 2.8E+02 0.0061 20.9 8.7 79 37-122 4-82 (224)
64 KOG1443 Predicted integral mem 26.5 1.1E+02 0.0023 24.7 3.8 96 20-121 30-129 (349)
65 COG2962 RarD Predicted permeas 25.2 3.5E+02 0.0075 21.4 12.7 104 8-120 150-255 (293)
66 PF05969 PSII_Ycf12: Photosyst 24.9 1.2E+02 0.0026 16.0 2.9 19 105-123 12-30 (33)
67 PRK10578 hypothetical protein; 24.6 3E+02 0.0065 20.5 6.0 66 34-104 54-121 (207)
68 TIGR01478 STEVOR variant surfa 24.1 1.5E+02 0.0032 23.4 4.2 31 26-57 251-281 (295)
69 PF06210 DUF1003: Protein of u 23.0 2.1E+02 0.0045 19.0 4.2 46 13-60 11-58 (108)
70 PF07172 GRP: Glycine rich pro 21.8 1.5E+02 0.0032 19.3 3.3 17 9-25 8-24 (95)
71 KOG3817 Uncharacterized conser 20.7 4.9E+02 0.011 21.5 8.8 86 18-112 200-287 (452)
72 PF12725 DUF3810: Protein of u 20.1 3.4E+02 0.0073 21.4 5.6 12 91-102 71-82 (318)
No 1
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=99.82 E-value=3.2e-19 Score=141.68 Aligned_cols=113 Identities=30% Similarity=0.455 Sum_probs=100.9
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcC-CCCCCHHHHHHHHHHHHhh
Q 033132 3 KVGLAPVIGMMMAECAQVGLMFAGKAAMSDGMSNLVFVFYSNAFASLVLLPASLLFHRSQ-IPPLTLPILSAFFLLGFLG 81 (126)
Q Consensus 3 ~~~~~~~l~ll~~~~~wg~~~v~~k~~l~~g~~p~~l~~~R~~~A~l~L~~~~~~~~r~~-~~~~~~~~~~~l~llg~~G 81 (126)
.++.+||+.|+.+++.+++..++.|.+++.|+||+.++++|+.+|+++++|+++.++|++ +|+.+++++..+.++|++|
T Consensus 9 ~~~~~~~~~~~~~q~~~~~~~~~~k~a~~~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~l~g~~g 88 (358)
T PLN00411 9 RREAVFLTAMLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIGLLGFLG 88 (358)
T ss_pred hhccchHHHHHHHHHHHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHH
Confidence 356799999999999999999999999999999999999999999999999987765533 3455688899999999998
Q ss_pred cchhHHHHHHHHHHHhhcchHHHHHHHHHhHHHHHHHHH
Q 033132 82 YAKFYFFDLVAGFFLFDYNKFSCFYSFTCGIYCVTVLVI 120 (126)
Q Consensus 82 ~~~~~~~~~~~~~~gl~~tsa~~a~ii~~~~Pv~~~l~~ 120 (126)
. .++.+++.|++||||++++++.+++|++++++.
T Consensus 89 ~-----~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla 122 (358)
T PLN00411 89 S-----MYVITGYIGIEYSNPTLASAISNITPALTFILA 122 (358)
T ss_pred H-----HHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHH
Confidence 4 567789999999999999999999999999954
No 2
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=99.58 E-value=8.2e-14 Score=107.28 Aligned_cols=117 Identities=13% Similarity=-0.058 Sum_probs=94.6
Q ss_pred CCCcchHH-HHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHH
Q 033132 1 MGKVGLAP-VIGMMMAECAQVGLMFAGKAAMSDGMSNLVFVFYSNAFASLVLLPASLLFHRSQIPPLTLPILSAFFLLGF 79 (126)
Q Consensus 1 m~~~~~~~-~l~ll~~~~~wg~~~v~~k~~l~~g~~p~~l~~~R~~~A~l~L~~~~~~~~r~~~~~~~~~~~~~l~llg~ 79 (126)
|+-++..| .+.++.+.++||.++++.|.+++ ++||..++++|+.+|+++++++... +|++ +.+++++.+...+|.
T Consensus 1 ~~~~~~~~~~~~~~~~~~iWg~~~~~~K~~~~-~~~p~~~~~~R~~~a~l~ll~~~~~-~~~~--~~~~~~~~~~~~~g~ 76 (292)
T PRK11272 1 MRFRQLLPLFGALFALYIIWGSTYLVIRIGVE-SWPPLMMAGVRFLIAGILLLAFLLL-RGHP--LPTLRQWLNAALIGL 76 (292)
T ss_pred CchHHHHHHHHHHHHHHHHHhhHHHHHHHHhc-cCCHHHHHHHHHHHHHHHHHHHHHH-hCCC--CCcHHHHHHHHHHHH
Confidence 44455555 35567788999999999999987 4999999999999999999887654 2322 235678888899999
Q ss_pred hhcchhHHHHHHHHHHHh-hcchHHHHHHHHHhHHHHHHHHH--Hhhhh
Q 033132 80 LGYAKFYFFDLVAGFFLF-DYNKFSCFYSFTCGIYCVTVLVI--IKDVV 125 (126)
Q Consensus 80 ~G~~~~~~~~~~~~~~gl-~~tsa~~a~ii~~~~Pv~~~l~~--~~~~~ 125 (126)
++. ..++.+++.+. +++++++++++.++.|+++.++. .|||.
T Consensus 77 ~~~----~~~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~~~e~~ 121 (292)
T PRK11272 77 LLL----AVGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRLFGIRT 121 (292)
T ss_pred HHH----HHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHHhcccC
Confidence 887 78888999999 99999999999999999998743 56653
No 3
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=99.57 E-value=6.4e-14 Score=105.69 Aligned_cols=112 Identities=13% Similarity=0.041 Sum_probs=86.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHhhc-----CCCCCCHHH-HHHHHHHHHh
Q 033132 7 APVIGMMMAECAQVGLMFAGKAAMSDGMSNLVFVFYSNAFASLVLLPASLLFHRS-----QIPPLTLPI-LSAFFLLGFL 80 (126)
Q Consensus 7 ~~~l~ll~~~~~wg~~~v~~k~~l~~g~~p~~l~~~R~~~A~l~L~~~~~~~~r~-----~~~~~~~~~-~~~l~llg~~ 80 (126)
+.+..++.+.++||.+.+++|. +++ +||.+++++|+.+|++++.++...++|+ +.++.++++ +..+.+.|.+
T Consensus 2 ~g~~~~i~a~~~wg~~~~~~k~-~~~-~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 79 (256)
T TIGR00688 2 KGIIVSLLASFLFGYMYYYSKL-LKP-LPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLL 79 (256)
T ss_pred CcHHHHHHHHHHHHHHHHHHHH-hcc-CCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHH
Confidence 4678899999999999999998 455 9999999999999998887765443221 111122333 3445555555
Q ss_pred hcchhHHHHHHHHHHHhhcchHHHHHHHHHhHHHHHHH---HHHhhhh
Q 033132 81 GYAKFYFFDLVAGFFLFDYNKFSCFYSFTCGIYCVTVL---VIIKDVV 125 (126)
Q Consensus 81 G~~~~~~~~~~~~~~gl~~tsa~~a~ii~~~~Pv~~~l---~~~~~~~ 125 (126)
+ ..++.+++.|++++++++++++..+.|+++.+ +.+|||.
T Consensus 80 ~-----~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~ 122 (256)
T TIGR00688 80 I-----GFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERI 122 (256)
T ss_pred H-----HHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 4 68999999999999999999999999999998 5568885
No 4
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=99.51 E-value=1.9e-13 Score=105.53 Aligned_cols=115 Identities=4% Similarity=-0.196 Sum_probs=90.1
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCC--C-CCCHHHHHHHHHHHHh
Q 033132 4 VGLAPVIGMMMAECAQVGLMFAGKAAMSDGMSNLVFVFYSNAFASLVLLPASLLFHRSQI--P-PLTLPILSAFFLLGFL 80 (126)
Q Consensus 4 ~~~~~~l~ll~~~~~wg~~~v~~k~~l~~g~~p~~l~~~R~~~A~l~L~~~~~~~~r~~~--~-~~~~~~~~~l~llg~~ 80 (126)
++.+.++.++++.++||.+++..|.. + ++||.++.++|+.++.+++.++...+++++. + ..+++++ .....|.+
T Consensus 5 ~~~~g~~~~l~a~~~wg~~~~~~k~~-~-~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 81 (296)
T PRK15430 5 QTRQGVLLALAAYFIWGIAPAYFKLI-Y-YVPADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKI-FMLAVSAV 81 (296)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHh-c-CCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHH-HHHHHHHH
Confidence 45688999999999999999999975 5 4999999999999999888776544321110 0 1133443 23446777
Q ss_pred hcchhHHHHHHHHHHHhhcchHHHHHHHHHhHHHHHHH---HHHhhhh
Q 033132 81 GYAKFYFFDLVAGFFLFDYNKFSCFYSFTCGIYCVTVL---VIIKDVV 125 (126)
Q Consensus 81 G~~~~~~~~~~~~~~gl~~tsa~~a~ii~~~~Pv~~~l---~~~~~~~ 125 (126)
+. ..++.+++.|++++++++++++..+.|+++.+ +++|||.
T Consensus 82 ~~----~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~ 125 (296)
T PRK15430 82 LI----GGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERF 125 (296)
T ss_pred HH----HHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 77 88999999999999999999999999999998 4558874
No 5
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=99.47 E-value=1.4e-12 Score=100.55 Aligned_cols=110 Identities=7% Similarity=-0.083 Sum_probs=92.5
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHhhc
Q 033132 3 KVGLAPVIGMMMAECAQVGLMFAGKAAMSDGMSNLVFVFYSNAFASLVLLPASLLFHRSQIPPLTLPILSAFFLLGFLGY 82 (126)
Q Consensus 3 ~~~~~~~l~ll~~~~~wg~~~v~~k~~l~~g~~p~~l~~~R~~~A~l~L~~~~~~~~r~~~~~~~~~~~~~l~llg~~G~ 82 (126)
.++.+++..++++.++|+.+.+++|.++++ +||..+.++|+.+|+++++++.. .+++ +.++|++......|++.
T Consensus 8 ~~~~~~~~~~~la~~~~~~~~~~~K~~~~~-~~~~~~~~~R~~~a~l~l~~~~~--~~~~--~~~~~~~~~~~~~g~~~- 81 (293)
T PRK10532 8 LPVWLPILLLLIAMASIQSGASLAKSLFPL-VGAPGVTALRLALGTLILIAIFK--PWRL--RFAKEQRLPLLFYGVSL- 81 (293)
T ss_pred cccchHHHHHHHHHHHHHhhHHHHHHHHHH-cCHHHHHHHHHHHHHHHHHHHHh--HHhc--cCCHHHHHHHHHHHHHH-
Confidence 356789999999999999999999999987 99999999999999999887632 2221 24567888888888865
Q ss_pred chhHHHHHHHHHHHhhcchHHHHHHHHHhHHHHHHHHHHh
Q 033132 83 AKFYFFDLVAGFFLFDYNKFSCFYSFTCGIYCVTVLVIIK 122 (126)
Q Consensus 83 ~~~~~~~~~~~~~gl~~tsa~~a~ii~~~~Pv~~~l~~~~ 122 (126)
...+.+++.|+++++++.++++..+.|+++.++.-+
T Consensus 82 ----~~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~~~ 117 (293)
T PRK10532 82 ----GGMNYLFYLSIQTVPLGIAVALEFTGPLAVALFSSR 117 (293)
T ss_pred ----HHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhcC
Confidence 466788999999999999999999999999987643
No 6
>PRK11689 aromatic amino acid exporter; Provisional
Probab=99.47 E-value=7.9e-13 Score=102.02 Aligned_cols=109 Identities=9% Similarity=-0.040 Sum_probs=84.5
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHhhcch
Q 033132 5 GLAPVIGMMMAECAQVGLMFAGKAAMSDGMSNLVFVFYSNAFASLVLLPASLLFHRSQIPPLTLPILSAFFLLGFLGYAK 84 (126)
Q Consensus 5 ~~~~~l~ll~~~~~wg~~~v~~k~~l~~g~~p~~l~~~R~~~A~l~L~~~~~~~~r~~~~~~~~~~~~~l~llg~~G~~~ 84 (126)
|.++++.++.+.++||.+++..|.++++ +||..+.++|+.+|++++.++. .+++.+ ++ .++..+.|.++.
T Consensus 2 ~~~~~l~~l~a~~~Wg~~~~~~k~~~~~-~~P~~~~~~R~~~a~l~l~~~~---~~~~~~---~~-~~~~~~~~~l~~-- 71 (295)
T PRK11689 2 SQKATLIGLIAILLWSTMVGLIRGVSES-LGPVGGAAMIYSVSGLLLLLTV---GFPRLR---QF-PKRYLLAGGLLF-- 71 (295)
T ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHcc-CChHHHHHHHHHHHHHHHHHHc---cccccc---cc-cHHHHHHHhHHH--
Confidence 4567888999999999999999999886 9999999999999999988752 121111 11 223445566666
Q ss_pred hHHHHHHHHHHHhhc----chHHHHHHHHHhHHHHHHH---HHHhhhh
Q 033132 85 FYFFDLVAGFFLFDY----NKFSCFYSFTCGIYCVTVL---VIIKDVV 125 (126)
Q Consensus 85 ~~~~~~~~~~~gl~~----tsa~~a~ii~~~~Pv~~~l---~~~~~~~ 125 (126)
..++.+++.|++| +++++++++.++.|+++.+ +..|||.
T Consensus 72 --~~~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~ 117 (295)
T PRK11689 72 --VSYEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKA 117 (295)
T ss_pred --HHHHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCc
Confidence 7888888888864 5788899999999999988 4568874
No 7
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=99.40 E-value=1.8e-12 Score=86.34 Aligned_cols=102 Identities=17% Similarity=0.203 Sum_probs=87.4
Q ss_pred HHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHhhcchhHHHHHHHHHHH
Q 033132 17 CAQVGLMFAGKAAMSDGMSNLVFVFYSNAFASLVLLPASLLFHRSQIPPLTLPILSAFFLLGFLGYAKFYFFDLVAGFFL 96 (126)
Q Consensus 17 ~~wg~~~v~~k~~l~~g~~p~~l~~~R~~~A~l~L~~~~~~~~r~~~~~~~~~~~~~l~llg~~G~~~~~~~~~~~~~~g 96 (126)
++||.+.+..|...++ +||....++|+..+.+ +.++....++++.++.+.+++......|.++. ...+.+++.|
T Consensus 1 ~~~a~~~~~~k~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~a 74 (126)
T PF00892_consen 1 FSWAIYSVFSKKLLKK-ISPLSITFWRFLIAGI-LLILLLILGRKPFKNLSPRQWLWLLFLGLLGT----ALAYLLYFYA 74 (126)
T ss_pred ceeeeHHHHHHHHhcc-CCHHHHHHHHHHHHHH-HHHHHHhhccccccCCChhhhhhhhHhhccce----ehHHHHHHHH
Confidence 4799999999999887 9999999999999998 66666666655445567788899999999987 7899999999
Q ss_pred hhcchHHHHHHHHHhHHHHHHH---HHHhhh
Q 033132 97 FDYNKFSCFYSFTCGIYCVTVL---VIIKDV 124 (126)
Q Consensus 97 l~~tsa~~a~ii~~~~Pv~~~l---~~~~~~ 124 (126)
+++++++.++.+.++.|+++.+ +..+|+
T Consensus 75 ~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~ 105 (126)
T PF00892_consen 75 LKYISASIVSILQYLSPVFAAILGWLFLGER 105 (126)
T ss_pred HHhcchhHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 9999999999999999999998 445554
No 8
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=99.40 E-value=2.8e-12 Score=96.20 Aligned_cols=96 Identities=20% Similarity=0.016 Sum_probs=83.5
Q ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHhhcchhHHHHHHHHHHHhh
Q 033132 19 QVGLMFAGKAAMSDGMSNLVFVFYSNAFASLVLLPASLLFHRSQIPPLTLPILSAFFLLGFLGYAKFYFFDLVAGFFLFD 98 (126)
Q Consensus 19 wg~~~v~~k~~l~~g~~p~~l~~~R~~~A~l~L~~~~~~~~r~~~~~~~~~~~~~l~llg~~G~~~~~~~~~~~~~~gl~ 98 (126)
||.+++..|.+++++.||....+.|+..+.+++.++... | .+++++......|.++. .+++.+++.|++
T Consensus 1 Wg~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~--~-----~~~~~~~~~~~~~~~~~----~l~~~~~~~a~~ 69 (260)
T TIGR00950 1 WGTTGVVIGQYLEGQVPLYFAVFRRLIFALLLLLPLLRR--R-----PPLKRLLRLLLLGALQI----GVFYVLYFVAVK 69 (260)
T ss_pred CcchHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHh--c-----cCHhHHHHHHHHHHHHH----HHHHHHHHHHHH
Confidence 899999999999888999999999999998888875432 2 23567788889999998 899999999999
Q ss_pred cchHHHHHHHHHhHHHHHHH---HHHhhhh
Q 033132 99 YNKFSCFYSFTCGIYCVTVL---VIIKDVV 125 (126)
Q Consensus 99 ~tsa~~a~ii~~~~Pv~~~l---~~~~~~~ 125 (126)
|+++++++++.++.|+++.+ +..|||+
T Consensus 70 ~~~~~~~~ii~~~~P~~~~~~~~l~~~e~~ 99 (260)
T TIGR00950 70 RLPVGEAALLLYLAPLYVTLLSDLMGKERP 99 (260)
T ss_pred hcChhhhHHHHhhhHHHHHHHHHHHccCCC
Confidence 99999999999999999998 4677875
No 9
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=99.37 E-value=1.5e-11 Score=94.97 Aligned_cols=103 Identities=9% Similarity=0.022 Sum_probs=79.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHhhcchhHHH
Q 033132 9 VIGMMMAECAQVGLMFAGKAAMSDGMSNLVFVFYSNAFASLVLLPASLLFHRSQIPPLTLPILSAFFLLGFLGYAKFYFF 88 (126)
Q Consensus 9 ~l~ll~~~~~wg~~~v~~k~~l~~g~~p~~l~~~R~~~A~l~L~~~~~~~~r~~~~~~~~~~~~~l~llg~~G~~~~~~~ 88 (126)
.+..+.+.++||.+++++|.++++ +||..++++|+.++++.+.++. .+++ .++ ......|+++. ..
T Consensus 6 ~l~~l~~~~~Wg~~~~~~k~~~~~-~~p~~~~~~R~~~a~~~l~~~~---~~~~---~~~---~~~~~~g~~~~----~~ 71 (299)
T PRK11453 6 GVLALLVVVVWGLNFVVIKVGLHN-MPPLMLAGLRFMLVAFPAIFFV---ARPK---VPL---NLLLGYGLTIS----FG 71 (299)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHhc-CCHHHHHHHHHHHHHHHHHHHh---cCCC---Cch---HHHHHHHHHHH----HH
Confidence 466788899999999999999876 9999999999999887766542 1211 122 23445566655 56
Q ss_pred HHHHHHHHhhcc-hHHHHHHHHHhHHHHHHH---HHHhhhh
Q 033132 89 DLVAGFFLFDYN-KFSCFYSFTCGIYCVTVL---VIIKDVV 125 (126)
Q Consensus 89 ~~~~~~~gl~~t-sa~~a~ii~~~~Pv~~~l---~~~~~~~ 125 (126)
++.+++.+++|+ ++++++++.++.|+++.+ +..|||.
T Consensus 72 ~~~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~ 112 (299)
T PRK11453 72 QFAFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERL 112 (299)
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcC
Confidence 677888999985 788999999999999988 4467774
No 10
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=99.13 E-value=3.2e-09 Score=79.56 Aligned_cols=114 Identities=15% Similarity=0.078 Sum_probs=93.4
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhCCCCH--HHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHhhc
Q 033132 5 GLAPVIGMMMAECAQVGLMFAGKAAMSDGMSN--LVFVFYSNAFASLVLLPASLLFHRSQIPPLTLPILSAFFLLGFLGY 82 (126)
Q Consensus 5 ~~~~~l~ll~~~~~wg~~~v~~k~~l~~g~~p--~~l~~~R~~~A~l~L~~~~~~~~r~~~~~~~~~~~~~l~llg~~G~ 82 (126)
..+.+...+.++++|+.+.+..|...++ .|| ..+..+|+.++.+++.+..+..+++ +..+.+++..++.+|.++.
T Consensus 126 ~~~G~~~~l~a~~~~a~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 202 (260)
T TIGR00950 126 NPAGLLLGLGSGISFALGTVLYKRLVKK-EGPELLQFTGWVLLLGALLLLPFAWFLGPN--PQALSLQWGALLYLGLIGT 202 (260)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhHHhhc-CCchHHHHHHHHHHHHHHHHHHHHHhcCCC--CCcchHHHHHHHHHHHHHH
Confidence 4567888999999999999999998764 664 4566678999999998887654332 2346678888888999987
Q ss_pred chhHHHHHHHHHHHhhcchHHHHHHHHHhHHHHHHH---HHHhhhh
Q 033132 83 AKFYFFDLVAGFFLFDYNKFSCFYSFTCGIYCVTVL---VIIKDVV 125 (126)
Q Consensus 83 ~~~~~~~~~~~~~gl~~tsa~~a~ii~~~~Pv~~~l---~~~~~~~ 125 (126)
.+.+.+++.++++.+++.++.+.++.|+++++ +..+|+.
T Consensus 203 ----~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~ 244 (260)
T TIGR00950 203 ----ALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETL 244 (260)
T ss_pred ----HHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 78899999999999999999999999999998 4556653
No 11
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=99.12 E-value=3e-09 Score=82.05 Aligned_cols=98 Identities=10% Similarity=-0.026 Sum_probs=79.0
Q ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHhhcchhHHHHHHHHHHHhhcch
Q 033132 22 LMFAGKAAMSDGMSNLVFVFYSNAFASLVLLPASLLFHRSQIPPLTLPILSAFFLLGFLGYAKFYFFDLVAGFFLFDYNK 101 (126)
Q Consensus 22 ~~v~~k~~l~~g~~p~~l~~~R~~~A~l~L~~~~~~~~r~~~~~~~~~~~~~l~llg~~G~~~~~~~~~~~~~~gl~~ts 101 (126)
..+.-|.++++.-+|..+++.|+..+.+.+.+. +....+++++.+++|+.+++.+|+++ +.++.+.+.|++|+|
T Consensus 17 ~~~~NK~~l~~~~~P~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~-----~~~~~~~~~~l~~~s 90 (302)
T TIGR00817 17 FNIYNKKLLNVFPYPYFKTLISLAVGSLYCLLS-WSSGLPKRLKISSALLKLLLPVAIVH-----TIGHVTSNVSLSKVA 90 (302)
T ss_pred HHHHHHHHHhhCChhHHHHHHHHHHHHHHHHHH-HHhCCCCCCCCCHHHHHHHHHHHHHH-----HHHHHHHHHHHHhcc
Confidence 345789999876789999999999998776654 22222334456789999999999997 477899999999999
Q ss_pred HHHHHHHHHhHHHHHHH---HHHhhhh
Q 033132 102 FSCFYSFTCGIYCVTVL---VIIKDVV 125 (126)
Q Consensus 102 a~~a~ii~~~~Pv~~~l---~~~~~~~ 125 (126)
+++++++.+++|+++.+ +..|||.
T Consensus 91 ~s~~~li~~~~Pv~~~ll~~~~~~e~~ 117 (302)
T TIGR00817 91 VSFTHTIKAMEPFFSVVLSAFFLGQEF 117 (302)
T ss_pred HHHHHHHHhcchHHHHHHHHHHhCCCC
Confidence 99999999999999988 5557764
No 12
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=99.00 E-value=1.8e-08 Score=79.90 Aligned_cols=97 Identities=14% Similarity=0.116 Sum_probs=74.7
Q ss_pred HHHHHHHHHhCCCC-HHHHHHHHHHHHHHHHHHHHHHHhhcCCCCC--CHHHHHHHHHHHHhhcchhHHHHHHHHHHHhh
Q 033132 22 LMFAGKAAMSDGMS-NLVFVFYSNAFASLVLLPASLLFHRSQIPPL--TLPILSAFFLLGFLGYAKFYFFDLVAGFFLFD 98 (126)
Q Consensus 22 ~~v~~k~~l~~g~~-p~~l~~~R~~~A~l~L~~~~~~~~r~~~~~~--~~~~~~~l~llg~~G~~~~~~~~~~~~~~gl~ 98 (126)
..+..|.++++ +| |.+++.+|+++++++...+ +....++.|+. .++++..++.+|+++. .. +...+.|++
T Consensus 64 ~~~~nK~vl~~-~~~P~~l~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~llp~gl~~~----~~-~~~~~~sl~ 136 (350)
T PTZ00343 64 YVVDNKLALNM-LPLPWTISSLQLFVGWLFALLY-WATGFRKIPRIKSLKLFLKNFLPQGLCHL----FV-HFGAVISMG 136 (350)
T ss_pred HHHHHHHHHHh-CChhHHHHHHHHHHHHHHHHHH-HHhCCCCCCCCCCHHHHHHHHHHHHHHHH----HH-HHHHHHHHh
Confidence 34578999987 99 9999999999998765544 22222223334 2457889999999997 55 444679999
Q ss_pred cchHHHHHHHHHhHHHHHHH---HHHhhhh
Q 033132 99 YNKFSCFYSFTCGIYCVTVL---VIIKDVV 125 (126)
Q Consensus 99 ~tsa~~a~ii~~~~Pv~~~l---~~~~~~~ 125 (126)
+++++++.++.++.|+++++ +..|||.
T Consensus 137 ~~svs~~~iika~~Pvft~lls~~~l~ek~ 166 (350)
T PTZ00343 137 LGAVSFTHVVKAAEPVFTALLSILFLKQFL 166 (350)
T ss_pred hccHHHHHHHHHhhHHHHHHHHHHHhCCCc
Confidence 99999999999999999998 4567763
No 13
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=98.87 E-value=1.1e-07 Score=71.24 Aligned_cols=118 Identities=19% Similarity=0.168 Sum_probs=87.8
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHhh
Q 033132 2 GKVGLAPVIGMMMAECAQVGLMFAGKAAMSDGMSNLVFVFYSNAFASLVLLPASLLFHRSQIPPLTLPILSAFFLLGFLG 81 (126)
Q Consensus 2 ~~~~~~~~l~ll~~~~~wg~~~v~~k~~l~~g~~p~~l~~~R~~~A~l~L~~~~~~~~r~~~~~~~~~~~~~l~llg~~G 81 (126)
+++........+...+.|+.+....|...+...++....+.|+..+..++.+.... ++.+.++ ..+++....+.+.++
T Consensus 2 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~ 79 (292)
T COG0697 2 KRALLLGLLALLLWGLLWGLSFIALKLAVESLDPFLFAAALRFLIAALLLLPLLLL-EPRGLRP-ALRPWLLLLLLALLG 79 (292)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHh-hcccccc-cccchHHHHHHHHHH
Confidence 34455667777888899999999999987654677777777999998884443221 1111222 223355677777888
Q ss_pred cchhHHHHHHHHHHHhhcchHHHHHHHHHhHHHHHHHHH---H-hhhh
Q 033132 82 YAKFYFFDLVAGFFLFDYNKFSCFYSFTCGIYCVTVLVI---I-KDVV 125 (126)
Q Consensus 82 ~~~~~~~~~~~~~~gl~~tsa~~a~ii~~~~Pv~~~l~~---~-~~~~ 125 (126)
. ..++.+++.+++++++++++.+.++.|+++.++. + +||.
T Consensus 80 ~----~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~ 123 (292)
T COG0697 80 L----ALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERL 123 (292)
T ss_pred H----HHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCC
Confidence 7 8999999999999999999999999999999965 2 7764
No 14
>COG2510 Predicted membrane protein [Function unknown]
Probab=98.84 E-value=2.3e-08 Score=69.09 Aligned_cols=109 Identities=13% Similarity=0.030 Sum_probs=91.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCC-CCCHHHHHHHHHHHHhhcchhHHH
Q 033132 10 IGMMMAECAQVGLMFAGKAAMSDGMSNLVFVFYSNAFASLVLLPASLLFHRSQIP-PLTLPILSAFFLLGFLGYAKFYFF 88 (126)
Q Consensus 10 l~ll~~~~~wg~~~v~~k~~l~~g~~p~~l~~~R~~~A~l~L~~~~~~~~r~~~~-~~~~~~~~~l~llg~~G~~~~~~~ 88 (126)
...++++++||...+++|..+++ +||..-++.|-.....++..+.+...+.+.+ ..+.|.|..+.+-|+-|. .
T Consensus 6 ~~ALLsA~fa~L~~iF~KIGl~~-vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~g-----l 79 (140)
T COG2510 6 IYALLSALFAGLTPIFAKIGLEG-VDPDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAGG-----L 79 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHhccc-cCccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHHH-----H
Confidence 45567889999999999999875 9999999999999999988887765544433 357888888888887774 7
Q ss_pred HHHHHHHHhhcchHHHHHHHHHhHHHHHHH---HHHhhh
Q 033132 89 DLVAGFFLFDYNKFSCFYSFTCGIYCVTVL---VIIKDV 124 (126)
Q Consensus 89 ~~~~~~~gl~~tsa~~a~ii~~~~Pv~~~l---~~~~~~ 124 (126)
.-.+||.+++...|+...-+-.+.|+++++ ++++|+
T Consensus 80 swl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ 118 (140)
T COG2510 80 SWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGER 118 (140)
T ss_pred HHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCC
Confidence 789999999999999999999999999988 566775
No 15
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=98.83 E-value=8.3e-08 Score=73.49 Aligned_cols=109 Identities=8% Similarity=0.168 Sum_probs=81.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHh-hcCCCCCCHHHHHHHHHHHHhhcchhHH
Q 033132 9 VIGMMMAECAQVGLMFAGKAAMSDGMSNLVFVFYSNAFASLVLLPASLLFH-RSQIPPLTLPILSAFFLLGFLGYAKFYF 87 (126)
Q Consensus 9 ~l~ll~~~~~wg~~~v~~k~~l~~g~~p~~l~~~R~~~A~l~L~~~~~~~~-r~~~~~~~~~~~~~l~llg~~G~~~~~~ 87 (126)
.+..++++++|+...+.+|...++ -++ ..++++..+++++.|+...+. ++++++.++ +++...+++.++. .
T Consensus 3 ~~~~~~aa~~~a~~~~~~k~~~~~-~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~----~ 74 (281)
T TIGR03340 3 LTLVVFSALMHAGWNLMAKSHADK-EPD--FLWWALLAHSVLLTPYGLWYLAQVGWSRLPA-TFWLLLAISAVAN----M 74 (281)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCc-hhH--HHHHHHHHHHHHHHHHHHHhcccCCCCCcch-hhHHHHHHHHHHH----H
Confidence 456788999999999999966554 344 458888888888888765532 233343343 4455556666666 7
Q ss_pred HHHHHHHHHhhcchHHHHHHHHHhHHHHHHH---HHHhhhh
Q 033132 88 FDLVAGFFLFDYNKFSCFYSFTCGIYCVTVL---VIIKDVV 125 (126)
Q Consensus 88 ~~~~~~~~gl~~tsa~~a~ii~~~~Pv~~~l---~~~~~~~ 125 (126)
.++.+++.|++++++++++.+.++.|+++.+ +..+|+.
T Consensus 75 ~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~ 115 (281)
T TIGR03340 75 VYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETL 115 (281)
T ss_pred HHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCC
Confidence 9999999999999999999999999999988 5567764
No 16
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=98.67 E-value=1.3e-06 Score=67.43 Aligned_cols=111 Identities=11% Similarity=0.081 Sum_probs=85.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHhhcchh
Q 033132 6 LAPVIGMMMAECAQVGLMFAGKAAMSDGMSNLVFVFYSNAFASLVLLPASLLFHRSQIPPLTLPILSAFFLLGFLGYAKF 85 (126)
Q Consensus 6 ~~~~l~ll~~~~~wg~~~v~~k~~l~~g~~p~~l~~~R~~~A~l~L~~~~~~~~r~~~~~~~~~~~~~l~llg~~G~~~~ 85 (126)
....+..+.++++|+...+..|...++ .+|...... ..++++++.|+....+. ....+...+..++.+|+++.
T Consensus 147 ~~G~ll~l~aa~~~a~~~v~~r~~~~~-~~~~~~~~~-~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~l~lgv~~t--- 219 (293)
T PRK10532 147 LTGAALALGAGACWAIYILSGQRAGAE-HGPATVAIG-SLIAALIFVPIGALQAG--EALWHWSILPLGLAVAILST--- 219 (293)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcc-CCchHHHHH-HHHHHHHHHHHHHHccC--cccCCHHHHHHHHHHHHHHH---
Confidence 457788999999999999999998654 888877544 45666777776654322 12234555666678899888
Q ss_pred HHHHHHHHHHHhhcchHHHHHHHHHhHHHHHHH---HHHhhh
Q 033132 86 YFFDLVAGFFLFDYNKFSCFYSFTCGIYCVTVL---VIIKDV 124 (126)
Q Consensus 86 ~~~~~~~~~~gl~~tsa~~a~ii~~~~Pv~~~l---~~~~~~ 124 (126)
.+.+.+++.++++.+|++++.+..+.|++..+ +.+.|+
T Consensus 220 -~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~ 260 (293)
T PRK10532 220 -ALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGET 260 (293)
T ss_pred -HHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCC
Confidence 78888999999999999999999999999988 445554
No 17
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=98.59 E-value=2.3e-06 Score=65.94 Aligned_cols=113 Identities=19% Similarity=0.016 Sum_probs=89.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHhhcchh
Q 033132 6 LAPVIGMMMAECAQVGLMFAGKAAMSDGMSNLVFVFYSNAFASLVLLPASLLFHRSQIPPLTLPILSAFFLLGFLGYAKF 85 (126)
Q Consensus 6 ~~~~l~ll~~~~~wg~~~v~~k~~l~~g~~p~~l~~~R~~~A~l~L~~~~~~~~r~~~~~~~~~~~~~l~llg~~G~~~~ 85 (126)
....+..+.++++|+...+..|..- . -++.....++..+++.++.++....+.......+.++|..+..+|+++.
T Consensus 149 ~~G~l~~l~a~~~~a~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~i~~s--- 223 (292)
T PRK11272 149 PWGAILILIASASWAFGSVWSSRLP-L-PVGMMAGAAEMLAAGVVLLIASLLSGERLTALPTLSGFLALGYLAVFGS--- 223 (292)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhcC-C-CcchHHHHHHHHHHHHHHHHHHHHcCCcccccCCHHHHHHHHHHHHHHH---
Confidence 4577888899999999999999863 3 3456677899999988888876554322111235677888999999988
Q ss_pred HHHHHHHHHHHhhcchHHHHHHHHHhHHHHHHH---HHHhhh
Q 033132 86 YFFDLVAGFFLFDYNKFSCFYSFTCGIYCVTVL---VIIKDV 124 (126)
Q Consensus 86 ~~~~~~~~~~gl~~tsa~~a~ii~~~~Pv~~~l---~~~~~~ 124 (126)
.+...+++.++++.++++++.+..+.|++.++ ++.+|+
T Consensus 224 -~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~ 264 (292)
T PRK11272 224 -IIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGET 264 (292)
T ss_pred -HHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 78888999999999999999999999999998 455664
No 18
>PRK11689 aromatic amino acid exporter; Provisional
Probab=98.42 E-value=9.6e-06 Score=62.60 Aligned_cols=109 Identities=9% Similarity=0.048 Sum_probs=78.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHhhcchh
Q 033132 6 LAPVIGMMMAECAQVGLMFAGKAAMSDGMSNLVFVFYSNAFASLVLLPASLLFHRSQIPPLTLPILSAFFLLGFLGYAKF 85 (126)
Q Consensus 6 ~~~~l~ll~~~~~wg~~~v~~k~~l~~g~~p~~l~~~R~~~A~l~L~~~~~~~~r~~~~~~~~~~~~~l~llg~~G~~~~ 85 (126)
...++..+.++++|+...+..|...+ +.+|..... ..+.+.+.+.... +.......+.+.+..++..|+ ..
T Consensus 155 ~~G~~~~l~aa~~~A~~~v~~k~~~~-~~~~~~~~~---~~~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~~~-~t--- 225 (295)
T PRK11689 155 PLSYGLAFIGAFIWAAYCNVTRKYAR-GKNGITLFF---ILTALALWIKYFL-SPQPAMVFSLPAIIKLLLAAA-AM--- 225 (295)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhccC-CCCchhHHH---HHHHHHHHHHHHH-hcCccccCCHHHHHHHHHHHH-HH---
Confidence 34678899999999999999999754 488876532 3344444443333 222112345667777777774 44
Q ss_pred HHHHHHHHHHHhhcchHHHHHHHHHhHHHHHHH---HHHhhh
Q 033132 86 YFFDLVAGFFLFDYNKFSCFYSFTCGIYCVTVL---VIIKDV 124 (126)
Q Consensus 86 ~~~~~~~~~~gl~~tsa~~a~ii~~~~Pv~~~l---~~~~~~ 124 (126)
.+.+.+++.++++.+|+.++.+.+..|++..+ +.+.|+
T Consensus 226 -~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~ 266 (295)
T PRK11689 226 -GFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTP 266 (295)
T ss_pred -HHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCC
Confidence 67899999999999999999999999999888 445554
No 19
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=98.35 E-value=1.2e-06 Score=58.69 Aligned_cols=80 Identities=20% Similarity=0.221 Sum_probs=62.3
Q ss_pred HHHHHHHHHHHHHHHHHHhhcC--CCCCCHHHHHHHHHHHHhhcchhHHHHHHHHHHHhhcchHHHHHHHHHhHHHHHHH
Q 033132 41 FYSNAFASLVLLPASLLFHRSQ--IPPLTLPILSAFFLLGFLGYAKFYFFDLVAGFFLFDYNKFSCFYSFTCGIYCVTVL 118 (126)
Q Consensus 41 ~~R~~~A~l~L~~~~~~~~r~~--~~~~~~~~~~~l~llg~~G~~~~~~~~~~~~~~gl~~tsa~~a~ii~~~~Pv~~~l 118 (126)
.+|...+.+++......++|.+ .+..++|++......|.+|. ..+..+++.|++++++ ..+.+.+++|+++.+
T Consensus 2 a~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~----~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~l 76 (113)
T PF13536_consen 2 AFRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGF----GVAYLLFFYALSYAPA-LVAAIFSLSPIFTAL 76 (113)
T ss_pred HHHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHH----HHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHH
Confidence 5899999999888776643321 12234456777788888886 7889999999999995 888999999999998
Q ss_pred ---HHHhhhh
Q 033132 119 ---VIIKDVV 125 (126)
Q Consensus 119 ---~~~~~~~ 125 (126)
++.|||.
T Consensus 77 l~~~~~~er~ 86 (113)
T PF13536_consen 77 LSWLFFKERL 86 (113)
T ss_pred HHHHHhcCCC
Confidence 7778874
No 20
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=98.27 E-value=6.9e-06 Score=63.34 Aligned_cols=115 Identities=13% Similarity=0.165 Sum_probs=81.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCC---------CCHHHHHH-H
Q 033132 6 LAPVIGMMMAECAQVGLMFAGKAAMSD-GMSNLVFVFYSNAFASLVLLPASLLFHRSQIPP---------LTLPILSA-F 74 (126)
Q Consensus 6 ~~~~l~ll~~~~~wg~~~v~~k~~l~~-g~~p~~l~~~R~~~A~l~L~~~~~~~~r~~~~~---------~~~~~~~~-l 74 (126)
....+..++++++|+...+..|...++ +.||..+..+....+++.+.|+....+...... ........ .
T Consensus 144 ~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (302)
T TIGR00817 144 WAGFLSAMISNITFVSRNIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVS 223 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHH
Confidence 457788899999999999999998761 499999999999999999999877654211100 00011111 2
Q ss_pred HHHHHhhcchhHHHHHHHHHHHhhcchHHHHHHHHHhHHHHHHH---HHHhhh
Q 033132 75 FLLGFLGYAKFYFFDLVAGFFLFDYNKFSCFYSFTCGIYCVTVL---VIIKDV 124 (126)
Q Consensus 75 ~llg~~G~~~~~~~~~~~~~~gl~~tsa~~a~ii~~~~Pv~~~l---~~~~~~ 124 (126)
+..+.... ...+..++.++++++|+.+++..+..|+++++ +++.|+
T Consensus 224 ~~~~~~~~----~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~ 272 (302)
T TIGR00817 224 LVAAMGFF----HFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTK 272 (302)
T ss_pred HHHHHHHH----HHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCC
Confidence 22222222 44557788999999999999999999999965 555555
No 21
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=98.23 E-value=8.1e-05 Score=57.50 Aligned_cols=115 Identities=12% Similarity=0.114 Sum_probs=82.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhCC--CCHHHHHHHHHHHHHHHHHHHHHHHhhcC-----CCCCCHHHHHHHHHHH
Q 033132 6 LAPVIGMMMAECAQVGLMFAGKAAMSDG--MSNLVFVFYSNAFASLVLLPASLLFHRSQ-----IPPLTLPILSAFFLLG 78 (126)
Q Consensus 6 ~~~~l~ll~~~~~wg~~~v~~k~~l~~g--~~p~~l~~~R~~~A~l~L~~~~~~~~r~~-----~~~~~~~~~~~l~llg 78 (126)
....+..+.++++|+...+..|...++. .+......+-..++.+.+...++..++.. ....+.+++..++.+|
T Consensus 142 ~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 221 (299)
T PRK11453 142 MLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLA 221 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHH
Confidence 3577888999999999999999875432 22234444555555444444433333221 1234667899999999
Q ss_pred HhhcchhHHHHHHHHHHHhhcchHHHHHHHHHhHHHHHHH---HHHhhh
Q 033132 79 FLGYAKFYFFDLVAGFFLFDYNKFSCFYSFTCGIYCVTVL---VIIKDV 124 (126)
Q Consensus 79 ~~G~~~~~~~~~~~~~~gl~~tsa~~a~ii~~~~Pv~~~l---~~~~~~ 124 (126)
+++. .+.+.+++.++++.+|++++.+..+.|++..+ +++.|+
T Consensus 222 i~~t----~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~ 266 (299)
T PRK11453 222 FVAT----IVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDER 266 (299)
T ss_pred HHHH----HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 9998 88899999999999999999999999999887 445554
No 22
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=98.14 E-value=0.00012 Score=58.51 Aligned_cols=110 Identities=10% Similarity=0.057 Sum_probs=78.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCH-HHHHHHHHHHHHHHHHHHHHHHhhcCCC----CCCHHHHHHHHHHHHhhc
Q 033132 8 PVIGMMMAECAQVGLMFAGKAAMSDGMSN-LVFVFYSNAFASLVLLPASLLFHRSQIP----PLTLPILSAFFLLGFLGY 82 (126)
Q Consensus 8 ~~l~ll~~~~~wg~~~v~~k~~l~~g~~p-~~l~~~R~~~A~l~L~~~~~~~~r~~~~----~~~~~~~~~l~llg~~G~ 82 (126)
..+.++.++++|+...+..|...+. .|| ...+++....+++.+.+.+...++...+ ..+.. ...++..|+. .
T Consensus 190 G~~l~l~aa~~wa~~~il~~~~~~~-~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~i~y~~i~-t 266 (358)
T PLN00411 190 GGALLTIQGIFVSVSFILQAHIMSE-YPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIHFDIT-LITIVTMAII-T 266 (358)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-cCcHhHHHHHHHHHHHHHHHHHHHHHccCCcccceeccchH-HHHHHHHHHH-H
Confidence 4567888899999999999988775 645 4677788887777776666655442211 11222 2224444443 3
Q ss_pred chhHHHHHHHHHHHhhcchHHHHHHHHHhHHHHHHH---HHHhhh
Q 033132 83 AKFYFFDLVAGFFLFDYNKFSCFYSFTCGIYCVTVL---VIIKDV 124 (126)
Q Consensus 83 ~~~~~~~~~~~~~gl~~tsa~~a~ii~~~~Pv~~~l---~~~~~~ 124 (126)
.+.+.+++.++++.+|+.++++.++.|+++++ +.+.|+
T Consensus 267 ----~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~ 307 (358)
T PLN00411 267 ----SVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDS 307 (358)
T ss_pred ----HHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCC
Confidence 56777899999999999999999999999998 445554
No 23
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=97.96 E-value=0.00011 Score=56.98 Aligned_cols=118 Identities=12% Similarity=-0.060 Sum_probs=87.1
Q ss_pred CCCcchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCC-C--CCCHHHHHHHHHH
Q 033132 1 MGKVGLAPVIGMMMAECAQVGLMFAGKAAMSDGMSNLVFVFYSNAFASLVLLPASLLFHRSQI-P--PLTLPILSAFFLL 77 (126)
Q Consensus 1 m~~~~~~~~l~ll~~~~~wg~~~v~~k~~l~~g~~p~~l~~~R~~~A~l~L~~~~~~~~r~~~-~--~~~~~~~~~l~ll 77 (126)
|+++..+.++.-+.+.++||..+...|.. ++ +|+.+....|...+..++..+....++.+. . ..++|.+..+.+.
T Consensus 1 ~~~~~~~Gil~~l~Ay~lwG~lp~y~kll-~~-~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~ 78 (293)
T COG2962 1 MAKDSRKGILLALLAYLLWGLLPLYFKLL-EP-LPATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALT 78 (293)
T ss_pred CCCcccchhHHHHHHHHHHHHHHHHHHHH-cc-CCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHH
Confidence 55555688899999999999999999964 55 999999999999998887665544332211 1 1123334444443
Q ss_pred HHhhcchhHHHHHHHHHHHhhcchHHHHHHHHHhHHHHHHH---HHHhhhh
Q 033132 78 GFLGYAKFYFFDLVAGFFLFDYNKFSCFYSFTCGIYCVTVL---VIIKDVV 125 (126)
Q Consensus 78 g~~G~~~~~~~~~~~~~~gl~~tsa~~a~ii~~~~Pv~~~l---~~~~~~~ 125 (126)
+..= +.+-..|.++.+.....++|+=...+|++.++ +.+|||.
T Consensus 79 a~li-----~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErl 124 (293)
T COG2962 79 ALLI-----GLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERL 124 (293)
T ss_pred HHHH-----HHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhc
Confidence 3332 68888899999999999998888888888877 8899974
No 24
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=97.96 E-value=0.0002 Score=55.38 Aligned_cols=105 Identities=15% Similarity=0.186 Sum_probs=73.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHhhcchhHHH
Q 033132 9 VIGMMMAECAQVGLMFAGKAAMSDGMSNLVFVFYSNAFASLVLLPASLLFHRSQIPPLTLPILSAFFLLGFLGYAKFYFF 88 (126)
Q Consensus 9 ~l~ll~~~~~wg~~~v~~k~~l~~g~~p~~l~~~R~~~A~l~L~~~~~~~~r~~~~~~~~~~~~~l~llg~~G~~~~~~~ 88 (126)
++..++++++||.+.+..|..- |.++.... |..++.+++....... |+ |+.+ .++....|+++. ..+..
T Consensus 3 ~l~~lia~~~wGs~g~~~k~~~--g~~~~~~~--~~~~g~l~~~~~~~~~-~~--~~~~---~~~~~~~g~l~G-~~w~i 71 (290)
T TIGR00776 3 ILIALIPALFWGSFVLINVKIG--GGPYSQTL--GTTFGALILSIAIAIF-VL--PEFW---ALSIFLVGLLSG-AFWAL 71 (290)
T ss_pred hHHHHHHHHHHhhhHHHHhccC--CCHHHHHH--HHHHHHHHHHHHHHHH-hC--Cccc---ccHHHHHHHHHH-HHHHh
Confidence 5667788999999999999864 68888775 8888888777665543 22 1122 234444455552 11278
Q ss_pred HHHHHHHHhhcchHHHHHHHHH-hHHHHHHH---HHHhhh
Q 033132 89 DLVAGFFLFDYNKFSCFYSFTC-GIYCVTVL---VIIKDV 124 (126)
Q Consensus 89 ~~~~~~~gl~~tsa~~a~ii~~-~~Pv~~~l---~~~~~~ 124 (126)
.|.+|+.+.++++.+.+-.+.+ +.|++..+ +..||+
T Consensus 72 g~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~ 111 (290)
T TIGR00776 72 GQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEW 111 (290)
T ss_pred hhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhc
Confidence 8999999999999999988888 66665543 556675
No 25
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=97.92 E-value=0.00062 Score=54.06 Aligned_cols=118 Identities=14% Similarity=0.146 Sum_probs=79.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhC------CCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCC--------CCCHHHH
Q 033132 6 LAPVIGMMMAECAQVGLMFAGKAAMSD------GMSNLVFVFYSNAFASLVLLPASLLFHRSQIP--------PLTLPIL 71 (126)
Q Consensus 6 ~~~~l~ll~~~~~wg~~~v~~k~~l~~------g~~p~~l~~~R~~~A~l~L~~~~~~~~r~~~~--------~~~~~~~ 71 (126)
....+..+++.++|+...+..|..+++ ..++.....+-...++++++|+....|..+.. ..+...+
T Consensus 193 ~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~ 272 (350)
T PTZ00343 193 WLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTK 272 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccch
Confidence 457788899999999999999998764 26677777777889999999987655432110 0001011
Q ss_pred HHHHHHHHhhcchhHHHHHHHHHHHhhcchHHHHHHHHHhHHHHHHH---HHHhhh
Q 033132 72 SAFFLLGFLGYAKFYFFDLVAGFFLFDYNKFSCFYSFTCGIYCVTVL---VIIKDV 124 (126)
Q Consensus 72 ~~l~llg~~G~~~~~~~~~~~~~~gl~~tsa~~a~ii~~~~Pv~~~l---~~~~~~ 124 (126)
..+....+.. ...|.+++...|.+++.++|..+++..++-|+++++ +..+|+
T Consensus 273 ~~~l~~i~~s-~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~ 327 (350)
T PTZ00343 273 GIIIFKIFFS-GVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQ 327 (350)
T ss_pred HHHHHHHHHH-HHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCC
Confidence 1111111111 122366677777899999999999999999999988 344554
No 26
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=97.83 E-value=0.0013 Score=45.38 Aligned_cols=105 Identities=15% Similarity=0.259 Sum_probs=83.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhC------CCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCC----C-------CHHHH
Q 033132 9 VIGMMMAECAQVGLMFAGKAAMSD------GMSNLVFVFYSNAFASLVLLPASLLFHRSQIPP----L-------TLPIL 71 (126)
Q Consensus 9 ~l~ll~~~~~wg~~~v~~k~~l~~------g~~p~~l~~~R~~~A~l~L~~~~~~~~r~~~~~----~-------~~~~~ 71 (126)
++..+.+.++.+...+..|..+++ +.+|..+..+-...+++++.|.....|+.+..+ . +.+.+
T Consensus 2 ~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 81 (153)
T PF03151_consen 2 FILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNFI 81 (153)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHHH
Confidence 456777888999999999998876 899999999999999999999988877654110 0 22334
Q ss_pred HHHHHHHHhhcchhHHHHHHHHHHHhhcchHHHHHHHHHhHHHHHHH
Q 033132 72 SAFFLLGFLGYAKFYFFDLVAGFFLFDYNKFSCFYSFTCGIYCVTVL 118 (126)
Q Consensus 72 ~~l~llg~~G~~~~~~~~~~~~~~gl~~tsa~~a~ii~~~~Pv~~~l 118 (126)
..++..|+++ ...+...+.-+++|||...++..+.-.+++.+
T Consensus 82 ~~~~~~~~~~-----~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~ 123 (153)
T PF03151_consen 82 FLLILSGLLA-----FLYNLSSFLLIKLTSPLTYSVLGNVKRILVIL 123 (153)
T ss_pred HHHHHHHHHH-----HHHHHHHHHHhhhcChhHHHHHHHHHHHHHHH
Confidence 5555556666 48899999999999999999888888777766
No 27
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=97.80 E-value=7.2e-05 Score=57.22 Aligned_cols=114 Identities=11% Similarity=-0.053 Sum_probs=71.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHH----HHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHhh
Q 033132 6 LAPVIGMMMAECAQVGLMFAGKAAMSDGMSNLV----FVFYSNAFASLVLLPASLLFHRSQIPPLTLPILSAFFLLGFLG 81 (126)
Q Consensus 6 ~~~~l~ll~~~~~wg~~~v~~k~~l~~g~~p~~----l~~~R~~~A~l~L~~~~~~~~r~~~~~~~~~~~~~l~llg~~G 81 (126)
.+.....+.++++|+...+..|...+ +.+|.. ...+.....++.+.+....+++ +....+.+.+......+.++
T Consensus 143 ~~g~~~~l~aal~~a~~~i~~k~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 220 (281)
T TIGR03340 143 RKAYAWALAAALGTAIYSLSDKAAAL-GVPAFYSALGYLGIGFLAMGWPFLLLYLKRHG-RSMFPYARQILPSATLGGLM 220 (281)
T ss_pred hhHHHHHHHHHHHHHHhhhhcccccc-chhcccccHHHHHHHHHHHHHHHHHHHHHHhc-cchhhhHHHHHHHHHHHHHH
Confidence 34556678888999999999997643 355532 2233333332222222221121 11111222344555666666
Q ss_pred cchhHHHHHHHHHHHhhcchHHHHHHHHHhHHHHHHHH---HHhhhh
Q 033132 82 YAKFYFFDLVAGFFLFDYNKFSCFYSFTCGIYCVTVLV---IIKDVV 125 (126)
Q Consensus 82 ~~~~~~~~~~~~~~gl~~tsa~~a~ii~~~~Pv~~~l~---~~~~~~ 125 (126)
. .+.+.+++.++++.+++.++....+.|++..++ .++|+.
T Consensus 221 s----~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~ 263 (281)
T TIGR03340 221 I----GGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERW 263 (281)
T ss_pred H----HHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCc
Confidence 5 678889999999999999999999999999984 567764
No 28
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=97.68 E-value=0.0032 Score=46.96 Aligned_cols=104 Identities=12% Similarity=0.034 Sum_probs=77.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHH-HHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHhhcch
Q 033132 6 LAPVIGMMMAECAQVGLMFAGKAAMSDGMSNLVFVF-YSNAFASLVLLPASLLFHRSQIPPLTLPILSAFFLLGFLGYAK 84 (126)
Q Consensus 6 ~~~~l~ll~~~~~wg~~~v~~k~~l~~g~~p~~l~~-~R~~~A~l~L~~~~~~~~r~~~~~~~~~~~~~l~llg~~G~~~ 84 (126)
.......+.+.+.|+.+.+..|... + .++..... +.+..+.....+. ...... .+.+.+++..+...|+++.
T Consensus 153 ~~g~~~~l~a~~~~a~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~g~~~~-- 225 (292)
T COG0697 153 LLGLLLALAAALLWALYTALVKRLS-R-LGPVTLALLLQLLLALLLLLLF--FLSGFG-APILSRAWLLLLYLGVFST-- 225 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc-C-CChHHHHHHHHHHHHHHHHHHH--Hhcccc-ccCCHHHHHHHHHHHHHHH--
Confidence 3677888999999999999999876 3 77777777 4444222222222 222111 2346678899999999997
Q ss_pred hHHHHHHHHHHHhhcchHHHHHHHHHhHHHHHHH
Q 033132 85 FYFFDLVAGFFLFDYNKFSCFYSFTCGIYCVTVL 118 (126)
Q Consensus 85 ~~~~~~~~~~~gl~~tsa~~a~ii~~~~Pv~~~l 118 (126)
...+.+++.+++..+++..+.+....|++..+
T Consensus 226 --~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 257 (292)
T COG0697 226 --GLAYLLWYYALRLLGASLVALLSLLEPVFAAL 257 (292)
T ss_pred --HHHHHHHHHHHHhcCchHHHHHHHHHHHHHHH
Confidence 77899999999999999999999999988887
No 29
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=97.57 E-value=0.0033 Score=47.24 Aligned_cols=99 Identities=14% Similarity=0.100 Sum_probs=65.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHH---HHhhcCC-CC-CCHHHHHHHHHHHHhhcchh
Q 033132 11 GMMMAECAQVGLMFAGKAAMSDGMSNLVFVFYSNAFASLVLLPASL---LFHRSQI-PP-LTLPILSAFFLLGFLGYAKF 85 (126)
Q Consensus 11 ~ll~~~~~wg~~~v~~k~~l~~g~~p~~l~~~R~~~A~l~L~~~~~---~~~r~~~-~~-~~~~~~~~l~llg~~G~~~~ 85 (126)
..+.++++|+...+..|...++ ++..... +...+.|... ....... +. ...++|..++.+|+.+
T Consensus 150 ~~l~aa~~~a~~~i~~~~~~~~--~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~t---- 218 (256)
T TIGR00688 150 EALVLAFSFTAYGLIRKALKNT--DLAGFCL-----ETLSLMPVAIYYLLQTDFATVQQTNPFPIWLLLVLAGLIT---- 218 (256)
T ss_pred HHHHHHHHHHHHHHHHhhcCCC--CcchHHH-----HHHHHHHHHHHHHHHhccCcccccCchhHHHHHHHHHHHH----
Confidence 4567889999999999986432 3322222 1222222221 1111111 11 1235788888888874
Q ss_pred HHHHHHHHHHHhhcchHHHHHHHHHhHHHHHHHHHH
Q 033132 86 YFFDLVAGFFLFDYNKFSCFYSFTCGIYCVTVLVII 121 (126)
Q Consensus 86 ~~~~~~~~~~gl~~tsa~~a~ii~~~~Pv~~~l~~~ 121 (126)
.+.+.+++.|+++.+|+.++.+.++.|++..++..
T Consensus 219 -~i~~~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~ 253 (256)
T TIGR00688 219 -GTPLLAFVIAANRLPLNLLGLLQYIGPTIMMLCVS 253 (256)
T ss_pred -HHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHH
Confidence 57899999999999999999999999999988653
No 30
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=97.40 E-value=0.0031 Score=48.77 Aligned_cols=106 Identities=10% Similarity=0.086 Sum_probs=74.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHH---HHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHhhc
Q 033132 6 LAPVIGMMMAECAQVGLMFAGKAAMSDGMSNLVFVFYSNA---FASLVLLPASLLFHRSQIPPLTLPILSAFFLLGFLGY 82 (126)
Q Consensus 6 ~~~~l~ll~~~~~wg~~~v~~k~~l~~g~~p~~l~~~R~~---~A~l~L~~~~~~~~r~~~~~~~~~~~~~l~llg~~G~ 82 (126)
.+.....+++.+.++.+.+..|.. + .||.+..+.... +++.++.+.. ++.+|. +.+.....++.|++ -
T Consensus 151 ~~Gi~~~l~sg~~y~~~~~~~~~~--~-~~~~~~~~~~~~g~~~~~~~~~~~~----~~~~~~-~~~~~~~~~~~Gi~-~ 221 (290)
T TIGR00776 151 KKGILLLLMSTIGYLVYVVVAKAF--G-VDGLSVLLPQAIGMVIGGIIFNLGH----ILAKPL-KKYAILLNILPGLM-W 221 (290)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHc--C-CCcceehhHHHHHHHHHHHHHHHHH----hcccch-HHHHHHHHHHHHHH-H
Confidence 568888899999999999999975 3 899988555554 3433333321 122232 23334444556766 4
Q ss_pred chhHHHHHHHHHHHhh-cchHHHHHHHHHhHHHHHHH---HHHhhh
Q 033132 83 AKFYFFDLVAGFFLFD-YNKFSCFYSFTCGIYCVTVL---VIIKDV 124 (126)
Q Consensus 83 ~~~~~~~~~~~~~gl~-~tsa~~a~ii~~~~Pv~~~l---~~~~~~ 124 (126)
.+.+.+|+.|++ +..++.++++.+..|+...+ +.+||+
T Consensus 222 ----~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~ 263 (290)
T TIGR00776 222 ----GIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEK 263 (290)
T ss_pred ----HHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccC
Confidence 677888999999 99999999999999998887 556665
No 31
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=97.36 E-value=0.0056 Score=48.70 Aligned_cols=113 Identities=13% Similarity=0.174 Sum_probs=73.1
Q ss_pred HHHHHHHHHH---HHHHHHHHHHHHHHhCCCC-HHHHHHHHHHHHHHHHHHHHHHHhh-cCCCCCCHHHHHHHHHHHHhh
Q 033132 7 APVIGMMMAE---CAQVGLMFAGKAAMSDGMS-NLVFVFYSNAFASLVLLPASLLFHR-SQIPPLTLPILSAFFLLGFLG 81 (126)
Q Consensus 7 ~~~l~ll~~~---~~wg~~~v~~k~~l~~g~~-p~~l~~~R~~~A~l~L~~~~~~~~r-~~~~~~~~~~~~~l~llg~~G 81 (126)
+-+..++++| ++-.++.+.++..-+.|.+ |..-.++-+..-.++..+....+++ +++.+..+++|++.+++|++-
T Consensus 10 ~~~~~~~lgQ~lsl~~~~t~~~s~~l~~~~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~y~lla~~D 89 (334)
T PF06027_consen 10 RFWIVLLLGQVLSLCITGTGTFSSLLANKGVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWKYFLLALLD 89 (334)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHhcCccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHHHHHHHHHHH
Confidence 3444444444 4456666666665566677 6655555555545554444333322 222333456788889999988
Q ss_pred cchhHHHHHHHHHHHhhcchHHHHHHHHHhHHHHHHH---HHHhhh
Q 033132 82 YAKFYFFDLVAGFFLFDYNKFSCFYSFTCGIYCVTVL---VIIKDV 124 (126)
Q Consensus 82 ~~~~~~~~~~~~~~gl~~tsa~~a~ii~~~~Pv~~~l---~~~~~~ 124 (126)
+ ..+++...|.+|||.+.+.++.+..-.++++ +++|||
T Consensus 90 v-----~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~r 130 (334)
T PF06027_consen 90 V-----EANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRR 130 (334)
T ss_pred H-----HHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhh
Confidence 6 6688999999999999999888766555554 667776
No 32
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=97.33 E-value=0.007 Score=46.67 Aligned_cols=109 Identities=10% Similarity=-0.016 Sum_probs=67.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCC-CCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHhhcchhHHH
Q 033132 10 IGMMMAECAQVGLMFAGKAAMSDG-MSNLVFVFYSNAFASLVLLPASLLFHRSQIPPLTLPILSAFFLLGFLGYAKFYFF 88 (126)
Q Consensus 10 l~ll~~~~~wg~~~v~~k~~l~~g-~~p~~l~~~R~~~A~l~L~~~~~~~~r~~~~~~~~~~~~~l~llg~~G~~~~~~~ 88 (126)
...+.++++|+.+.+..|...++. .++.....+-..++...+.+.... ............+..+...|..+ .+
T Consensus 152 ~~~l~aa~~~a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~t-----~i 225 (296)
T PRK15430 152 IIALGLAFSFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYLFAIADS-STSHMGQNPMSLNLLLIAAGIVT-----TV 225 (296)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHccC-CcccccCCcHHHHHHHHHHHHHH-----HH
Confidence 346677899999999999864321 233444444444444433322110 00001111122234445555543 57
Q ss_pred HHHHHHHHhhcchHHHHHHHHHhHHHHHHH---HHHhhh
Q 033132 89 DLVAGFFLFDYNKFSCFYSFTCGIYCVTVL---VIIKDV 124 (126)
Q Consensus 89 ~~~~~~~gl~~tsa~~a~ii~~~~Pv~~~l---~~~~~~ 124 (126)
.+.+++.++++.+|+.++.+....|++..+ +++.|+
T Consensus 226 ~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~ 264 (296)
T PRK15430 226 PLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEK 264 (296)
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 889999999999999999999999999988 456665
No 33
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=97.29 E-value=0.0042 Score=47.84 Aligned_cols=107 Identities=12% Similarity=0.010 Sum_probs=81.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHhhcchhHH
Q 033132 8 PVIGMMMAECAQVGLMFAGKAAMSDGMSNLVFVFYSNAFASLVLLPASLLFHRSQIPPLTLPILSAFFLLGFLGYAKFYF 87 (126)
Q Consensus 8 ~~l~ll~~~~~wg~~~v~~k~~l~~g~~p~~l~~~R~~~A~l~L~~~~~~~~r~~~~~~~~~~~~~l~llg~~G~~~~~~ 87 (126)
|++.++.+...-=...-++|..... ++|-..+.+|..++++++.++..- ++ ++.+++++..+...|..-.
T Consensus 13 p~~~ll~amvsiq~Gas~Ak~LFP~-vG~~g~t~lRl~~aaLIll~l~RP--wr--~r~~~~~~~~~~~yGvsLg----- 82 (292)
T COG5006 13 PILALLVAMVSIQSGASFAKSLFPL-VGAAGVTALRLAIAALILLALFRP--WR--RRLSKPQRLALLAYGVSLG----- 82 (292)
T ss_pred cHHHHHHHHHHHHhhHHHHHHHccc-cChhhHHHHHHHHHHHHHHHHhhH--HH--hccChhhhHHHHHHHHHHH-----
Confidence 5666666654444444566777776 999999999999999999886322 22 3467788888888777653
Q ss_pred HHHHHHHHHhhcchHHHHHHHHHhHHHHHHHHHHhhh
Q 033132 88 FDLVAGFFLFDYNKFSCFYSFTCGIYCVTVLVIIKDV 124 (126)
Q Consensus 88 ~~~~~~~~gl~~tsa~~a~ii~~~~Pv~~~l~~~~~~ 124 (126)
..|..+|.+++...=+.+..+-.+-|+....+--|+.
T Consensus 83 ~MNl~FY~si~riPlGiAVAiEF~GPL~vA~~~sRr~ 119 (292)
T COG5006 83 GMNLLFYLSIERIPLGIAVAIEFTGPLAVALLSSRRL 119 (292)
T ss_pred HHHHHHHHHHHhccchhhhhhhhccHHHHHHHhccch
Confidence 5588899999999999998999999999888766553
No 34
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=96.63 E-value=0.035 Score=44.23 Aligned_cols=107 Identities=7% Similarity=-0.052 Sum_probs=71.8
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHH-HHHHHHHHhhc
Q 033132 4 VGLAPVIGMMMAECAQVGLMFAGKAAMSDGMSNLVFVFYSNAFASLVLLPASLLFHRSQIPPLTLPIL-SAFFLLGFLGY 82 (126)
Q Consensus 4 ~~~~~~l~ll~~~~~wg~~~v~~k~~l~~g~~p~~l~~~R~~~A~l~L~~~~~~~~r~~~~~~~~~~~-~~l~llg~~G~ 82 (126)
++.+..++.+.+++++|.+.+..|..+++ .|+..+...=-+.+.++..+.....||++....++..- ..+++...++.
T Consensus 165 ~~i~GDll~l~~a~lya~~nV~~E~~v~~-~~~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~~w~~~~~~~~v~~~~~l 243 (334)
T PF06027_consen 165 NPILGDLLALLGAILYAVSNVLEEKLVKK-APRVEFLGMLGLFGFIISGIQLAILERSGIESIHWTSQVIGLLVGYALCL 243 (334)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHhccc-CCHHHHHHHHHHHHHHHHHHHHHheehhhhhccCCChhhHHHHHHHHHHH
Confidence 56788999999999999999999999886 89988887777777887777777778876654433221 11222222222
Q ss_pred chhHHHHHHHHHHHhhcchHHHHHHHHHhHHHH
Q 033132 83 AKFYFFDLVAGFFLFDYNKFSCFYSFTCGIYCV 115 (126)
Q Consensus 83 ~~~~~~~~~~~~~gl~~tsa~~a~ii~~~~Pv~ 115 (126)
+....+.-..+++++|+...+=..++...
T Consensus 244 ----f~~y~l~p~~l~~ssAt~~nLsLLTsd~~ 272 (334)
T PF06027_consen 244 ----FLFYSLVPIVLRMSSATFFNLSLLTSDFY 272 (334)
T ss_pred ----HHHHHHHHHHHHhCccceeehHHHHhhHH
Confidence 34444556788999988555333333333
No 35
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=96.14 E-value=0.00044 Score=53.65 Aligned_cols=99 Identities=13% Similarity=0.224 Sum_probs=66.9
Q ss_pred HHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCC-CCCCHHHHHHHHHHHHhhcchhHHHHHHHHHH
Q 033132 17 CAQVGLMFAGKAAMSDGMSNLVFVFYSNAFASLVLLPASLLFHRSQI-PPLTLPILSAFFLLGFLGYAKFYFFDLVAGFF 95 (126)
Q Consensus 17 ~~wg~~~v~~k~~l~~g~~p~~l~~~R~~~A~l~L~~~~~~~~r~~~-~~~~~~~~~~l~llg~~G~~~~~~~~~~~~~~ 95 (126)
..+....++.+..++ .+|......|+..-.++-.|........-+ |+ ..| .++++=|+.|. +. ....|+
T Consensus 47 ~ff~~~~vv~t~~~e--~~p~e~a~~r~l~~mlit~pcliy~~~~v~gp~-g~R--~~LiLRg~mG~----tg-vmlmyy 116 (346)
T KOG4510|consen 47 YFFNSCMVVSTKVLE--NDPMELASFRLLVRMLITYPCLIYYMQPVIGPE-GKR--KWLILRGFMGF----TG-VMLMYY 116 (346)
T ss_pred HHHhhHHHhhhhhhc--cChhHhhhhhhhhehhhhheEEEEEeeeeecCC-CcE--EEEEeehhhhh----hH-HHHHHH
Confidence 666667777776653 899999999987777777776544221111 22 222 22333445553 22 345568
Q ss_pred HhhcchHHHHHHHHHhHHHHHHH---HHHhhhh
Q 033132 96 LFDYNKFSCFYSFTCGIYCVTVL---VIIKDVV 125 (126)
Q Consensus 96 gl~~tsa~~a~ii~~~~Pv~~~l---~~~~~~~ 125 (126)
+++|-|-+.|++|+..+|++|.+ +++|||-
T Consensus 117 a~~~mslaDA~vItFssPvft~ifaw~~LkE~~ 149 (346)
T KOG4510|consen 117 ALMYMSLADAVVITFSSPVFTIIFAWAFLKEPF 149 (346)
T ss_pred HHhhcchhheEEEEecChHHHHHHHHHHHcCCC
Confidence 99999999999999999999999 6788873
No 36
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=94.76 E-value=0.78 Score=35.60 Aligned_cols=110 Identities=12% Similarity=0.037 Sum_probs=84.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHhhcchhHH
Q 033132 8 PVIGMMMAECAQVGLMFAGKAAMSDGMSNLVFVFYSNAFASLVLLPASLLFHRSQIPPLTLPILSAFFLLGFLGYAKFYF 87 (126)
Q Consensus 8 ~~l~ll~~~~~wg~~~v~~k~~l~~g~~p~~l~~~R~~~A~l~L~~~~~~~~r~~~~~~~~~~~~~l~llg~~G~~~~~~ 87 (126)
.....+.+..+|+.+-+.+|.+=+. .+.-.=+..-+.+|+++..|+....-.. .-.+...+..-+..|+++. .
T Consensus 149 Gv~~Al~AG~~Wa~YIv~G~r~g~~-~~g~~g~a~gm~vAaviv~Pig~~~ag~--~l~~p~ll~laLgvavlSS----a 221 (292)
T COG5006 149 GVALALGAGACWALYIVLGQRAGRA-EHGTAGVAVGMLVAALIVLPIGAAQAGP--ALFSPSLLPLALGVAVLSS----A 221 (292)
T ss_pred HHHHHHHHhHHHHHHHHHcchhccc-CCCchHHHHHHHHHHHHHhhhhhhhcch--hhcChHHHHHHHHHHHHhc----c
Confidence 4455667789999999999987543 5556677888999999999987643221 1234555666677788887 7
Q ss_pred HHHHHHHHHhhcchHHHHHHHHHhHHHHHHH---HHHhhh
Q 033132 88 FDLVAGFFLFDYNKFSCFYSFTCGIYCVTVL---VIIKDV 124 (126)
Q Consensus 88 ~~~~~~~~gl~~tsa~~a~ii~~~~Pv~~~l---~~~~~~ 124 (126)
+-..+...+++.-++..-+.+.++.|.+-.+ ++++|.
T Consensus 222 lPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ 261 (292)
T COG5006 222 LPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGET 261 (292)
T ss_pred cchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCC
Confidence 7788888999999999999999999999887 555553
No 37
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=94.01 E-value=2.1 Score=33.09 Aligned_cols=85 Identities=20% Similarity=0.179 Sum_probs=60.6
Q ss_pred HHHHHhCCCC--HHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHhhcchhHHHHHHHHHHHhhcchHH
Q 033132 26 GKAAMSDGMS--NLVFVFYSNAFASLVLLPASLLFHRSQIPPLTLPILSAFFLLGFLGYAKFYFFDLVAGFFLFDYNKFS 103 (126)
Q Consensus 26 ~k~~l~~g~~--p~~l~~~R~~~A~l~L~~~~~~~~r~~~~~~~~~~~~~l~llg~~G~~~~~~~~~~~~~~gl~~tsa~ 103 (126)
-|....++-+ |..+++.++..+.+.-.+.....++++ .+++.+......+++- .+.+.+.+.+++|.+-.
T Consensus 20 E~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~-----~~~~~~~~~al~~i~~p 91 (303)
T PF08449_consen 20 EKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKFPK---SRKIPLKKYAILSFLF-----FLASVLSNAALKYISYP 91 (303)
T ss_pred HHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhccccC---CCcChHHHHHHHHHHH-----HHHHHHHHHHHHhCChH
Confidence 3333334455 889999999998887666544332122 2334456667777666 47788889999999999
Q ss_pred HHHHHHHhHHHHHHH
Q 033132 104 CFYSFTCGIYCVTVL 118 (126)
Q Consensus 104 ~a~ii~~~~Pv~~~l 118 (126)
.-.++-++.|+.+++
T Consensus 92 ~~~~~ks~~~i~vmi 106 (303)
T PF08449_consen 92 TQIVFKSSKPIPVMI 106 (303)
T ss_pred HHHHHhhhHHHHHHH
Confidence 999999999999987
No 38
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=93.69 E-value=2.4 Score=32.69 Aligned_cols=107 Identities=16% Similarity=0.130 Sum_probs=80.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHHHHh---hcCC-C--CCCHHHHHHHHHHHHh
Q 033132 8 PVIGMMMAECAQVGLMFAGKAAMS-DGMSNLVFVFYSNAFASLVLLPASLLFH---RSQI-P--PLTLPILSAFFLLGFL 80 (126)
Q Consensus 8 ~~l~ll~~~~~wg~~~v~~k~~l~-~g~~p~~l~~~R~~~A~l~L~~~~~~~~---r~~~-~--~~~~~~~~~l~llg~~ 80 (126)
.+.+++++.++-|...+..+...+ .+.+|....++-..++.+...+.....+ -++. + ..+++.+..+++.++.
T Consensus 155 G~~ll~~sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~~ 234 (303)
T PF08449_consen 155 GIILLLLSLLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSLT 234 (303)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHHH
Confidence 778899999999999999998885 6899999999999999888877665521 1110 0 1123355667777777
Q ss_pred hcchhHHHHHHHHHHHhhcchHHHHHHHHHhHHHHHHHH
Q 033132 81 GYAKFYFFDLVAGFFLFDYNKFSCFYSFTCGIYCVTVLV 119 (126)
Q Consensus 81 G~~~~~~~~~~~~~~gl~~tsa~~a~ii~~~~Pv~~~l~ 119 (126)
|. ..|.+.+.-.+.++|...+++.++--.+++++
T Consensus 235 ~~-----~g~~~i~~~~~~~~al~~t~v~t~Rk~~sill 268 (303)
T PF08449_consen 235 GA-----LGQFFIFYLIKKFSALTTTIVTTLRKFLSILL 268 (303)
T ss_pred HH-----HHHHHHHHHHHhcCchhhhhHHHHHHHHHHHH
Confidence 75 55667777789999999999999888877763
No 39
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=93.13 E-value=0.57 Score=38.09 Aligned_cols=114 Identities=11% Similarity=-0.002 Sum_probs=82.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHh-C--CCCHHHHHHHHHHHHHHHHHHHHHHHhhcCC---CCCCHHHHHHHHHHHH
Q 033132 6 LAPVIGMMMAECAQVGLMFAGKAAMS-D--GMSNLVFVFYSNAFASLVLLPASLLFHRSQI---PPLTLPILSAFFLLGF 79 (126)
Q Consensus 6 ~~~~l~ll~~~~~wg~~~v~~k~~l~-~--g~~p~~l~~~R~~~A~l~L~~~~~~~~r~~~---~~~~~~~~~~l~llg~ 79 (126)
....+..+++++.||...+..|.=.+ + .+|--.+-.+=-++..++++|..+...+-++ +-++..+...+++.|+
T Consensus 246 llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~F~lP~~~q~~~vv~~~l 325 (416)
T KOG2765|consen 246 LLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEERFELPSSTQFSLVVFNNL 325 (416)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCcccCCCCceeEeeeHhhH
Confidence 56788889999999999999887555 3 3666666666777788888887665443222 2334456677888999
Q ss_pred hhcchhHHHHHHHHHHHhhcchHHHHHHHHH-hHHHHHHH-HHHhh
Q 033132 80 LGYAKFYFFDLVAGFFLFDYNKFSCFYSFTC-GIYCVTVL-VIIKD 123 (126)
Q Consensus 80 ~G~~~~~~~~~~~~~~gl~~tsa~~a~ii~~-~~Pv~~~l-~~~~~ 123 (126)
+|. ...-+++..|.-.||+..+++=.+ .+|+-++. ..+|+
T Consensus 326 igt----vvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~ 367 (416)
T KOG2765|consen 326 IGT----VVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKG 367 (416)
T ss_pred HHH----HHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcC
Confidence 999 999999999999999988774333 33665554 44444
No 40
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=92.14 E-value=2.3 Score=28.30 Aligned_cols=47 Identities=11% Similarity=0.088 Sum_probs=38.7
Q ss_pred HHHHHhhcchhHHHHHHHHHHHhhcchHHHHHHHHHhHHHHHHH---HHHhhhh
Q 033132 75 FLLGFLGYAKFYFFDLVAGFFLFDYNKFSCFYSFTCGIYCVTVL---VIIKDVV 125 (126)
Q Consensus 75 ~llg~~G~~~~~~~~~~~~~~gl~~tsa~~a~ii~~~~Pv~~~l---~~~~~~~ 125 (126)
..+++.++ .....+...+++..+.+.+..+.++.|+.+.+ +..+|++
T Consensus 40 ~~~~~~~~----~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~l 89 (111)
T PRK15051 40 LGLALACL----GLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPV 89 (111)
T ss_pred HHHHHHHH----HHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 33444666 78899999999999999999999999999988 6677764
No 41
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=90.41 E-value=1.6 Score=34.63 Aligned_cols=91 Identities=18% Similarity=0.107 Sum_probs=67.9
Q ss_pred HHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHhhcchhHHHHHHHHHHHhhcch
Q 033132 24 FAGKAAMS--DGMSNLVFVFYSNAFASLVLLPASLLFHRSQIPPLTLPILSAFFLLGFLGYAKFYFFDLVAGFFLFDYNK 101 (126)
Q Consensus 24 v~~k~~l~--~g~~p~~l~~~R~~~A~l~L~~~~~~~~r~~~~~~~~~~~~~l~llg~~G~~~~~~~~~~~~~~gl~~ts 101 (126)
+..|..++ +.--|.+++..+.+.+.+..+..-.+..++..+..++..+..++-+|++- ++...+-..++++.+
T Consensus 34 ~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~~~~~~~~~~llpl~~~~-----~~~~v~~n~Sl~~v~ 108 (316)
T KOG1441|consen 34 ILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPSKISSKLPLRTLLPLGLVF-----CISHVLGNVSLSYVP 108 (316)
T ss_pred EeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCccccccchHHHHHHHHHH-----HHHHHhcchhhhccc
Confidence 36788888 77778899999887777776665433322222222345677778778776 477888899999999
Q ss_pred HHHHHHHHHhHHHHHHHH
Q 033132 102 FSCFYSFTCGIYCVTVLV 119 (126)
Q Consensus 102 a~~a~ii~~~~Pv~~~l~ 119 (126)
.+-.-.+=++.|.+++++
T Consensus 109 VsF~q~iKa~~P~~tvl~ 126 (316)
T KOG1441|consen 109 VSFYQTIKALMPPFTVLL 126 (316)
T ss_pred hhHHHHHHhhcchhHHHH
Confidence 999999999999999983
No 42
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=90.29 E-value=4.4 Score=27.83 Aligned_cols=95 Identities=17% Similarity=0.126 Sum_probs=63.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHhhcchhHH
Q 033132 8 PVIGMMMAECAQVGLMFAGKAAMSDGMSNLVFVFYSNAFASLVLLPASLLFHRSQIPPLTLPILSAFFLLGFLGYAKFYF 87 (126)
Q Consensus 8 ~~l~ll~~~~~wg~~~v~~k~~l~~g~~p~~l~~~R~~~A~l~L~~~~~~~~r~~~~~~~~~~~~~l~llg~~G~~~~~~ 87 (126)
.|+.++++.++-+...+.-|.++++ .++...... . . .. .+.- .+ -...+.+|+.+. .
T Consensus 3 ~~~~i~~sv~l~~~gQl~~K~g~~~-~g~~~~~~~-~-~------~~--~~~~-----~~---p~~~i~lgl~~~----~ 59 (129)
T PRK02971 3 GYLWGLASVLLASVAQLSLKWGMSR-LPLLSHAWD-F-I------AA--LLAF-----GL---ALRAVLLGLAGY----A 59 (129)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhh-CCCccchhH-H-H------HH--HHHH-----hc---cHHHHHHHHHHH----H
Confidence 5778888888888888999998875 443332211 0 0 00 0000 00 122466777777 8
Q ss_pred HHHHHHHHHhhcchHHHHHHHHHhHHHHHHH-----HHHhhhh
Q 033132 88 FDLVAGFFLFDYNKFSCFYSFTCGIYCVTVL-----VIIKDVV 125 (126)
Q Consensus 88 ~~~~~~~~gl~~tsa~~a~ii~~~~Pv~~~l-----~~~~~~~ 125 (126)
+...++..+++..+++.+.-+.+..|+.+.+ +.++|++
T Consensus 60 la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~l 102 (129)
T PRK02971 60 LSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETF 102 (129)
T ss_pred HHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 8899999999999999999999999876644 2567875
No 43
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=89.36 E-value=3.6 Score=31.92 Aligned_cols=107 Identities=11% Similarity=0.033 Sum_probs=64.3
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHH-HHHHHhhcCCCCCCHHHHHHHHHHHHhhcc
Q 033132 5 GLAPVIGMMMAECAQVGLMFAGKAAMSDGMSNLVFVFYSNAFASLVLLP-ASLLFHRSQIPPLTLPILSAFFLLGFLGYA 83 (126)
Q Consensus 5 ~~~~~l~ll~~~~~wg~~~v~~k~~l~~g~~p~~l~~~R~~~A~l~L~~-~~~~~~r~~~~~~~~~~~~~l~llg~~G~~ 83 (126)
..|....++.+.+.+....++.|.. ++||....+=+ .++-++-.. +....+++ ..+++.+.. .+-|++=
T Consensus 136 ~~kgi~~Ll~stigy~~Y~~~~~~~---~~~~~~~~lPq-aiGm~i~a~i~~~~~~~~---~~~k~~~~n-il~G~~w-- 205 (269)
T PF06800_consen 136 MKKGILALLISTIGYWIYSVIPKAF---HVSGWSAFLPQ-AIGMLIGAFIFNLFSKKP---FFEKKSWKN-ILTGLIW-- 205 (269)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHhc---CCChhHhHHHH-HHHHHHHHHHHhhccccc---ccccchHHh-hHHHHHH--
Confidence 3567889999999999999999873 37887666544 333222111 11111111 122222222 3333332
Q ss_pred hhHHHHHHHHHHHhhcchHHHHHHHHHhHHHHHHH---HHHhhh
Q 033132 84 KFYFFDLVAGFFLFDYNKFSCFYSFTCGIYCVTVL---VIIKDV 124 (126)
Q Consensus 84 ~~~~~~~~~~~~gl~~tsa~~a~ii~~~~Pv~~~l---~~~~~~ 124 (126)
...+.+++.+.+.-..+.+-.+.-+..++..+ +++||+
T Consensus 206 ---~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~ 246 (269)
T PF06800_consen 206 ---GIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEK 246 (269)
T ss_pred ---HHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEec
Confidence 46677888888888777777777777766665 666665
No 44
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=87.40 E-value=13 Score=29.56 Aligned_cols=93 Identities=18% Similarity=0.151 Sum_probs=68.3
Q ss_pred HHHHHHHHHHHhCCCCHHHHH--HHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHhhcchhHHHHHHHHHHHh
Q 033132 20 VGLMFAGKAAMSDGMSNLVFV--FYSNAFASLVLLPASLLFHRSQIPPLTLPILSAFFLLGFLGYAKFYFFDLVAGFFLF 97 (126)
Q Consensus 20 g~~~v~~k~~l~~g~~p~~l~--~~R~~~A~l~L~~~~~~~~r~~~~~~~~~~~~~l~llg~~G~~~~~~~~~~~~~~gl 97 (126)
-...++-|.++...=-|..+. .++.....+.+...-....- +.|++++++....+-+.++-+ ...+.-..++
T Consensus 25 ~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv-~~~~l~~~~~kk~~P~~~lf~-----~~i~t~~~sl 98 (314)
T KOG1444|consen 25 ILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGLV-NFRPLDLRTAKKWFPVSLLFV-----GMLFTGSKSL 98 (314)
T ss_pred HHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhcee-ecCCcChHHHHHHccHHHHHH-----HHHHHccccc
Confidence 344567788888533344444 48999888887775433221 235677888888888777764 6677788899
Q ss_pred hcchHHHHHHHHHhHHHHHHH
Q 033132 98 DYNKFSCFYSFTCGIYCVTVL 118 (126)
Q Consensus 98 ~~tsa~~a~ii~~~~Pv~~~l 118 (126)
+|-+-..-+++=+.+|+++++
T Consensus 99 k~lnVpm~tv~kn~tii~~ai 119 (314)
T KOG1444|consen 99 KYLNVPMFTVFKNLTIILTAI 119 (314)
T ss_pred cccCchHHHHHhhchHHHHHH
Confidence 999999999999999999987
No 45
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=85.41 E-value=9.9 Score=26.29 Aligned_cols=78 Identities=22% Similarity=0.185 Sum_probs=51.6
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHhhcchhHHHHHHHHHHHhhcchHHHHHHHHHhHHH
Q 033132 35 SNLVFVFYSNAFASLVLLPASLLFHRSQIPPLTLPILSAFFLLGFLGYAKFYFFDLVAGFFLFDYNKFSCFYSFTCGIYC 114 (126)
Q Consensus 35 ~p~~l~~~R~~~A~l~L~~~~~~~~r~~~~~~~~~~~~~l~llg~~G~~~~~~~~~~~~~~gl~~tsa~~a~ii~~~~Pv 114 (126)
||..-++.-+..+++++..+....++++.+..+.-+| +..+-|++|. .+-.........-.++++....-.-=+
T Consensus 29 s~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~~~p~-w~~lGG~lG~-----~~V~~~~~~vp~lG~~~~~~l~~~GQl 102 (138)
T PF04657_consen 29 SPLVASFISFGVGFILLLIILLITGRPSLASLSSVPW-WAYLGGLLGV-----FFVLSNIILVPRLGAALTTILIVAGQL 102 (138)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHhcccccchhccCCh-HHhccHHHHH-----HHHHHHHHHhhhhhHHHHHHHHHHHHH
Confidence 5999999999999999888777665543333322233 3344688885 566667777788888877655554444
Q ss_pred HHHH
Q 033132 115 VTVL 118 (126)
Q Consensus 115 ~~~l 118 (126)
+..+
T Consensus 103 ~~sl 106 (138)
T PF04657_consen 103 IASL 106 (138)
T ss_pred HHHH
Confidence 4433
No 46
>PRK13499 rhamnose-proton symporter; Provisional
Probab=83.98 E-value=21 Score=28.76 Aligned_cols=47 Identities=15% Similarity=-0.023 Sum_probs=34.2
Q ss_pred hHHHHHHHHHHHHHHHHH-------HHHHHHHhCCCCHHHHHHHHHH---HHHHHHH
Q 033132 6 LAPVIGMMMAECAQVGLM-------FAGKAAMSDGMSNLVFVFYSNA---FASLVLL 52 (126)
Q Consensus 6 ~~~~l~ll~~~~~wg~~~-------v~~k~~l~~g~~p~~l~~~R~~---~A~l~L~ 52 (126)
.|....++++.+..+..+ +..+.+.+.|.||.....-.+. ++..+.-
T Consensus 173 ~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~~~~~~~lp~~~~~~~G~~~~n 229 (345)
T PRK13499 173 KKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALGVDPLYAALPSYVVIMGGGAITN 229 (345)
T ss_pred HhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHH
Confidence 567778888888888888 6777766678999877777776 5554443
No 47
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=83.72 E-value=0.79 Score=35.99 Aligned_cols=98 Identities=8% Similarity=0.043 Sum_probs=63.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCHHH----HHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHhhcchh
Q 033132 10 IGMMMAECAQVGLMFAGKAAMSDGMSNLV----FVFYSNAFASLVLLPASLLFHRSQIPPLTLPILSAFFLLGFLGYAKF 85 (126)
Q Consensus 10 l~ll~~~~~wg~~~v~~k~~l~~g~~p~~----l~~~R~~~A~l~L~~~~~~~~r~~~~~~~~~~~~~l~llg~~G~~~~ 85 (126)
.+.+.+++.-+..+++.|+. ....+.+. +...-...+.+.+..+ ..-++| ..+||++.+..+|.+|.
T Consensus 194 ~aai~s~lf~asvyIilR~i-Gk~~h~~msvsyf~~i~lV~s~I~~~~i----g~~~lP-~cgkdr~l~~~lGvfgf--- 264 (346)
T KOG4510|consen 194 VAAISSVLFGASVYIILRYI-GKNAHAIMSVSYFSLITLVVSLIGCASI----GAVQLP-HCGKDRWLFVNLGVFGF--- 264 (346)
T ss_pred HHHHHhHhhhhhHHHHHHHh-hccccEEEEehHHHHHHHHHHHHHHhhc----cceecC-ccccceEEEEEehhhhh---
Confidence 34444555556667776654 22233332 3333333333333222 223445 46789999999999994
Q ss_pred HHHHHHHHHHHhhcchHHHHHHHHHhHHHHHHH
Q 033132 86 YFFDLVAGFFLFDYNKFSCFYSFTCGIYCVTVL 118 (126)
Q Consensus 86 ~~~~~~~~~~gl~~tsa~~a~ii~~~~Pv~~~l 118 (126)
+.|.+...|+|.--|.-.+++..+--++.+.
T Consensus 265 --igQIllTm~lQiErAGpvaim~~~dvvfAf~ 295 (346)
T KOG4510|consen 265 --IGQILLTMGLQIERAGPVAIMTYTDVVFAFF 295 (346)
T ss_pred --HHHHHHHHHhhhhccCCeehhhHHHHHHHHH
Confidence 8999999999999999999888887777665
No 48
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=83.01 E-value=22 Score=28.28 Aligned_cols=97 Identities=14% Similarity=0.256 Sum_probs=69.5
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHH---hCCCCHHHHHHHHHHHHHHHHH-HHHHHHhhcCC---C--CCCHHHHHHHH
Q 033132 5 GLAPVIGMMMAECAQVGLMFAGKAAM---SDGMSNLVFVFYSNAFASLVLL-PASLLFHRSQI---P--PLTLPILSAFF 75 (126)
Q Consensus 5 ~~~~~l~ll~~~~~wg~~~v~~k~~l---~~g~~p~~l~~~R~~~A~l~L~-~~~~~~~r~~~---~--~~~~~~~~~l~ 75 (126)
++...+....+.+..+.-.+..|..+ ++.+|++.+..+---.+...++ |+....|..+. - ..+.. .....
T Consensus 161 n~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~-~~~~~ 239 (316)
T KOG1441|consen 161 NLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVT-FLILL 239 (316)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchh-hHHHH
Confidence 34566677777788888899999988 4569999999999999999999 88777655442 1 12222 33344
Q ss_pred HHHHhhcchhHHHHHHHHHHHhhcchHHHHHH
Q 033132 76 LLGFLGYAKFYFFDLVAGFFLFDYNKFSCFYS 107 (126)
Q Consensus 76 llg~~G~~~~~~~~~~~~~~gl~~tsa~~a~i 107 (126)
+.+.+. ...|...|.-+..|||..-++
T Consensus 240 ~~sv~~-----f~~Nls~f~~ig~tSalT~~V 266 (316)
T KOG1441|consen 240 LNSVLA-----FLLNLSAFLVIGRTSALTYSV 266 (316)
T ss_pred HHHHHH-----HHHHHHHHHHHcccCchhhhh
Confidence 444444 577888899999999986553
No 49
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=74.01 E-value=27 Score=27.85 Aligned_cols=91 Identities=15% Similarity=0.021 Sum_probs=55.5
Q ss_pred HHHHHHHHHHHh---CCCC----HHHHHHHHHHHHHHHHHHHHHHHhhcCCCC---------------CCHHHHHHHHHH
Q 033132 20 VGLMFAGKAAMS---DGMS----NLVFVFYSNAFASLVLLPASLLFHRSQIPP---------------LTLPILSAFFLL 77 (126)
Q Consensus 20 g~~~v~~k~~l~---~g~~----p~~l~~~R~~~A~l~L~~~~~~~~r~~~~~---------------~~~~~~~~l~ll 77 (126)
..|.+.+|.+-+ +|-| |+..+..-|+.-+++++.+...+.|.+.+. .+...+..=.++
T Consensus 16 s~Ntl~aKwadsi~~eg~pgfqhpvlqal~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~p~lfl~Pal~ 95 (372)
T KOG3912|consen 16 SFNTLVAKWADSIQAEGSPGFQHPVLQALLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFNPVLFLPPALC 95 (372)
T ss_pred cHHHHHHHHHHhhhhhCCCccccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCCCcceecChHHH
Confidence 457778888633 4555 777777777777899988877776654321 111111112333
Q ss_pred HHhhcchhHHHHHHHHHHHhhcchHHHHHHHHHhHHHHHHH
Q 033132 78 GFLGYAKFYFFDLVAGFFLFDYNKFSCFYSFTCGIYCVTVL 118 (126)
Q Consensus 78 g~~G~~~~~~~~~~~~~~gl~~tsa~~a~ii~~~~Pv~~~l 118 (126)
-+.| ....|.|+.+|+|+.---+-...-+|+.+
T Consensus 96 Di~g--------sslm~vgL~lTsASsfQMlRGaviIFvgl 128 (372)
T KOG3912|consen 96 DIAG--------SSLMYVGLNLTSASSFQMLRGAVIIFVGL 128 (372)
T ss_pred HHhh--------hHHHHHHHHHhhHHHHHHhhcchhhhhHH
Confidence 3444 45567999999999765555555555544
No 50
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=72.29 E-value=8.8 Score=31.43 Aligned_cols=36 Identities=6% Similarity=0.069 Sum_probs=32.6
Q ss_pred HHHHHHHHHHhhcchHHHHHHHHHhHHHHHHHHHHh
Q 033132 87 FFDLVAGFFLFDYNKFSCFYSFTCGIYCVTVLVIIK 122 (126)
Q Consensus 87 ~~~~~~~~~gl~~tsa~~a~ii~~~~Pv~~~l~~~~ 122 (126)
+..++++..+|++|+.+..+++.++.-.||..+...
T Consensus 170 F~anl~~naALa~TsVAS~TilSStSs~FtL~la~i 205 (416)
T KOG2765|consen 170 FLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAI 205 (416)
T ss_pred HHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHH
Confidence 678999999999999999999999999999987653
No 51
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=70.16 E-value=56 Score=26.37 Aligned_cols=113 Identities=9% Similarity=0.054 Sum_probs=73.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCC---CCHHHHHHHHHHHHHHHHHHHHHHHhhc---CC-CCC------CHHHHHH
Q 033132 7 APVIGMMMAECAQVGLMFAGKAAMSDG---MSNLVFVFYSNAFASLVLLPASLLFHRS---QI-PPL------TLPILSA 73 (126)
Q Consensus 7 ~~~l~ll~~~~~wg~~~v~~k~~l~~g---~~p~~l~~~R~~~A~l~L~~~~~~~~r~---~~-~~~------~~~~~~~ 73 (126)
.-++.++...+.+++.....|.+-..+ ..|-+.++.-=.+-.++.....+..+|+ +. ..+ .+++...
T Consensus 15 ~k~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk 94 (345)
T KOG2234|consen 15 MKYLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLK 94 (345)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHH
Confidence 457788888899999999999987666 6677777777777776666665554322 11 112 2333344
Q ss_pred HHHHHHhhcchhHHHHHHHHHHHhhcchHHHHHHHHHhHHHHHHH---HHHhhh
Q 033132 74 FFLLGFLGYAKFYFFDLVAGFFLFDYNKFSCFYSFTCGIYCVTVL---VIIKDV 124 (126)
Q Consensus 74 l~llg~~G~~~~~~~~~~~~~~gl~~tsa~~a~ii~~~~Pv~~~l---~~~~~~ 124 (126)
..+=++ .|++++.++|.++.+-+|+...+...+-=.-|++ +++++|
T Consensus 95 ~~vPa~-----iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rk 143 (345)
T KOG2234|consen 95 VSVPAL-----IYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRK 143 (345)
T ss_pred HHHHHH-----HHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhh
Confidence 443333 3478889999999999988776555443333333 445554
No 52
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=70.16 E-value=14 Score=25.03 Aligned_cols=89 Identities=16% Similarity=0.029 Sum_probs=52.2
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHhhcchhHHHHHHH
Q 033132 13 MMAECAQVGLMFAGKAAMSDGMSNLVFVFYSNAFASLVLLPASLLFHRSQIPPLTLPILSAFFLLGFLGYAKFYFFDLVA 92 (126)
Q Consensus 13 l~~~~~wg~~~v~~k~~l~~g~~p~~l~~~R~~~A~l~L~~~~~~~~r~~~~~~~~~~~~~l~llg~~G~~~~~~~~~~~ 92 (126)
+++.++||.+..+.|.+-+. .++..-.. |..-....+ + .++|.+. ++.-. -.....
T Consensus 2 l~Vg~~WG~Tnpfik~g~~~-~~~~~~~~-~~~~~~~~L-----l--------~n~~y~i-----pf~lN----q~GSv~ 57 (113)
T PF10639_consen 2 LLVGILWGCTNPFIKRGSSG-LEKVKASL-QLLQEIKFL-----L--------LNPKYII-----PFLLN----QSGSVL 57 (113)
T ss_pred eeehHHhcCchHHHHHHHhh-cCCccchH-HHHHHHHHH-----H--------HhHHHHH-----HHHHH----HHHHHH
Confidence 45788999999999998664 66654431 321111110 0 1122211 22222 344667
Q ss_pred HHHHhhcchHHHHHHH-HHhHHHHHHH--HHHhhhh
Q 033132 93 GFFLFDYNKFSCFYSF-TCGIYCVTVL--VIIKDVV 125 (126)
Q Consensus 93 ~~~gl~~tsa~~a~ii-~~~~Pv~~~l--~~~~~~~ 125 (126)
|+..+..++-|.+.-+ +++.=++|++ ..+.|++
T Consensus 58 f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~ 93 (113)
T PF10639_consen 58 FFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEV 93 (113)
T ss_pred HHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcc
Confidence 7888998888888766 4677777777 4455543
No 53
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=62.45 E-value=6.9 Score=29.61 Aligned_cols=35 Identities=6% Similarity=-0.207 Sum_probs=31.3
Q ss_pred HHHHHHHHHHhhcchHHHHHHHHHhHHHHHHHHHH
Q 033132 87 FFDLVAGFFLFDYNKFSCFYSFTCGIYCVTVLVII 121 (126)
Q Consensus 87 ~~~~~~~~~gl~~tsa~~a~ii~~~~Pv~~~l~~~ 121 (126)
+..++.|..+++..||+.++.+.+++-.++.++++
T Consensus 64 t~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~ 98 (290)
T KOG4314|consen 64 TGANYLYLLALKKISASDASAIFACNAAFVFILAI 98 (290)
T ss_pred ecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHH
Confidence 46688999999999999999999999999988654
No 54
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=62.11 E-value=74 Score=24.84 Aligned_cols=98 Identities=10% Similarity=0.018 Sum_probs=55.1
Q ss_pred CCCcchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcC-CCCCCHHHHHHHHHHHH
Q 033132 1 MGKVGLAPVIGMMMAECAQVGLMFAGKAAMSDGMSNLVFVFYSNAFASLVLLPASLLFHRSQ-IPPLTLPILSAFFLLGF 79 (126)
Q Consensus 1 m~~~~~~~~l~ll~~~~~wg~~~v~~k~~l~~g~~p~~l~~~R~~~A~l~L~~~~~~~~r~~-~~~~~~~~~~~l~llg~ 79 (126)
||.+...+....+.++++-+......|.+... .+. ... +++++ ++-.+.+.|+ .|+
T Consensus 1 ~~~~~~iGv~lav~ss~~~~~g~~lqk~~~~r-~~~---~~~---------------~~~~~~~~~l~~~~W~----~G~ 57 (300)
T PF05653_consen 1 MNTDFYIGVLLAVVSSIFIAVGFNLQKKSHLR-LPR---GSL---------------RAGSGGRSYLRRPLWW----IGL 57 (300)
T ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhc---ccc---------------cccchhhHHHhhHHHH----HHH
Confidence 67777777778888888888889888887553 111 000 00000 0111122233 333
Q ss_pred hhcchhHHHHHHHHHHHhhcchHHHHHHHHHhHHHHHHH---HHHhhhh
Q 033132 80 LGYAKFYFFDLVAGFFLFDYNKFSCFYSFTCGIYCVTVL---VIIKDVV 125 (126)
Q Consensus 80 ~G~~~~~~~~~~~~~~gl~~tsa~~a~ii~~~~Pv~~~l---~~~~~~~ 125 (126)
.-. ...+...+.++.+.+++..+-+.+..=++..+ ..++||.
T Consensus 58 ~~~----~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~ 102 (300)
T PF05653_consen 58 LLM----VLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKL 102 (300)
T ss_pred HHH----hcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccc
Confidence 333 44556667888888888776555555444444 5566664
No 55
>PRK13499 rhamnose-proton symporter; Provisional
Probab=53.73 E-value=1.2e+02 Score=24.49 Aligned_cols=29 Identities=10% Similarity=0.052 Sum_probs=25.6
Q ss_pred CCCcchHHHHHHHHHHHHHHHHHHHHHHH
Q 033132 1 MGKVGLAPVIGMMMAECAQVGLMFAGKAA 29 (126)
Q Consensus 1 m~~~~~~~~l~ll~~~~~wg~~~v~~k~~ 29 (126)
|+++-...++..+++.++||..++..|..
T Consensus 1 m~~~~~~G~~~~~i~~~~~GS~~~p~K~~ 29 (345)
T PRK13499 1 MSNAIILGIIWHLIGGASSGSFYAPFKKV 29 (345)
T ss_pred CCchhHHHHHHHHHHHHHhhccccccccc
Confidence 66677788999999999999999999984
No 56
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=49.81 E-value=76 Score=24.40 Aligned_cols=30 Identities=7% Similarity=-0.125 Sum_probs=25.8
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHhCC
Q 033132 4 VGLAPVIGMMMAECAQVGLMFAGKAAMSDG 33 (126)
Q Consensus 4 ~~~~~~l~ll~~~~~wg~~~v~~k~~l~~g 33 (126)
+|.....+.+++.+++|.+++-.++..+++
T Consensus 180 ~RivG~~LAv~aGvlyGs~fvPv~Yi~~~~ 209 (254)
T PF07857_consen 180 KRIVGIILAVFAGVLYGSNFVPVIYIQDHP 209 (254)
T ss_pred chhHhHHHHHHHHHHHhcccchHHHHHhCc
Confidence 567778888889999999999999998764
No 57
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=44.46 E-value=1.1e+02 Score=22.32 Aligned_cols=16 Identities=6% Similarity=0.277 Sum_probs=7.1
Q ss_pred HHHHHHHHHHHHHHHH
Q 033132 9 VIGMMMAECAQVGLMF 24 (126)
Q Consensus 9 ~l~ll~~~~~wg~~~v 24 (126)
...+++.+++.|..+.
T Consensus 113 i~tli~~~i~~G~~~~ 128 (206)
T PF06570_consen 113 IITLILVSIVGGLVFY 128 (206)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3444444444444443
No 58
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=44.21 E-value=16 Score=28.75 Aligned_cols=95 Identities=11% Similarity=0.120 Sum_probs=58.1
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHhhcch
Q 033132 5 GLAPVIGMMMAECAQVGLMFAGKAAMSDGMSNLVFVFYSNAFASLVLLPASLLFHRSQIPPLTLPILSAFFLLGFLGYAK 84 (126)
Q Consensus 5 ~~~~~l~ll~~~~~wg~~~v~~k~~l~~g~~p~~l~~~R~~~A~l~L~~~~~~~~r~~~~~~~~~~~~~l~llg~~G~~~ 84 (126)
..+....++.++.+++.+.+.-.....+ .|...+...=-++++++ ..+-...+|++...++|..-....+...+++
T Consensus 164 p~~GD~lvi~GATlYaVSNv~EEflvkn-~d~~elm~~lgLfGaII-saIQ~i~~~~~~~tl~w~~~i~~yl~f~L~M-- 239 (336)
T KOG2766|consen 164 PVKGDFLVIAGATLYAVSNVSEEFLVKN-ADRVELMGFLGLFGAII-SAIQFIFERHHVSTLHWDSAIFLYLRFALTM-- 239 (336)
T ss_pred CccCcEEEEecceeeeeccccHHHHHhc-CcHHHHHHHHHHHHHHH-HHHHHhhhccceeeEeehHHHHHHHHHHHHH--
Confidence 3456667778888999999998887776 88888887777776665 3334566776655555432122222234444
Q ss_pred hHHHHHHHHHHHhhcchHHHH
Q 033132 85 FYFFDLVAGFFLFDYNKFSCF 105 (126)
Q Consensus 85 ~~~~~~~~~~~gl~~tsa~~a 105 (126)
++..-+.-.=++.++|+..
T Consensus 240 --FllYsl~pil~k~~~aT~~ 258 (336)
T KOG2766|consen 240 --FLLYSLAPILIKTNSATMF 258 (336)
T ss_pred --HHHHHhhHHheecCCceEE
Confidence 3333333345666666643
No 59
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=32.49 E-value=2.6e+02 Score=22.34 Aligned_cols=95 Identities=14% Similarity=0.109 Sum_probs=61.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHHHHhhc-----CCC-CCCHHHHHHHHHHHH
Q 033132 7 APVIGMMMAECAQVGLMFAGKAAMS-DGMSNLVFVFYSNAFASLVLLPASLLFHRS-----QIP-PLTLPILSAFFLLGF 79 (126)
Q Consensus 7 ~~~l~ll~~~~~wg~~~v~~k~~l~-~g~~p~~l~~~R~~~A~l~L~~~~~~~~r~-----~~~-~~~~~~~~~l~llg~ 79 (126)
.+|..+....+.-....+..|+-++ .+.+-+.+.+|-.+++.+.+..+.+..+.. +.+ ..+..-+..+.+-++
T Consensus 157 ~gY~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~~~~~~~~~lScv 236 (314)
T KOG1444|consen 157 RGYSWALANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSDSSVLVVMLLSCV 236 (314)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccchhHHHHHHHHHH
Confidence 3567777777777788888888777 468888999999999999888877554321 111 112233555666666
Q ss_pred hhcchhHHHHHHHHHHHhhcchHHHHH
Q 033132 80 LGYAKFYFFDLVAGFFLFDYNKFSCFY 106 (126)
Q Consensus 80 ~G~~~~~~~~~~~~~~gl~~tsa~~a~ 106 (126)
+|. .-.++-+...+.+||+.-+
T Consensus 237 ~gf-----~isy~s~~ct~~~SAtT~t 258 (314)
T KOG1444|consen 237 MGF-----GISYTSFLCTRVNSATTTT 258 (314)
T ss_pred HHH-----HHHHHHHHHHhhcccccee
Confidence 665 3355566666666665444
No 60
>PF06691 DUF1189: Protein of unknown function (DUF1189); InterPro: IPR009574 This family consists of several hypothetical bacterial proteins of around 260 residues in length. The function of this family is unknown.
Probab=32.29 E-value=2.2e+02 Score=21.32 Aligned_cols=68 Identities=12% Similarity=0.092 Sum_probs=38.1
Q ss_pred HHHHHHHHHhhcCCCCCCHHHHHHHHHHHHhhcchhHHH-HHHHHHHHhhcchHHHHHHHHHhHHHHHHHHHHhhh
Q 033132 50 VLLPASLLFHRSQIPPLTLPILSAFFLLGFLGYAKFYFF-DLVAGFFLFDYNKFSCFYSFTCGIYCVTVLVIIKDV 124 (126)
Q Consensus 50 ~L~~~~~~~~r~~~~~~~~~~~~~l~llg~~G~~~~~~~-~~~~~~~gl~~tsa~~a~ii~~~~Pv~~~l~~~~~~ 124 (126)
++..+..+..|....+++.++.+++...+..=. ++ ..... .++..-+ ....+.....++...+++||.
T Consensus 181 i~A~ig~i~~~~~~~~lsy~~~~ki~~yA~TlP----~ll~~i~~--~l~~~v~-~~~~i~~~v~li~~~laik~i 249 (250)
T PF06691_consen 181 ILALIGLIIAKIMKRKLSYKQLWKISIYAITLP----TLLFAIIG--LLGISVP-FSFFINWIVSLIFLYLAIKEI 249 (250)
T ss_pred HHHHHHHHHHHhccCCccHHHHHHHHHHHHHHH----HHHHHHHH--HHhhcCc-HHHHHHHHHHHHHHHHHhccC
Confidence 333333333333345678888888887777665 32 22222 2222222 234566777888888888874
No 61
>PTZ00370 STEVOR; Provisional
Probab=28.61 E-value=1.3e+02 Score=23.73 Aligned_cols=32 Identities=19% Similarity=0.072 Sum_probs=20.5
Q ss_pred HHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 033132 25 AGKAAMSDGMSNLVFVFYSNAFASLVLLPASLL 57 (126)
Q Consensus 25 ~~k~~l~~g~~p~~l~~~R~~~A~l~L~~~~~~ 57 (126)
++-.|... +.|..++.+=.++-+++|..+..|
T Consensus 246 AAtaAsaa-F~Pygiaalvllil~vvliilYiw 277 (296)
T PTZ00370 246 AASAASSA-FYPYGIAALVLLILAVVLIILYIW 277 (296)
T ss_pred HHHHHHHh-hcccHHHHHHHHHHHHHHHHHHHH
Confidence 44455555 888888887777666665554433
No 62
>PF01790 LGT: Prolipoprotein diacylglyceryl transferase; InterPro: IPR001640 Prolipoprotein diacylglyceryl transferase [] is the bacterial enzyme catalysing the first step in lipoprotein biogenesis. It transfers the n-acyl diglyceride group onto what will become the N-terminal cysteine of membrane lipoproteins. This enzyme is an integral membrane protein.; GO: 0016757 transferase activity, transferring glycosyl groups, 0009249 protein lipoylation, 0042158 lipoprotein biosynthetic process, 0016020 membrane
Probab=27.43 E-value=2.7e+02 Score=20.95 Aligned_cols=21 Identities=24% Similarity=0.289 Sum_probs=11.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHH
Q 033132 34 MSNLVFVFYSNAFASLVLLPA 54 (126)
Q Consensus 34 ~~p~~l~~~R~~~A~l~L~~~ 54 (126)
+.|+.+..|....+..++...
T Consensus 8 iGpl~i~~ygl~~~lg~~~a~ 28 (256)
T PF01790_consen 8 IGPLAIPWYGLMMALGFLLAL 28 (256)
T ss_pred EcCchHHHHHHHHHHHHHHHH
Confidence 445666666666655444443
No 63
>COG2323 Predicted membrane protein [Function unknown]
Probab=26.78 E-value=2.8e+02 Score=20.94 Aligned_cols=79 Identities=13% Similarity=-0.033 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHhhcchhHHHHHHHHHHHhhcchHHHHHHHHHhHHHHH
Q 033132 37 LVFVFYSNAFASLVLLPASLLFHRSQIPPLTLPILSAFFLLGFLGYAKFYFFDLVAGFFLFDYNKFSCFYSFTCGIYCVT 116 (126)
Q Consensus 37 ~~l~~~R~~~A~l~L~~~~~~~~r~~~~~~~~~~~~~l~llg~~G~~~~~~~~~~~~~~gl~~tsa~~a~ii~~~~Pv~~ 116 (126)
+.-.++|.++..++++.+.....||+..+.+.-|....+.+| - ...+..+....+......+.++.+....++
T Consensus 4 ~~~~~ir~vi~~~~l~l~~ri~Gkr~isqmt~fd~vv~i~iG---~----i~~~~i~~~~i~~~~~~~~~~~~~~l~~~l 76 (224)
T COG2323 4 LLEVAIRSVIGYLILLLLLRIMGKRSISQMTIFDFVVMITLG---S----IAGDAIFDDDVSILPTIIAILTLALLQILL 76 (224)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCcCccccCCHHHHHHHHHHH---H----HHHHHhhCCCCchHHHHHHHHHHHHHHHHH
Confidence 445678999998888888777777776666665655444333 3 344555555555555555555555555555
Q ss_pred HHHHHh
Q 033132 117 VLVIIK 122 (126)
Q Consensus 117 ~l~~~~ 122 (126)
.-+-+|
T Consensus 77 ~~l~~k 82 (224)
T COG2323 77 SYLSLK 82 (224)
T ss_pred HHHHhc
Confidence 444444
No 64
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=26.47 E-value=1.1e+02 Score=24.72 Aligned_cols=96 Identities=10% Similarity=-0.019 Sum_probs=54.0
Q ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcC---CCCCCHHHHH-HHHHHHHhhcchhHHHHHHHHHH
Q 033132 20 VGLMFAGKAAMSDGMSNLVFVFYSNAFASLVLLPASLLFHRSQ---IPPLTLPILS-AFFLLGFLGYAKFYFFDLVAGFF 95 (126)
Q Consensus 20 g~~~v~~k~~l~~g~~p~~l~~~R~~~A~l~L~~~~~~~~r~~---~~~~~~~~~~-~l~llg~~G~~~~~~~~~~~~~~ 95 (126)
|.++...+.-.+-+. |+..+.+..++=.++=...-..++++. +.+.++++.. +..-.|+.+ .++-.+-.+
T Consensus 30 ~Ltf~~~~~~~~f~f-PLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtalat-----a~DIGLSN~ 103 (349)
T KOG1443|consen 30 GLTFYFKWLTKNFHF-PLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTALAT-----ALDIGLSNW 103 (349)
T ss_pred HHHHHhhhhhcCcCC-chHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhhhh-----hcccccccc
Confidence 445555554444333 444555554433332222111222221 2245666544 344555555 477777789
Q ss_pred HhhcchHHHHHHHHHhHHHHHHHHHH
Q 033132 96 LFDYNKFSCFYSFTCGIYCVTVLVII 121 (126)
Q Consensus 96 gl~~tsa~~a~ii~~~~Pv~~~l~~~ 121 (126)
+++|.+-+.-+..=+.+++|+.++.+
T Consensus 104 sl~yVtlSlYTM~KSSsi~FIllFs~ 129 (349)
T KOG1443|consen 104 SLEYVTLSLYTMTKSSSILFILLFSL 129 (349)
T ss_pred eeeeeeeeeeeeccccHHHHHHHHHH
Confidence 99999998888888888999888543
No 65
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=25.17 E-value=3.5e+02 Score=21.43 Aligned_cols=104 Identities=12% Similarity=-0.020 Sum_probs=66.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcC--CCCCCHHHHHHHHHHHHhhcchh
Q 033132 8 PVIGMMMAECAQVGLMFAGKAAMSDGMSNLVFVFYSNAFASLVLLPASLLFHRSQ--IPPLTLPILSAFFLLGFLGYAKF 85 (126)
Q Consensus 8 ~~l~ll~~~~~wg~~~v~~k~~l~~g~~p~~l~~~R~~~A~l~L~~~~~~~~r~~--~~~~~~~~~~~l~llg~~G~~~~ 85 (126)
|+..+.+ ++-||.....=|.. ++|+.+=.+.-...-...-+...++.+-.. .-.-+.+++..+...|....
T Consensus 150 pwval~l-a~sf~~Ygl~RK~~---~v~a~~g~~lE~l~l~p~al~yl~~l~~~~~~~~~~~~~~~~LLv~aG~vTa--- 222 (293)
T COG2962 150 PWVALAL-ALSFGLYGLLRKKL---KVDALTGLTLETLLLLPVALIYLLFLADSGQFLQQNANSLWLLLVLAGLVTA--- 222 (293)
T ss_pred cHHHHHH-HHHHHHHHHHHHhc---CCchHHhHHHHHHHHhHHHHHHHHHHhcCchhhhcCCchHHHHHHHhhHHHH---
Confidence 3344433 45677777777753 367765544444433333222222222211 01124567788888888884
Q ss_pred HHHHHHHHHHHhhcchHHHHHHHHHhHHHHHHHHH
Q 033132 86 YFFDLVAGFFLFDYNKFSCFYSFTCGIYCVTVLVI 120 (126)
Q Consensus 86 ~~~~~~~~~~gl~~tsa~~a~ii~~~~Pv~~~l~~ 120 (126)
+--.++..|-+..+=+.-++++...|.+..+++
T Consensus 223 --vpL~lf~~aa~~lpls~~G~lqYi~Ptl~flla 255 (293)
T COG2962 223 --VPLLLFAAAAKRLPLSTLGFLQYIEPTLMFLLA 255 (293)
T ss_pred --HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHH
Confidence 778889999999999999999999999988843
No 66
>PF05969 PSII_Ycf12: Photosystem II complex subunit Ycf12; InterPro: IPR010284 This family represents Ycf12, a core subunit of photosystem II; its function is unknown []. ; GO: 0015979 photosynthesis, 0009523 photosystem II, 0016021 integral to membrane; PDB: 3BZ2_y 3PRR_y 3PRQ_y 4FBY_m 3KZI_y 3BZ1_y 3A0B_y 3A0H_y 3ARC_Y.
Probab=24.88 E-value=1.2e+02 Score=15.98 Aligned_cols=19 Identities=11% Similarity=-0.017 Sum_probs=15.3
Q ss_pred HHHHHHhHHHHHHHHHHhh
Q 033132 105 FYSFTCGIYCVTVLVIIKD 123 (126)
Q Consensus 105 a~ii~~~~Pv~~~l~~~~~ 123 (126)
.+++...-|+++++++.|+
T Consensus 12 l~liv~aGP~VI~lLa~r~ 30 (33)
T PF05969_consen 12 LALIVLAGPLVIFLLAARK 30 (33)
T ss_dssp HHHHHHHHHHHHHHHHHCT
T ss_pred HHHHHHcccHHhhHHHhhc
Confidence 3467788899999998875
No 67
>PRK10578 hypothetical protein; Provisional
Probab=24.63 E-value=3e+02 Score=20.49 Aligned_cols=66 Identities=9% Similarity=-0.213 Sum_probs=31.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHH--HHHHHHHHHHhhcchhHHHHHHHHHHHhhcchHHH
Q 033132 34 MSNLVFVFYSNAFASLVLLPASLLFHRSQIPPLTLP--ILSAFFLLGFLGYAKFYFFDLVAGFFLFDYNKFSC 104 (126)
Q Consensus 34 ~~p~~l~~~R~~~A~l~L~~~~~~~~r~~~~~~~~~--~~~~l~llg~~G~~~~~~~~~~~~~~gl~~tsa~~ 104 (126)
.||+.+.--.+....+.-....++..|+.. +.++. .+.--+-+|.+.+ ...+..+..|.+...+..
T Consensus 54 ~P~~~~~~~~y~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~DAiGLa~F~v----~Ga~~al~~g~~~~~~i~ 121 (207)
T PRK10578 54 GPVFWVKDPTDLVVAMVTSMLTIVLVRQPR-RLPKWMLPVLDAVGLAVFVG----IGVNKAFNAEAGPLVAVC 121 (207)
T ss_pred CCceeecCccHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH----HHHHHHHHcCCCHHHHHH
Confidence 677666655666555554444433333211 11111 1234455666666 555655555544444333
No 68
>TIGR01478 STEVOR variant surface antigen, stevor family. This model represents the stevor branch of the rifin/stevor family (pfam02009) of predicted variant surface antigens as found in Plasmodium falciparum. This model is based on a set of stevor sequences kindly provided by Matt Berriman from the Sanger Center. This is a global model and assesses a penalty for incomplete sequence. Additional fragmentary sequences may be found with the fragment model and a cutoff of 8 bits.
Probab=24.14 E-value=1.5e+02 Score=23.43 Aligned_cols=31 Identities=16% Similarity=0.067 Sum_probs=18.9
Q ss_pred HHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 033132 26 GKAAMSDGMSNLVFVFYSNAFASLVLLPASLL 57 (126)
Q Consensus 26 ~k~~l~~g~~p~~l~~~R~~~A~l~L~~~~~~ 57 (126)
+-.|... +.|..++.+=.++-+++|..+..|
T Consensus 251 AtaA~aa-F~Pcgiaalvllil~vvliiLYiW 281 (295)
T TIGR01478 251 ASAATST-FLPYGIAALVLIILTVVLIILYIW 281 (295)
T ss_pred HHHHHHh-hcccHHHHHHHHHHHHHHHHHHHH
Confidence 3345554 788888777776666655554433
No 69
>PF06210 DUF1003: Protein of unknown function (DUF1003); InterPro: IPR010406 This entry consists of several hypothetical bacterial proteins of unknown function.
Probab=22.97 E-value=2.1e+02 Score=19.04 Aligned_cols=46 Identities=9% Similarity=0.091 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH--HHHHHHHHHHHhh
Q 033132 13 MMAECAQVGLMFAGKAAMSDGMSNLVFVFYSNAFA--SLVLLPASLLFHR 60 (126)
Q Consensus 13 l~~~~~wg~~~v~~k~~l~~g~~p~~l~~~R~~~A--~l~L~~~~~~~~r 60 (126)
.+....|-+..+..... ...||+.+.+.-++++ +++..|+......
T Consensus 11 ~~~~~~Wi~~N~~~~~~--~~fDpyPFilLnl~lS~~Aa~~ap~IlmsQN 58 (108)
T PF06210_consen 11 TVFLAVWILLNILAPPR--PAFDPYPFILLNLVLSLEAAYQAPLILMSQN 58 (108)
T ss_pred HHHHHHHHHHHhhcccc--CCCCCccHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 33445777766665433 2488877777777777 4566776665443
No 70
>PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins. Some of them may be involved in resistance to environmental stress [].
Probab=21.84 E-value=1.5e+02 Score=19.28 Aligned_cols=17 Identities=18% Similarity=0.386 Sum_probs=6.8
Q ss_pred HHHHHHHHHHHHHHHHH
Q 033132 9 VIGMMMAECAQVGLMFA 25 (126)
Q Consensus 9 ~l~ll~~~~~wg~~~v~ 25 (126)
.+.+++++++.-.+-+.
T Consensus 8 lL~l~LA~lLlisSeva 24 (95)
T PF07172_consen 8 LLGLLLAALLLISSEVA 24 (95)
T ss_pred HHHHHHHHHHHHHhhhh
Confidence 34444444443333333
No 71
>KOG3817 consensus Uncharacterized conserved protein [Function unknown]
Probab=20.69 E-value=4.9e+02 Score=21.54 Aligned_cols=86 Identities=9% Similarity=0.052 Sum_probs=49.7
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHH-HHHHHHHhhcCCCCCC-HHHHHHHHHHHHhhcchhHHHHHHHHHH
Q 033132 18 AQVGLMFAGKAAMSDGMSNLVFVFYSNAFASLVL-LPASLLFHRSQIPPLT-LPILSAFFLLGFLGYAKFYFFDLVAGFF 95 (126)
Q Consensus 18 ~wg~~~v~~k~~l~~g~~p~~l~~~R~~~A~l~L-~~~~~~~~r~~~~~~~-~~~~~~l~llg~~G~~~~~~~~~~~~~~ 95 (126)
.|..+.-+.|.+.++ ..-++..-....++-++. ..+++..--|.-|+-+ +..-.....+-++|. .+.|.
T Consensus 200 gWs~slY~i~ql~~n-Lq~Iwieyr~yvLgYvlivgliSfaVCYK~GPp~d~RS~~ilmWtLqli~l--------vl~Yf 270 (452)
T KOG3817|consen 200 GWSISLYVIKQLADN-LQLIWIEYRDYVLGYVLIVGLISFAVCYKIGPPKDPRSQTILMWTLQLIGL--------VLAYF 270 (452)
T ss_pred cchhHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCcchhhHHHHHHHHHHH--------HHHHH
Confidence 578888888888776 777777766777774433 3333333223333222 222122222333343 34457
Q ss_pred HhhcchHHHHHHHHHhH
Q 033132 96 LFDYNKFSCFYSFTCGI 112 (126)
Q Consensus 96 gl~~tsa~~a~ii~~~~ 112 (126)
|.+.++++.|.+|..+.
T Consensus 271 svq~p~~a~A~iI~~lc 287 (452)
T KOG3817|consen 271 SVQHPSAAIAAIIMVLC 287 (452)
T ss_pred hcccHHHHHHHHHHHHH
Confidence 89999999888777654
No 72
>PF12725 DUF3810: Protein of unknown function (DUF3810); InterPro: IPR024294 This family of bacterial proteins is functionally uncharacterised. Proteins in this family are typically between 333 and 377 amino acids in length and contain a conserved HEXXH sequence motif that is characteristic of metallopeptidases. This family may therefore belong to an as yet uncharacterised family of peptidase enzymes.
Probab=20.11 E-value=3.4e+02 Score=21.44 Aligned_cols=12 Identities=8% Similarity=0.119 Sum_probs=6.7
Q ss_pred HHHHHHhhcchH
Q 033132 91 VAGFFLFDYNKF 102 (126)
Q Consensus 91 ~~~~~gl~~tsa 102 (126)
+...+|++|--.
T Consensus 71 F~~~WGlNY~R~ 82 (318)
T PF12725_consen 71 FYLLWGLNYYRP 82 (318)
T ss_pred HHHHhhhhcCCc
Confidence 334577777543
Done!