BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>033135
MVSCRKIRRNSLLILLLLIASTLLFASPVLAKSRRPISDIEVRQKKMDCYADVESGLWGP
QCKSSMIAKENCALRCLSPTCYEFVYESDPLEEGEKDFVRSQEFKYCMHKLSLGESLEGI
RGSFDY

High Scoring Gene Products

Symbol, full name Information P value
AT5G17610 protein from Arabidopsis thaliana 1.1e-39

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  033135
        (126 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2151426 - symbol:AT5G17610 "AT5G17610" species...   423  1.1e-39   1


>TAIR|locus:2151426 [details] [associations]
            symbol:AT5G17610 "AT5G17610" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
            "extracellular region" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] [GO:0005783 "endoplasmic
            reticulum" evidence=IDA] GO:GO:0005783 EMBL:CP002688
            GenomeReviews:BA000015_GR EMBL:BT025595 EMBL:AK175531 EMBL:AK176664
            IPI:IPI00537114 RefSeq:NP_568353.1 UniGene:At.31526 PaxDb:Q67Y04
            PRIDE:Q67Y04 EnsemblPlants:AT5G17610.1 GeneID:831627
            KEGG:ath:AT5G17610 TAIR:At5g17610 eggNOG:NOG126173
            HOGENOM:HOG000140917 InParanoid:Q67Y04 OMA:DIESGLW PhylomeDB:Q67Y04
            ProtClustDB:CLSN2689749 Genevestigator:Q67Y04 Uniprot:Q67Y04
        Length = 121

 Score = 423 (154.0 bits), Expect = 1.1e-39, P = 1.1e-39
 Identities = 75/100 (75%), Positives = 86/100 (86%)

Query:    25 FASPVLAKSRRPISDIEVRQKKMDCYADVESGLWGPQCKSSMIAKENCALRCLSPTCYEF 84
             F   V +KS RPISD+E+RQKK +CY D+ESGLWG QCKSS IAKENCALRCLSP CY+ 
Sbjct:    22 FVPCVFSKSPRPISDVEIRQKKSECYGDIESGLWGWQCKSSAIAKENCALRCLSPVCYQL 81

Query:    85 VYESDPLEEGEKDFVRSQEFKYCMHKLSLGESLEGIRGSF 124
             +YESDPLEEGEKD +RSQE+KYCM+K SLGESLEG+RG F
Sbjct:    82 IYESDPLEEGEKDLIRSQEYKYCMYKSSLGESLEGVRGIF 121


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.135   0.418    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      126       112   0.00091  102 3  11 22  0.44    30
                                                     29  0.43    32


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  583 (62 KB)
  Total size of DFA:  130 KB (2081 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  11.53u 0.13s 11.66t   Elapsed:  00:00:00
  Total cpu time:  11.53u 0.13s 11.66t   Elapsed:  00:00:00
  Start:  Fri May 10 15:30:13 2013   End:  Fri May 10 15:30:13 2013

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