Query 033136
Match_columns 126
No_of_seqs 92 out of 94
Neff 2.1
Searched_HMMs 29240
Date Mon Mar 25 16:49:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033136.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/033136hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2wsc_E PSAE, PSI-E A, photosys 100.0 1.1E-57 3.7E-62 346.9 -1.1 118 4-126 1-124 (143)
2 1jb0_E Photosystem 1 reaction 100.0 1.1E-29 3.7E-34 177.1 4.0 44 82-126 1-44 (75)
3 1gxi_E Photosystem I reaction 100.0 6.8E-30 2.3E-34 177.4 0.5 43 82-126 2-44 (73)
4 1qp2_A Protein (PSAE protein); 99.9 7.1E-27 2.4E-31 161.0 4.1 44 81-126 1-44 (70)
5 3sd4_A PHD finger protein 20; 93.1 0.3 1E-05 31.2 6.0 44 75-124 6-49 (69)
6 2eqm_A PHD finger protein 20-l 86.8 2.1 7.2E-05 28.9 6.2 45 74-124 12-56 (88)
7 2m0o_A PHD finger protein 1; t 85.0 3.9 0.00013 28.5 6.8 43 76-124 21-63 (79)
8 2ckk_A KIN17; beta barrel, rib 77.3 2.2 7.6E-05 30.5 3.5 39 79-123 68-106 (127)
9 2equ_A PHD finger protein 20-l 74.9 6.2 0.00021 26.0 5.0 39 79-124 7-45 (74)
10 4a4f_A SurviVal of motor neuro 69.9 14 0.00049 22.8 5.6 43 76-124 3-46 (64)
11 1eik_A RNA polymerase subunit 67.8 2.2 7.7E-05 29.0 1.6 16 79-94 48-63 (77)
12 1hmj_A RPB5, protein (subunit 67.0 2.7 9.2E-05 28.7 1.8 15 79-93 46-60 (78)
13 1wxt_A Hypothetical protein FL 62.5 6.9 0.00024 23.4 2.9 22 79-100 23-44 (68)
14 3p8b_B Transcription antitermi 61.1 14 0.00048 25.8 4.7 34 77-112 87-120 (152)
15 1wxb_A Epidermal growth factor 60.9 7.5 0.00026 23.3 2.9 22 79-100 23-44 (68)
16 2jw4_A Cytoplasmic protein NCK 60.1 8 0.00027 23.5 2.9 23 78-100 22-44 (72)
17 2iim_A Proto-oncogene tyrosine 59.0 8.6 0.00029 22.4 2.9 22 79-100 22-43 (62)
18 2v1q_A SLA1, cytoskeleton asse 58.7 8.9 0.0003 22.0 2.8 22 78-99 17-40 (60)
19 2xk0_A Polycomb protein PCL; t 58.1 37 0.0013 22.9 6.2 39 78-124 12-50 (69)
20 1wjq_A KIAA1798 protein; MBT d 58.0 18 0.00061 25.5 4.8 42 77-124 9-50 (107)
21 2b86_A Cytoplasmic protein NCK 56.9 10 0.00035 23.3 3.0 22 79-100 20-41 (67)
22 3szh_A Avidin/streptavidin; hi 56.3 5.7 0.00019 29.1 2.1 17 92-108 8-24 (122)
23 4ay0_A Chaperone protein CAF1M 54.9 4.1 0.00014 31.0 1.2 20 80-99 70-98 (218)
24 1uhf_A Intersectin 2; beta bar 53.8 9.3 0.00032 23.0 2.5 22 78-99 23-44 (69)
25 4ayb_H DNA-directed RNA polyme 53.5 5.4 0.00019 27.1 1.5 15 79-93 54-68 (84)
26 2k2m_A EPS8-like protein 1; al 52.9 12 0.0004 22.5 2.8 22 79-100 24-45 (68)
27 1w1f_A Tyrosine-protein kinase 52.2 14 0.00048 21.5 3.0 22 78-99 22-43 (65)
28 2oi3_A Tyrosine-protein kinase 51.0 14 0.00049 22.7 3.1 22 78-99 40-61 (86)
29 2djq_A SH3 domain containing r 50.8 16 0.00056 21.6 3.2 22 78-99 22-44 (68)
30 2vkn_A Protein SSU81; membrane 50.6 10 0.00035 22.7 2.3 22 79-100 23-44 (70)
31 2d8j_A FYN-related kinase; SH3 50.6 12 0.0004 22.6 2.5 21 79-99 23-44 (77)
32 2do3_A Transcription elongatio 50.1 12 0.0004 25.0 2.6 30 80-111 16-45 (69)
33 2cud_A SRC-like-adapter; SH3 d 50.0 14 0.00047 22.9 2.9 22 78-99 32-53 (79)
34 1i07_A Epidermal growth factor 49.9 12 0.00041 21.6 2.5 21 79-99 17-37 (60)
35 1j3t_A Intersectin 2; beta bar 49.5 14 0.00049 22.4 2.8 21 79-99 26-46 (74)
36 2k9g_A SH3 domain-containing k 49.1 15 0.00051 22.0 2.8 22 79-100 25-49 (73)
37 2jte_A CD2-associated protein; 49.0 14 0.00048 21.6 2.6 21 79-99 22-45 (64)
38 1vq8_T 50S ribosomal protein L 48.7 15 0.00052 26.5 3.3 30 80-111 41-70 (120)
39 1ue9_A Intersectin 2; beta bar 48.5 16 0.00053 22.3 2.9 21 79-99 23-44 (80)
40 1k1z_A VAV; SH3, proto-oncogen 48.2 14 0.00048 22.5 2.7 23 78-100 33-57 (78)
41 1x2p_A Protein arginine N-meth 47.8 16 0.00056 21.6 2.9 21 79-99 23-44 (68)
42 3ew1_A Rhizavidin; high affini 47.8 7 0.00024 29.0 1.4 21 90-110 12-32 (135)
43 2jt4_A Cytoskeleton assembly c 47.7 16 0.00054 21.6 2.8 21 79-99 22-44 (71)
44 2vwf_A Growth factor receptor- 47.0 18 0.00061 20.6 2.8 21 79-99 18-39 (58)
45 2x3w_D Syndapin I, protein kin 46.6 15 0.00052 21.0 2.5 22 78-99 18-41 (60)
46 1zuy_A Myosin-5 isoform; SH3 d 46.2 20 0.00068 20.3 3.0 21 78-98 16-37 (58)
47 2cre_A HEF-like protein; SH3 d 45.8 16 0.00055 21.6 2.6 21 79-99 23-47 (71)
48 1y0m_A 1-phosphatidylinositol- 45.8 19 0.00064 20.9 2.8 21 79-99 19-40 (61)
49 1gcq_C VAV proto-oncogene; SH3 45.6 15 0.00051 21.8 2.4 22 79-100 26-49 (70)
50 2dl3_A Sorbin and SH3 domain-c 45.5 19 0.00064 21.2 2.8 21 79-99 23-44 (68)
51 2e6z_A Transcription elongatio 45.4 15 0.00052 22.7 2.5 30 79-110 5-34 (59)
52 1k4u_S Phagocyte NADPH oxidase 45.4 17 0.00058 21.1 2.6 21 79-99 21-42 (62)
53 1zx6_A YPR154WP; SH3 domain, p 44.8 20 0.00068 20.5 2.8 21 79-99 18-39 (58)
54 2dil_A Proline-serine-threonin 44.6 22 0.00076 21.0 3.1 21 79-99 24-45 (69)
55 1ruw_A Myosin-3 isoform, MYO3; 44.5 21 0.00071 21.2 3.0 21 78-98 18-39 (69)
56 2da9_A SH3-domain kinase bindi 44.2 17 0.00059 21.6 2.6 21 79-99 23-46 (70)
57 1zuu_A BZZ1 protein; SH3 domai 44.1 19 0.00065 20.5 2.6 22 78-99 16-39 (58)
58 2xmf_A Myosin 1E SH3; motor pr 44.0 21 0.00073 20.5 2.9 22 78-99 20-42 (60)
59 2jmc_A Spectrin alpha chain, b 44.0 17 0.00057 22.4 2.5 22 78-99 6-28 (77)
60 1u5s_A Cytoplasmic protein NCK 44.0 18 0.00062 21.5 2.6 21 79-99 22-45 (71)
61 2enm_A Sorting nexin-9; SH3-li 43.8 19 0.00064 21.8 2.7 22 79-100 26-49 (77)
62 2yun_A Nostrin; nitric oxide s 43.7 20 0.00068 21.9 2.8 21 79-99 23-44 (79)
63 2cuc_A SH3 domain containing r 43.6 20 0.00067 21.2 2.7 22 78-99 22-44 (70)
64 2oaw_A Spectrin alpha chain, b 43.4 21 0.00072 20.6 2.8 21 78-98 16-37 (65)
65 2j6f_A CD2-associated protein; 43.2 21 0.00073 20.8 2.8 21 79-99 17-39 (62)
66 3dlm_A Histone-lysine N-methyl 43.2 40 0.0014 26.6 5.2 41 75-124 152-192 (213)
67 1x6b_A RHO guanine exchange fa 42.9 16 0.00056 22.4 2.4 22 78-99 32-53 (79)
68 2kxd_A 11-MER peptide, SH3 dom 42.9 20 0.00067 21.7 2.7 23 77-99 13-36 (73)
69 2ydl_A SH3 domain-containing k 42.9 21 0.00073 21.7 2.9 21 79-99 18-41 (69)
70 2ct3_A Vinexin; SH3 domian, st 42.7 17 0.00057 21.5 2.3 20 79-98 23-43 (70)
71 2ysq_A RHO guanine nucleotide 42.3 23 0.0008 21.7 3.0 21 79-99 26-47 (81)
72 2dnu_A RUH-061, SH3 multiple d 41.9 19 0.00064 21.4 2.5 21 78-98 23-44 (71)
73 2o9s_A Ponsin; SH3 domain, sig 41.9 24 0.00081 20.8 2.9 21 78-98 21-42 (67)
74 1oot_A Hypothetical 40.4 kDa p 41.8 25 0.00087 20.1 3.0 22 78-99 18-42 (60)
75 2ecz_A Sorbin and SH3 domain-c 41.6 18 0.0006 21.5 2.3 20 79-98 23-43 (70)
76 3j21_U 50S ribosomal protein L 41.4 22 0.00076 25.6 3.2 30 80-111 44-73 (121)
77 2ega_A SH3 and PX domain-conta 41.3 23 0.00079 21.0 2.8 22 78-99 23-45 (70)
78 1wx6_A Cytoplasmic protein NCK 41.2 21 0.00072 22.3 2.7 21 79-99 33-56 (91)
79 2ct4_A CDC42-interacting prote 40.9 28 0.00096 20.6 3.2 17 78-94 22-38 (70)
80 2dl4_A Protein STAC; SH3 domai 40.8 26 0.0009 20.8 3.0 21 79-99 23-44 (68)
81 4dne_A Streptavidin; biotin, b 40.6 10 0.00035 29.2 1.4 18 94-111 42-59 (183)
82 2bc3_A Streptavidin; T7 TAG, b 40.6 12 0.0004 28.3 1.7 17 94-110 18-34 (159)
83 4hcz_A PHD finger protein 1; p 40.5 20 0.00069 23.5 2.6 38 81-124 3-40 (58)
84 2dl5_A KIAA0769 protein; SH3 d 40.4 21 0.00072 21.9 2.6 21 79-99 29-51 (78)
85 2jxb_A T-cell surface glycopro 40.3 16 0.00053 23.0 2.0 22 79-100 47-68 (86)
86 2zkr_t 60S ribosomal protein L 40.2 24 0.00083 26.2 3.3 30 80-111 47-77 (145)
87 2bz8_A SH3-domain kinase bindi 40.2 27 0.00092 20.0 2.9 22 78-99 16-38 (58)
88 2gnc_A SLIT-ROBO RHO GTPase-ac 40.1 22 0.00076 20.5 2.5 20 79-98 22-42 (60)
89 3bbo_W Ribosomal protein L24; 39.6 8 0.00028 30.2 0.6 27 82-110 69-95 (191)
90 3h0g_E DNA-directed RNA polyme 39.0 13 0.00045 29.0 1.8 15 80-94 183-197 (210)
91 1uti_A GRB2-related adaptor pr 38.9 31 0.001 19.6 3.0 21 78-98 16-37 (58)
92 1spk_A RSGI RUH-010, riken cDN 38.3 18 0.00061 21.6 2.0 21 79-99 24-46 (72)
93 1dzf_A DNA-directed RNA polyme 38.3 14 0.00047 29.1 1.8 16 79-94 187-202 (215)
94 1wyx_A CRK-associated substrat 38.0 26 0.00089 20.7 2.7 21 79-99 19-43 (69)
95 3reb_B Tyrosine-protein kinase 38.0 26 0.00089 21.8 2.8 22 79-100 19-40 (90)
96 2ak5_A RHO guanine nucleotide 37.9 29 0.00099 20.1 2.8 22 78-99 21-43 (64)
97 3rdo_A Streptavidin; improved 37.9 10 0.00035 28.6 1.0 28 83-110 16-47 (153)
98 2drm_A Acanthamoeba myosin IB; 37.9 30 0.001 19.6 2.8 21 79-99 19-40 (58)
99 1x43_A Endophilin B1, SH3 doma 37.8 25 0.00085 21.6 2.6 21 79-99 33-56 (81)
100 3thk_A Spectrin alpha chain, b 37.6 29 0.00099 20.6 2.8 21 79-99 21-42 (73)
101 2dbm_A SH3-containing GRB2-lik 37.5 24 0.00083 21.2 2.5 21 79-99 23-44 (73)
102 1cka_A C-CRK N-terminal SH3 do 37.4 33 0.0011 19.4 2.9 21 79-99 17-38 (57)
103 2cub_A Cytoplasmic protein NCK 36.5 26 0.00091 22.0 2.7 21 79-99 33-54 (88)
104 2g6f_X RHO guanine nucleotide 36.1 34 0.0012 19.6 2.9 22 78-99 19-41 (59)
105 1tuc_A Alpha-spectrin; capping 36.0 31 0.001 20.3 2.8 21 79-99 5-26 (63)
106 2zjr_R 50S ribosomal protein L 35.8 47 0.0016 23.5 4.1 30 80-111 14-43 (115)
107 1uj0_A Signal transducing adap 35.7 33 0.0011 19.9 2.8 21 79-99 21-42 (62)
108 2dl7_A KIAA0769 protein; SH3 d 35.6 32 0.0011 20.6 2.8 21 79-99 24-48 (73)
109 2rf0_A Mitogen-activated prote 35.4 30 0.001 22.3 2.8 15 79-93 45-59 (89)
110 2nwm_A Vinexin; cell adhesion; 35.4 32 0.0011 20.6 2.8 21 79-99 17-38 (65)
111 1zlm_A Osteoclast stimulating 35.3 37 0.0013 19.4 2.9 22 78-99 18-40 (58)
112 3c0c_A Endophilin-A2; endocyto 35.2 32 0.0011 20.7 2.8 21 79-99 29-50 (73)
113 1g2b_A Spectrin alpha chain; c 35.1 33 0.0011 19.9 2.8 20 79-98 37-57 (62)
114 1ujy_A RHO guanine nucleotide 35.1 23 0.0008 21.4 2.2 21 79-99 26-47 (76)
115 3u5e_Y L33, YL33, 60S ribosoma 35.1 31 0.001 25.2 3.1 28 81-110 49-76 (127)
116 2a28_A BZZ1 protein; SH3 domai 35.0 39 0.0013 19.0 3.0 21 78-98 15-37 (54)
117 1s1n_A Nephrocystin 1; beta ba 34.8 25 0.00084 20.7 2.2 22 78-99 25-47 (68)
118 1w70_A Neutrophil cytosol fact 34.7 37 0.0013 19.6 2.9 21 79-99 20-41 (60)
119 3v2d_Y 50S ribosomal protein L 34.7 33 0.0011 24.3 3.1 30 80-111 5-34 (110)
120 2kt8_A Probable surface protei 34.3 17 0.00057 23.0 1.4 18 82-99 29-46 (76)
121 1csk_A C-SRC SH3 domain; phosp 34.3 33 0.0011 20.4 2.7 22 78-99 26-49 (71)
122 2ew3_A SH3-containing GRB2-lik 34.2 34 0.0012 20.6 2.8 21 79-99 19-40 (68)
123 1x69_A Cortactin isoform A; SH 34.1 34 0.0011 20.9 2.8 22 78-99 32-54 (79)
124 1uhc_A KIAA1010 protein; beta 34.0 32 0.0011 21.0 2.7 16 79-94 29-44 (79)
125 3ulr_B SRC substrate cortactin 33.8 40 0.0014 19.4 3.0 21 79-99 25-46 (65)
126 1i1j_A Melanoma derived growth 33.8 26 0.00088 23.7 2.4 15 79-93 38-52 (108)
127 4f14_A Nebulette; SH3 domain, 33.7 41 0.0014 19.1 3.0 21 79-99 22-43 (64)
128 1hsq_A Phospholipase C-gamma ( 33.7 19 0.00065 21.5 1.6 22 78-99 21-43 (71)
129 2kxc_A Brain-specific angiogen 33.5 22 0.00076 20.9 1.8 20 79-98 23-44 (67)
130 4esr_A Jouberin; AHI-1, AHI1, 32.9 38 0.0013 19.9 2.8 21 79-99 22-43 (69)
131 1uff_A Intersectin 2; beta bar 32.8 33 0.0011 21.7 2.7 21 79-99 21-44 (93)
132 3fdr_A Tudor and KH domain-con 32.8 95 0.0032 19.7 6.1 39 78-123 24-63 (94)
133 1xov_A PLY protein, plypsa; al 32.7 26 0.0009 28.2 2.6 17 83-99 221-237 (326)
134 3iz5_Y 60S ribosomal protein L 32.5 37 0.0013 25.5 3.3 30 80-111 47-76 (150)
135 2ekh_A SH3 and PX domain-conta 32.4 43 0.0015 20.6 3.1 20 79-98 24-44 (80)
136 2fei_A CD2-associated protein; 32.3 31 0.0011 20.7 2.4 22 79-100 17-39 (65)
137 1jo8_A ABP1P, actin binding pr 31.8 43 0.0015 19.0 2.8 21 78-98 15-37 (58)
138 1x2q_A Signal transducing adap 31.7 41 0.0014 21.0 2.9 21 79-99 33-54 (88)
139 1wi7_A SH3-domain kinase bindi 31.4 25 0.00086 20.7 1.8 21 79-99 23-44 (68)
140 1b07_A Protein (proto-oncogene 31.4 47 0.0016 19.7 3.1 20 79-98 19-39 (65)
141 3fo8_D Tail sheath protein GP1 31.4 41 0.0014 27.9 3.6 33 79-112 25-57 (283)
142 2dl8_A SLIT-ROBO RHO GTPase-ac 31.2 38 0.0013 20.3 2.6 20 79-98 25-45 (72)
143 2csi_A RIM-BP2, RIM binding pr 31.1 37 0.0013 20.6 2.6 23 77-99 28-52 (76)
144 1gl5_A Tyrosine-protein kinase 31.1 44 0.0015 19.6 2.9 22 78-99 17-39 (67)
145 4e6r_A Cytoplasmic protein NCK 30.8 49 0.0017 18.5 3.0 22 79-100 17-39 (58)
146 1g5v_A SurviVal motor neuron p 30.7 1.1E+02 0.0036 20.5 5.0 40 78-123 7-47 (88)
147 2m0y_A Dedicator of cytokinesi 30.5 23 0.0008 21.0 1.6 21 79-99 27-47 (74)
148 1aww_A ATK, AMGX1, BPK, bruton 30.5 34 0.0012 20.1 2.3 22 78-99 23-45 (67)
149 2krs_A Probable enterotoxin; a 30.5 17 0.00057 22.7 0.9 18 82-99 27-44 (74)
150 1x2k_A OSTF1, osteoclast stimu 30.4 49 0.0017 19.5 3.0 21 79-99 23-44 (68)
151 3ngp_A Spectrin alpha chain, b 30.0 48 0.0016 18.8 2.8 21 79-99 22-43 (62)
152 3u23_A CD2-associated protein; 29.6 42 0.0014 19.2 2.5 21 79-99 23-44 (65)
153 2yup_A Vinexin; sorbin and SH3 29.6 38 0.0013 21.2 2.5 21 78-98 32-53 (90)
154 1nm7_A Peroxisomal membrane pr 29.4 51 0.0018 20.4 3.1 16 79-94 24-39 (69)
155 4a17_S RPL26, 60S ribosomal pr 29.4 46 0.0016 24.6 3.3 29 81-111 48-76 (135)
156 2ebp_A SAM and SH3 domain-cont 29.3 43 0.0015 20.4 2.7 22 78-99 26-48 (73)
157 2dm1_A Protein VAV-2; RHO fami 29.3 35 0.0012 20.5 2.3 16 79-94 23-38 (73)
158 4d8k_A Tyrosine-protein kinase 29.2 43 0.0015 23.2 2.9 23 78-100 27-49 (175)
159 2epd_A RHO GTPase-activating p 29.1 27 0.00094 21.2 1.7 20 79-98 26-46 (76)
160 2r58_A Polycomb protein SCM; M 29.1 1.3E+02 0.0044 23.7 6.0 56 62-123 124-179 (265)
161 3r8s_U 50S ribosomal protein L 29.0 45 0.0015 23.2 3.0 27 82-110 4-30 (102)
162 2ege_A Uncharacterized protein 29.0 38 0.0013 20.6 2.4 22 78-99 29-52 (75)
163 2jgs_A Circular permutant of a 28.3 16 0.00054 27.2 0.6 19 95-113 100-121 (130)
164 3e4w_A Putative uncharacterize 28.1 31 0.001 27.9 2.3 11 115-125 64-74 (320)
165 2jvv_A Transcription antitermi 28.0 1.1E+02 0.0038 21.6 5.0 32 78-111 124-155 (181)
166 2eqj_A Metal-response element- 27.7 1.4E+02 0.0046 19.9 5.8 45 74-124 6-50 (66)
167 2eqi_A Phospholipase C, gamma 27.1 39 0.0013 19.9 2.1 20 79-98 23-43 (69)
168 1d1n_A Initiation factor 2; be 27.0 28 0.00095 24.4 1.6 17 82-98 33-49 (99)
169 3h6z_A Polycomb protein SFMBT; 26.7 47 0.0016 28.1 3.3 37 79-124 34-84 (447)
170 2v1r_A Peroxisomal membrane pr 26.2 56 0.0019 19.7 2.8 16 79-94 31-46 (80)
171 2eyx_A V-CRK sarcoma virus CT1 26.0 37 0.0013 20.1 1.9 21 79-99 24-45 (67)
172 1sem_A SEM-5; SRC-homology 3 ( 26.0 61 0.0021 18.2 2.8 21 78-98 17-38 (58)
173 3rnj_A Brain-specific angiogen 25.8 55 0.0019 19.1 2.6 20 80-99 25-46 (67)
174 2j05_A RAS GTPase-activating p 25.7 63 0.0022 18.8 2.9 21 79-99 22-43 (65)
175 2kq8_A Cell WALL hydrolase; GF 25.7 17 0.00059 22.3 0.3 19 81-99 27-45 (70)
176 2pqh_A Spectrin alpha chain, b 25.7 59 0.002 19.9 2.8 20 79-98 18-38 (80)
177 2l0a_A STAM-1, signal transduc 25.5 51 0.0017 20.4 2.5 21 79-99 33-54 (72)
178 2rqr_A CED-12 homolog, engulfm 25.5 48 0.0016 22.4 2.6 22 78-99 74-95 (119)
179 2eko_A Histone acetyltransfera 25.5 1.1E+02 0.0037 20.6 4.4 42 81-126 9-54 (87)
180 1jqq_A PEX13P, peroxisomal mem 25.4 45 0.0015 20.8 2.3 17 79-95 31-47 (92)
181 3cqt_A P59-FYN, proto-oncogene 25.2 60 0.002 20.1 2.8 20 79-98 21-41 (79)
182 1tg0_A BBC1 protein, myosin ta 25.2 68 0.0023 18.8 3.0 22 78-99 22-44 (68)
183 2jqo_A Hypothetical protein YO 25.1 22 0.00076 25.8 0.9 12 79-90 68-79 (108)
184 2jng_A Cullin-7, CUL-7; P53 bi 25.0 91 0.0031 22.4 4.1 38 82-123 22-60 (105)
185 2d8h_A SH3YL1 protein; SH3 dom 24.9 41 0.0014 20.5 2.0 16 79-94 33-48 (80)
186 1ugv_A KIAA0621, olygophrenin- 24.4 40 0.0014 20.2 1.9 21 79-99 26-48 (72)
187 1neg_A Spectrin alpha chain, b 24.4 60 0.0021 20.6 2.8 21 79-99 33-54 (83)
188 2ed0_A ABL interactor 2; coile 24.3 66 0.0022 19.5 2.9 21 79-99 33-54 (78)
189 1ng2_A Neutrophil cytosolic fa 24.2 58 0.002 23.1 3.0 23 77-99 25-48 (193)
190 2fpe_A C-JUN-amino-terminal ki 23.9 73 0.0025 18.3 2.9 21 79-99 19-40 (62)
191 2csq_A RIM-BP2, RIM binding pr 23.6 50 0.0017 21.1 2.3 21 79-99 41-64 (97)
192 2dbk_A CRK-like protein; struc 23.5 48 0.0016 20.7 2.2 20 79-98 34-54 (88)
193 3eg3_A Proto-oncogene tyrosine 23.4 77 0.0026 17.9 2.9 21 79-99 21-43 (63)
194 3h0h_A Proto-oncogene tyrosine 23.4 75 0.0026 18.7 2.9 21 79-99 31-52 (73)
195 1u5u_A Allene oxide synthase-l 23.2 46 0.0016 27.5 2.5 11 115-125 96-106 (374)
196 2e5k_A Suppressor of T-cell re 23.1 62 0.0021 20.3 2.6 15 79-93 32-46 (94)
197 2lcc_A AT-rich interactive dom 22.7 1.5E+02 0.0053 19.1 4.6 41 81-125 5-48 (76)
198 2egc_A SH3 and PX domain-conta 22.6 56 0.0019 19.8 2.3 17 79-95 25-41 (75)
199 2c4i_A Avidin; biotin, glycopr 22.5 44 0.0015 27.5 2.3 16 93-108 82-97 (271)
200 2biv_A SCML2 protein, sex COMB 22.4 1.5E+02 0.005 23.0 5.2 43 76-124 166-208 (243)
201 2yt6_A Adult MALE urinary blad 22.4 77 0.0026 20.1 3.0 21 78-98 42-63 (109)
202 2dmo_A Neutrophil cytosol fact 22.3 81 0.0028 18.6 2.9 20 79-98 23-43 (68)
203 3bbo_R Ribosomal protein L19; 22.2 15 0.00051 29.7 -0.6 11 44-54 72-82 (233)
204 3mea_A SAGA-associated factor 22.1 1.9E+02 0.0066 21.9 5.6 38 77-118 40-81 (180)
205 1yn8_A NBP2, NAP1-binding prot 22.1 75 0.0026 17.8 2.7 18 78-95 16-33 (59)
206 2i0n_A Class VII unconventiona 22.0 66 0.0023 19.7 2.6 16 79-94 26-41 (80)
207 2o2o_A SH3-domain kinase-bindi 21.9 67 0.0023 20.7 2.7 22 79-100 34-56 (92)
208 2diq_A Tudor and KH domain-con 21.7 1E+02 0.0035 20.1 3.6 39 78-123 29-68 (110)
209 4ag1_C Fynomer; hydrolase-de n 21.4 65 0.0022 20.1 2.5 21 79-99 22-43 (84)
210 1dj7_B Ferredoxin thioredoxin 20.9 79 0.0027 21.5 2.9 41 83-123 2-58 (75)
211 3pnw_C Tudor domain-containing 20.6 1.8E+02 0.006 18.6 5.1 37 81-123 17-54 (77)
212 1nz9_A Transcription antitermi 20.6 1.4E+02 0.0049 17.5 5.1 30 80-111 3-32 (58)
213 1wxu_A Peroxisomal biogenesis 20.5 55 0.0019 20.6 2.0 17 79-95 33-49 (93)
214 1x6g_A Megakaryocyte-associate 20.2 1E+02 0.0035 18.9 3.2 21 79-99 33-55 (81)
215 1gbq_A GRB2; complex (signal t 20.0 70 0.0024 19.2 2.3 16 79-94 25-40 (74)
No 1
>2wsc_E PSAE, PSI-E A, photosystem I reaction center subunit IV A, chloroplastic; photosynthesis, electron transfer, membrane proteins, large complexes; HET: CL1 PQN BCR LMU LMG SUC UNL; 3.30A {Arabidopsis thaliana} PDB: 2wse_E* 2wsf_E* 2o01_E* 3lw5_E*
Probab=100.00 E-value=1.1e-57 Score=346.94 Aligned_cols=118 Identities=49% Similarity=0.786 Sum_probs=44.0
Q ss_pred cccccccccceeccccccccCC-CCcceEEEecCCCCCCCceeEEEEeccccCCCC-C----ccccCCCCCCCCCCCCCC
Q 033136 4 CNMASAASGFSLTPNVATNVNS-GSKSNMLFFPPKNNSSNSFRLVVRASEEAAAPP-A----AATTAAPAEGEAAPKPKP 77 (126)
Q Consensus 4 ~~MaSAasgF~l~~nv~~~~~~-~s~~~~~f~~~k~~~~~~~rlvvRA~e~~aa~~-~----~a~~aap~~~~~a~k~kp 77 (126)
||||||+|||+|++|+++++++ +++++|+|||+++++ +||||||+|++++++ + +++++++++++ ++|+||
T Consensus 1 ~~masaas~f~l~~~v~~~~~~~~~~~~~~f~~~~~~~---~rlvvra~e~~a~~~p~~~~~~~~~~~~~~~~-~~~~kp 76 (143)
T 2wsc_E 1 MAMTTASTVFVLPANVTSVAGASSSRSSVSFLPMRNAG---SRLVVRAAEDPAPASSSSKDSPAAAAAPDGAT-ATKPKP 76 (143)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CcccccccceeecccccccccCCCCcceEEEecccCCC---ceEEEEcccCCCCCCccccccccccccccccc-cccCCC
Confidence 7999999999999999997655 789999999999988 999999999988763 2 33566666666 679999
Q ss_pred CCCCCCCCCeeEEeeccceeccccceEEEEccCCceeeeeEEEEeeecC
Q 033136 78 PPIGPKRGAKVKILRRESYWYNGIGSVVAVDQVRLFSIFLVYVTFNHFK 126 (126)
Q Consensus 78 ppigp~RGskVrIlR~ESYWyn~vGtVvsVDq~~~~~rYPVvVRF~kv~ 126 (126)
|||||+||+||||||||||||||||+|++|||+.+ |||||+|||||||
T Consensus 77 p~igp~RGskVrIlR~ESYWyn~vGtVvsVDqs~g-irYPVvVRF~KVN 124 (143)
T 2wsc_E 77 PPIGPKRGSKVKILRRESYWFKNVGSVVAVDQDPK-TRYPVVVRFAKVN 124 (143)
T ss_dssp --CCSCSSSCBCCCSSSSTTTTSCBBCCCCCCSSC-CSCCCBCBCSCCC
T ss_pred CCCCCCCCCEeEEccccceeecCcceEEEEecCCC-ccccEEEEeeeec
Confidence 99999999999999999999999999999999844 6999999999997
No 2
>1jb0_E Photosystem 1 reaction centre subunit IV; membrane protein, multiprotein-pigment complex, photosynthes; HET: CL1 PQN BCR LHG LMG; 2.50A {Synechococcus elongatus} SCOP: b.34.4.2 PDB: 3pcq_E*
Probab=99.95 E-value=1.1e-29 Score=177.07 Aligned_cols=44 Identities=50% Similarity=0.832 Sum_probs=41.2
Q ss_pred CCCCCeeEEeeccceeccccceEEEEccCCceeeeeEEEEeeecC
Q 033136 82 PKRGAKVKILRRESYWYNGIGSVVAVDQVRLFSIFLVYVTFNHFK 126 (126)
Q Consensus 82 p~RGskVrIlR~ESYWyn~vGtVvsVDq~~~~~rYPVvVRF~kv~ 126 (126)
++|||||||||||||||||+|||++|||+.+ |||||+|||||||
T Consensus 1 i~RGskVrIlR~ESYWyn~vGtVasVD~s~g-i~YPV~VRFdkVN 44 (75)
T 1jb0_E 1 VQRGSKVKILRPESYWYNEVGTVASVDQTPG-VKYPVIVRFDKVN 44 (75)
T ss_dssp CCTTCEEEECCTTCTTBTCEEEEEEECCCTT-CSCCEEEECSSCC
T ss_pred CCCCCEEEEccccceeecCcceEEEEecCCC-ccccEEEEEeeec
Confidence 5899999999999999999999999999833 6999999999997
No 3
>1gxi_E Photosystem I reaction center subunit IV; photosynthesis, PSAE SUB-UNIT, thylakoid; NMR {Synechocystis SP} SCOP: b.34.4.2 PDB: 1pse_A 1psf_A
Probab=99.95 E-value=6.8e-30 Score=177.40 Aligned_cols=43 Identities=40% Similarity=0.799 Sum_probs=41.4
Q ss_pred CCCCCeeEEeeccceeccccceEEEEccCCceeeeeEEEEeeecC
Q 033136 82 PKRGAKVKILRRESYWYNGIGSVVAVDQVRLFSIFLVYVTFNHFK 126 (126)
Q Consensus 82 p~RGskVrIlR~ESYWyn~vGtVvsVDq~~~~~rYPVvVRF~kv~ 126 (126)
++|||||||||||||||||+|||++|||+| |||||+|||||||
T Consensus 2 i~RGskVrIlR~ESYWyn~vGtVasVD~sg--i~YPVvVRF~kVN 44 (73)
T 1gxi_E 2 LNRGDKVRIKRTESYWYGDVGTVASVEKSG--ILYPVIVRFDRVN 44 (73)
T ss_dssp CCTTCCEEECCSSSTTTTEEECBCCTTTCC--SSSCEEECCSCSC
T ss_pred ccCCCEEEEccccceeecCcceEEEEcCCC--CEeeEEEEEEeec
Confidence 689999999999999999999999999997 5999999999997
No 4
>1qp2_A Protein (PSAE protein); mainly beta, roll, pleckstrin topology, SH3-like, electron T; NMR {Nostoc SP} SCOP: b.34.4.2 PDB: 1qp3_A
Probab=99.93 E-value=7.1e-27 Score=160.97 Aligned_cols=44 Identities=43% Similarity=0.774 Sum_probs=42.1
Q ss_pred CCCCCCeeEEeeccceeccccceEEEEccCCceeeeeEEEEeeecC
Q 033136 81 GPKRGAKVKILRRESYWYNGIGSVVAVDQVRLFSIFLVYVTFNHFK 126 (126)
Q Consensus 81 gp~RGskVrIlR~ESYWyn~vGtVvsVDq~~~~~rYPVvVRF~kv~ 126 (126)
|++|||+|||||+||||||++|+|++|||++ ++|||+|||||||
T Consensus 1 Mi~rGs~VrIlr~eSywy~~vG~V~~Vd~~~--~~ypV~VrFekvN 44 (70)
T 1qp2_A 1 MVQRGSKVRILRPESYWFQDVGTVASVDQSG--IKYPVIVRFEKVN 44 (70)
T ss_dssp CCCTTCEEEECCTTSTTTTCEEEEEEECCSS--CSCSEEEECSSCC
T ss_pred CcCCCCEEEEcCccceeecceeEEEEEeCCC--cEeeEEEEecccc
Confidence 5899999999999999999999999999997 6999999999987
No 5
>3sd4_A PHD finger protein 20; tudor domain, transcription; 1.93A {Homo sapiens} PDB: 3q1j_A
Probab=93.14 E-value=0.3 Score=31.17 Aligned_cols=44 Identities=23% Similarity=0.372 Sum_probs=34.5
Q ss_pred CCCCCCCCCCCCeeEEeeccceeccccceEEEEccCCceeeeeEEEEeee
Q 033136 75 PKPPPIGPKRGAKVKILRRESYWYNGIGSVVAVDQVRLFSIFLVYVTFNH 124 (126)
Q Consensus 75 ~kpppigp~RGskVrIlR~ESYWyn~vGtVvsVDq~~~~~rYPVvVRF~k 124 (126)
+.+++.+.+.|.|+..+-+..=|| +.||+.||..+. + +.|+|+.
T Consensus 6 ~~~~~~~F~vGmkLEa~d~~~p~~--~AtV~~v~~~~~--~--~~VhfdG 49 (69)
T 3sd4_A 6 PNRRGISFEVGAQLEARDRLKNWY--PAHIEDIDYEEG--K--VLIHFKR 49 (69)
T ss_dssp CCCTTCCCSTTCEEEEECTTSCEE--EEEEEEEETTTT--E--EEEEETT
T ss_pred CCCCCCCcCCCCEEEEEECCCCcc--ccEEEEEeccCC--E--EEEEeCC
Confidence 345688999999999987766674 899999986664 4 3889975
No 6
>2eqm_A PHD finger protein 20-like 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2jtf_A
Probab=86.83 E-value=2.1 Score=28.91 Aligned_cols=45 Identities=24% Similarity=0.398 Sum_probs=34.0
Q ss_pred CCCCCCCCCCCCCeeEEeeccceeccccceEEEEccCCceeeeeEEEEeee
Q 033136 74 KPKPPPIGPKRGAKVKILRRESYWYNGIGSVVAVDQVRLFSIFLVYVTFNH 124 (126)
Q Consensus 74 k~kpppigp~RGskVrIlR~ESYWyn~vGtVvsVDq~~~~~rYPVvVRF~k 124 (126)
.+..++.+.+.|.||..+-...-|| +..|..||..+. + +.|+|+.
T Consensus 12 ~~~~~~~~F~vGmkLEA~D~~~~~~--~a~i~~v~~~~~--~--v~VHfdG 56 (88)
T 2eqm_A 12 PPNRPGITFEIGARLEALDYLQKWY--PSRIEKIDYEEG--K--MLVHFER 56 (88)
T ss_dssp CCSCSSCCCCSSCEEEEECTTSCEE--EEEEEEEETTTT--E--EEEEESS
T ss_pred CCCCCcCcCCCCCEEEEEcCCCCee--EEEEEEEeccCC--E--EEEEECC
Confidence 3445678999999999998888897 566666776654 4 5899975
No 7
>2m0o_A PHD finger protein 1; tudor domain, H3K36ME3 binding, peptide binding protein; HET: M3L; NMR {Homo sapiens}
Probab=84.97 E-value=3.9 Score=28.51 Aligned_cols=43 Identities=23% Similarity=0.358 Sum_probs=32.1
Q ss_pred CCCCCCCCCCCeeEEeeccceeccccceEEEEccCCceeeeeEEEEeee
Q 033136 76 KPPPIGPKRGAKVKILRRESYWYNGIGSVVAVDQVRLFSIFLVYVTFNH 124 (126)
Q Consensus 76 kpppigp~RGskVrIlR~ESYWyn~vGtVvsVDq~~~~~rYPVvVRF~k 124 (126)
+-|-....-|+-|-+.-..--.| .|||+.||+++. +| +|+|++
T Consensus 21 ~~p~~~f~eGeDVLarwsDGlfY--LGTI~kV~~~~e--~C--lV~F~D 63 (79)
T 2m0o_A 21 SGPRPRLWEGQDVLARWTDGLLY--LGTIKKVDSARE--VC--LVQFED 63 (79)
T ss_dssp CSCCCCCCTTCEEEBCCTTSCCC--EEEEEEEETTTT--EE--EEEETT
T ss_pred cCCcceeccCCEEEEEecCCCEE--eEEEEEeccCCC--EE--EEEEcC
Confidence 34557889999998865555444 699999999876 54 678864
No 8
>2ckk_A KIN17; beta barrel, ribosomal protein, ribonucleoprotein, nuclear protein; 1.45A {Homo sapiens}
Probab=77.25 E-value=2.2 Score=30.47 Aligned_cols=39 Identities=13% Similarity=0.367 Sum_probs=30.8
Q ss_pred CCCCCCCCeeEEeeccceeccccceEEEEccCCceeeeeEEEEee
Q 033136 79 PIGPKRGAKVKILRRESYWYNGIGSVVAVDQVRLFSIFLVYVTFN 123 (126)
Q Consensus 79 pigp~RGskVrIlR~ESYWyn~vGtVvsVDq~~~~~rYPVvVRF~ 123 (126)
++=|+.|++|+|++-+ +=..+|++.++|.+ +|=++|+.+
T Consensus 68 TViP~~g~~V~Iv~G~--~rG~~g~L~~id~~----~~~~~V~l~ 106 (127)
T 2ckk_A 68 TVIPAPGKRILVLNGG--YRGNEGTLESINEK----TFSATIVIE 106 (127)
T ss_dssp ECCCCTTCEEEECSST--TTTCEEEEEEEEGG----GTEEEEEEC
T ss_pred EecCCCCCEEEEEecc--cCCcEEEEEEEeCC----CcEEEEEEc
Confidence 3456789999999987 56789999999986 466777765
No 9
>2equ_A PHD finger protein 20-like 1; tudor domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=74.86 E-value=6.2 Score=25.96 Aligned_cols=39 Identities=18% Similarity=0.250 Sum_probs=31.1
Q ss_pred CCCCCCCCeeEEeeccceeccccceEEEEccCCceeeeeEEEEeee
Q 033136 79 PIGPKRGAKVKILRRESYWYNGIGSVVAVDQVRLFSIFLVYVTFNH 124 (126)
Q Consensus 79 pigp~RGskVrIlR~ESYWyn~vGtVvsVDq~~~~~rYPVvVRF~k 124 (126)
+..+++|++|.-.=...-||. ++|.+||.++. +.|+|+.
T Consensus 7 ~~~~kvGd~clA~wsDg~~Y~--A~I~~v~~~~~-----~~V~f~D 45 (74)
T 2equ_A 7 GFDFKAGEEVLARWTDCRYYP--AKIEAINKEGT-----FTVQFYD 45 (74)
T ss_dssp CCCCCTTCEEEEECSSSSEEE--EEEEEESTTSS-----EEEEETT
T ss_pred CCCCCCCCEEEEECCCCCEEE--EEEEEECCCCE-----EEEEEec
Confidence 567899999998887778886 78999998753 4777753
No 10
>4a4f_A SurviVal of motor neuron-related-splicing factor; RNA binding protein; HET: 2MR; NMR {Homo sapiens} PDB: 4a4h_A*
Probab=69.89 E-value=14 Score=22.80 Aligned_cols=43 Identities=19% Similarity=0.249 Sum_probs=31.4
Q ss_pred CCCCCCCCCCCeeEEee-ccceeccccceEEEEccCCceeeeeEEEEeee
Q 033136 76 KPPPIGPKRGAKVKILR-RESYWYNGIGSVVAVDQVRLFSIFLVYVTFNH 124 (126)
Q Consensus 76 kpppigp~RGskVrIlR-~ESYWyn~vGtVvsVDq~~~~~rYPVvVRF~k 124 (126)
.||...++.|+++.-+= ...-||. ++|.+|+.+.. .+.|.|..
T Consensus 3 ~~~~~~~~vGd~c~A~~s~Dg~wYr--A~I~~v~~~~~----~~~V~fvd 46 (64)
T 4a4f_A 3 TQPTHSWKVGDKCMAVWSEDGQCYE--AEIEEIDEENG----TAAITFAG 46 (64)
T ss_dssp SCCSSCCCTTCEEEEECTTTSSEEE--EEEEEEETTTT----EEEEEETT
T ss_pred CCcCCCCCCCCEEEEEECCCCCEEE--EEEEEEcCCCC----EEEEEEEe
Confidence 34566789999999885 4677997 67999997533 25777754
No 11
>1eik_A RNA polymerase subunit RPB5; RPBH, OCSP, NESG, protein structure initiative, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus} SCOP: d.78.1.1
Probab=67.82 E-value=2.2 Score=28.99 Aligned_cols=16 Identities=56% Similarity=0.922 Sum_probs=14.2
Q ss_pred CCCCCCCCeeEEeecc
Q 033136 79 PIGPKRGAKVKILRRE 94 (126)
Q Consensus 79 pigp~RGskVrIlR~E 94 (126)
.+|.++|+.|||.|+-
T Consensus 48 ~~G~k~GdVvkI~R~S 63 (77)
T 1eik_A 48 AIGAKRGDIVKIIRKS 63 (77)
T ss_dssp GGGCCTTCEEEEEEEE
T ss_pred HhCCCCCCEEEEEECC
Confidence 4699999999999983
No 12
>1hmj_A RPB5, protein (subunit H); RNA polymerase, archaea; NMR {Methanocaldococcus jannaschii} SCOP: d.78.1.1
Probab=66.98 E-value=2.7 Score=28.70 Aligned_cols=15 Identities=40% Similarity=0.844 Sum_probs=14.1
Q ss_pred CCCCCCCCeeEEeec
Q 033136 79 PIGPKRGAKVKILRR 93 (126)
Q Consensus 79 pigp~RGskVrIlR~ 93 (126)
-+|.++|+.|||.|+
T Consensus 46 ~~G~k~GdVvkI~R~ 60 (78)
T 1hmj_A 46 EIGAKEGDVVRVIRK 60 (78)
T ss_pred HhCCCCCCEEEEEEC
Confidence 679999999999998
No 13
>1wxt_A Hypothetical protein FLJ21522; SH3 domain, EPS8-related protein 3, protein-protein interaction, structural genomics; NMR {Homo sapiens}
Probab=62.48 E-value=6.9 Score=23.43 Aligned_cols=22 Identities=18% Similarity=0.454 Sum_probs=18.9
Q ss_pred CCCCCCCCeeEEeeccceeccc
Q 033136 79 PIGPKRGAKVKILRRESYWYNG 100 (126)
Q Consensus 79 pigp~RGskVrIlR~ESYWyn~ 100 (126)
....++|+.|.|+.++.-|+..
T Consensus 23 eLs~~~Gd~i~v~~~~~~Ww~~ 44 (68)
T 1wxt_A 23 ELTVVQGEKLEVLDHSKRWWLV 44 (68)
T ss_dssp BCCBCTTCEEEEEECSSSEEEE
T ss_pred cCCCCCCCEEEEEEcCCCEEEE
Confidence 5678999999999999988853
No 14
>3p8b_B Transcription antitermination protein NUSG; transcription elongation factor, RNA polymerase, transferase transcription complex; 1.80A {Pyrococcus furiosus} PDB: 3qqc_D
Probab=61.15 E-value=14 Score=25.77 Aligned_cols=34 Identities=21% Similarity=0.314 Sum_probs=27.9
Q ss_pred CCCCCCCCCCeeEEeeccceeccccceEEEEccCCc
Q 033136 77 PPPIGPKRGAKVKILRRESYWYNGIGSVVAVDQVRL 112 (126)
Q Consensus 77 pppigp~RGskVrIlR~ESYWyn~vGtVvsVDq~~~ 112 (126)
++.+.++.|++|||.+- =+-+..|.|..||.+..
T Consensus 87 ~~~~~~~~Gd~VrI~~G--pf~g~~g~V~~vd~~k~ 120 (152)
T 3p8b_B 87 PAVSGLEPGDLVEVIAG--PFKGQKAKVVKIDESKD 120 (152)
T ss_dssp CTTTTCCTTCEEEECSS--TTTTCEEEEEEEETTTT
T ss_pred CccccCCCCCEEEEeee--cCCCCEEEEEEEeCCCC
Confidence 34678999999999874 47888999999998754
No 15
>1wxb_A Epidermal growth factor receptor pathway substrate 8-like protein; SH3, EPS8, EPS8L2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=60.88 E-value=7.5 Score=23.27 Aligned_cols=22 Identities=9% Similarity=0.336 Sum_probs=18.7
Q ss_pred CCCCCCCCeeEEeeccceeccc
Q 033136 79 PIGPKRGAKVKILRRESYWYNG 100 (126)
Q Consensus 79 pigp~RGskVrIlR~ESYWyn~ 100 (126)
....++|+.|.|+.++.-|+..
T Consensus 23 eLs~~~Gd~i~v~~~~~~Ww~~ 44 (68)
T 1wxb_A 23 ELSVLKDEVLEVLEDGRQWWKL 44 (68)
T ss_dssp BCCBCTTCEEEEEECSSSEEEE
T ss_pred ccCCCCCCEEEEEEcCCCEEEE
Confidence 5778999999999998888753
No 16
>2jw4_A Cytoplasmic protein NCK1; SH3 domain, phosphorylation, SH2 domain, signaling protein; NMR {Homo sapiens}
Probab=60.13 E-value=8 Score=23.50 Aligned_cols=23 Identities=13% Similarity=0.390 Sum_probs=19.1
Q ss_pred CCCCCCCCCeeEEeeccceeccc
Q 033136 78 PPIGPKRGAKVKILRRESYWYNG 100 (126)
Q Consensus 78 ppigp~RGskVrIlR~ESYWyn~ 100 (126)
.....++|+.|.|++++.-|+..
T Consensus 22 ~eLs~~~Gd~i~v~~~~~~Ww~g 44 (72)
T 2jw4_A 22 QELDIKKNERLWLLDDSKSWWRV 44 (72)
T ss_dssp TSCCCCTTCEEEEEECSSSSEEE
T ss_pred CcccCCCCCEEEEEECCCCEEEE
Confidence 36788999999999998888753
No 17
>2iim_A Proto-oncogene tyrosine-protein kinase LCK; beta-barrels, signaling protein; HET: PG4; 1.00A {Homo sapiens} SCOP: b.34.2.1 PDB: 1h92_A 1kik_A
Probab=58.97 E-value=8.6 Score=22.45 Aligned_cols=22 Identities=23% Similarity=0.740 Sum_probs=18.6
Q ss_pred CCCCCCCCeeEEeeccceeccc
Q 033136 79 PIGPKRGAKVKILRRESYWYNG 100 (126)
Q Consensus 79 pigp~RGskVrIlR~ESYWyn~ 100 (126)
....++|+.|.|+.++.-|+..
T Consensus 22 eLs~~~Gd~i~v~~~~~~Ww~g 43 (62)
T 2iim_A 22 DLGFEKGEQLRILEQSGEWWKA 43 (62)
T ss_dssp BCCBCTTCEEEEEECCSSEEEE
T ss_pred CcCCCCCCEEEEEEcCCCEEEE
Confidence 5778999999999998878743
No 18
>2v1q_A SLA1, cytoskeleton assembly control protein SLA1; structural genomics, phosphorylation, structural protein, yeast, SH3 domain; 1.2A {Saccharomyces cerevisiae} PDB: 1z9z_A
Probab=58.71 E-value=8.9 Score=21.99 Aligned_cols=22 Identities=32% Similarity=0.496 Sum_probs=17.6
Q ss_pred CCCCCCCCCeeEEeec--cceecc
Q 033136 78 PPIGPKRGAKVKILRR--ESYWYN 99 (126)
Q Consensus 78 ppigp~RGskVrIlR~--ESYWyn 99 (126)
.....++|+.|.|+.+ ++-|+.
T Consensus 17 ~eLs~~~Gd~i~v~~~~~~~~Ww~ 40 (60)
T 2v1q_A 17 DELTIKSGDKVYILDDKKSKDWWM 40 (60)
T ss_dssp TBCCBCTTCEEEEEESSSCSSEEE
T ss_pred CCccCCCCCEEEEEeCCCCCCCEE
Confidence 3678899999999997 566663
No 19
>2xk0_A Polycomb protein PCL; transcription, aromatic CAGE; NMR {Drosophila melanogaster}
Probab=58.10 E-value=37 Score=22.93 Aligned_cols=39 Identities=21% Similarity=0.399 Sum_probs=25.2
Q ss_pred CCCCCCCCCeeEEeeccceeccccceEEEEccCCceeeeeEEEEeee
Q 033136 78 PPIGPKRGAKVKILRRESYWYNGIGSVVAVDQVRLFSIFLVYVTFNH 124 (126)
Q Consensus 78 ppigp~RGskVrIlR~ESYWyn~vGtVvsVDq~~~~~rYPVvVRF~k 124 (126)
|.+.-+-|+-|-+.-..--.| .||| ||++.. =.+|||++
T Consensus 12 pa~~~~~geDVL~rw~DG~fY--LGtI--Vd~~~~----~ClV~FeD 50 (69)
T 2xk0_A 12 PAVTYALQEDVFIKCNDGRFY--LGTI--IDQTSD----QYLIRFDD 50 (69)
T ss_dssp CCCCCCTTCEEEEECTTSCEE--EEEE--EEECSS----CEEEEETT
T ss_pred cccccccCCeEEEEecCCCEE--EEEE--EecCCc----eEEEEecC
Confidence 348889999997653333333 6899 555432 35889975
No 20
>1wjq_A KIAA1798 protein; MBT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.34.9.3
Probab=58.05 E-value=18 Score=25.48 Aligned_cols=42 Identities=21% Similarity=0.410 Sum_probs=31.4
Q ss_pred CCCCCCCCCCeeEEeeccceeccccceEEEEccCCceeeeeEEEEeee
Q 033136 77 PPPIGPKRGAKVKILRRESYWYNGIGSVVAVDQVRLFSIFLVYVTFNH 124 (126)
Q Consensus 77 pppigp~RGskVrIlR~ESYWyn~vGtVvsVDq~~~~~rYPVvVRF~k 124 (126)
.|+.+.+.|.|+...-+..=+.--+-||+.|+-. =+.|+||.
T Consensus 9 ~p~~~F~~GMKLEAvD~~~p~~icvATV~~v~g~------rl~v~fDG 50 (107)
T 1wjq_A 9 KPPHGFQKKMKLEVVDKRNPMFIRVATVADTDDH------RVKVHFDG 50 (107)
T ss_dssp CCSSSCCSSCEEEEECTTCTTCEEEEEEEEECSS------CEEEECSS
T ss_pred CCcccCCCCCEEEEEcCCCCCcEEeEEEEEecCC------EEEEEeCC
Confidence 4578999999999987776555558888888433 36788875
No 21
>2b86_A Cytoplasmic protein NCK2; NCK SH3 domain, signaling protein; NMR {Homo sapiens} PDB: 2js2_A
Probab=56.86 E-value=10 Score=23.34 Aligned_cols=22 Identities=14% Similarity=0.410 Sum_probs=18.6
Q ss_pred CCCCCCCCeeEEeeccceeccc
Q 033136 79 PIGPKRGAKVKILRRESYWYNG 100 (126)
Q Consensus 79 pigp~RGskVrIlR~ESYWyn~ 100 (126)
....++|+.|.|+.+++-|+..
T Consensus 20 ELsf~~Gd~i~vl~~~~~Ww~~ 41 (67)
T 2b86_A 20 ELDIKKNERLWLLDDSKTWWRV 41 (67)
T ss_dssp SCCBCTTCEEEEEECSSSSCEE
T ss_pred ccccCCCCEEEEEecCCCeEEE
Confidence 5678999999999998888753
No 22
>3szh_A Avidin/streptavidin; high affinity systems, biotin, shwanav biotin-binding protein; 1.07A {Shewanella denitrificans} PDB: 3szi_A 3szj_A* 3t2x_A 3t2w_A
Probab=56.34 E-value=5.7 Score=29.05 Aligned_cols=17 Identities=29% Similarity=0.452 Sum_probs=13.5
Q ss_pred eccceeccccceEEEEc
Q 033136 92 RRESYWYNGIGSVVAVD 108 (126)
Q Consensus 92 R~ESYWyn~vGtVvsVD 108 (126)
---|.|+||.|++..|.
T Consensus 8 ~~~~tW~NqlGS~m~I~ 24 (122)
T 3szh_A 8 TAMSAWVNQDGSTLYIN 24 (122)
T ss_dssp CSSEEEECTTSCEEEEE
T ss_pred CCCceeEccCCCEEEEE
Confidence 34589999999987765
No 23
>4ay0_A Chaperone protein CAF1M; amino acid motifs, bacterial capsules, bacterial proteins, gene expression regulation, molecular chaperones, binding; 1.52A {Yersinia pestis} PDB: 1p5v_A 1p5u_A 1z9s_A 2os7_A 3dos_A 3dpb_A 3dsn_A 4b0m_M 4az8_A 4ayf_A
Probab=54.86 E-value=4.1 Score=30.96 Aligned_cols=20 Identities=25% Similarity=0.572 Sum_probs=16.7
Q ss_pred CCCCCCCeeEEee--------ccc-eecc
Q 033136 80 IGPKRGAKVKILR--------RES-YWYN 99 (126)
Q Consensus 80 igp~RGskVrIlR--------~ES-YWyn 99 (126)
+.|..+..|||++ +|| ||+|
T Consensus 70 l~p~~~q~lRI~~~~~~LP~DRESlf~ln 98 (218)
T 4ay0_A 70 LDAKQQNSLRIAQAGGVFPRDKESLKWLC 98 (218)
T ss_dssp ECTTCEEEEEEEECSCCCCSSSCEEEEEE
T ss_pred eCCCCceEEEEEecCCCCCcCcEEEEEEE
Confidence 5788999999987 387 8987
No 24
>1uhf_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, signaling protein; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=53.81 E-value=9.3 Score=23.00 Aligned_cols=22 Identities=9% Similarity=0.457 Sum_probs=18.6
Q ss_pred CCCCCCCCCeeEEeeccceecc
Q 033136 78 PPIGPKRGAKVKILRRESYWYN 99 (126)
Q Consensus 78 ppigp~RGskVrIlR~ESYWyn 99 (126)
.....++|+.|.|++++.-|+.
T Consensus 23 ~eLs~~~Gd~i~v~~~~~~Ww~ 44 (69)
T 1uhf_A 23 GDLTFTEGEEILVTQKDGEWWT 44 (69)
T ss_dssp SBCCBCTTCEEEECEEETTEEE
T ss_pred CccCCCCCCEEEEEEeCCCEEE
Confidence 3577899999999998887775
No 25
>4ayb_H DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2wb1_H 2y0s_H 2waq_H 4b1o_H 4b1p_Z 2pmz_H 3hkz_H
Probab=53.55 E-value=5.4 Score=27.13 Aligned_cols=15 Identities=33% Similarity=0.702 Sum_probs=13.9
Q ss_pred CCCCCCCCeeEEeec
Q 033136 79 PIGPKRGAKVKILRR 93 (126)
Q Consensus 79 pigp~RGskVrIlR~ 93 (126)
.+|.++|+.|||.|+
T Consensus 54 ~~g~k~GdVvkI~R~ 68 (84)
T 4ayb_H 54 SINAKPGDIIRIIRK 68 (84)
T ss_dssp HHTCCTTCEEEEEEE
T ss_pred hhCCCCCCEEEEEEc
Confidence 579999999999997
No 26
>2k2m_A EPS8-like protein 1; alternative splicing, coiled coil, cytoplasm, SH3 domain, signaling protein; NMR {Homo sapiens} PDB: 2rol_A
Probab=52.93 E-value=12 Score=22.49 Aligned_cols=22 Identities=14% Similarity=0.392 Sum_probs=18.4
Q ss_pred CCCCCCCCeeEEeeccceeccc
Q 033136 79 PIGPKRGAKVKILRRESYWYNG 100 (126)
Q Consensus 79 pigp~RGskVrIlR~ESYWyn~ 100 (126)
....++|+.|.|+.++.-|+..
T Consensus 24 eLs~~~Gd~i~v~~~~~~Ww~~ 45 (68)
T 2k2m_A 24 ELSVKQRDVLEVLDDSRKWWKV 45 (68)
T ss_dssp BCCBCTTCEEEEEECSSSEEEE
T ss_pred cccCCCCCEEEEEEcCCCeEEE
Confidence 5778999999999998777753
No 27
>1w1f_A Tyrosine-protein kinase LYN; SH3-domain, SH3 domain, tyrosine kinase, signal transduction; NMR {Homo sapiens} PDB: 1wa7_A
Probab=52.16 E-value=14 Score=21.50 Aligned_cols=22 Identities=27% Similarity=0.661 Sum_probs=18.0
Q ss_pred CCCCCCCCCeeEEeeccceecc
Q 033136 78 PPIGPKRGAKVKILRRESYWYN 99 (126)
Q Consensus 78 ppigp~RGskVrIlR~ESYWyn 99 (126)
.....++|+.|.|+.++.-|+.
T Consensus 22 ~eLs~~~Gd~i~v~~~~~~Ww~ 43 (65)
T 1w1f_A 22 DDLSFKKGEKMKVLEEHGEWWK 43 (65)
T ss_dssp SCCCBCTTCEEEEEEECSSEEE
T ss_pred CcCCCCCCCEEEEEEcCCCEEE
Confidence 3577899999999999776764
No 28
>2oi3_A Tyrosine-protein kinase HCK; human HCK, SH3, SRC-type tyrosine kinase, transferase; NMR {Homo sapiens} PDB: 2oj2_A 4hck_A 5hck_A
Probab=51.03 E-value=14 Score=22.73 Aligned_cols=22 Identities=14% Similarity=0.531 Sum_probs=18.7
Q ss_pred CCCCCCCCCeeEEeeccceecc
Q 033136 78 PPIGPKRGAKVKILRRESYWYN 99 (126)
Q Consensus 78 ppigp~RGskVrIlR~ESYWyn 99 (126)
.....++|+.|.|+.++.-|+.
T Consensus 40 ~eLs~~~Gd~i~v~~~~~~Ww~ 61 (86)
T 2oi3_A 40 EDLSFQKGDQMVVLEESGEWWK 61 (86)
T ss_dssp SCCCCCTTCEEEEEEESSSEEE
T ss_pred CcCcCCCCCEEEEEEcCCCeEE
Confidence 3578899999999999888874
No 29
>2djq_A SH3 domain containing ring finger 2; MUS musculus 0 DAY neonate head cDNA, riken FULL-length enriched library, clone:4831401O22, structural genomics; NMR {Mus musculus}
Probab=50.85 E-value=16 Score=21.58 Aligned_cols=22 Identities=18% Similarity=0.542 Sum_probs=17.4
Q ss_pred CCCCCCCCCeeEEeec-cceecc
Q 033136 78 PPIGPKRGAKVKILRR-ESYWYN 99 (126)
Q Consensus 78 ppigp~RGskVrIlR~-ESYWyn 99 (126)
.....++|+.|.|+.+ +.-|+.
T Consensus 22 ~eLs~~~Gd~i~v~~~~~~~Ww~ 44 (68)
T 2djq_A 22 GDLKFNKGDVILLRRQLDENWYQ 44 (68)
T ss_dssp TCCCCCTTCEEEEEECCCSSEEE
T ss_pred CCccCCCCCEEEEEEecCCCEEE
Confidence 3678899999999997 566664
No 30
>2vkn_A Protein SSU81; membrane, SH3 domain, transmembrane, membrane; 2.05A {Saccharomyces cerevisiae}
Probab=50.58 E-value=10 Score=22.69 Aligned_cols=22 Identities=14% Similarity=0.373 Sum_probs=18.8
Q ss_pred CCCCCCCCeeEEeeccceeccc
Q 033136 79 PIGPKRGAKVKILRRESYWYNG 100 (126)
Q Consensus 79 pigp~RGskVrIlR~ESYWyn~ 100 (126)
....++|+.|.|+.++.-|+..
T Consensus 23 eLsf~~Gd~i~v~~~~~~Ww~g 44 (70)
T 2vkn_A 23 EISFEQNEILQVSDIEGRWWKA 44 (70)
T ss_dssp BCCBCTTCEEEEECTTSSEEEE
T ss_pred cccCCCCCEEEEEEcCCCeEEE
Confidence 6778999999999998888753
No 31
>2d8j_A FYN-related kinase; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=50.58 E-value=12 Score=22.60 Aligned_cols=21 Identities=19% Similarity=0.510 Sum_probs=17.4
Q ss_pred CCCCCCCCeeEEeec-cceecc
Q 033136 79 PIGPKRGAKVKILRR-ESYWYN 99 (126)
Q Consensus 79 pigp~RGskVrIlR~-ESYWyn 99 (126)
....++|+.|.|+.+ +.-|+.
T Consensus 23 eLs~~~Gd~i~v~~~~~~~Ww~ 44 (77)
T 2d8j_A 23 DLSFRAGDKLQVLDTSHEGWWL 44 (77)
T ss_dssp BCCBCTTCCEEEEECCSSSEEE
T ss_pred ccCCCCCCEEEEEECCCCCeEE
Confidence 577899999999998 666764
No 32
>2do3_A Transcription elongation factor SPT5; KOW motif, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.34.5.5
Probab=50.06 E-value=12 Score=25.04 Aligned_cols=30 Identities=23% Similarity=0.237 Sum_probs=25.6
Q ss_pred CCCCCCCeeEEeeccceeccccceEEEEccCC
Q 033136 80 IGPKRGAKVKILRRESYWYNGIGSVVAVDQVR 111 (126)
Q Consensus 80 igp~RGskVrIlR~ESYWyn~vGtVvsVDq~~ 111 (126)
.-.+.|+-||++.- =|=++.|.|+.||.+-
T Consensus 16 K~F~~GDHVkVi~G--~~~getGlVV~v~~d~ 45 (69)
T 2do3_A 16 KYFKMGDHVKVIAG--RFEGDTGLIVRVEENF 45 (69)
T ss_dssp SSCCTTCEEEESSS--TTTTCEEEEEEECSSC
T ss_pred eeccCCCeEEEecc--EEcCceEEEEEEeCCE
Confidence 45678999999986 5789999999999873
No 33
>2cud_A SRC-like-adapter; SH3 domain, negative mitogenesis regulator, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=50.03 E-value=14 Score=22.93 Aligned_cols=22 Identities=27% Similarity=0.656 Sum_probs=18.3
Q ss_pred CCCCCCCCCeeEEeeccceecc
Q 033136 78 PPIGPKRGAKVKILRRESYWYN 99 (126)
Q Consensus 78 ppigp~RGskVrIlR~ESYWyn 99 (126)
.....++|+.++|+..+.-|+.
T Consensus 32 ~eLs~~~Gd~i~v~~~~~~Ww~ 53 (79)
T 2cud_A 32 SPPIFRRGEKLRVISDEGGWWK 53 (79)
T ss_dssp SCCSSCTTCEEEEEEEETTEEE
T ss_pred CcCCCCCCCEEEEEecCCCeEE
Confidence 3577899999999998777774
No 34
>1i07_A Epidermal growth factor receptor kinase substrate EPS8; hormone/growth factor; 1.80A {Mus musculus} SCOP: b.34.2.1 PDB: 1aoj_A 1i0c_A
Probab=49.92 E-value=12 Score=21.63 Aligned_cols=21 Identities=14% Similarity=0.450 Sum_probs=18.0
Q ss_pred CCCCCCCCeeEEeeccceecc
Q 033136 79 PIGPKRGAKVKILRRESYWYN 99 (126)
Q Consensus 79 pigp~RGskVrIlR~ESYWyn 99 (126)
....++|+.|.|+.+++-|+.
T Consensus 17 eLs~~~Gd~i~v~~~~~~Ww~ 37 (60)
T 1i07_A 17 ELSVMKDDVLEILDDRRQWWK 37 (60)
T ss_dssp BCCBCTTCEEEECGGGCCEEE
T ss_pred cccCCCCCEEEEEEcCCCeEE
Confidence 577899999999998887774
No 35
>1j3t_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=49.50 E-value=14 Score=22.36 Aligned_cols=21 Identities=10% Similarity=0.401 Sum_probs=17.9
Q ss_pred CCCCCCCCeeEEeeccceecc
Q 033136 79 PIGPKRGAKVKILRRESYWYN 99 (126)
Q Consensus 79 pigp~RGskVrIlR~ESYWyn 99 (126)
....++|+.|.|++++.-|+.
T Consensus 26 eLs~~~Gd~i~v~~~~~~Ww~ 46 (74)
T 1j3t_A 26 HLNFSKHDIITVLEQQENWWF 46 (74)
T ss_dssp BCCBCTTCEEEEEEECSSEEE
T ss_pred ccCCCCCCEEEEEecCCCEEE
Confidence 477899999999998887774
No 36
>2k9g_A SH3 domain-containing kinase-binding protein 1; CIN85, adaptor protein, downregulation, CBL, apoptosis, junction, cytoplasmic vesicle, cytoskeleton; NMR {Homo sapiens}
Probab=49.08 E-value=15 Score=22.05 Aligned_cols=22 Identities=23% Similarity=0.637 Sum_probs=17.8
Q ss_pred CCCCCCCCeeEEeec---cceeccc
Q 033136 79 PIGPKRGAKVKILRR---ESYWYNG 100 (126)
Q Consensus 79 pigp~RGskVrIlR~---ESYWyn~ 100 (126)
....++|+.|.|+.+ +.-|+..
T Consensus 25 eLs~~~Gd~i~v~~~~~~~~~W~~g 49 (73)
T 2k9g_A 25 ELTIKEGDIVTLINKDCIDVGWWEG 49 (73)
T ss_dssp BCCBCTTCEEEEEECCSSSTTEEEE
T ss_pred eeeECCCCEEEEEECCCCCCCEEEE
Confidence 578899999999998 5667643
No 37
>2jte_A CD2-associated protein; SH3 domain, coiled coil, cytoplasm, phosphorylation, SH3-binding, signaling protein; NMR {Mus musculus} PDB: 2kro_A
Probab=48.96 E-value=14 Score=21.55 Aligned_cols=21 Identities=14% Similarity=0.582 Sum_probs=16.6
Q ss_pred CCCCCCCCeeEEeec---cceecc
Q 033136 79 PIGPKRGAKVKILRR---ESYWYN 99 (126)
Q Consensus 79 pigp~RGskVrIlR~---ESYWyn 99 (126)
....++|+.|.|+.+ ++-|+.
T Consensus 22 eLs~~~Gd~i~v~~~~~~~~~W~~ 45 (64)
T 2jte_A 22 ELTFREGEIIHLISKETGEAGWWK 45 (64)
T ss_dssp BCCBCTTCEEEEEESCSSSTTEEE
T ss_pred ccCCCCCCEEEEEECCCCCCCEEE
Confidence 577899999999987 455554
No 38
>1vq8_T 50S ribosomal protein L24P; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: b.34.5.1 PDB: 1vq4_T* 1vq5_T* 1vq6_T* 1vq7_T* 1s72_T* 1vq9_T* 1vqk_T* 1vql_T* 1vqm_T* 1vqn_T* 1vqo_T* 1vqp_T* 1yhq_T* 1yi2_T* 1yij_T* 1yit_T* 1yj9_T* 1yjn_T* 1yjw_T* 2otj_T* ...
Probab=48.71 E-value=15 Score=26.45 Aligned_cols=30 Identities=27% Similarity=0.403 Sum_probs=24.1
Q ss_pred CCCCCCCeeEEeeccceeccccceEEEEccCC
Q 033136 80 IGPKRGAKVKILRRESYWYNGIGSVVAVDQVR 111 (126)
Q Consensus 80 igp~RGskVrIlR~ESYWyn~vGtVvsVDq~~ 111 (126)
.-+++||.|.|++-.. -...|+|..||...
T Consensus 41 ~~IkkGD~V~Vi~G~d--KGk~GkV~~V~~k~ 70 (120)
T 1vq8_T 41 VRVNAGDTVEVLRGDF--AGEEGEVINVDLDK 70 (120)
T ss_dssp EECCTTCEEEECSSTT--TTCEEEEEEEETTT
T ss_pred ccccCCCEEEEEecCC--CCCEEEEEEEECCC
Confidence 3589999999999752 35789999999763
No 39
>1ue9_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=48.50 E-value=16 Score=22.35 Aligned_cols=21 Identities=24% Similarity=0.559 Sum_probs=16.7
Q ss_pred CCCCCCCCeeEEeec-cceecc
Q 033136 79 PIGPKRGAKVKILRR-ESYWYN 99 (126)
Q Consensus 79 pigp~RGskVrIlR~-ESYWyn 99 (126)
....++|+.|.|+.+ ++-|+.
T Consensus 23 eLs~~~Gd~i~v~~~~~~gWw~ 44 (80)
T 1ue9_A 23 QLSLAPGQLILILKKNTSGWWQ 44 (80)
T ss_dssp BCCCCTTCEEEEEEECSSSEEE
T ss_pred CCCCCCCCEEEEEEecCCCcEE
Confidence 578899999999997 555653
No 40
>1k1z_A VAV; SH3, proto-oncogene, signaling protein; NMR {Mus musculus} SCOP: b.34.2.1
Probab=48.24 E-value=14 Score=22.53 Aligned_cols=23 Identities=22% Similarity=0.497 Sum_probs=18.2
Q ss_pred CCCCCCCCCeeEEeec--cceeccc
Q 033136 78 PPIGPKRGAKVKILRR--ESYWYNG 100 (126)
Q Consensus 78 ppigp~RGskVrIlR~--ESYWyn~ 100 (126)
.....++|+.|.|+.+ ++-|+..
T Consensus 33 ~eLsf~~Gd~i~v~~~~~~~gWw~g 57 (78)
T 1k1z_A 33 GFLRLNPGDIVELTKAEAEHNWWEG 57 (78)
T ss_dssp CCCCBCTTCEEEEEECCSSCSCEEE
T ss_pred CccCCCCCCEEEEEEcCCCCCeEEE
Confidence 4577899999999998 4777653
No 41
>1x2p_A Protein arginine N-methyltransferase 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=47.82 E-value=16 Score=21.55 Aligned_cols=21 Identities=33% Similarity=0.631 Sum_probs=16.5
Q ss_pred CCCCCCCCeeEEeec-cceecc
Q 033136 79 PIGPKRGAKVKILRR-ESYWYN 99 (126)
Q Consensus 79 pigp~RGskVrIlR~-ESYWyn 99 (126)
....++|+.|.|+++ +.-|+.
T Consensus 23 eLs~~~Gd~i~v~~~~~~~Ww~ 44 (68)
T 1x2p_A 23 QLSFLRGEKILILRQTTADWWW 44 (68)
T ss_dssp BCCCCTTCEEEEEECCSSSEEE
T ss_pred CcCCCCCCEEEEEEcCCCCEEE
Confidence 577899999999997 455553
No 42
>3ew1_A Rhizavidin; high affinity, biotin, unknown function; 1.50A {Rhizobium etli} PDB: 3ew2_A*
Probab=47.81 E-value=7 Score=28.96 Aligned_cols=21 Identities=29% Similarity=0.401 Sum_probs=16.0
Q ss_pred EeeccceeccccceEEEEccC
Q 033136 90 ILRRESYWYNGIGSVVAVDQV 110 (126)
Q Consensus 90 IlR~ESYWyn~vGtVvsVDq~ 110 (126)
|---+..||||.|++..|..+
T Consensus 12 ~~~~~GtW~NqlGS~m~I~~~ 32 (135)
T 3ew1_A 12 IASASSSWQNQSGSTMIIQVD 32 (135)
T ss_dssp TBTSEEEEEETTSCEEEEEEC
T ss_pred hhcCceeEEcCCCCEEEEEEC
Confidence 334567899999999888644
No 43
>2jt4_A Cytoskeleton assembly control protein SLA1; endocytosis, SH3, actin-binding, cytoplasm, cytoskeleton, phosphorylation, SH3 domain, DNA damage, DNA repair, nucleus; NMR {Saccharomyces cerevisiae}
Probab=47.74 E-value=16 Score=21.64 Aligned_cols=21 Identities=33% Similarity=0.531 Sum_probs=17.0
Q ss_pred CCCCCCCCeeEEeec--cceecc
Q 033136 79 PIGPKRGAKVKILRR--ESYWYN 99 (126)
Q Consensus 79 pigp~RGskVrIlR~--ESYWyn 99 (126)
....++|+.|.|+.+ +.-|+.
T Consensus 22 eLs~~~Gd~i~v~~~~~~~~Ww~ 44 (71)
T 2jt4_A 22 ELTIKSGDKVYILDDKKSKDWWM 44 (71)
T ss_dssp BCCBCTTCEEEEEESSSCSSEEE
T ss_pred cccCCCCCEEEEEECCCCCCCEE
Confidence 577899999999997 566653
No 44
>2vwf_A Growth factor receptor-bound protein 2; polymorphism, phosphoprotein, golgi apparatus, alternative splicing, HOST-virus interaction, SH3C, signaling; 1.58A {Homo sapiens} PDB: 2w0z_A 1gcq_A 1gfc_A 1gfd_A 1io6_A 2vvk_A
Probab=46.98 E-value=18 Score=20.58 Aligned_cols=21 Identities=19% Similarity=0.729 Sum_probs=16.3
Q ss_pred CCCCCCCCeeEEeec-cceecc
Q 033136 79 PIGPKRGAKVKILRR-ESYWYN 99 (126)
Q Consensus 79 pigp~RGskVrIlR~-ESYWyn 99 (126)
....++|+.|.|+.+ ++-|+.
T Consensus 18 eLs~~~Gd~i~v~~~~~~~Ww~ 39 (58)
T 2vwf_A 18 ELGFRRGDFIHVMDNSDPNWWK 39 (58)
T ss_dssp BCCBCTTCEEEEEECCSSSEEE
T ss_pred CcCCCCCCEEEEEEcCCCCEEE
Confidence 577899999999987 445553
No 45
>2x3w_D Syndapin I, protein kinase C and casein kinase substrate in N protein 1; endocytosis, N-WAsp, dynamin, pacsin I, transferase; 2.64A {Mus musculus} PDB: 2x3x_D
Probab=46.59 E-value=15 Score=21.04 Aligned_cols=22 Identities=23% Similarity=0.385 Sum_probs=16.7
Q ss_pred CCCCCCCCCeeEEeecc--ceecc
Q 033136 78 PPIGPKRGAKVKILRRE--SYWYN 99 (126)
Q Consensus 78 ppigp~RGskVrIlR~E--SYWyn 99 (126)
.....++|+.|.|++++ +-|+.
T Consensus 18 ~eLs~~~Gd~i~v~~~~~~~~W~~ 41 (60)
T 2x3w_D 18 DELSFKAGDELTKLGEEDEQGWCR 41 (60)
T ss_dssp SBCCBCTTCEEEECSCCCSSSEEE
T ss_pred CcccCCCCCEEEEEEccCCCCceE
Confidence 36778999999999874 35553
No 46
>1zuy_A Myosin-5 isoform; SH3 domain, contractIle protein; 1.39A {Saccharomyces cerevisiae} PDB: 1yp5_A
Probab=46.15 E-value=20 Score=20.29 Aligned_cols=21 Identities=29% Similarity=0.447 Sum_probs=16.2
Q ss_pred CCCCCCCCCeeEEeec-cceec
Q 033136 78 PPIGPKRGAKVKILRR-ESYWY 98 (126)
Q Consensus 78 ppigp~RGskVrIlR~-ESYWy 98 (126)
.....++|+.|.|+.+ ++-|+
T Consensus 16 ~eLs~~~Gd~i~v~~~~~~gW~ 37 (58)
T 1zuy_A 16 SELPLKKGDVIYITREEPSGWS 37 (58)
T ss_dssp TBCCBCTTCEEEEEEECTTSEE
T ss_pred CcCCCCCCCEEEEEEecCCCeE
Confidence 3577899999999987 44454
No 47
>2cre_A HEF-like protein; SH3 domain, SRC homology 3 domain, beta barrel, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=45.80 E-value=16 Score=21.62 Aligned_cols=21 Identities=24% Similarity=0.561 Sum_probs=17.4
Q ss_pred CCCCCCCCeeEEeec----cceecc
Q 033136 79 PIGPKRGAKVKILRR----ESYWYN 99 (126)
Q Consensus 79 pigp~RGskVrIlR~----ESYWyn 99 (126)
....++|+.|.|+.+ +.-|+.
T Consensus 23 eLs~~~Gd~i~v~~~~~~~~~~Ww~ 47 (71)
T 2cre_A 23 ELAFSRGDILTILEQHVPESEGWWK 47 (71)
T ss_dssp BCCCCSSCCEEEEESCCTTSTTEEE
T ss_pred CCCCCCCCEEEEeEcCCCCCCCcEE
Confidence 577899999999998 577765
No 48
>1y0m_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1; SH3 domain, hydrolase; 1.20A {Rattus norvegicus} PDB: 1ywp_A 1ywo_A
Probab=45.77 E-value=19 Score=20.85 Aligned_cols=21 Identities=10% Similarity=0.403 Sum_probs=17.0
Q ss_pred CCCCCCCCeeEEeec-cceecc
Q 033136 79 PIGPKRGAKVKILRR-ESYWYN 99 (126)
Q Consensus 79 pigp~RGskVrIlR~-ESYWyn 99 (126)
....++|+.|.|+.+ ++-|+.
T Consensus 19 eLs~~~Gd~i~v~~~~~~~W~~ 40 (61)
T 1y0m_A 19 ELTFTKSAIIQNVEKQDGGWWR 40 (61)
T ss_dssp BCCBCTTCEEEEEECCSSSEEE
T ss_pred CcCCcCCCEEEEEEecCCCEEE
Confidence 577899999999997 666664
No 49
>1gcq_C VAV proto-oncogene; SH3 domain, protein-protein complex, GRB2,VAV, signaling protein/signaling protein complex; 1.68A {Mus musculus} SCOP: b.34.2.1 PDB: 1gcp_A
Probab=45.58 E-value=15 Score=21.78 Aligned_cols=22 Identities=23% Similarity=0.543 Sum_probs=17.5
Q ss_pred CCCCCCCCeeEEeec--cceeccc
Q 033136 79 PIGPKRGAKVKILRR--ESYWYNG 100 (126)
Q Consensus 79 pigp~RGskVrIlR~--ESYWyn~ 100 (126)
....++|+.|.|+.+ +.-|+..
T Consensus 26 eLsf~~Gd~i~v~~~~~~~~Ww~g 49 (70)
T 1gcq_C 26 FLRLNPGDIVELTKAEAEHNWWEG 49 (70)
T ss_dssp BCCBCTTCEEEEEECCTTCSEEEE
T ss_pred cCCcCCCCEEEEEeCCCCCCCeEE
Confidence 577899999999998 4566643
No 50
>2dl3_A Sorbin and SH3 domain-containing protein 1; ponsin, C-CBL-associated protein, CAP, SH3 domain protein 5 SH3P12, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2dlm_A
Probab=45.50 E-value=19 Score=21.23 Aligned_cols=21 Identities=24% Similarity=0.646 Sum_probs=16.6
Q ss_pred CCCCCCCCeeEEeec-cceecc
Q 033136 79 PIGPKRGAKVKILRR-ESYWYN 99 (126)
Q Consensus 79 pigp~RGskVrIlR~-ESYWyn 99 (126)
....++|+.|.|+.+ +.-|+.
T Consensus 23 eLs~~~Gd~i~v~~~~~~~W~~ 44 (68)
T 2dl3_A 23 ELPLQKGDIVYIYKQIDQNWYE 44 (68)
T ss_dssp BCCBCTTCEEEEEECCSTTEEE
T ss_pred CccCCCCCEEEEeEecCCCEEE
Confidence 577899999999987 455654
No 51
>2e6z_A Transcription elongation factor SPT5; KOW motif, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=45.38 E-value=15 Score=22.66 Aligned_cols=30 Identities=27% Similarity=0.357 Sum_probs=24.6
Q ss_pred CCCCCCCCeeEEeeccceeccccceEEEEccC
Q 033136 79 PIGPKRGAKVKILRRESYWYNGIGSVVAVDQV 110 (126)
Q Consensus 79 pigp~RGskVrIlR~ESYWyn~vGtVvsVDq~ 110 (126)
.+..+.|+.|+|..-+ |=+-.|+|..||.+
T Consensus 5 ~~~f~~GD~V~V~~Gp--f~g~~G~V~evd~e 34 (59)
T 2e6z_A 5 SSGFQPGDNVEVCEGE--LINLQGKILSVDGN 34 (59)
T ss_dssp CSSCCTTSEEEECSST--TTTCEEEECCCBTT
T ss_pred cccCCCCCEEEEeecC--CCCCEEEEEEEeCC
Confidence 4567899999999765 67778999999875
No 52
>1k4u_S Phagocyte NADPH oxidase subunit P67PHOX; SH3-peptide complex, helix-turn-helix, hormone/growth factor complex; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=45.37 E-value=17 Score=21.11 Aligned_cols=21 Identities=14% Similarity=0.441 Sum_probs=16.8
Q ss_pred CCCCCCCCeeEEeec-cceecc
Q 033136 79 PIGPKRGAKVKILRR-ESYWYN 99 (126)
Q Consensus 79 pigp~RGskVrIlR~-ESYWyn 99 (126)
....++|+.|.|+.+ ++-|+.
T Consensus 21 eLs~~~Gd~i~v~~~~~~~Ww~ 42 (62)
T 1k4u_S 21 DLEFQEGDIILVLSKVNEEWLE 42 (62)
T ss_dssp BCCBCSSCEEEEEEESSSSCEE
T ss_pred CccCCCCCEEEEEEeCCCCEEE
Confidence 577899999999997 555654
No 53
>1zx6_A YPR154WP; SH3 domain, protein binding; 1.60A {Saccharomyces cerevisiae} PDB: 1ynz_A
Probab=44.80 E-value=20 Score=20.54 Aligned_cols=21 Identities=38% Similarity=0.852 Sum_probs=16.8
Q ss_pred CCCCCCCCeeEEeec-cceecc
Q 033136 79 PIGPKRGAKVKILRR-ESYWYN 99 (126)
Q Consensus 79 pigp~RGskVrIlR~-ESYWyn 99 (126)
....++|+.|.|+.+ ++-|+.
T Consensus 18 eLs~~~Gd~i~v~~~~~~~Ww~ 39 (58)
T 1zx6_A 18 DLGLKPGDKVQLLEKLSPEWYK 39 (58)
T ss_dssp BCCBCTTCEEEEEEECSSSEEE
T ss_pred CccCCCCCEEEEEEecCCCEEE
Confidence 577899999999987 556654
No 54
>2dil_A Proline-serine-threonine phosphatase-interacting protein 1; SH3 domain, PEST phosphatase-interacting protein 1, CD2- binding protein 1; NMR {Homo sapiens}
Probab=44.62 E-value=22 Score=21.03 Aligned_cols=21 Identities=14% Similarity=0.474 Sum_probs=16.7
Q ss_pred CCCCCCCCeeEEeec-cceecc
Q 033136 79 PIGPKRGAKVKILRR-ESYWYN 99 (126)
Q Consensus 79 pigp~RGskVrIlR~-ESYWyn 99 (126)
....++|+.|.|+.+ +.-|+.
T Consensus 24 eLs~~~Gd~i~v~~~~~~~Ww~ 45 (69)
T 2dil_A 24 ELDLSAGDILEVILEGEDGWWT 45 (69)
T ss_dssp SCCBCTTCEEEEEECCSSSEEE
T ss_pred ccCCCCCCEEEEEECCCCCEEE
Confidence 678899999999987 455553
No 55
>1ruw_A Myosin-3 isoform, MYO3; SH3 domain, yeast, high-throughput, structural genomics, contractIle protein; 1.80A {Saccharomyces cerevisiae} PDB: 2btt_A 1va7_A
Probab=44.54 E-value=21 Score=21.16 Aligned_cols=21 Identities=33% Similarity=0.403 Sum_probs=16.3
Q ss_pred CCCCCCCCCeeEEeec-cceec
Q 033136 78 PPIGPKRGAKVKILRR-ESYWY 98 (126)
Q Consensus 78 ppigp~RGskVrIlR~-ESYWy 98 (126)
.....++|+.|.|+.+ ++-|+
T Consensus 18 ~eLs~~~Gd~i~v~~~~~~~W~ 39 (69)
T 1ruw_A 18 SELPLKKGDIVFISRDEPSGWS 39 (69)
T ss_dssp TBCCBCTTCEEEEEEECTTSEE
T ss_pred CcccCCCCCEEEEEEecCCCeE
Confidence 3577899999999997 45454
No 56
>2da9_A SH3-domain kinase binding protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=44.22 E-value=17 Score=21.60 Aligned_cols=21 Identities=19% Similarity=0.563 Sum_probs=17.0
Q ss_pred CCCCCCCCeeEEeec---cceecc
Q 033136 79 PIGPKRGAKVKILRR---ESYWYN 99 (126)
Q Consensus 79 pigp~RGskVrIlR~---ESYWyn 99 (126)
....++|+.|.|+.+ +.-|+.
T Consensus 23 eLs~~~Gd~i~v~~~~~~~~~W~~ 46 (70)
T 2da9_A 23 ELTIKEGDIVTLINKDCIDVGWWE 46 (70)
T ss_dssp BCCCCTTEEEEEEECCCSSTTEEE
T ss_pred EeeEcCCCEEEEEECCCCCCCeEE
Confidence 577899999999997 566664
No 57
>1zuu_A BZZ1 protein; SH3 domain, unknown function; 0.97A {Saccharomyces cerevisiae} SCOP: b.34.2.1
Probab=44.10 E-value=19 Score=20.47 Aligned_cols=22 Identities=27% Similarity=0.511 Sum_probs=17.2
Q ss_pred CCCCCCCCCeeEEeecc--ceecc
Q 033136 78 PPIGPKRGAKVKILRRE--SYWYN 99 (126)
Q Consensus 78 ppigp~RGskVrIlR~E--SYWyn 99 (126)
.....++|+.|.|+.++ +-|+.
T Consensus 16 ~eLs~~~Gd~i~v~~~~~~~~W~~ 39 (58)
T 1zuu_A 16 DEITITPGDKISLVARDTGSGWTK 39 (58)
T ss_dssp TBCCBCTTCCEEEEECCSSSSEEE
T ss_pred CcccCCCCCEEEEeEcCCCCCCEE
Confidence 36778999999999986 45653
No 58
>2xmf_A Myosin 1E SH3; motor protein, SH3 domain; HET: DIA; 1.50A {Mus musculus}
Probab=44.01 E-value=21 Score=20.53 Aligned_cols=22 Identities=14% Similarity=0.401 Sum_probs=16.9
Q ss_pred CCCCCCCCCeeEEeec-cceecc
Q 033136 78 PPIGPKRGAKVKILRR-ESYWYN 99 (126)
Q Consensus 78 ppigp~RGskVrIlR~-ESYWyn 99 (126)
.....++|+.|.|+.+ ++-|+.
T Consensus 20 ~eLs~~~Gd~i~v~~~~~~~Ww~ 42 (60)
T 2xmf_A 20 DELSFNANDIIDIIKEDPSGWWT 42 (60)
T ss_dssp TBCCBCTTCEEEEEEECTTSEEE
T ss_pred CCcCCCCCCEEEEEEecCCCEEE
Confidence 3577899999999997 455653
No 59
>2jmc_A Spectrin alpha chain, brain and P41 peptide chimera; SPC-SH3, signaling protein; NMR {Gallus gallus}
Probab=43.99 E-value=17 Score=22.38 Aligned_cols=22 Identities=18% Similarity=0.522 Sum_probs=17.0
Q ss_pred CCCCCCCCCeeEEeec-cceecc
Q 033136 78 PPIGPKRGAKVKILRR-ESYWYN 99 (126)
Q Consensus 78 ppigp~RGskVrIlR~-ESYWyn 99 (126)
-....++|+.|.|+++ ++-|+.
T Consensus 6 ~eLs~~~Gd~i~v~~~~~~~Ww~ 28 (77)
T 2jmc_A 6 REVTMKKGDILTLLNSTNKDWWK 28 (77)
T ss_dssp CCCCCCTTCEEECCCCCCSSCCC
T ss_pred CccCCCCCCEEEEEEecCCCEEE
Confidence 3567899999999997 555654
No 60
>1u5s_A Cytoplasmic protein NCK2; protein-protein complex, beta barrel, beta sheet, zinc finger, metal binding protein; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 2fry_A
Probab=43.99 E-value=18 Score=21.46 Aligned_cols=21 Identities=10% Similarity=0.648 Sum_probs=17.2
Q ss_pred CCCCCCCCeeEEeec---cceecc
Q 033136 79 PIGPKRGAKVKILRR---ESYWYN 99 (126)
Q Consensus 79 pigp~RGskVrIlR~---ESYWyn 99 (126)
....++|+.|.|+.+ ++-|+.
T Consensus 22 eLs~~~Gd~i~v~~~~~~~~~Ww~ 45 (71)
T 1u5s_A 22 ELNFEKGETMEVIEKPENDPEWWK 45 (71)
T ss_dssp BCCCCSSCCEEEEECCCTTTCEEE
T ss_pred cccCCCCCEEEEEECCCCCCCCEE
Confidence 577899999999998 566664
No 61
>2enm_A Sorting nexin-9; SH3-like barrel, protein transport, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=43.84 E-value=19 Score=21.82 Aligned_cols=22 Identities=14% Similarity=0.422 Sum_probs=17.6
Q ss_pred CCCCCCCCeeEEeecc--ceeccc
Q 033136 79 PIGPKRGAKVKILRRE--SYWYNG 100 (126)
Q Consensus 79 pigp~RGskVrIlR~E--SYWyn~ 100 (126)
....++|+.|.|++++ +-|+..
T Consensus 26 eLs~~~Gd~i~v~~~~~~~gW~~g 49 (77)
T 2enm_A 26 ELTVTEGEIITVTNPNVGGGWLEG 49 (77)
T ss_dssp BCCCCTTCEEEEEESCCSSSEEEE
T ss_pred eecCCCCCEEEEeEccCCCCeEEE
Confidence 5778999999999974 777643
No 62
>2yun_A Nostrin; nitric oxide synthase trafficker, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=43.69 E-value=20 Score=21.87 Aligned_cols=21 Identities=24% Similarity=0.477 Sum_probs=16.5
Q ss_pred CCCCCCCCeeEEeec-cceecc
Q 033136 79 PIGPKRGAKVKILRR-ESYWYN 99 (126)
Q Consensus 79 pigp~RGskVrIlR~-ESYWyn 99 (126)
....++|+.|.|+.+ +.-|+.
T Consensus 23 eLs~~~Gd~i~v~~~~~~~Ww~ 44 (79)
T 2yun_A 23 ELNLEKGDIVIIHEKKEEGWWF 44 (79)
T ss_dssp BCCBCTTCEEEEEECCSSSCEE
T ss_pred CcCCCCCCEEEEEEcCCCCEEE
Confidence 577899999999987 455654
No 63
>2cuc_A SH3 domain containing ring finger 2; structural genomics, ring finger 2 containing protein, NPPSFA; NMR {Mus musculus}
Probab=43.56 E-value=20 Score=21.15 Aligned_cols=22 Identities=14% Similarity=0.563 Sum_probs=16.9
Q ss_pred CCCCCCCCCeeEEeec-cceecc
Q 033136 78 PPIGPKRGAKVKILRR-ESYWYN 99 (126)
Q Consensus 78 ppigp~RGskVrIlR~-ESYWyn 99 (126)
.....++|+.|.|+.+ +.-|+.
T Consensus 22 ~eLs~~~Gd~i~v~~~~~~~Ww~ 44 (70)
T 2cuc_A 22 EELDLQKGEGIRVLGKYQDGWLK 44 (70)
T ss_dssp TBCCBCTTCEEEEEEEEETTEEE
T ss_pred CcCCCCCCCEEEEEEecCCCeEE
Confidence 3577899999999997 345553
No 64
>2oaw_A Spectrin alpha chain, brain; SH3 domain, chimera, structural protein; 1.90A {Gallus gallus} PDB: 2rot_A 2rmo_A 2kr3_A
Probab=43.42 E-value=21 Score=20.58 Aligned_cols=21 Identities=19% Similarity=0.534 Sum_probs=16.8
Q ss_pred CCCCCCCCCeeEEeec-cceec
Q 033136 78 PPIGPKRGAKVKILRR-ESYWY 98 (126)
Q Consensus 78 ppigp~RGskVrIlR~-ESYWy 98 (126)
.....++|+.|.|+.+ ++-|+
T Consensus 16 ~eLs~~~Gd~i~v~~~~~~~Ww 37 (65)
T 2oaw_A 16 REVTMKKGDILTLLNSTNKDWW 37 (65)
T ss_dssp TBCCBCTTCEEEEEECCSSSEE
T ss_pred CCCCCCCCCEEEEEEcCCCCEE
Confidence 3577899999999997 45665
No 65
>2j6f_A CD2-associated protein; metal-binding, immune response, SH3, SH2 domain, SH3 zinc-finger, SH3- binding, UBL conjugation pathway; 1.7A {Homo sapiens} PDB: 2j6k_A 2j6o_A 2j7i_A 2krm_A
Probab=43.21 E-value=21 Score=20.76 Aligned_cols=21 Identities=14% Similarity=0.460 Sum_probs=17.2
Q ss_pred CCCCCCCCeeEEeec--cceecc
Q 033136 79 PIGPKRGAKVKILRR--ESYWYN 99 (126)
Q Consensus 79 pigp~RGskVrIlR~--ESYWyn 99 (126)
....++|+.|.|+++ ++-|+.
T Consensus 17 eLs~~~Gd~i~v~~~~~~~~Ww~ 39 (62)
T 2j6f_A 17 ELTIRVGEIIRNVKKLQEEGWLE 39 (62)
T ss_dssp BCCBCTTCEEEEEEECSSTTEEE
T ss_pred CcCCcCCCEEEEEEecCCCCEEE
Confidence 577899999999997 666664
No 66
>3dlm_A Histone-lysine N-methyltransferase setdb1; setdb1_human, structural genomics, structural genomics consortium, SGC, alternative splicing; 1.77A {Homo sapiens}
Probab=43.20 E-value=40 Score=26.65 Aligned_cols=41 Identities=27% Similarity=0.395 Sum_probs=32.8
Q ss_pred CCCCCCCCCCCCeeEEeeccceeccccceEEEEccCCceeeeeEEEEeee
Q 033136 75 PKPPPIGPKRGAKVKILRRESYWYNGIGSVVAVDQVRLFSIFLVYVTFNH 124 (126)
Q Consensus 75 ~kpppigp~RGskVrIlR~ESYWyn~vGtVvsVDq~~~~~rYPVvVRF~k 124 (126)
|-.|-+-.++|+.+++-|..-.|+ .+|..||-|- |.|+|+.
T Consensus 152 P~rpmv~~~~GQ~i~~E~~g~w~~---~~V~~vD~SL------v~v~f~~ 192 (213)
T 3dlm_A 152 PNRPMVLLKSGQLIKTEWEGTWWK---SRVEEVDGSL------VRILFLD 192 (213)
T ss_dssp TCCCCCCCCTTCEEEEEETTEEEE---EEEEEEETTE------EEEEETT
T ss_pred CCCceEEcCCCCEEEEEecCcEEE---EEEEEEccee------EEEEEcC
Confidence 456677889999999988877765 6899999984 6777764
No 67
>1x6b_A RHO guanine exchange factor (GEF) 16; SH3 domain, neuroblastoma, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=42.94 E-value=16 Score=22.42 Aligned_cols=22 Identities=18% Similarity=0.369 Sum_probs=18.2
Q ss_pred CCCCCCCCCeeEEeeccceecc
Q 033136 78 PPIGPKRGAKVKILRRESYWYN 99 (126)
Q Consensus 78 ppigp~RGskVrIlR~ESYWyn 99 (126)
.....++|+.|.|++++.-|+.
T Consensus 32 ~eLs~~~Gd~i~v~~~~~gW~~ 53 (79)
T 1x6b_A 32 DEVTLQQADVVLVLQQEDGWLY 53 (79)
T ss_dssp SBCCCCTTEEEEEEEEETTEEE
T ss_pred CCcCCCCCCEEEEEEeCCCEEE
Confidence 3577899999999998877774
No 68
>2kxd_A 11-MER peptide, SH3 domain of spectrin alpha CHAI; alpha spectrin SH3 domain, SPC-S19P20S circular permutant, S protein; NMR {Synthetic}
Probab=42.94 E-value=20 Score=21.66 Aligned_cols=23 Identities=17% Similarity=0.476 Sum_probs=17.8
Q ss_pred CCCCCCCCCCeeEEeec-cceecc
Q 033136 77 PPPIGPKRGAKVKILRR-ESYWYN 99 (126)
Q Consensus 77 pppigp~RGskVrIlR~-ESYWyn 99 (126)
+-....++|+.|.|+.+ ++-|+.
T Consensus 13 ~~eLs~~~Gd~i~v~~~~~~~Ww~ 36 (73)
T 2kxd_A 13 GREVTMKKGDILTLLNSTNKDWWK 36 (73)
T ss_dssp SCCCCBCTTCEEEEEECCSSSEEE
T ss_pred CCEeeEcCCCEEEEEEecCCCEEE
Confidence 34678899999999997 556654
No 69
>2ydl_A SH3 domain-containing kinase-binding protein 1; signaling protein; 2.05A {Homo sapiens} PDB: 2k6d_A
Probab=42.94 E-value=21 Score=21.73 Aligned_cols=21 Identities=19% Similarity=0.563 Sum_probs=17.0
Q ss_pred CCCCCCCCeeEEeec---cceecc
Q 033136 79 PIGPKRGAKVKILRR---ESYWYN 99 (126)
Q Consensus 79 pigp~RGskVrIlR~---ESYWyn 99 (126)
....++|+.|.|+++ ++-|+.
T Consensus 18 eLs~~~Gd~i~vl~~~~~~~gWw~ 41 (69)
T 2ydl_A 18 ELTIKEGDIVTLINKDCIDVGWWE 41 (69)
T ss_dssp BCCBCTTCEEEEEESCCSSTTEEE
T ss_pred ccccCCCCEEEEEEcCCCCCCEEE
Confidence 577899999999998 566664
No 70
>2ct3_A Vinexin; SH3 domian, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=42.72 E-value=17 Score=21.50 Aligned_cols=20 Identities=15% Similarity=0.710 Sum_probs=16.1
Q ss_pred CCCCCCCCeeEEeec-cceec
Q 033136 79 PIGPKRGAKVKILRR-ESYWY 98 (126)
Q Consensus 79 pigp~RGskVrIlR~-ESYWy 98 (126)
.+..++|+.|.|+.+ +.-|+
T Consensus 23 eLs~~~Gd~i~v~~~~~~gW~ 43 (70)
T 2ct3_A 23 ELELREGDRVDVMQQCDDGWF 43 (70)
T ss_dssp BCCBCTTEEEEEEEECSSSCE
T ss_pred CccCCCCCEEEEEEECCCCEE
Confidence 577899999999987 55555
No 71
>2ysq_A RHO guanine nucleotide exchange factor 9; SH3 domain, CDC42 guanine nucleotide exchange factor (GEF) 9, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=42.30 E-value=23 Score=21.73 Aligned_cols=21 Identities=24% Similarity=0.503 Sum_probs=16.9
Q ss_pred CCCCCCCCeeEEeec-cceecc
Q 033136 79 PIGPKRGAKVKILRR-ESYWYN 99 (126)
Q Consensus 79 pigp~RGskVrIlR~-ESYWyn 99 (126)
....++|+.|.|+.+ +.-|+.
T Consensus 26 eLs~~~Gd~i~v~~~~~~~Ww~ 47 (81)
T 2ysq_A 26 ELAFKAGDVIKVLDASNKDWWW 47 (81)
T ss_dssp SCCCCTTCEEEEEECCSSSEEE
T ss_pred cCCCCCCCEEEEEEEcCcCEEE
Confidence 577899999999997 566654
No 72
>2dnu_A RUH-061, SH3 multiple domains 1; RSGI, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=41.93 E-value=19 Score=21.41 Aligned_cols=21 Identities=29% Similarity=0.729 Sum_probs=16.5
Q ss_pred CCCCCCCCCeeEEeec-cceec
Q 033136 78 PPIGPKRGAKVKILRR-ESYWY 98 (126)
Q Consensus 78 ppigp~RGskVrIlR~-ESYWy 98 (126)
.....++|+.|.|+.+ +.-|+
T Consensus 23 ~eLs~~~Gd~i~v~~~~~~~Ww 44 (71)
T 2dnu_A 23 DEIGFEKGVTVEVIRKNLEGWW 44 (71)
T ss_dssp TBCCBCTTCEEEECCCCSSSEE
T ss_pred CCCcCCCCCEEEEeECCCCCeE
Confidence 3577899999999987 55555
No 73
>2o9s_A Ponsin; SH3 domain, signaling protein; 0.83A {Homo sapiens} PDB: 2o31_A 2o9v_A 2o2w_A
Probab=41.91 E-value=24 Score=20.77 Aligned_cols=21 Identities=24% Similarity=0.813 Sum_probs=16.4
Q ss_pred CCCCCCCCCeeEEeec-cceec
Q 033136 78 PPIGPKRGAKVKILRR-ESYWY 98 (126)
Q Consensus 78 ppigp~RGskVrIlR~-ESYWy 98 (126)
.....++|+.|.|+++ ++-|+
T Consensus 21 ~eLs~~~Gd~i~v~~~~~~~Ww 42 (67)
T 2o9s_A 21 VEMSFRKGERITLLRQVDENWY 42 (67)
T ss_dssp TBCCBCTTCEEEEEEECSSSEE
T ss_pred CccCCCCCCEEEEEEecCCCEE
Confidence 3577899999999987 45555
No 74
>1oot_A Hypothetical 40.4 kDa protein in PES4-His2 intergenic region; SH3 domain, sturctural genomics, structural genomics; 1.39A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 1ssh_A 2a08_A
Probab=41.82 E-value=25 Score=20.12 Aligned_cols=22 Identities=18% Similarity=0.611 Sum_probs=16.7
Q ss_pred CCCCCCCCCeeEEeec---cceecc
Q 033136 78 PPIGPKRGAKVKILRR---ESYWYN 99 (126)
Q Consensus 78 ppigp~RGskVrIlR~---ESYWyn 99 (126)
.....++|+.|.|+.+ ++-|+.
T Consensus 18 ~eLs~~~Gd~i~v~~~~~~~~~Ww~ 42 (60)
T 1oot_A 18 GDLPFRKGDVITILKKSDSQNDWWT 42 (60)
T ss_dssp TBCCBCTTCEEEEEECCSCTTSEEE
T ss_pred CEeeEcCCCEEEEEEeCCCCCCeEE
Confidence 3577899999999987 355553
No 75
>2ecz_A Sorbin and SH3 domain-containing protein 1; glycoprotein, membrane, nuclear protein, phosphorylation, polymorphism, transport, structural genomics; NMR {Homo sapiens}
Probab=41.57 E-value=18 Score=21.46 Aligned_cols=20 Identities=25% Similarity=0.883 Sum_probs=16.1
Q ss_pred CCCCCCCCeeEEeec-cceec
Q 033136 79 PIGPKRGAKVKILRR-ESYWY 98 (126)
Q Consensus 79 pigp~RGskVrIlR~-ESYWy 98 (126)
....++|+.|.|+++ +.-|+
T Consensus 23 eLs~~~Gd~i~v~~~~~~~Ww 43 (70)
T 2ecz_A 23 EMSFRKGERITLLRQVDENWY 43 (70)
T ss_dssp BCCCCTTCBCEEEEEEETTEE
T ss_pred CcCCCCCCEEEEEEecCCCeE
Confidence 577899999999997 45555
No 76
>3j21_U 50S ribosomal protein L24P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=41.41 E-value=22 Score=25.58 Aligned_cols=30 Identities=37% Similarity=0.492 Sum_probs=23.7
Q ss_pred CCCCCCCeeEEeeccceeccccceEEEEccCC
Q 033136 80 IGPKRGAKVKILRRESYWYNGIGSVVAVDQVR 111 (126)
Q Consensus 80 igp~RGskVrIlR~ESYWyn~vGtVvsVDq~~ 111 (126)
.-+++||.|.|++-.. -...|+|..||...
T Consensus 44 ~~IkkGD~V~Vi~Gkd--KGk~GkV~~V~~k~ 73 (121)
T 3j21_U 44 LPVRVGDKVRIMRGDY--KGHEGKVVEVDLKR 73 (121)
T ss_dssp EECCSSSEEEECSSSC--SSEEEEEEEEETTT
T ss_pred cccccCCEEEEeecCC--CCcEeEEEEEEecC
Confidence 3478999999998752 45679999999763
No 77
>2ega_A SH3 and PX domain-containing protein 2A; SH3 domain, KIAA0418 protein, SH3MD1, SH3 multiple domains 1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=41.30 E-value=23 Score=21.00 Aligned_cols=22 Identities=23% Similarity=0.554 Sum_probs=17.1
Q ss_pred CCCCCCCCCeeEEeec-cceecc
Q 033136 78 PPIGPKRGAKVKILRR-ESYWYN 99 (126)
Q Consensus 78 ppigp~RGskVrIlR~-ESYWyn 99 (126)
..+..++|+.|.|+.+ +.-|+.
T Consensus 23 ~eLs~~~Gd~i~v~~~~~~~Ww~ 45 (70)
T 2ega_A 23 SELSLQAGEVVDVIEKNESGWWF 45 (70)
T ss_dssp SSCCCCTTCBCEEEEECTTSEEE
T ss_pred CcccCCCCCEEEEEEccCCCeEE
Confidence 3678899999999987 555553
No 78
>1wx6_A Cytoplasmic protein NCK2; SH3 domain, structural genomics, signal transduction, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens}
Probab=41.20 E-value=21 Score=22.34 Aligned_cols=21 Identities=10% Similarity=0.648 Sum_probs=16.7
Q ss_pred CCCCCCCCeeEEeec---cceecc
Q 033136 79 PIGPKRGAKVKILRR---ESYWYN 99 (126)
Q Consensus 79 pigp~RGskVrIlR~---ESYWyn 99 (126)
....++|+.|.|+.+ +.-|+.
T Consensus 33 eLs~~~Gd~i~v~~~~~~~~~Ww~ 56 (91)
T 1wx6_A 33 ELNFEKGETMEVIEKPENDPEWWK 56 (91)
T ss_dssp BCCCCTTCEEEEEECCSSCTTEEE
T ss_pred cccCCCCCEEEEEECCCCCCCcEE
Confidence 577899999999998 455553
No 79
>2ct4_A CDC42-interacting protein 4; thyroid receptor interacting protein 10, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=40.86 E-value=28 Score=20.61 Aligned_cols=17 Identities=12% Similarity=0.366 Sum_probs=14.6
Q ss_pred CCCCCCCCCeeEEeecc
Q 033136 78 PPIGPKRGAKVKILRRE 94 (126)
Q Consensus 78 ppigp~RGskVrIlR~E 94 (126)
.....++|+.|.||.++
T Consensus 22 ~eLs~~~Gd~i~vl~~~ 38 (70)
T 2ct4_A 22 GTISMAEGEDLSLMEED 38 (70)
T ss_dssp TCCCBCTTCEEEEEECC
T ss_pred CcCCCCCCCEEEEEecc
Confidence 46788999999999975
No 80
>2dl4_A Protein STAC; SH3 domain, STAC protein, SRC homology 3, cysteine-rich domain protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=40.83 E-value=26 Score=20.78 Aligned_cols=21 Identities=14% Similarity=0.515 Sum_probs=16.8
Q ss_pred CCCCCCCCeeEEeec-cceecc
Q 033136 79 PIGPKRGAKVKILRR-ESYWYN 99 (126)
Q Consensus 79 pigp~RGskVrIlR~-ESYWyn 99 (126)
....++|+.|.|+.+ ++-|+.
T Consensus 23 eLs~~~Gd~i~v~~~~~~~Ww~ 44 (68)
T 2dl4_A 23 DLEMRPGDIITLLEDSNEDWWK 44 (68)
T ss_dssp BCCCCTTCEEEEEECCCSSEEE
T ss_pred CcCCCCCCEEEEEEeCCCCEEE
Confidence 577899999999997 566664
No 81
>4dne_A Streptavidin; biotin, biotin-binding protein; HET: DTB; 1.88A {Streptomyces avidinii}
Probab=40.57 E-value=10 Score=29.15 Aligned_cols=18 Identities=33% Similarity=0.619 Sum_probs=14.4
Q ss_pred cceeccccceEEEEccCC
Q 033136 94 ESYWYNGIGSVVAVDQVR 111 (126)
Q Consensus 94 ESYWyn~vGtVvsVDq~~ 111 (126)
+-.||||.|+...|+.++
T Consensus 42 ~GtW~NelGS~mtI~~~~ 59 (183)
T 4dne_A 42 TGTWYNQLGSTFIVTAGA 59 (183)
T ss_dssp CEEEEETTSCEEEEEECT
T ss_pred cEEEEcCCCCEEEEEECC
Confidence 457999999998887653
No 82
>2bc3_A Streptavidin; T7 TAG, biotin binding protein; 1.54A {Streptomyces avidinii} SCOP: b.61.1.1 PDB: 2wpu_A* 3pk2_A* 2qcb_A* 1stp_A*
Probab=40.55 E-value=12 Score=28.33 Aligned_cols=17 Identities=35% Similarity=0.667 Sum_probs=14.1
Q ss_pred cceeccccceEEEEccC
Q 033136 94 ESYWYNGIGSVVAVDQV 110 (126)
Q Consensus 94 ESYWyn~vGtVvsVDq~ 110 (126)
...|||+.|+...|..+
T Consensus 18 ~GtW~NqlGS~MtI~~~ 34 (159)
T 2bc3_A 18 TGTWYNQLGSTFIVTAG 34 (159)
T ss_dssp SEEEECTTCCEEEEEEC
T ss_pred ceEEEcCCCCEEEEEEC
Confidence 56899999999888653
No 83
>4hcz_A PHD finger protein 1; protein-peptide complex, tudor, histone binding, H3K36ME3, N nucleus, transcription; HET: M3L; 1.85A {Homo sapiens}
Probab=40.48 E-value=20 Score=23.52 Aligned_cols=38 Identities=24% Similarity=0.382 Sum_probs=25.2
Q ss_pred CCCCCCeeEEeeccceeccccceEEEEccCCceeeeeEEEEeee
Q 033136 81 GPKRGAKVKILRRESYWYNGIGSVVAVDQVRLFSIFLVYVTFNH 124 (126)
Q Consensus 81 gp~RGskVrIlR~ESYWyn~vGtVvsVDq~~~~~rYPVvVRF~k 124 (126)
+...|+.|-+.=..--.| .|||+.||+++. +| +|||++
T Consensus 3 ~f~~GedVLarwsDG~fY--lGtI~~V~~~~~--~c--lV~F~D 40 (58)
T 4hcz_A 3 RLWEGQDVLARWTDGLLY--LGTIKKVDSARE--VC--LVQFED 40 (58)
T ss_dssp SCCTTCEEEEECTTSCEE--EEEEEEEETTTT--EE--EEEETT
T ss_pred ccccCCEEEEEecCCCEE--eEEEEEEecCCC--EE--EEEEcC
Confidence 345677776643333333 699999999975 44 778864
No 84
>2dl5_A KIAA0769 protein; SH3 domain, FCHSD2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=40.35 E-value=21 Score=21.88 Aligned_cols=21 Identities=5% Similarity=0.265 Sum_probs=17.0
Q ss_pred CCCCCCCCeeEEeecc--ceecc
Q 033136 79 PIGPKRGAKVKILRRE--SYWYN 99 (126)
Q Consensus 79 pigp~RGskVrIlR~E--SYWyn 99 (126)
....++|+.|.|+.++ .-|+.
T Consensus 29 eLs~~~Gd~i~v~~~~~~~~Ww~ 51 (78)
T 2dl5_A 29 ELTIEEHEVLEVIEDGDMEDWVK 51 (78)
T ss_dssp BCCBCSSEEEEEEECCSSSSEEE
T ss_pred CCCCCCCCEEEEEeccCCCCcEE
Confidence 5778999999999984 56653
No 85
>2jxb_A T-cell surface glycoprotein CD3 epsilon chain, cytoplasmic protein NCK2; T-cell receptor, SH3 domain, immunology, SH2 domain; NMR {Homo sapiens}
Probab=40.35 E-value=16 Score=23.03 Aligned_cols=22 Identities=14% Similarity=0.410 Sum_probs=18.5
Q ss_pred CCCCCCCCeeEEeeccceeccc
Q 033136 79 PIGPKRGAKVKILRRESYWYNG 100 (126)
Q Consensus 79 pigp~RGskVrIlR~ESYWyn~ 100 (126)
....++|+.|.|+.+++-|+..
T Consensus 47 eLs~~~Gd~i~v~~~~~~Ww~g 68 (86)
T 2jxb_A 47 ELDIKKNERLWLLDDSKTWWRV 68 (86)
T ss_dssp BCCCCTTEEEEEEECCSSEEEE
T ss_pred EeccCCCCEEEEEecCCCeEEE
Confidence 5678999999999998888753
No 86
>2zkr_t 60S ribosomal protein L26; protein-RNA complex, 60S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=40.22 E-value=24 Score=26.20 Aligned_cols=30 Identities=20% Similarity=0.318 Sum_probs=23.7
Q ss_pred CCCCCCCeeEEeeccceecccc-ceEEEEccCC
Q 033136 80 IGPKRGAKVKILRRESYWYNGI-GSVVAVDQVR 111 (126)
Q Consensus 80 igp~RGskVrIlR~ESYWyn~v-GtVvsVDq~~ 111 (126)
.-+++||.|.|++-.. -... |+|..||...
T Consensus 47 ~~IkkGD~V~Vi~Gkd--KGk~~GkV~~V~~k~ 77 (145)
T 2zkr_t 47 MPIRKDDEVQVVRGHY--KGQQIGKVVQVYRKK 77 (145)
T ss_dssp CBCCTTCEEEECSSTT--TTCCSEEEEEEETTT
T ss_pred cccCCCCEEEEeecCC--CCcceeEEEEEECCC
Confidence 4589999999999652 2456 9999999764
No 87
>2bz8_A SH3-domain kinase binding protein 1; SH3 domain, CIN85 adaptor protein, CBL ubiquitin ligase; 2.0A {Homo sapiens}
Probab=40.15 E-value=27 Score=19.96 Aligned_cols=22 Identities=14% Similarity=0.447 Sum_probs=16.9
Q ss_pred CCCCCCCCCeeEEeec-cceecc
Q 033136 78 PPIGPKRGAKVKILRR-ESYWYN 99 (126)
Q Consensus 78 ppigp~RGskVrIlR~-ESYWyn 99 (126)
.....++|+.|.|+.+ ++-|+.
T Consensus 16 ~eLs~~~Gd~i~v~~~~~~~Ww~ 38 (58)
T 2bz8_A 16 DELTISVGEIITNIRKEDGGWWE 38 (58)
T ss_dssp TBCCBCTTCEEEEEECCTTTEEE
T ss_pred CEeeECCCCEEEEEEeCCCCEEE
Confidence 3577899999999997 455653
No 88
>2gnc_A SLIT-ROBO RHO GTPase-activating protein 1; beta barrel, signaling protein; 1.80A {Mus musculus}
Probab=40.11 E-value=22 Score=20.54 Aligned_cols=20 Identities=25% Similarity=0.627 Sum_probs=15.9
Q ss_pred CCCCCCCCeeEEeec-cceec
Q 033136 79 PIGPKRGAKVKILRR-ESYWY 98 (126)
Q Consensus 79 pigp~RGskVrIlR~-ESYWy 98 (126)
....++|+.|.|+.+ ++-|+
T Consensus 22 eLs~~~Gd~i~v~~~~~~~Ww 42 (60)
T 2gnc_A 22 ELSFKKGASLLLYHRASEDWW 42 (60)
T ss_dssp BCCBCTTCEEEEEEEEETTEE
T ss_pred CcCCCCCCEEEEEEecCCCEE
Confidence 577899999999997 44554
No 89
>3bbo_W Ribosomal protein L24; large ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea}
Probab=39.56 E-value=8 Score=30.23 Aligned_cols=27 Identities=22% Similarity=0.362 Sum_probs=22.6
Q ss_pred CCCCCeeEEeeccceeccccceEEEEccC
Q 033136 82 PKRGAKVKILRRESYWYNGIGSVVAVDQV 110 (126)
Q Consensus 82 p~RGskVrIlR~ESYWyn~vGtVvsVDq~ 110 (126)
+++||+|.|++-.. -...|+|..|+..
T Consensus 69 IkKGD~V~VIaGkD--KGK~GkVl~V~~k 95 (191)
T 3bbo_W 69 VKVGDTVKVISGGE--KGKIGEISKIHKH 95 (191)
T ss_dssp SCCSSCEEECSSSS--TTCCCSCCCCCSS
T ss_pred eecCCEEEEeecCC--CCceEEEEEEECC
Confidence 88999999999763 3678999999865
No 90
>3h0g_E DNA-directed RNA polymerases I, II, and III subunit rpabc1; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=39.02 E-value=13 Score=29.01 Aligned_cols=15 Identities=60% Similarity=0.931 Sum_probs=13.6
Q ss_pred CCCCCCCeeEEeecc
Q 033136 80 IGPKRGAKVKILRRE 94 (126)
Q Consensus 80 igp~RGskVrIlR~E 94 (126)
.|.++|+.|||.|+-
T Consensus 183 ~g~k~GdVvkI~R~s 197 (210)
T 3h0g_E 183 LGLKRGEVVKIVRRS 197 (210)
T ss_dssp HTCCTTCEEEEECCC
T ss_pred hCCCCCCEEEEEeCC
Confidence 599999999999983
No 91
>1uti_A GRB2-related adaptor protein 2; signaling protein regulator, SH3 domain/complex, adaptor protein (MONA); 1.5A {Mus musculus} SCOP: b.34.2.1 PDB: 1h3h_A 1oeb_A 2w10_A 2d0n_A
Probab=38.89 E-value=31 Score=19.63 Aligned_cols=21 Identities=24% Similarity=0.646 Sum_probs=16.4
Q ss_pred CCCCCCCCCeeEEeec-cceec
Q 033136 78 PPIGPKRGAKVKILRR-ESYWY 98 (126)
Q Consensus 78 ppigp~RGskVrIlR~-ESYWy 98 (126)
.....++|+.|.|+.+ ++-|+
T Consensus 16 ~eLs~~~Gd~i~v~~~~~~~Ww 37 (58)
T 1uti_A 16 DELGFRSGEVVEVLDSSNPSWW 37 (58)
T ss_dssp TBCCBCTTCEEEEEECCSSSEE
T ss_pred CCCCCCCCCEEEEEEECCCCEE
Confidence 3577899999999987 45555
No 92
>1spk_A RSGI RUH-010, riken cDNA 1300006M19; structural genomics, SH3 domain, five-stranded barrel, mouse cDNA; NMR {Mus musculus} SCOP: b.34.2.1
Probab=38.34 E-value=18 Score=21.64 Aligned_cols=21 Identities=14% Similarity=0.298 Sum_probs=16.6
Q ss_pred CCCCCCCCeeEEeec--cceecc
Q 033136 79 PIGPKRGAKVKILRR--ESYWYN 99 (126)
Q Consensus 79 pigp~RGskVrIlR~--ESYWyn 99 (126)
....++|+.|.|+++ +.-|+.
T Consensus 24 eLs~~~Gd~i~v~~~~~~~gWw~ 46 (72)
T 1spk_A 24 LLSFAQGDVLTLLIPEEKDGWLY 46 (72)
T ss_dssp BCCBCTTCEEEECCSSCBTTEEE
T ss_pred CCcCCCCCEEEEeEccCCCCcEE
Confidence 577899999999975 566664
No 93
>1dzf_A DNA-directed RNA polymerases I, II, and III 27 KD polypeptide; RNA polymerase subunit; 1.9A {Saccharomyces cerevisiae} SCOP: c.52.3.1 d.78.1.1 PDB: 1i3q_E 1i50_E 1i6h_E 1k83_E* 1nik_E 1nt9_E 1pqv_E 1r5u_E 1r9s_E* 1r9t_E* 1sfo_E* 1twa_E* 1twc_E* 1twf_E* 1twg_E* 1twh_E* 1wcm_E 1y1v_E 1y1w_E 1y1y_E ...
Probab=38.26 E-value=14 Score=29.06 Aligned_cols=16 Identities=50% Similarity=0.787 Sum_probs=14.0
Q ss_pred CCCCCCCCeeEEeecc
Q 033136 79 PIGPKRGAKVKILRRE 94 (126)
Q Consensus 79 pigp~RGskVrIlR~E 94 (126)
-+|.++|+.|||.|+-
T Consensus 187 ~~g~k~G~vvkI~R~s 202 (215)
T 1dzf_A 187 YLGLKRGEVVKIIRKS 202 (215)
T ss_dssp HHTCCTTCEEEEECTT
T ss_pred HhCCcCCCEEEEEECC
Confidence 3599999999999983
No 94
>1wyx_A CRK-associated substrate; beta sheets, cell adhesion; 1.14A {Homo sapiens}
Probab=38.04 E-value=26 Score=20.70 Aligned_cols=21 Identities=14% Similarity=0.536 Sum_probs=17.0
Q ss_pred CCCCCCCCeeEEeecc----ceecc
Q 033136 79 PIGPKRGAKVKILRRE----SYWYN 99 (126)
Q Consensus 79 pigp~RGskVrIlR~E----SYWyn 99 (126)
....++|+.|.|++++ .-|+.
T Consensus 19 eLs~~~Gd~i~v~~~~~~~~~~Ww~ 43 (69)
T 1wyx_A 19 ELSFRKGDIMTVLEQDTQGLDGWWL 43 (69)
T ss_dssp BCCBCTTCEEEEEETTGGGCTTEEE
T ss_pred ccCCcCCCEEEEeECCCCCCCCcEE
Confidence 5778999999999984 56664
No 95
>3reb_B Tyrosine-protein kinase HCK; HIV-1 NEF, SH3 domain binding, signaling, HCK SH3 domain, PR binding; 3.45A {Homo sapiens}
Probab=38.00 E-value=26 Score=21.83 Aligned_cols=22 Identities=14% Similarity=0.546 Sum_probs=18.5
Q ss_pred CCCCCCCCeeEEeeccceeccc
Q 033136 79 PIGPKRGAKVKILRRESYWYNG 100 (126)
Q Consensus 79 pigp~RGskVrIlR~ESYWyn~ 100 (126)
....++|+.|.|+.++.-|+..
T Consensus 19 eLs~~~Gd~i~v~~~~~~Ww~g 40 (90)
T 3reb_B 19 DLSFQKGDQMVVLEESGEWWKA 40 (90)
T ss_dssp BCCBCTTCEEEEEECSSSEEEE
T ss_pred cCCCCCCCEEEEEEeCCCEEEE
Confidence 5788999999999998777753
No 96
>2ak5_A RHO guanine nucleotide exchange factor 7; adaptor proteins, CIN85, PIX/COOL, protein-protein interaction, X-RAY, endocytosis; 1.85A {Rattus norvegicus} PDB: 1zsg_A
Probab=37.94 E-value=29 Score=20.12 Aligned_cols=22 Identities=18% Similarity=0.501 Sum_probs=16.8
Q ss_pred CCCCCCCCCeeEEeec-cceecc
Q 033136 78 PPIGPKRGAKVKILRR-ESYWYN 99 (126)
Q Consensus 78 ppigp~RGskVrIlR~-ESYWyn 99 (126)
.....++|+.|.|+++ ++-|+.
T Consensus 21 ~eLs~~~Gd~i~v~~~~~~~Ww~ 43 (64)
T 2ak5_A 21 DELSFSKGDVIHVTRVEEGGWWE 43 (64)
T ss_dssp TBCCBCTTCEEEEEECCTTSEEE
T ss_pred CcccCCCCCEEEEeEecCCCEEE
Confidence 3577899999999986 455653
No 97
>3rdo_A Streptavidin; improved desthiobiotin binding, opene destabilization, biotin binding protein; HET: BTN; 1.40A {Streptomyces avidinii} PDB: 3rdm_A* 3rdq_A* 3rds_A* 3rdu_A* 3rdx_A 3re6_A 3re5_A
Probab=37.94 E-value=10 Score=28.62 Aligned_cols=28 Identities=36% Similarity=0.640 Sum_probs=15.4
Q ss_pred CCCCeeEEeeccc----eeccccceEEEEccC
Q 033136 83 KRGAKVKILRRES----YWYNGIGSVVAVDQV 110 (126)
Q Consensus 83 ~RGskVrIlR~ES----YWyn~vGtVvsVDq~ 110 (126)
.||+.+|-.|-+. -||||.|++..|.++
T Consensus 16 ~~~~~~~~~~a~c~l~GtW~NqlGS~m~I~~~ 47 (153)
T 3rdo_A 16 GRGRLIKHMTAEAGITGTWYNQLGSTLIVTAG 47 (153)
T ss_dssp ---------CHHHHHSEEEEETTSCEEEEEEC
T ss_pred ccceEEEEehhccCccEEEEcCCCCEEEEEEC
Confidence 3788887777654 899999999988653
No 98
>2drm_A Acanthamoeba myosin IB; SH3 domain, contractIle protein; 1.35A {Acanthamoeba} PDB: 2drk_A
Probab=37.88 E-value=30 Score=19.58 Aligned_cols=21 Identities=14% Similarity=0.521 Sum_probs=16.4
Q ss_pred CCCCCCCCeeEEeecc-ceecc
Q 033136 79 PIGPKRGAKVKILRRE-SYWYN 99 (126)
Q Consensus 79 pigp~RGskVrIlR~E-SYWyn 99 (126)
....++|+.|.|+.+. +-|+.
T Consensus 19 eLs~~~Gd~i~v~~~~~~~W~~ 40 (58)
T 2drm_A 19 ELTFKEGDTIIVHQKDPAGWWE 40 (58)
T ss_dssp BCCBCTTCEEEEEECCTTSEEE
T ss_pred CcCCCCCCEEEEEEecCCCEEE
Confidence 5778999999999873 55553
No 99
>1x43_A Endophilin B1, SH3 domain GRB2-like protein B1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=37.75 E-value=25 Score=21.61 Aligned_cols=21 Identities=10% Similarity=0.260 Sum_probs=16.8
Q ss_pred CCCCCCCCeeEEeec---cceecc
Q 033136 79 PIGPKRGAKVKILRR---ESYWYN 99 (126)
Q Consensus 79 pigp~RGskVrIlR~---ESYWyn 99 (126)
....++|+.|.|+.+ +.-|+.
T Consensus 33 eLs~~~Gd~i~v~~~~~~~~~Ww~ 56 (81)
T 1x43_A 33 ELSLLADEVITVFSVVGMDSDWLM 56 (81)
T ss_dssp BCCCCTTCEEEEECCTTCCTTEEE
T ss_pred cCCCCCCCEEEEEEcCCCCCCcEE
Confidence 577899999999998 456654
No 100
>3thk_A Spectrin alpha chain, brain; SH3 domain, chimera, structural protein; 1.70A {Rattus norvegicus} SCOP: b.34.2.1
Probab=37.58 E-value=29 Score=20.55 Aligned_cols=21 Identities=19% Similarity=0.561 Sum_probs=17.0
Q ss_pred CCCCCCCCeeEEeec-cceecc
Q 033136 79 PIGPKRGAKVKILRR-ESYWYN 99 (126)
Q Consensus 79 pigp~RGskVrIlR~-ESYWyn 99 (126)
....++|+.|.|+.+ ++-|+.
T Consensus 21 eLs~~~Gd~i~v~~~~~~~Ww~ 42 (73)
T 3thk_A 21 EVTMKKGDILTLLNSTNKDWWK 42 (73)
T ss_dssp BCCBCTTCEEEEEECCSSSEEE
T ss_pred ccCCCCCCEEEEEECCCCCeEE
Confidence 578899999999998 556664
No 101
>2dbm_A SH3-containing GRB2-like protein 2; EC 2.3.1.-, SH3 domain protein 2A, endophilin 1, EEN-B1, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2knb_B 3iql_A
Probab=37.50 E-value=24 Score=21.16 Aligned_cols=21 Identities=24% Similarity=0.695 Sum_probs=16.9
Q ss_pred CCCCCCCCeeEEeec-cceecc
Q 033136 79 PIGPKRGAKVKILRR-ESYWYN 99 (126)
Q Consensus 79 pigp~RGskVrIlR~-ESYWyn 99 (126)
....++|+.|.|+++ +.-|+.
T Consensus 23 eLs~~~Gd~i~v~~~~~~~Ww~ 44 (73)
T 2dbm_A 23 ELGFKEGDIITLTNQIDENWYE 44 (73)
T ss_dssp CCCBCTTCEEECCBCSSSSEEE
T ss_pred CccCCCCCEEEEEEecCCCEEE
Confidence 577899999999987 556664
No 102
>1cka_A C-CRK N-terminal SH3 domain; complex (oncogene protein/peptide); 1.50A {Mus musculus} SCOP: b.34.2.1 PDB: 1ckb_A 1m3c_A 1m30_A 1m3b_A 1m3a_A
Probab=37.41 E-value=33 Score=19.44 Aligned_cols=21 Identities=24% Similarity=0.566 Sum_probs=16.3
Q ss_pred CCCCCCCCeeEEeecc-ceecc
Q 033136 79 PIGPKRGAKVKILRRE-SYWYN 99 (126)
Q Consensus 79 pigp~RGskVrIlR~E-SYWyn 99 (126)
....++|+.|.|+.++ +-|+.
T Consensus 17 eLs~~~Gd~i~v~~~~~~~Ww~ 38 (57)
T 1cka_A 17 DLPFKKGDILRIRDKPEEQWWN 38 (57)
T ss_dssp BCCBCTTCEEEEEECSSSSEEE
T ss_pred CCCCCCCCEEEEEEecCCCcEE
Confidence 5778999999999873 55553
No 103
>2cub_A Cytoplasmic protein NCK1; SH3 domain, NCK1 adaptor, tyrosine kinase, signal transduction, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=36.52 E-value=26 Score=22.03 Aligned_cols=21 Identities=19% Similarity=0.588 Sum_probs=17.0
Q ss_pred CCCCCCCCeeEEeec-cceecc
Q 033136 79 PIGPKRGAKVKILRR-ESYWYN 99 (126)
Q Consensus 79 pigp~RGskVrIlR~-ESYWyn 99 (126)
....++|+.|.||.+ +.-|+.
T Consensus 33 eLs~~~Gd~i~v~~~~~~gWw~ 54 (88)
T 2cub_A 33 ELSLIKGTKVIVMEKCSDGWWR 54 (88)
T ss_dssp BCCCCTTEEEEEEEECTTSEEE
T ss_pred CcCCCCCCEEEEEEccCCCeEE
Confidence 577899999999998 566663
No 104
>2g6f_X RHO guanine nucleotide exchange factor 7; SH3 domain, peptide interaction, signaling protein; HET: NCO; 0.92A {Rattus norvegicus} PDB: 2df6_A* 2p4r_A 2esw_A
Probab=36.09 E-value=34 Score=19.57 Aligned_cols=22 Identities=18% Similarity=0.501 Sum_probs=16.8
Q ss_pred CCCCCCCCCeeEEeec-cceecc
Q 033136 78 PPIGPKRGAKVKILRR-ESYWYN 99 (126)
Q Consensus 78 ppigp~RGskVrIlR~-ESYWyn 99 (126)
.....++|+.|.|+++ ++-|+.
T Consensus 19 ~eLs~~~Gd~i~v~~~~~~~Ww~ 41 (59)
T 2g6f_X 19 DELSFSKGDVIHVTRVEEGGWWE 41 (59)
T ss_dssp TBCCBCTTCEEEEEEECTTSEEE
T ss_pred CCcCCCCCCEEEEEEecCCCEEE
Confidence 3577899999999986 455654
No 105
>1tuc_A Alpha-spectrin; capping protein, calcium-binding, duplication, repeat, SH3 domain, cytoskeleton; 2.02A {Gallus gallus} SCOP: b.34.2.1
Probab=36.05 E-value=31 Score=20.33 Aligned_cols=21 Identities=19% Similarity=0.561 Sum_probs=16.1
Q ss_pred CCCCCCCCeeEEeec-cceecc
Q 033136 79 PIGPKRGAKVKILRR-ESYWYN 99 (126)
Q Consensus 79 pigp~RGskVrIlR~-ESYWyn 99 (126)
....++|+.|.|+.+ ++-|+.
T Consensus 5 eLs~~~Gd~i~v~~~~~~~Ww~ 26 (63)
T 1tuc_A 5 EVTMKKGDILTLLNSTNKDWWK 26 (63)
T ss_dssp CCCBCTTCEEEEEECCSSSEEE
T ss_pred ccCCCCCCEEEEEEecCCCEEE
Confidence 466799999999987 455654
No 106
>2zjr_R 50S ribosomal protein L24; ribosome, large ribosomal subunit, ribonucleoprotein, RNA-binding, rRNA-binding, tRNA-binding, methylation; 2.91A {Deinococcus radiodurans} SCOP: b.34.5.1 PDB: 1nwx_S* 1nwy_S* 1sm1_S* 1xbp_S* 2d3o_S 2zjp_R* 2zjq_R 1nkw_S 3cf5_R* 3dll_R* 3pio_R* 3pip_R* 1pnu_S 1pny_S 1vor_V 1vou_V 1vow_V 1voy_V 1vp0_V
Probab=35.76 E-value=47 Score=23.46 Aligned_cols=30 Identities=20% Similarity=0.214 Sum_probs=24.7
Q ss_pred CCCCCCCeeEEeeccceeccccceEEEEccCC
Q 033136 80 IGPKRGAKVKILRRESYWYNGIGSVVAVDQVR 111 (126)
Q Consensus 80 igp~RGskVrIlR~ESYWyn~vGtVvsVDq~~ 111 (126)
.-+++||.|.|++-.. -...|+|..||...
T Consensus 14 m~IkkGD~V~Vi~Gkd--KGk~GkV~~V~~~~ 43 (115)
T 2zjr_R 14 LHFKKGDTVIVLSGKH--KGQTGKVLLALPRD 43 (115)
T ss_dssp CSSCTTSEEECCSSSS--TTCEEEEEEEETTT
T ss_pred CcccCCCEEEEeEcCC--CCcEEEEEEEECCC
Confidence 4689999999999753 46789999999764
No 107
>1uj0_A Signal transducing adaptor molecule (SH3 domain and ITAM motif) 2; STAM, SH3, GRB2, GADS, PXXP, HRS, endocytosis, early endosome, signaling protein/signaling protein complex; 1.70A {Mus musculus} SCOP: b.34.2.1
Probab=35.68 E-value=33 Score=19.88 Aligned_cols=21 Identities=19% Similarity=0.585 Sum_probs=16.0
Q ss_pred CCCCCCCCeeEEeec-cceecc
Q 033136 79 PIGPKRGAKVKILRR-ESYWYN 99 (126)
Q Consensus 79 pigp~RGskVrIlR~-ESYWyn 99 (126)
....++|+.|.|+.+ ++-|+.
T Consensus 21 eLs~~~Gd~i~v~~~~~~~Ww~ 42 (62)
T 1uj0_A 21 ELTFKHGELITVLDDSDANWWQ 42 (62)
T ss_dssp BCCBCTTCEEEEEECCSSSEEE
T ss_pred CcCCCCCCEEEEEEeCCCCEEE
Confidence 577899999999987 344543
No 108
>2dl7_A KIAA0769 protein; SH3 domain, FCHSD2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=35.61 E-value=32 Score=20.58 Aligned_cols=21 Identities=19% Similarity=0.480 Sum_probs=16.5
Q ss_pred CCCCCCCCeeEEeec----cceecc
Q 033136 79 PIGPKRGAKVKILRR----ESYWYN 99 (126)
Q Consensus 79 pigp~RGskVrIlR~----ESYWyn 99 (126)
....++|+.|.|+.+ +.-|+.
T Consensus 24 eLsf~~Gd~i~v~~~~~~~~~~Ww~ 48 (73)
T 2dl7_A 24 ELSFPEGAIIRILNKENQDDDGFWE 48 (73)
T ss_dssp BCCBCTTCEEEEEECCCSSSSSCEE
T ss_pred cCCCCCCCEEEEEECCCCCCCCcEE
Confidence 477899999999987 455654
No 109
>2rf0_A Mitogen-activated protein kinase kinase kinase 10; MAP3K10, MLK2, SH3 domain, TKL kinase, MKN28, structural GEN structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=35.37 E-value=30 Score=22.31 Aligned_cols=15 Identities=27% Similarity=0.636 Sum_probs=13.5
Q ss_pred CCCCCCCCeeEEeec
Q 033136 79 PIGPKRGAKVKILRR 93 (126)
Q Consensus 79 pigp~RGskVrIlR~ 93 (126)
....++|+.|.|+.+
T Consensus 45 ELsf~~GD~I~Vl~~ 59 (89)
T 2rf0_A 45 ELTLRRGDRVQVLSQ 59 (89)
T ss_dssp BCCBCTTCEEEEEEC
T ss_pred ccccCCCCEEEEEec
Confidence 577899999999997
No 110
>2nwm_A Vinexin; cell adhesion; NMR {Homo sapiens}
Probab=35.35 E-value=32 Score=20.59 Aligned_cols=21 Identities=19% Similarity=0.482 Sum_probs=16.7
Q ss_pred CCCCCCCCeeEEeec-cceecc
Q 033136 79 PIGPKRGAKVKILRR-ESYWYN 99 (126)
Q Consensus 79 pigp~RGskVrIlR~-ESYWyn 99 (126)
....++|+.|.|+.+ ++-|+.
T Consensus 17 eLs~~~Gd~i~v~~~~~~~Ww~ 38 (65)
T 2nwm_A 17 ELTLQKGDIVYIHKEVDKNWLE 38 (65)
T ss_dssp BCCBCTTCEEEEEECCTTTCEE
T ss_pred ccCCcCCCEEEEEEecCCCEEE
Confidence 577899999999987 456664
No 111
>1zlm_A Osteoclast stimulating factor 1; beta barrel, signaling protein; 1.07A {Homo sapiens}
Probab=35.27 E-value=37 Score=19.36 Aligned_cols=22 Identities=14% Similarity=0.353 Sum_probs=16.8
Q ss_pred CCCCCCCCCeeEEeec-cceecc
Q 033136 78 PPIGPKRGAKVKILRR-ESYWYN 99 (126)
Q Consensus 78 ppigp~RGskVrIlR~-ESYWyn 99 (126)
.....++|+.|.|+.+ ++-|+.
T Consensus 18 ~eLs~~~Gd~i~v~~~~~~~Ww~ 40 (58)
T 1zlm_A 18 DELYFEEGDIIYITDMSDTNWWK 40 (58)
T ss_dssp TBCCBCTTCEEEEEECCSSSEEE
T ss_pred CCccCCCCCEEEEEEeCCCCEEE
Confidence 3577899999999986 356654
No 112
>3c0c_A Endophilin-A2; endocytosis, SH3, voltage-gated calcium channel, endosome, L binding, membrane, phosphoprotein, proto-oncogene, SH3 DOMA; 1.70A {Rattus norvegicus}
Probab=35.19 E-value=32 Score=20.69 Aligned_cols=21 Identities=19% Similarity=0.688 Sum_probs=16.9
Q ss_pred CCCCCCCCeeEEeec-cceecc
Q 033136 79 PIGPKRGAKVKILRR-ESYWYN 99 (126)
Q Consensus 79 pigp~RGskVrIlR~-ESYWyn 99 (126)
....++|+.|.|+.+ ++-|+.
T Consensus 29 eLs~~~Gd~i~v~~~~~~~W~~ 50 (73)
T 3c0c_A 29 ELGFREGDLITLTNQIDENWYE 50 (73)
T ss_dssp BCCBCTTCEEEEEEECSSSEEE
T ss_pred CccCcCCCEEEEEEecCCCEEE
Confidence 578899999999987 556664
No 113
>1g2b_A Spectrin alpha chain; capping protein, calcium-binding, duplication, repeat, SH3 domain, cytoskeleton, metal binding protein; 1.12A {Gallus gallus} SCOP: b.34.2.1 PDB: 1tud_A
Probab=35.11 E-value=33 Score=19.95 Aligned_cols=20 Identities=20% Similarity=0.576 Sum_probs=15.4
Q ss_pred CCCCCCCCeeEEeec-cceec
Q 033136 79 PIGPKRGAKVKILRR-ESYWY 98 (126)
Q Consensus 79 pigp~RGskVrIlR~-ESYWy 98 (126)
....++|+.+.|+++ +.-|+
T Consensus 37 eLsf~~Gd~i~v~~~~~~~Ww 57 (62)
T 1g2b_A 37 EVTMKKGDILTLLNSTNKDWW 57 (62)
T ss_dssp BCCBCTTCEEEEEECCSSSEE
T ss_pred ccCCCCCCEEEEEEecCCCEE
Confidence 467899999999997 34444
No 114
>1ujy_A RHO guanine nucleotide exchange factor 6; structural genomics, SH3 domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=35.09 E-value=23 Score=21.38 Aligned_cols=21 Identities=19% Similarity=0.472 Sum_probs=16.7
Q ss_pred CCCCCCCCeeEEeec-cceecc
Q 033136 79 PIGPKRGAKVKILRR-ESYWYN 99 (126)
Q Consensus 79 pigp~RGskVrIlR~-ESYWyn 99 (126)
....++|+.|.|+.+ +.-|+.
T Consensus 26 eLs~~~Gd~i~v~~~~~~~Ww~ 47 (76)
T 1ujy_A 26 ELSVCKGDIIYVTRVEEGGWWE 47 (76)
T ss_dssp SCCBCSSCCEEESSCCSSSCEE
T ss_pred cccCCCCCEEEEEEecCCCEEE
Confidence 578899999999987 555653
No 115
>3u5e_Y L33, YL33, 60S ribosomal protein L26-A; translation, ribosome, ribosomal R ribosomal protein, STM1, eukaryotic ribosome; 3.00A {Saccharomyces cerevisiae} PDB: 2wwa_L 2ww9_L 2wwb_L 3o5h_X 3o58_X 3u5i_Y 4b6a_Y 1s1i_U 3izc_Y 3izs_Y 3jyw_U
Probab=35.08 E-value=31 Score=25.22 Aligned_cols=28 Identities=18% Similarity=0.231 Sum_probs=22.5
Q ss_pred CCCCCCeeEEeeccceeccccceEEEEccC
Q 033136 81 GPKRGAKVKILRRESYWYNGIGSVVAVDQV 110 (126)
Q Consensus 81 gp~RGskVrIlR~ESYWyn~vGtVvsVDq~ 110 (126)
-+++||+|.|++-. .=...|+|..|+..
T Consensus 49 ~IkkgD~V~Vi~Gk--dKGk~GkV~~V~~k 76 (127)
T 3u5e_Y 49 PIRRDDEVLVVRGS--KKGQEGKISSVYRL 76 (127)
T ss_dssp ECCTTCEEEECSST--TTTCEEEEEEEEGG
T ss_pred cccCCCEEEEeecC--CCCccceEEEEECC
Confidence 47899999999975 23457999999975
No 116
>2a28_A BZZ1 protein; SH3 domain, signaling protein; 1.07A {Saccharomyces cerevisiae}
Probab=35.05 E-value=39 Score=18.97 Aligned_cols=21 Identities=19% Similarity=0.457 Sum_probs=16.4
Q ss_pred CCCCCCCCCeeEEeeccc--eec
Q 033136 78 PPIGPKRGAKVKILRRES--YWY 98 (126)
Q Consensus 78 ppigp~RGskVrIlR~ES--YWy 98 (126)
.....++|+.|.|+++.. -|+
T Consensus 15 ~eLs~~~Gd~i~v~~~~~~~~W~ 37 (54)
T 2a28_A 15 DEISIDPGDIITVIRGDDGSGWT 37 (54)
T ss_dssp TBCCBCTTCEEEEEECCCSSSEE
T ss_pred CCccCCCCCEEEEEEecCCCCEE
Confidence 357789999999999863 454
No 117
>1s1n_A Nephrocystin 1; beta barrel, cell adhesion; NMR {Homo sapiens}
Probab=34.82 E-value=25 Score=20.68 Aligned_cols=22 Identities=14% Similarity=0.398 Sum_probs=16.8
Q ss_pred CCCCCCCCCeeEEeec-cceecc
Q 033136 78 PPIGPKRGAKVKILRR-ESYWYN 99 (126)
Q Consensus 78 ppigp~RGskVrIlR~-ESYWyn 99 (126)
.....++|+.|.|+.+ ++-|+.
T Consensus 25 ~eLs~~~Gd~i~v~~~~~~~Ww~ 47 (68)
T 1s1n_A 25 GDLTFKKGEILLVIEKKPDGWWI 47 (68)
T ss_dssp SCCCBCSSEEEEECSCCSSSEEE
T ss_pred CcCCCCCCCEEEEEEcCCCCeEE
Confidence 3677899999999987 345553
No 118
>1w70_A Neutrophil cytosol factor 4; NADPH oxidase, P40PHOX, P47PHOX, SH3 domain, polyproline; 1.46A {Homo sapiens} PDB: 1w6x_A
Probab=34.71 E-value=37 Score=19.55 Aligned_cols=21 Identities=24% Similarity=0.485 Sum_probs=16.4
Q ss_pred CCCCCCCCeeEEeec-cceecc
Q 033136 79 PIGPKRGAKVKILRR-ESYWYN 99 (126)
Q Consensus 79 pigp~RGskVrIlR~-ESYWyn 99 (126)
....++|+.|.|+.+ ++-|+.
T Consensus 20 eLs~~~Gd~i~v~~~~~~~W~~ 41 (60)
T 1w70_A 20 ELNFKAGDVIFLLSRINKDWLE 41 (60)
T ss_dssp BCCBCTTCEEEEEEECSSSEEE
T ss_pred CccCCCCCEEEEEEeCCCCeEE
Confidence 577899999999986 455554
No 119
>3v2d_Y 50S ribosomal protein L24; ribosome associated inhibitor A, RAIA, protein Y, stress RES stationary phase, ribosome hibernation, ribosome; 2.70A {Thermus thermophilus} PDB: 1vsp_S 2hgj_X 2hgq_X 2hgu_X 1vsa_S 2j03_Y 2jl6_Y 2jl8_Y 2v47_Y 2v49_Y 2wdi_Y 2wdj_Y 2wdl_Y 2wdn_Y 2wh2_Y 2wh4_Y 2wrj_Y 2wrl_Y 2wro_Y 2wrr_Y ...
Probab=34.71 E-value=33 Score=24.27 Aligned_cols=30 Identities=20% Similarity=0.245 Sum_probs=23.7
Q ss_pred CCCCCCCeeEEeeccceeccccceEEEEccCC
Q 033136 80 IGPKRGAKVKILRRESYWYNGIGSVVAVDQVR 111 (126)
Q Consensus 80 igp~RGskVrIlR~ESYWyn~vGtVvsVDq~~ 111 (126)
.-+++||.|.|++-.. -...|+|..|+...
T Consensus 5 ~~IkkGD~V~Vi~Gkd--KGk~GkV~~V~~~~ 34 (110)
T 3v2d_Y 5 MHVKKGDTVLVASGKY--KGRVGKVKEVLPKK 34 (110)
T ss_dssp CSCCTTSEEEECSSTT--TTCEEEEEEEEGGG
T ss_pred cccCCCCEEEEeEcCC--CCeEeEEEEEECCC
Confidence 4578999999998752 35679999999763
No 120
>2kt8_A Probable surface protein; SH3 family, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; NMR {Clostridium perfringens} PDB: 2kyb_A
Probab=34.33 E-value=17 Score=22.97 Aligned_cols=18 Identities=28% Similarity=0.440 Sum_probs=15.8
Q ss_pred CCCCCeeEEeeccceecc
Q 033136 82 PKRGAKVKILRRESYWYN 99 (126)
Q Consensus 82 p~RGskVrIlR~ESYWyn 99 (126)
..+|++|+|+.++.-||+
T Consensus 29 l~~G~~v~vl~~~~~W~k 46 (76)
T 2kt8_A 29 LSGNTKVTIVGEEGAFYK 46 (76)
T ss_dssp ECTTCEEEEEEEETTEEE
T ss_pred ECCCCEEEEEEEeCCEEE
Confidence 568999999998888986
No 121
>1csk_A C-SRC SH3 domain; phosphotransferase; 2.50A {Homo sapiens} SCOP: b.34.2.1
Probab=34.27 E-value=33 Score=20.38 Aligned_cols=22 Identities=18% Similarity=0.536 Sum_probs=16.9
Q ss_pred CCCCCCCCCeeEEee--ccceecc
Q 033136 78 PPIGPKRGAKVKILR--RESYWYN 99 (126)
Q Consensus 78 ppigp~RGskVrIlR--~ESYWyn 99 (126)
.....++|+.|.|+. .++-|+.
T Consensus 26 ~eLs~~~Gd~i~v~~~~~~~~Ww~ 49 (71)
T 1csk_A 26 QDLPFCKGDVLTIVAVTKDPNWYK 49 (71)
T ss_dssp TBCCBCTTCEEEEEEECSSTTEEE
T ss_pred CcCCCCCCCEEEEeECCCCCCCEE
Confidence 367889999999998 3456664
No 122
>2ew3_A SH3-containing GRB2-like protein 3; SH3GL3, solution structure, signaling protein; NMR {Homo sapiens}
Probab=34.17 E-value=34 Score=20.62 Aligned_cols=21 Identities=24% Similarity=0.695 Sum_probs=16.4
Q ss_pred CCCCCCCCeeEEeec-cceecc
Q 033136 79 PIGPKRGAKVKILRR-ESYWYN 99 (126)
Q Consensus 79 pigp~RGskVrIlR~-ESYWyn 99 (126)
....++|+.|.|+.+ +.-|+.
T Consensus 19 eLsf~~Gd~i~v~~~~~~~Ww~ 40 (68)
T 2ew3_A 19 ELGFKEGDIITLTNQIDENWYE 40 (68)
T ss_dssp BCCBCTTCEEEEEEESSSSEEE
T ss_pred ccCCCCCCEEEEEEecCCCEEE
Confidence 577899999999986 455554
No 123
>1x69_A Cortactin isoform A; SH3 domain, CTTN, oncogene EMS1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=34.13 E-value=34 Score=20.89 Aligned_cols=22 Identities=9% Similarity=0.250 Sum_probs=17.0
Q ss_pred CCCCCCCCCeeEEeec-cceecc
Q 033136 78 PPIGPKRGAKVKILRR-ESYWYN 99 (126)
Q Consensus 78 ppigp~RGskVrIlR~-ESYWyn 99 (126)
.....++|+.|.|+.+ +.-|+.
T Consensus 32 ~eLs~~~Gd~i~v~~~~~~~Ww~ 54 (79)
T 1x69_A 32 DEISFDPDDIITNIEMIDDGWWR 54 (79)
T ss_dssp SBCCCCTTCEEEEEEECSSSEEE
T ss_pred CCcCcCCCCEEEEeEecCCCeEE
Confidence 3577899999999987 555654
No 124
>1uhc_A KIAA1010 protein; beta barrel, SH3, human cDNA, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=34.04 E-value=32 Score=20.98 Aligned_cols=16 Identities=25% Similarity=0.318 Sum_probs=14.0
Q ss_pred CCCCCCCCeeEEeecc
Q 033136 79 PIGPKRGAKVKILRRE 94 (126)
Q Consensus 79 pigp~RGskVrIlR~E 94 (126)
....++|+.|.||+++
T Consensus 29 eLs~~~Gd~i~vl~~~ 44 (79)
T 1uhc_A 29 ELSVSANQKLKILEFK 44 (79)
T ss_dssp BCCBCTTCEEEEEESC
T ss_pred ccCCCCCCEEEEEECC
Confidence 5778999999999985
No 125
>3ulr_B SRC substrate cortactin; SH3, protein-protein interaction, hydrolase, protein binding; 1.65A {Mus musculus} SCOP: b.34.2.0 PDB: 2d1x_A
Probab=33.84 E-value=40 Score=19.38 Aligned_cols=21 Identities=10% Similarity=0.273 Sum_probs=16.9
Q ss_pred CCCCCCCCeeEEeec-cceecc
Q 033136 79 PIGPKRGAKVKILRR-ESYWYN 99 (126)
Q Consensus 79 pigp~RGskVrIlR~-ESYWyn 99 (126)
....++|+.|.|+.+ +.-|+.
T Consensus 25 eLs~~~Gd~i~v~~~~~~~Ww~ 46 (65)
T 3ulr_B 25 EISFDPDDIITNIEMIDDGWWR 46 (65)
T ss_dssp BCCBCTTCEEEEEECCSSSEEE
T ss_pred EeeEecCCEEEEEEecCCCEEE
Confidence 578899999999988 456664
No 126
>1i1j_A Melanoma derived growth regulatory protein; SH3 subdomain, hormone/growth factor complex; 1.39A {Homo sapiens} SCOP: b.34.2.1 PDB: 1k0x_A 1hjd_A
Probab=33.77 E-value=26 Score=23.71 Aligned_cols=15 Identities=20% Similarity=0.317 Sum_probs=13.6
Q ss_pred CCCCCCCCeeEEeec
Q 033136 79 PIGPKRGAKVKILRR 93 (126)
Q Consensus 79 pigp~RGskVrIlR~ 93 (126)
....++|+.|.||++
T Consensus 38 ELsf~~GDiI~Vl~k 52 (108)
T 1i1j_A 38 FLTIHRGQVVYVFSK 52 (108)
T ss_dssp BCCBCTTCEEEEEEE
T ss_pred ccccCCCCEEEEEEe
Confidence 577899999999998
No 127
>4f14_A Nebulette; SH3 domain, heart muscle, actin-binding protein-peptide COMP; 1.20A {Homo sapiens} PDB: 1ark_A 1neb_A 3i35_A
Probab=33.72 E-value=41 Score=19.15 Aligned_cols=21 Identities=10% Similarity=0.297 Sum_probs=16.4
Q ss_pred CCCCCCCCeeEEeec-cceecc
Q 033136 79 PIGPKRGAKVKILRR-ESYWYN 99 (126)
Q Consensus 79 pigp~RGskVrIlR~-ESYWyn 99 (126)
....++|+.|.|+.+ ++-|+.
T Consensus 22 eLs~~~Gd~i~v~~~~~~~W~~ 43 (64)
T 4f14_A 22 EVSFRDGDYIVNVQPIDDGWMY 43 (64)
T ss_dssp BCCBCTTCEEEEEEECSSSEEE
T ss_pred cCCCCCCCEEEEEEeCCCCeEE
Confidence 478899999999997 455653
No 128
>1hsq_A Phospholipase C-gamma (SH3 domain); phosphoric diester hydrolase; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 2hsp_A
Probab=33.70 E-value=19 Score=21.52 Aligned_cols=22 Identities=14% Similarity=0.354 Sum_probs=17.1
Q ss_pred CCCCCCCCCeeEEeec-cceecc
Q 033136 78 PPIGPKRGAKVKILRR-ESYWYN 99 (126)
Q Consensus 78 ppigp~RGskVrIlR~-ESYWyn 99 (126)
.....++|+.|.|+.+ ++-|+.
T Consensus 21 ~eLs~~~Gd~i~v~~~~~~~Ww~ 43 (71)
T 1hsq_A 21 DELTFIKSAIIQNVEKQEGGWWR 43 (71)
T ss_dssp SSCCCCTTCCCBSCCCBTTTEEC
T ss_pred CccCCCCCCEEEEEEecCCCEEE
Confidence 3678899999999986 555554
No 129
>2kxc_A Brain-specific angiogenesis inhibitor 1-associate 2-like protein 1; IRTKS-SH3, espfu, complex structure, protein binding; NMR {Homo sapiens}
Probab=33.51 E-value=22 Score=20.89 Aligned_cols=20 Identities=15% Similarity=0.358 Sum_probs=16.2
Q ss_pred CCCCCCCCeeEEeec--cceec
Q 033136 79 PIGPKRGAKVKILRR--ESYWY 98 (126)
Q Consensus 79 pigp~RGskVrIlR~--ESYWy 98 (126)
....++|+.|.|+.+ ++-|+
T Consensus 23 eLs~~~Gd~i~v~~~~~~~~Ww 44 (67)
T 2kxc_A 23 LLSFAQGDVITLLIPEEKDGWL 44 (67)
T ss_dssp BCCBCTTCEEEESSSSCBTTEE
T ss_pred CCcCCCCCEEEEeECCCCCCcE
Confidence 577899999999975 56666
No 130
>4esr_A Jouberin; AHI-1, AHI1, AHI-1 SH3 domain, SH3 domain, dynamin-2, protei binding, chronic myeloid leukemia; 1.53A {Homo sapiens}
Probab=32.92 E-value=38 Score=19.87 Aligned_cols=21 Identities=14% Similarity=0.536 Sum_probs=16.4
Q ss_pred CCCCCCCCeeEEeec-cceecc
Q 033136 79 PIGPKRGAKVKILRR-ESYWYN 99 (126)
Q Consensus 79 pigp~RGskVrIlR~-ESYWyn 99 (126)
....++|+.|.|+.+ ++-|+.
T Consensus 22 eLs~~~Gd~i~v~~~~~~~Ww~ 43 (69)
T 4esr_A 22 ELTIHRGDIIRVFFKDNEDWWY 43 (69)
T ss_dssp BCCBCTTCEEEEEEECSSSEEE
T ss_pred cCCCCCCCEEEEEEecCCCeEE
Confidence 578899999999987 355554
No 131
>1uff_A Intersectin 2; beta barrel, SH3 domain, endocytosis, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=32.82 E-value=33 Score=21.73 Aligned_cols=21 Identities=14% Similarity=0.366 Sum_probs=16.5
Q ss_pred CCCCCCCCeeEEeec---cceecc
Q 033136 79 PIGPKRGAKVKILRR---ESYWYN 99 (126)
Q Consensus 79 pigp~RGskVrIlR~---ESYWyn 99 (126)
....++|+.|.|+.+ +.-|+.
T Consensus 21 eLsf~~Gd~i~v~~~~~~~~gWw~ 44 (93)
T 1uff_A 21 EMSFNSGDIIQVDEKTVGEPGWLY 44 (93)
T ss_dssp CCCBCTTCEEEECSSCCCSSSEEE
T ss_pred CcCCCCCCEEEEeEccCCCCCEEE
Confidence 577899999999987 455654
No 132
>3fdr_A Tudor and KH domain-containing protein; TDRD2, structural genomics, structural genomics consortium, SGC, alternative splicing, RNA-binding; 1.75A {Homo sapiens} SCOP: b.34.9.1
Probab=32.82 E-value=95 Score=19.67 Aligned_cols=39 Identities=15% Similarity=0.189 Sum_probs=28.0
Q ss_pred CCCCCCCCCeeEEee-ccceeccccceEEEEccCCceeeeeEEEEee
Q 033136 78 PPIGPKRGAKVKILR-RESYWYNGIGSVVAVDQVRLFSIFLVYVTFN 123 (126)
Q Consensus 78 ppigp~RGskVrIlR-~ESYWyn~vGtVvsVDq~~~~~rYPVvVRF~ 123 (126)
++.-|+.|+.+-..- .+.-||. +.|.+|+.++. +.|+|-
T Consensus 24 ~~~~~~~G~~c~a~~~~d~~wyR--A~I~~~~~~~~-----~~V~fv 63 (94)
T 3fdr_A 24 EDLTVHVGDIVAAPLPTNGSWYR--ARVLGTLENGN-----LDLYFV 63 (94)
T ss_dssp CCCCCCTTCEEEEEETTTTEEEE--EEEEEECTTSC-----EEEEET
T ss_pred CCCCCCCCCEEEEEECCCCeEEE--EEEEEECCCCe-----EEEEEE
Confidence 456789999997764 4778997 67888876543 456664
No 133
>1xov_A PLY protein, plypsa; alpha/beta hydrolase, multi-domain, hydrolase; 1.80A {Listeria phage psa} SCOP: b.34.11.4 c.56.5.6
Probab=32.70 E-value=26 Score=28.23 Aligned_cols=17 Identities=29% Similarity=0.898 Sum_probs=15.6
Q ss_pred CCCCeeEEeeccceecc
Q 033136 83 KRGAKVKILRRESYWYN 99 (126)
Q Consensus 83 ~RGskVrIlR~ESYWyn 99 (126)
..|++|.|++++.|||+
T Consensus 221 ~~G~~v~V~~~~g~Wy~ 237 (326)
T 1xov_A 221 KAGSSLLVYEHNKYWYK 237 (326)
T ss_dssp ETTCEEEEEECSSSEEE
T ss_pred eCCCEEEEEecCCCEEE
Confidence 47999999999999997
No 134
>3iz5_Y 60S ribosomal protein L26 (L24P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_Y
Probab=32.45 E-value=37 Score=25.54 Aligned_cols=30 Identities=27% Similarity=0.343 Sum_probs=23.5
Q ss_pred CCCCCCCeeEEeeccceeccccceEEEEccCC
Q 033136 80 IGPKRGAKVKILRRESYWYNGIGSVVAVDQVR 111 (126)
Q Consensus 80 igp~RGskVrIlR~ESYWyn~vGtVvsVDq~~ 111 (126)
.-+++||.|.|++-.. =...|+|..|+...
T Consensus 47 ~~IkKGD~V~Vi~Gkd--KGk~GkVl~V~~kk 76 (150)
T 3iz5_Y 47 IPIRKDDEVQVVRGSY--KGREGKVVQVYRRR 76 (150)
T ss_dssp EECCSSSEEEECSSTT--TTCEEEEEEEETTT
T ss_pred cccCCCCEEEEeecCC--CCccceEEEEEcCC
Confidence 3578999999999752 34579999999763
No 135
>2ekh_A SH3 and PX domain-containing protein 2A; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=32.44 E-value=43 Score=20.58 Aligned_cols=20 Identities=30% Similarity=0.669 Sum_probs=15.5
Q ss_pred CCCCCCCCeeEEeecc-ceec
Q 033136 79 PIGPKRGAKVKILRRE-SYWY 98 (126)
Q Consensus 79 pigp~RGskVrIlR~E-SYWy 98 (126)
....++|+.|.||+++ +-|+
T Consensus 24 eLs~~~Gd~i~vl~~~~~gWw 44 (80)
T 2ekh_A 24 EISFPAGVEVQVLEKQESGWW 44 (80)
T ss_dssp SCCBCTTCEEEEEEECTTSEE
T ss_pred ccCcCCCCEEEEEEeCCCCeE
Confidence 5778999999999874 4344
No 136
>2fei_A CD2-associated protein; CMS SH3 domain, structural protein; NMR {Homo sapiens}
Probab=32.31 E-value=31 Score=20.71 Aligned_cols=22 Identities=27% Similarity=0.540 Sum_probs=17.1
Q ss_pred CCCCCCCCeeEEeec-cceeccc
Q 033136 79 PIGPKRGAKVKILRR-ESYWYNG 100 (126)
Q Consensus 79 pigp~RGskVrIlR~-ESYWyn~ 100 (126)
....++|+.|.|+.+ ++-|+..
T Consensus 17 eLs~~~Gd~i~v~~~~~~gWw~g 39 (65)
T 2fei_A 17 ELELKVGDIIDINEEVEEGWWSG 39 (65)
T ss_dssp BCCCCTTCEEECCCCSSSSEEEE
T ss_pred ccCCCCCCEEEEEEecCCCEEEE
Confidence 577899999999987 4566643
No 137
>1jo8_A ABP1P, actin binding protein; SH3 domain actin-binding-protein, structural protein; 1.30A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 2k3b_A 2rpn_A
Probab=31.78 E-value=43 Score=19.05 Aligned_cols=21 Identities=10% Similarity=0.290 Sum_probs=15.8
Q ss_pred CCCCCCCCCeeEEeec--cceec
Q 033136 78 PPIGPKRGAKVKILRR--ESYWY 98 (126)
Q Consensus 78 ppigp~RGskVrIlR~--ESYWy 98 (126)
.....++|+.|.|+++ +.+|+
T Consensus 15 ~eLs~~~Gd~i~v~~~~~~~Ww~ 37 (58)
T 1jo8_A 15 NELTFVENDKIINIEFVDDDWWL 37 (58)
T ss_dssp TBCCBCTTCEEEEEECCSSSEEE
T ss_pred CCcccCCCCEEEEEEecCCCcEE
Confidence 3577899999999996 34444
No 138
>1x2q_A Signal transducing adapter molecule 2; SH3 domain, signal transducing adaptor molecule, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=31.71 E-value=41 Score=20.99 Aligned_cols=21 Identities=19% Similarity=0.551 Sum_probs=16.2
Q ss_pred CCCCCCCCeeEEeec-cceecc
Q 033136 79 PIGPKRGAKVKILRR-ESYWYN 99 (126)
Q Consensus 79 pigp~RGskVrIlR~-ESYWyn 99 (126)
....++|+.|.|+.+ +.-|+.
T Consensus 33 eLsf~~Gd~i~v~~~~~~~Ww~ 54 (88)
T 1x2q_A 33 ELTFKHGEIIIVLDDSDANWWK 54 (88)
T ss_dssp CCCCCSSCEEEEEECSCSSSEE
T ss_pred ccCCCCCCEEEEEEeCCCCEEE
Confidence 577899999999987 345553
No 139
>1wi7_A SH3-domain kinase binding protein 1; beta barrel, SH3KBP1, RUK, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus}
Probab=31.41 E-value=25 Score=20.72 Aligned_cols=21 Identities=19% Similarity=0.512 Sum_probs=16.4
Q ss_pred CCCCCCCCeeEEeec-cceecc
Q 033136 79 PIGPKRGAKVKILRR-ESYWYN 99 (126)
Q Consensus 79 pigp~RGskVrIlR~-ESYWyn 99 (126)
....++|+.|.|+.+ +.-|+.
T Consensus 23 eLs~~~Gd~i~v~~~~~~~Ww~ 44 (68)
T 1wi7_A 23 ELELKVGDIIEVVGEVEEGWWE 44 (68)
T ss_dssp BCCBCTTCEECCCEEEETTEEE
T ss_pred CccCcCCCEEEEEEcCCCCeEE
Confidence 577899999999987 455553
No 140
>1b07_A Protein (proto-oncogene CRK (CRK)); SH3 domain, inhibitors, peptoids, protein-protein recognition, proline-rich motifs, signal transduction; 2.50A {Mus musculus} SCOP: b.34.2.1
Probab=31.40 E-value=47 Score=19.74 Aligned_cols=20 Identities=20% Similarity=0.531 Sum_probs=15.4
Q ss_pred CCCCCCCCeeEEeecc-ceec
Q 033136 79 PIGPKRGAKVKILRRE-SYWY 98 (126)
Q Consensus 79 pigp~RGskVrIlR~E-SYWy 98 (126)
....++|+.|.|+.+. +=|+
T Consensus 19 eLsf~~Gd~i~v~~~~~~~Ww 39 (65)
T 1b07_A 19 DLPFKKGDILRIRDKPEEQWW 39 (65)
T ss_dssp BCCBCTTCEEEEEECSSSSEE
T ss_pred ccCCcCCCEEEEEEecCCCeE
Confidence 5678999999999973 4444
No 141
>3fo8_D Tail sheath protein GP18; mostly beta, viral structural protein, bacteriophage T4, viral protein; 1.80A {Enterobacteria phage T4}
Probab=31.40 E-value=41 Score=27.91 Aligned_cols=33 Identities=15% Similarity=0.020 Sum_probs=23.7
Q ss_pred CCCCCCCCeeEEeeccceeccccceEEEEccCCc
Q 033136 79 PIGPKRGAKVKILRRESYWYNGIGSVVAVDQVRL 112 (126)
Q Consensus 79 pigp~RGskVrIlR~ESYWyn~vGtVvsVDq~~~ 112 (126)
-.+-.-|++|+|+--- ==-.+-|+|..||.+|+
T Consensus 25 GsnY~VGD~i~Vky~~-~vve~~GkVT~VD~dGk 57 (283)
T 3fo8_D 25 GSNYAVGDKITVKYVS-DDIETEGKITEVDADGK 57 (283)
T ss_dssp CBSCCTTCEEEEEETT-EEEEEEEEEEEECTTCC
T ss_pred CCCceeCCEEEEEEcC-cEEecCceEEEEcCCCC
Confidence 3466789999998432 11123499999999998
No 142
>2dl8_A SLIT-ROBO RHO GTPase-activating protein 2; SH3 domain, formin-binding protein 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=31.23 E-value=38 Score=20.29 Aligned_cols=20 Identities=25% Similarity=0.647 Sum_probs=15.6
Q ss_pred CCCCCCCCeeEEeec-cceec
Q 033136 79 PIGPKRGAKVKILRR-ESYWY 98 (126)
Q Consensus 79 pigp~RGskVrIlR~-ESYWy 98 (126)
....++|+.|.|+.+ +.-|+
T Consensus 25 eLs~~~Gd~i~v~~~~~~~Ww 45 (72)
T 2dl8_A 25 ELSFKKGASLLLYQRASDDWW 45 (72)
T ss_dssp BCCBCTTCEEEEEEEEETTEE
T ss_pred EeccCCCCEEEEEeecCCCEE
Confidence 577899999999987 44454
No 143
>2csi_A RIM-BP2, RIM binding protein 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=31.12 E-value=37 Score=20.58 Aligned_cols=23 Identities=9% Similarity=0.145 Sum_probs=17.0
Q ss_pred CCCCCCCCCCeeEEeecc--ceecc
Q 033136 77 PPPIGPKRGAKVKILRRE--SYWYN 99 (126)
Q Consensus 77 pppigp~RGskVrIlR~E--SYWyn 99 (126)
+-....++|+.|.|+.+. .-|+.
T Consensus 28 ~~eLsf~~Gd~i~v~~~~~~~gWw~ 52 (76)
T 2csi_A 28 EAELTFCTGDIITVFGEIDEDGFYY 52 (76)
T ss_dssp TTSCCCCTTCEEEEESSCCSSSEEE
T ss_pred CCcccCCCCCEEEEeEecCCCCeEE
Confidence 346778999999999873 34554
No 144
>1gl5_A Tyrosine-protein kinase TEC; transferase, ATP-binding, SH3 domain, phosphorylation; NMR {Mus musculus} SCOP: b.34.2.1
Probab=31.09 E-value=44 Score=19.62 Aligned_cols=22 Identities=23% Similarity=0.520 Sum_probs=16.8
Q ss_pred CCCCCCCCCeeEEeecc-ceecc
Q 033136 78 PPIGPKRGAKVKILRRE-SYWYN 99 (126)
Q Consensus 78 ppigp~RGskVrIlR~E-SYWyn 99 (126)
.....++|+.|.|+.+. .-|+.
T Consensus 17 ~eLs~~~Gd~i~v~~~~~~~Ww~ 39 (67)
T 1gl5_A 17 HDLRLERGQEYIILEKNDLHWWR 39 (67)
T ss_dssp SBCCBCTTCEEEEEECSSSSEEE
T ss_pred CeecCCcCCEEEEEEccCCCcEE
Confidence 35778999999999984 45553
No 145
>4e6r_A Cytoplasmic protein NCK2; SH3 domain, protein binding, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MLY; 2.20A {Homo sapiens} PDB: 2frw_A 2js0_A
Probab=30.83 E-value=49 Score=18.48 Aligned_cols=22 Identities=18% Similarity=0.561 Sum_probs=17.4
Q ss_pred CCCCCCCCeeEEeecc-ceeccc
Q 033136 79 PIGPKRGAKVKILRRE-SYWYNG 100 (126)
Q Consensus 79 pigp~RGskVrIlR~E-SYWyn~ 100 (126)
....++|+.|.|+.+. +-|+..
T Consensus 17 eLs~~~Gd~i~v~~~~~~~W~~g 39 (58)
T 4e6r_A 17 ELSLVXGSRVTVMEXCSDGWWRG 39 (58)
T ss_dssp BCCBCTTCEEEEEEECTTSEEEE
T ss_pred EeeEeCCCEEEEeEcCCCCEEEE
Confidence 4788999999999885 556653
No 146
>1g5v_A SurviVal motor neuron protein 1; mRNA processing, translation; NMR {Homo sapiens} SCOP: b.34.9.1
Probab=30.74 E-value=1.1e+02 Score=20.51 Aligned_cols=40 Identities=18% Similarity=0.234 Sum_probs=28.4
Q ss_pred CCCCCCCCCeeEEeec-cceeccccceEEEEccCCceeeeeEEEEee
Q 033136 78 PPIGPKRGAKVKILRR-ESYWYNGIGSVVAVDQVRLFSIFLVYVTFN 123 (126)
Q Consensus 78 ppigp~RGskVrIlR~-ESYWyn~vGtVvsVDq~~~~~rYPVvVRF~ 123 (126)
|...++.|+.+.-+-. .--||. ++|.+|+.++. . +.|+|.
T Consensus 7 ~~~~~kvGd~C~A~ys~Dg~wYr--A~I~~i~~~~~--~--~~V~fi 47 (88)
T 1g5v_A 7 SLQQWKVGDKCSAIWSEDGCIYP--ATIASIDFKRE--T--CVVVYT 47 (88)
T ss_dssp --CCCCSSCEEEEECTTTCCEEE--EEEEEEETTTT--E--EEEEET
T ss_pred ccCCCCCCCEEEEEECCCCCEEE--EEEEEecCCCC--E--EEEEEe
Confidence 3456899999998875 558997 67999988533 3 466664
No 147
>2m0y_A Dedicator of cytokinesis protein 1; apoptosis; NMR {Mus musculus}
Probab=30.52 E-value=23 Score=21.03 Aligned_cols=21 Identities=29% Similarity=0.539 Sum_probs=17.8
Q ss_pred CCCCCCCCeeEEeeccceecc
Q 033136 79 PIGPKRGAKVKILRRESYWYN 99 (126)
Q Consensus 79 pigp~RGskVrIlR~ESYWyn 99 (126)
....++|+.|.|+.++.-|+.
T Consensus 27 eLs~~~Gd~i~v~~~~~~W~~ 47 (74)
T 2m0y_A 27 ELSLQIGDTVHILETYEGWYR 47 (74)
T ss_dssp BCCEETTEEEEEEEBSSSCEE
T ss_pred cccCCCCCEEEEEEcCCCeEE
Confidence 478899999999999776775
No 148
>1aww_A ATK, AMGX1, BPK, bruton'S tyrosine kinase; X-linked agammaglobulinemia, XLA, BTK, SH3 domain, transferase; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 1awx_A 1qly_A
Probab=30.49 E-value=34 Score=20.08 Aligned_cols=22 Identities=18% Similarity=0.437 Sum_probs=16.6
Q ss_pred CCCCCCCCCeeEEeecc-ceecc
Q 033136 78 PPIGPKRGAKVKILRRE-SYWYN 99 (126)
Q Consensus 78 ppigp~RGskVrIlR~E-SYWyn 99 (126)
.....++|+.|.|+.++ .-|+.
T Consensus 23 ~eLs~~~Gd~i~v~~~~~~~Ww~ 45 (67)
T 1aww_A 23 NDLQLRKGDEYFILEESNLPWWR 45 (67)
T ss_dssp SSCCCCSSCEEECCCCCSSSEEC
T ss_pred CCccCCCCCEEEEEEccCCCcEE
Confidence 35778999999999874 45554
No 149
>2krs_A Probable enterotoxin; all beta, SH3, ENTD, CPF_0587, CPE0606, structural genomics, PSI-2, protein structure initiative; NMR {Clostridium perfringens}
Probab=30.45 E-value=17 Score=22.65 Aligned_cols=18 Identities=28% Similarity=0.667 Sum_probs=15.7
Q ss_pred CCCCCeeEEeeccceecc
Q 033136 82 PKRGAKVKILRRESYWYN 99 (126)
Q Consensus 82 p~RGskVrIlR~ESYWyn 99 (126)
..+|++|+|+..+.=||+
T Consensus 27 l~~G~~v~v~~~~~~W~k 44 (74)
T 2krs_A 27 LRNNDKVEIIKEVDGWYE 44 (74)
T ss_dssp EETTCEEEEEEEETTEEE
T ss_pred ECCCCEEEEEEEeCCEEE
Confidence 567999999998888985
No 150
>1x2k_A OSTF1, osteoclast stimulating factor 1; SH3 domain, human osteoclast stimulating factor 1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=30.44 E-value=49 Score=19.47 Aligned_cols=21 Identities=14% Similarity=0.381 Sum_probs=16.2
Q ss_pred CCCCCCCCeeEEeec-cceecc
Q 033136 79 PIGPKRGAKVKILRR-ESYWYN 99 (126)
Q Consensus 79 pigp~RGskVrIlR~-ESYWyn 99 (126)
....++|+.|.|+.+ ++-|+.
T Consensus 23 eLs~~~Gd~i~v~~~~~~~Ww~ 44 (68)
T 1x2k_A 23 ELYFEEGDIIYITDMSDTNWWK 44 (68)
T ss_dssp BCCCCSSCEEEEEECSCSSEEE
T ss_pred cccCCCCCEEEEEEcCCCCEEE
Confidence 577899999999976 345654
No 151
>3ngp_A Spectrin alpha chain, brain; beta barrel, structural protein; 1.08A {Gallus gallus} PDB: 1e7o_A 1e6g_A 1e6h_A 1uue_A 1h8k_A 2lj3_A 1aey_A 1m8m_A 1shg_A 1u06_A 2nuz_A 2cdt_A 1hd3_A 2f2v_A 2f2w_A 2jm8_A 2jm9_A 2jma_A 3m0r_A 3m0p_A ...
Probab=30.00 E-value=48 Score=18.78 Aligned_cols=21 Identities=19% Similarity=0.550 Sum_probs=16.6
Q ss_pred CCCCCCCCeeEEeecc-ceecc
Q 033136 79 PIGPKRGAKVKILRRE-SYWYN 99 (126)
Q Consensus 79 pigp~RGskVrIlR~E-SYWyn 99 (126)
....++|+.|.|+.+. .-|+.
T Consensus 22 eLs~~~Gd~i~v~~~~~~~Ww~ 43 (62)
T 3ngp_A 22 ELTVKKGDILTLLNSTNKDWWK 43 (62)
T ss_dssp BCCBCTTCEEEEEECCSSSEEE
T ss_pred CccCCCCCEEEEeEecCCCeEE
Confidence 5788999999999984 55554
No 152
>3u23_A CD2-associated protein; structural genomics, structural genomics consortium, SGC, BE barrel, adaptor protein, protein binding; 1.11A {Homo sapiens} PDB: 2krn_A
Probab=29.58 E-value=42 Score=19.15 Aligned_cols=21 Identities=24% Similarity=0.461 Sum_probs=16.5
Q ss_pred CCCCCCCCeeEEeec-cceecc
Q 033136 79 PIGPKRGAKVKILRR-ESYWYN 99 (126)
Q Consensus 79 pigp~RGskVrIlR~-ESYWyn 99 (126)
....++|+.|.|+.+ ++-|+.
T Consensus 23 eLs~~~Gd~i~v~~~~~~~W~~ 44 (65)
T 3u23_A 23 ELELKVGDIIDINEEVEEGWWS 44 (65)
T ss_dssp BCCBCTTCEEEEEEEEETTEEE
T ss_pred CcCCCCCCEEEEEEecCCCEEE
Confidence 478899999999987 355654
No 153
>2yup_A Vinexin; sorbin and SH3 domain-containing protein 3, SH3-containing adapter molecule 1, SCAM-1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=29.57 E-value=38 Score=21.20 Aligned_cols=21 Identities=19% Similarity=0.710 Sum_probs=16.2
Q ss_pred CCCCCCCCCeeEEeec-cceec
Q 033136 78 PPIGPKRGAKVKILRR-ESYWY 98 (126)
Q Consensus 78 ppigp~RGskVrIlR~-ESYWy 98 (126)
.....++|+.|.|+.+ +.-|+
T Consensus 32 ~eLsf~~Gd~i~v~~~~~~~Ww 53 (90)
T 2yup_A 32 VELSFRKGEHICLIRKVNENWY 53 (90)
T ss_dssp SBCCCCTTCEEEESSCCCSSEE
T ss_pred CcCCCCCCCEEEEEEEcCCCeE
Confidence 3577899999999986 45554
No 154
>1nm7_A Peroxisomal membrane protein PAS20; yeast, PEX5P, PEX14P, PEX13P, import machine, SH3 domain, protein transport; NMR {Saccharomyces cerevisiae} SCOP: b.34.2.1
Probab=29.44 E-value=51 Score=20.42 Aligned_cols=16 Identities=25% Similarity=0.497 Sum_probs=13.9
Q ss_pred CCCCCCCCeeEEeecc
Q 033136 79 PIGPKRGAKVKILRRE 94 (126)
Q Consensus 79 pigp~RGskVrIlR~E 94 (126)
....++|+.|.|+.++
T Consensus 24 ELsf~~Gd~i~Vl~~~ 39 (69)
T 1nm7_A 24 EVALKKGDLMAILSKK 39 (69)
T ss_dssp CCCCCTTCEEEECCSS
T ss_pred ccCCCCCCEEEEEecC
Confidence 4668999999999986
No 155
>4a17_S RPL26, 60S ribosomal protein L21; eukaryotic ribosome, ribosome, eukaryotic initiation factor 60S, translation, large ribosomal subunit; 3.52A {Tetrahymena thermophila} PDB: 4a1a_S 4a1c_S 4a1e_S
Probab=29.39 E-value=46 Score=24.57 Aligned_cols=29 Identities=21% Similarity=0.326 Sum_probs=22.9
Q ss_pred CCCCCCeeEEeeccceeccccceEEEEccCC
Q 033136 81 GPKRGAKVKILRRESYWYNGIGSVVAVDQVR 111 (126)
Q Consensus 81 gp~RGskVrIlR~ESYWyn~vGtVvsVDq~~ 111 (126)
-+++||.|.|++-. .=...|+|..|+...
T Consensus 48 ~IkkgD~V~Vi~Gk--dKGk~GkV~~V~~kk 76 (135)
T 4a17_S 48 PVRKDDEVLIVRGK--FKGNKGKVTQVYRKK 76 (135)
T ss_dssp ECCTTCEEEECSST--TTTCEEEEEEEETTT
T ss_pred cccCCCEEEEeecC--CCCceeeEEEEEcCC
Confidence 37899999999975 234579999999763
No 156
>2ebp_A SAM and SH3 domain-containing protein 1; proline-glutamate repeat-containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2kea_A
Probab=29.34 E-value=43 Score=20.37 Aligned_cols=22 Identities=14% Similarity=0.223 Sum_probs=16.8
Q ss_pred CCCCCCCCCeeEEeec-cceecc
Q 033136 78 PPIGPKRGAKVKILRR-ESYWYN 99 (126)
Q Consensus 78 ppigp~RGskVrIlR~-ESYWyn 99 (126)
-....++|+.|.|+++ +.-|+.
T Consensus 26 ~eLs~~~Gd~i~v~~~~~~gWw~ 48 (73)
T 2ebp_A 26 DSLKLKKGDIIDIISKPPMGTWM 48 (73)
T ss_dssp SBCCBCSSCEEEEEECCSSSCEE
T ss_pred CccCCCCCCEEEEEEeCCCCeEE
Confidence 3577899999999987 455554
No 157
>2dm1_A Protein VAV-2; RHO family guanine nucleotide exchange factor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=29.32 E-value=35 Score=20.47 Aligned_cols=16 Identities=25% Similarity=0.418 Sum_probs=13.9
Q ss_pred CCCCCCCCeeEEeecc
Q 033136 79 PIGPKRGAKVKILRRE 94 (126)
Q Consensus 79 pigp~RGskVrIlR~E 94 (126)
....++|+.|.|+.+.
T Consensus 23 eLs~~~Gd~i~v~~~~ 38 (73)
T 2dm1_A 23 ELSLREGDVVRIYSRI 38 (73)
T ss_dssp BCCBCTTCEEECCBSS
T ss_pred cCCCCCCCEEEEEEec
Confidence 5778999999999974
No 158
>4d8k_A Tyrosine-protein kinase LCK; protein kinases, SH2 domain, SH3 domain, structural genomics center for structural genomics, JCSG; 2.36A {Homo sapiens} PDB: 1lck_A* 1x27_A*
Probab=29.16 E-value=43 Score=23.19 Aligned_cols=23 Identities=22% Similarity=0.684 Sum_probs=19.1
Q ss_pred CCCCCCCCCeeEEeeccceeccc
Q 033136 78 PPIGPKRGAKVKILRRESYWYNG 100 (126)
Q Consensus 78 ppigp~RGskVrIlR~ESYWyn~ 100 (126)
-....++|+.++|+.++.-|+..
T Consensus 27 ~eLs~~~Gd~i~v~~~~~~Ww~~ 49 (175)
T 4d8k_A 27 GDLGFEKGEQLRILEQSGEWWKA 49 (175)
T ss_dssp SBCCBCTTCEEEEEECCSSEEEE
T ss_pred cccccccCCEEEEEccCCCEEEE
Confidence 35788999999999998888753
No 159
>2epd_A RHO GTPase-activating protein 4; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=29.14 E-value=27 Score=21.22 Aligned_cols=20 Identities=25% Similarity=0.655 Sum_probs=15.8
Q ss_pred CCCCCCCCeeEEeec-cceec
Q 033136 79 PIGPKRGAKVKILRR-ESYWY 98 (126)
Q Consensus 79 pigp~RGskVrIlR~-ESYWy 98 (126)
....++|+.|.|+.+ +.-|+
T Consensus 26 eLs~~~Gd~i~v~~~~~~~Ww 46 (76)
T 2epd_A 26 ELSFRRGDVLRLHERASSDWW 46 (76)
T ss_dssp BCEECTTCEEEEEEEEETTEE
T ss_pred ccCCCCCCEEEEEEeCCCCEE
Confidence 467899999999997 45555
No 160
>2r58_A Polycomb protein SCM; MBT repeat, sex COMB on midleg, DI-methyl lysine, regulator, developmental protein, metal-binding, nucleus; HET: MLY; 2.00A {Drosophila melanogaster} PDB: 2r57_A* 2r5a_A* 2r5m_A*
Probab=29.06 E-value=1.3e+02 Score=23.74 Aligned_cols=56 Identities=23% Similarity=0.208 Sum_probs=0.0
Q ss_pred ccCCCCCCCCCCCCCCCCCCCCCCCeeEEeeccceeccccceEEEEccCCceeeeeEEEEee
Q 033136 62 TTAAPAEGEAAPKPKPPPIGPKRGAKVKILRRESYWYNGIGSVVAVDQVRLFSIFLVYVTFN 123 (126)
Q Consensus 62 ~~aap~~~~~a~k~kpppigp~RGskVrIlR~ESYWyn~vGtVvsVDq~~~~~rYPVvVRF~ 123 (126)
+.++|+.-=....+.+..-+.+.|.|+...-+-.=..=-+.||+.|+ |. | +.|+||
T Consensus 124 a~~aP~~lF~~~~~~~~~~~F~vGMKLEavD~~np~~icvATV~~v~--g~--r--l~v~fD 179 (265)
T 2r58_A 124 AMVAPEEIFQPEPPEPEENLFKVGQKLEAVDKKNPQLICCATVDAIK--DD--Q--IHVTFD 179 (265)
T ss_dssp CCBCCGGGSCCCCCCCSSCCCCTTCEEEEECTTSTTCEEEEEEEEEE--TT--E--EEEEET
T ss_pred CccCCHHHhcccCCCCcccccccCcEEEeccCCCCCCEEEEEEEEec--CC--E--EEEEeC
No 161
>3r8s_U 50S ribosomal protein L24; protein biosynthesis, RNA, tRNA, transfer RNA, 23S ribosomal subunit, ribosome recycling factor, RRF, ribosome; 3.00A {Escherichia coli} PDB: 2j28_U* 3fik_U 3j19_U 2wwq_U 3oat_U* 3oas_U* 3ofd_U 3ofc_U 3ofr_U* 3ofz_U* 3og0_U 3ofq_U 3r8t_U 3i1n_U 1vs8_U 1vs6_U 1vt2_U 3i1p_U 3i1r_U 3i1t_U ...
Probab=29.04 E-value=45 Score=23.21 Aligned_cols=27 Identities=22% Similarity=0.202 Sum_probs=22.2
Q ss_pred CCCCCeeEEeeccceeccccceEEEEccC
Q 033136 82 PKRGAKVKILRRESYWYNGIGSVVAVDQV 110 (126)
Q Consensus 82 p~RGskVrIlR~ESYWyn~vGtVvsVDq~ 110 (126)
+++||.|.|++-.. -...|+|..|+..
T Consensus 4 IkkGD~V~Vi~Gkd--KGk~GkV~~V~~~ 30 (102)
T 3r8s_U 4 IRRDDEVIVLTGKD--KGKRGKVKNVLSS 30 (102)
T ss_dssp SCSSCEEEECSSSS--TTCEEEEEEEETT
T ss_pred ccCCCEEEEeEcCC--CCeeeEEEEEEeC
Confidence 68999999998752 3567999999986
No 162
>2ege_A Uncharacterized protein KIAA1666; SH3 domain, KIAA1666 protein, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=29.01 E-value=38 Score=20.56 Aligned_cols=22 Identities=14% Similarity=0.264 Sum_probs=16.1
Q ss_pred CCCCCCCCCeeEEeec--cceecc
Q 033136 78 PPIGPKRGAKVKILRR--ESYWYN 99 (126)
Q Consensus 78 ppigp~RGskVrIlR~--ESYWyn 99 (126)
.....++|+.|+|+.+ +.-|+.
T Consensus 29 ~eLsf~~Gd~i~v~~~~~~~gWw~ 52 (75)
T 2ege_A 29 GRLALRAGDVVMVYGPMDDQGFYY 52 (75)
T ss_dssp CBCCBCTTCEEEEESCCCTTCEEE
T ss_pred CcceECCCCEEEEeEccCCCCEEE
Confidence 3567899999999963 555554
No 163
>2jgs_A Circular permutant of avidin; biotin-binding protein, glycoprotein; HET: BTN; 1.9A {Gallus gallus}
Probab=28.33 E-value=16 Score=27.25 Aligned_cols=19 Identities=37% Similarity=0.620 Sum_probs=14.2
Q ss_pred ceeccccce---EEEEccCCce
Q 033136 95 SYWYNGIGS---VVAVDQVRLF 113 (126)
Q Consensus 95 SYWyn~vGt---VvsVDq~~~~ 113 (126)
-=|+|+.|+ |.+||..|.|
T Consensus 100 G~W~n~lgs~m~i~~v~~~G~f 121 (130)
T 2jgs_A 100 GKWTNDLGSNMTIGAVNSRGEF 121 (130)
T ss_dssp EEEECTTCCEEEECCCCSSCEE
T ss_pred eEEehhcCCeEEEEEeccCcEE
Confidence 459999996 4556778764
No 164
>3e4w_A Putative uncharacterized protein; heme enzyme, catalase, peroxidase, oxidoreductase; HET: HEM; 1.80A {Mycobacterium avium subsp} PDB: 3e4y_A*
Probab=28.13 E-value=31 Score=27.89 Aligned_cols=11 Identities=9% Similarity=0.126 Sum_probs=10.0
Q ss_pred eeeEEEEeeec
Q 033136 115 IFLVYVTFNHF 125 (126)
Q Consensus 115 rYPVvVRF~kv 125 (126)
+|||+|||..+
T Consensus 64 ~tpv~vRFSt~ 74 (320)
T 3e4w_A 64 TVPALIRFSNG 74 (320)
T ss_dssp EEEEEEEEEES
T ss_pred eeEEEEEeccC
Confidence 89999999876
No 165
>2jvv_A Transcription antitermination protein NUSG; transcription factor, transcription regulation, transcription termination; NMR {Escherichia coli} PDB: 2k06_A 2kvq_G
Probab=28.04 E-value=1.1e+02 Score=21.59 Aligned_cols=32 Identities=22% Similarity=0.177 Sum_probs=25.3
Q ss_pred CCCCCCCCCeeEEeeccceeccccceEEEEccCC
Q 033136 78 PPIGPKRGAKVKILRRESYWYNGIGSVVAVDQVR 111 (126)
Q Consensus 78 ppigp~RGskVrIlR~ESYWyn~vGtVvsVDq~~ 111 (126)
+.+..+.|++|||.- -=+-+-.|+|..||.+.
T Consensus 124 ~~~~~~~Gd~V~V~~--GPf~g~~G~v~~v~~~k 155 (181)
T 2jvv_A 124 PKTLFEPGEMVRVND--GPFADFNGVVEEVDYEK 155 (181)
T ss_dssp CCCCCCTTEEEEECS--STTTTEEEEEEEEETTT
T ss_pred ccccCCCCCEEEEec--cCCCCcEEEEEEEeCCC
Confidence 355788999999984 45667789999999764
No 166
>2eqj_A Metal-response element-binding transcription factor 2; structure genomics,tudor domain, zinc-regulated factor 1, ZIRF1; NMR {Mus musculus}
Probab=27.68 E-value=1.4e+02 Score=19.85 Aligned_cols=45 Identities=16% Similarity=0.407 Sum_probs=29.7
Q ss_pred CCCCCCCCCCCCCeeEEeeccceeccccceEEEEccCCceeeeeEEEEeee
Q 033136 74 KPKPPPIGPKRGAKVKILRRESYWYNGIGSVVAVDQVRLFSIFLVYVTFNH 124 (126)
Q Consensus 74 k~kpppigp~RGskVrIlR~ESYWyn~vGtVvsVDq~~~~~rYPVvVRF~k 124 (126)
+.+.++..-+-|+-|+--=..---| .|+|..||+... . .+|+|++
T Consensus 6 ~~~~~~~~f~vGddVLA~wtDGl~Y--~gtI~~V~~~~g--t--C~V~F~D 50 (66)
T 2eqj_A 6 SGKKPACKFEEGQDVLARWSDGLFY--LGTIKKINILKQ--S--CFIIFED 50 (66)
T ss_dssp CCCCCCCCSCTTCEEEEECTTSCEE--EEEEEEEETTTT--E--EEEEETT
T ss_pred ccccccccccCCCEEEEEEccCcEE--EeEEEEEccCCc--E--EEEEEcc
Confidence 3455567889999997542222222 599999999644 2 5788863
No 167
>2eqi_A Phospholipase C, gamma 2; SH3 domain, PLCG2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=27.07 E-value=39 Score=19.91 Aligned_cols=20 Identities=20% Similarity=0.428 Sum_probs=15.5
Q ss_pred CCCCCCCCeeEEeec-cceec
Q 033136 79 PIGPKRGAKVKILRR-ESYWY 98 (126)
Q Consensus 79 pigp~RGskVrIlR~-ESYWy 98 (126)
....++|+.|.|+.+ +.-|+
T Consensus 23 eLs~~~Gd~i~v~~~~~~~Ww 43 (69)
T 2eqi_A 23 ELTFCRGALIHNVSKEPGGWW 43 (69)
T ss_dssp CCCBCTTCEEESCCCCSSSCE
T ss_pred ccCCCCCCEEEEEEcCCCCeE
Confidence 577899999999975 44554
No 168
>1d1n_A Initiation factor 2; beta-barrel, gene regulation; NMR {Geobacillus stearothermophilus} SCOP: b.43.3.1
Probab=27.01 E-value=28 Score=24.38 Aligned_cols=17 Identities=29% Similarity=0.511 Sum_probs=13.6
Q ss_pred CCCCCeeEEeeccceec
Q 033136 82 PKRGAKVKILRRESYWY 98 (126)
Q Consensus 82 p~RGskVrIlR~ESYWy 98 (126)
++|+++||+||.---=|
T Consensus 33 i~r~~~vRv~Rd~~vI~ 49 (99)
T 1d1n_A 33 ITRDSKVRLIRQGIVVY 49 (99)
T ss_dssp CCSSSEEEEECSSSEEE
T ss_pred EEcCCeEEEEECCEEEE
Confidence 68999999999854444
No 169
>3h6z_A Polycomb protein SFMBT; MBT, MBR repeat, aromatic CAGE, chromatin regulator, DNA-BIN metal-binding, nucleus, repressor, transcription; HET: MLZ SUC; 2.80A {Drosophila melanogaster}
Probab=26.73 E-value=47 Score=28.05 Aligned_cols=37 Identities=16% Similarity=0.316 Sum_probs=26.5
Q ss_pred CCCCCCCCeeEEe--------------eccceeccccceEEEEccCCceeeeeEEEEeee
Q 033136 79 PIGPKRGAKVKIL--------------RRESYWYNGIGSVVAVDQVRLFSIFLVYVTFNH 124 (126)
Q Consensus 79 pigp~RGskVrIl--------------R~ESYWyn~vGtVvsVDq~~~~~rYPVvVRF~k 124 (126)
.-+++.|.||.+. .+.+|| |++|.+. +-|=+.+||+.
T Consensus 34 ~~~~~~GMklEv~~~~~~~~~~~~~~~~p~~~W------vAtV~~~---~G~rLlLry~G 84 (447)
T 3h6z_A 34 WDNLGVGMKVEVENTDCDSIEVIQPGQTPTSFW------VATILEI---KGYKALMSYEG 84 (447)
T ss_dssp HTTCCTTCEEEEC----------------CCBE------EEEEEEE---ETTEEEEEETT
T ss_pred hhhcCCCCEEEEecCCcccccccccccCCCcEE------EEEEhhh---cccEEEEEEcc
Confidence 3689999999985 356899 6666664 23668889874
No 170
>2v1r_A Peroxisomal membrane protein PAS20; protein transport, translocation, transmembrane, peptide COM structural genomics, peroxisome; 2.1A {Saccharomyces cerevisiae} SCOP: b.34.2.1
Probab=26.17 E-value=56 Score=19.68 Aligned_cols=16 Identities=25% Similarity=0.497 Sum_probs=14.2
Q ss_pred CCCCCCCCeeEEeecc
Q 033136 79 PIGPKRGAKVKILRRE 94 (126)
Q Consensus 79 pigp~RGskVrIlR~E 94 (126)
....++|+.|.|+.+.
T Consensus 31 eLs~~~Gd~i~v~~~~ 46 (80)
T 2v1r_A 31 EVALKKGDLMAILSKK 46 (80)
T ss_dssp BCCBCTTCEEEEEEEE
T ss_pred EecCCCCCEEEEEECC
Confidence 5778999999999986
No 171
>2eyx_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH3, signaling protein; NMR {Homo sapiens}
Probab=26.05 E-value=37 Score=20.10 Aligned_cols=21 Identities=19% Similarity=0.197 Sum_probs=16.1
Q ss_pred CCCCCCCCeeEEeec-cceecc
Q 033136 79 PIGPKRGAKVKILRR-ESYWYN 99 (126)
Q Consensus 79 pigp~RGskVrIlR~-ESYWyn 99 (126)
....++|+.|.|+++ ++-|+.
T Consensus 24 eLs~~~Gd~i~v~~~~~~gWw~ 45 (67)
T 2eyx_A 24 ALALEVGELVKVTKINVSGQWE 45 (67)
T ss_dssp BCCBCSSEEEEEEEECTTSEEE
T ss_pred ccccCCCCEEEEEEecCCCEEE
Confidence 567899999999987 445553
No 172
>1sem_A SEM-5; SRC-homology 3 (SH3) domain, peptide-binding protein; 2.00A {Caenorhabditis elegans} SCOP: b.34.2.1 PDB: 2sem_A 3sem_A 1k76_A 1kfz_A
Probab=25.96 E-value=61 Score=18.21 Aligned_cols=21 Identities=19% Similarity=0.662 Sum_probs=16.0
Q ss_pred CCCCCCCCCeeEEeecc-ceec
Q 033136 78 PPIGPKRGAKVKILRRE-SYWY 98 (126)
Q Consensus 78 ppigp~RGskVrIlR~E-SYWy 98 (126)
.....++|+.|.|+.+. +-|+
T Consensus 17 ~eLs~~~Gd~i~v~~~~~~~Ww 38 (58)
T 1sem_A 17 GELAFKRGDVITLINKDDPNWW 38 (58)
T ss_dssp TBCCBCTTCEEEEEECSSSSEE
T ss_pred CCcCCCCCCEEEEEEecCCCEE
Confidence 35778999999999974 3454
No 173
>3rnj_A Brain-specific angiogenesis inhibitor 1-associate 2; structural genomics, structural genomics consortium, SGC, BE barrel; HET: EDT; 1.50A {Homo sapiens} SCOP: b.34.2.1
Probab=25.79 E-value=55 Score=19.12 Aligned_cols=20 Identities=20% Similarity=0.365 Sum_probs=15.3
Q ss_pred CCCCCCCeeEEeec--cceecc
Q 033136 80 IGPKRGAKVKILRR--ESYWYN 99 (126)
Q Consensus 80 igp~RGskVrIlR~--ESYWyn 99 (126)
...++|+.+.|+++ ++-|+.
T Consensus 25 Lsf~~Gd~i~v~~~~~~~gW~~ 46 (67)
T 3rnj_A 25 LSFKEGDLITLLVPEARDGWHY 46 (67)
T ss_dssp CCBCTTCEEEECSSSCBTTEEE
T ss_pred ccCCCCCEEEEeeccCCCCCEE
Confidence 78899999999964 445554
No 174
>2j05_A RAS GTPase-activating protein 1; GTPase activation, SH3 domain, SH2 domain, SRC homology 3, RAS signaling pathway, proto- oncogene, phosphorylation; 1.5A {Homo sapiens} PDB: 2j06_A
Probab=25.71 E-value=63 Score=18.79 Aligned_cols=21 Identities=19% Similarity=0.256 Sum_probs=16.2
Q ss_pred CCCCCCCCeeEEeec-cceecc
Q 033136 79 PIGPKRGAKVKILRR-ESYWYN 99 (126)
Q Consensus 79 pigp~RGskVrIlR~-ESYWyn 99 (126)
....++|+.+.|+.+ ++-|+.
T Consensus 22 eLs~~~Gd~i~v~~~~~~gW~~ 43 (65)
T 2j05_A 22 EISFLKGDMFIVHNELEDGWMW 43 (65)
T ss_dssp BCCBCTTCEEEEEEECTTSEEE
T ss_pred cCcCCCCCEEEEeEecCCCEEE
Confidence 577899999999986 455553
No 175
>2kq8_A Cell WALL hydrolase; GFT protein structure, NESG, PSI, SH3 domain, structural genomics, protein structure initiative; NMR {Bacillus thuringiensis serovarkonkukian}
Probab=25.69 E-value=17 Score=22.30 Aligned_cols=19 Identities=26% Similarity=0.560 Sum_probs=16.1
Q ss_pred CCCCCCeeEEeeccceecc
Q 033136 81 GPKRGAKVKILRRESYWYN 99 (126)
Q Consensus 81 gp~RGskVrIlR~ESYWyn 99 (126)
-..+|++|+|+..+.=||+
T Consensus 27 ~l~~G~~v~v~~~~~~W~~ 45 (70)
T 2kq8_A 27 ALPQGQKVQVISENSGWSK 45 (70)
T ss_dssp CCCSSSSCCCCEEETTEEE
T ss_pred EECCCCEEEEEEecCCEEE
Confidence 3678999999998888885
No 176
>2pqh_A Spectrin alpha chain, brain; SH3 domain, chimera, , structural protein; 1.75A {Gallus gallus}
Probab=25.68 E-value=59 Score=19.87 Aligned_cols=20 Identities=20% Similarity=0.576 Sum_probs=15.5
Q ss_pred CCCCCCCCeeEEeec-cceec
Q 033136 79 PIGPKRGAKVKILRR-ESYWY 98 (126)
Q Consensus 79 pigp~RGskVrIlR~-ESYWy 98 (126)
....++|+.|.|+.+ ++-|+
T Consensus 18 eLs~~~Gd~i~v~~~~~~~Ww 38 (80)
T 2pqh_A 18 EVTMKKGDILTLLNSTNKDWW 38 (80)
T ss_dssp BCCBCTTCEEEEEECCSSSEE
T ss_pred ccCCCCCCEEEEEEecCCCEE
Confidence 577899999999997 33344
No 177
>2l0a_A STAM-1, signal transducing adapter molecule 1; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Homo sapiens}
Probab=25.53 E-value=51 Score=20.41 Aligned_cols=21 Identities=19% Similarity=0.556 Sum_probs=16.1
Q ss_pred CCCCCCCCeeEEeec-cceecc
Q 033136 79 PIGPKRGAKVKILRR-ESYWYN 99 (126)
Q Consensus 79 pigp~RGskVrIlR~-ESYWyn 99 (126)
....++|+.|.|+.+ +.-|+.
T Consensus 33 eLsf~~Gd~i~Vl~~~~~gWw~ 54 (72)
T 2l0a_A 33 ELTFKAGEIITVLDDSDPNWWK 54 (72)
T ss_dssp BCCBCTTCEEEEEEEEETTEEE
T ss_pred ccCCCCCCEEEEEEecCCCEEE
Confidence 577899999999986 345554
No 178
>2rqr_A CED-12 homolog, engulfment and cell motility protein 1, linker, D of cytokinesis protein 2; KIAA0209, KIAA0281, apoptosis, membrane, phagocytosis; NMR {Homo sapiens}
Probab=25.48 E-value=48 Score=22.37 Aligned_cols=22 Identities=27% Similarity=0.570 Sum_probs=18.0
Q ss_pred CCCCCCCCCeeEEeeccceecc
Q 033136 78 PPIGPKRGAKVKILRRESYWYN 99 (126)
Q Consensus 78 ppigp~RGskVrIlR~ESYWyn 99 (126)
.....++|+.|.|++++.=||.
T Consensus 74 ~eLsf~~Gd~i~vl~~~~gWw~ 95 (119)
T 2rqr_A 74 PQLSLQIGDVVRIQETCGDWYR 95 (119)
T ss_dssp TBCCBCTTCEEEEEEEETTEEE
T ss_pred CcccCcCCCEEEEEEcCCCEEE
Confidence 3577899999999998777764
No 179
>2eko_A Histone acetyltransferase htatip; chromo domain, histone tail, chromatin organization modifier, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=25.47 E-value=1.1e+02 Score=20.62 Aligned_cols=42 Identities=24% Similarity=0.456 Sum_probs=30.8
Q ss_pred CCCCCCeeEEee----ccceeccccceEEEEccCCceeeeeEEEEeeecC
Q 033136 81 GPKRGAKVKILR----RESYWYNGIGSVVAVDQVRLFSIFLVYVTFNHFK 126 (126)
Q Consensus 81 gp~RGskVrIlR----~ESYWyn~vGtVvsVDq~~~~~rYPVvVRF~kv~ 126 (126)
..+.|.+|.+++ .+.-||. .+|..++.... .+=..|.|...|
T Consensus 9 ~~~vG~kv~v~~~~~~~~~~~y~--AkIl~i~~~~~--~~~YyVHY~g~N 54 (87)
T 2eko_A 9 EIIEGCRLPVLRRNQDNEDEWPL--AEILSVKDISG--RKLFYVHYIDFN 54 (87)
T ss_dssp SCCTTCEEEBCEECTTCCEECCE--EEEEEECCSSS--CCCEEEEECSSC
T ss_pred cccCCCEEEEEEcccCCCCeEEE--EEEEEEEEcCC--CcEEEEEeCCCC
Confidence 467899999998 4778885 78999988644 444567776543
No 180
>1jqq_A PEX13P, peroxisomal membrane protein PAS20, PAS20P, roxin-13; compact beta-barrel of five anti-parrallel beta-strands; 2.65A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 1n5z_A
Probab=25.43 E-value=45 Score=20.81 Aligned_cols=17 Identities=24% Similarity=0.477 Sum_probs=14.6
Q ss_pred CCCCCCCCeeEEeeccc
Q 033136 79 PIGPKRGAKVKILRRES 95 (126)
Q Consensus 79 pigp~RGskVrIlR~ES 95 (126)
....++|+.|.|+.++.
T Consensus 31 eLsf~~Gd~i~v~~~~~ 47 (92)
T 1jqq_A 31 EVALKKGDLMAILSKKD 47 (92)
T ss_dssp BCCBCTTCEEEEEEEEC
T ss_pred CcCCCCCCEEEEEECCC
Confidence 57789999999999863
No 181
>3cqt_A P59-FYN, proto-oncogene tyrosine-protein kinase FYN; beta barrel, ATP-binding, developmental protein, lipoprotein, manganese, metal-binding; 1.60A {Gallus gallus} PDB: 2l2p_A
Probab=25.22 E-value=60 Score=20.07 Aligned_cols=20 Identities=30% Similarity=0.684 Sum_probs=15.8
Q ss_pred CCCCCCCCeeEEeec-cceec
Q 033136 79 PIGPKRGAKVKILRR-ESYWY 98 (126)
Q Consensus 79 pigp~RGskVrIlR~-ESYWy 98 (126)
....++|+.|.|+.+ +.-|+
T Consensus 21 eLs~~~Gd~i~vl~~~~~~Ww 41 (79)
T 3cqt_A 21 DLSFHKGEKFQILNSSEGDWW 41 (79)
T ss_dssp BCCBCTTCEEEEEECTTSSEE
T ss_pred cCCCCCCCEEEEEEecCCCeE
Confidence 577899999999975 35565
No 182
>1tg0_A BBC1 protein, myosin tail region-interacting protein MTI1; yeast, SH3 domain, structural genomics, contractIle protein; 0.97A {Saccharomyces cerevisiae} PDB: 1zuk_A 1wdx_A
Probab=25.21 E-value=68 Score=18.82 Aligned_cols=22 Identities=9% Similarity=0.359 Sum_probs=16.4
Q ss_pred CCCCCCCCCeeEEeec-cceecc
Q 033136 78 PPIGPKRGAKVKILRR-ESYWYN 99 (126)
Q Consensus 78 ppigp~RGskVrIlR~-ESYWyn 99 (126)
.....++|+.|.|+.+ ++-|+.
T Consensus 22 ~eLsf~~Gd~i~v~~~~~~~Ww~ 44 (68)
T 1tg0_A 22 DDLNFEKDQEIIVTSVEDAEWYF 44 (68)
T ss_dssp TBCCBCTTCEEEEEEECSSSEEE
T ss_pred CCCCCCCCCEEEEEEecCCCeEE
Confidence 3577899999999985 345653
No 183
>2jqo_A Hypothetical protein YOBA; OB-fold, beta barrel, structural genomics, PSI-2, protein structure initiative; NMR {Bacillus subtilis}
Probab=25.12 E-value=22 Score=25.81 Aligned_cols=12 Identities=42% Similarity=0.589 Sum_probs=10.2
Q ss_pred CCCCCCCCeeEE
Q 033136 79 PIGPKRGAKVKI 90 (126)
Q Consensus 79 pigp~RGskVrI 90 (126)
--+.++|+||||
T Consensus 68 ~~~lK~GdKIKV 79 (108)
T 2jqo_A 68 TDDLKRGEKIKV 79 (108)
T ss_dssp GGGCCTTEEEEE
T ss_pred ccccCCCCEEEE
Confidence 356899999998
No 184
>2jng_A Cullin-7, CUL-7; P53 binding domain, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Homo sapiens} SCOP: b.34.9.4 PDB: 2juf_A
Probab=25.04 E-value=91 Score=22.43 Aligned_cols=38 Identities=18% Similarity=0.177 Sum_probs=28.4
Q ss_pred CCCCCeeEEeec-cceeccccceEEEEccCCceeeeeEEEEee
Q 033136 82 PKRGAKVKILRR-ESYWYNGIGSVVAVDQVRLFSIFLVYVTFN 123 (126)
Q Consensus 82 p~RGskVrIlR~-ESYWyn~vGtVvsVDq~~~~~rYPVvVRF~ 123 (126)
++.|..||.++. |.-=..|+|.|. +|.+|. . ||-|-..
T Consensus 22 l~pGM~VR~~~dyeev~~GD~G~vl-~s~~Gl--~-~vQv~W~ 60 (105)
T 2jng_A 22 LQPGMRVRMLDDYEEISAGDEGEFR-QSNNGV--P-PVQVFWE 60 (105)
T ss_dssp CCTTCEEEECSCBTTBCTTCEEEEE-EECTTS--S-EEEEEET
T ss_pred CCCccEEeeehhhhhhccCCceeEE-ecCCCC--c-cceeeeh
Confidence 467999999986 323347889999 898885 4 8877654
No 185
>2d8h_A SH3YL1 protein; SH3 domain, hypothetical protein SH3YL1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=24.95 E-value=41 Score=20.47 Aligned_cols=16 Identities=6% Similarity=0.420 Sum_probs=14.0
Q ss_pred CCCCCCCCeeEEeecc
Q 033136 79 PIGPKRGAKVKILRRE 94 (126)
Q Consensus 79 pigp~RGskVrIlR~E 94 (126)
....++|+.|.|+.++
T Consensus 33 eLsf~~Gd~i~v~~~~ 48 (80)
T 2d8h_A 33 DLNFQAGDRITVISKT 48 (80)
T ss_dssp BCEECTTCEEEEEECC
T ss_pred eeeEcCCCEEEEeECc
Confidence 5778999999999984
No 186
>1ugv_A KIAA0621, olygophrenin-1 like protein; beta barrel, GRAF protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=24.41 E-value=40 Score=20.24 Aligned_cols=21 Identities=14% Similarity=0.292 Sum_probs=16.2
Q ss_pred CCCCCCCCeeEEeec--cceecc
Q 033136 79 PIGPKRGAKVKILRR--ESYWYN 99 (126)
Q Consensus 79 pigp~RGskVrIlR~--ESYWyn 99 (126)
....++|+.|.|+.+ +.-|+.
T Consensus 26 eLsf~~Gd~i~v~~~~~~~~Ww~ 48 (72)
T 1ugv_A 26 ELSFTAGTVFDNVHPSQEPGWLE 48 (72)
T ss_dssp BCCBCTTCEEBSCCBCSSTTEEE
T ss_pred EeCCcCCCEEEEEEecCCCCeEE
Confidence 577899999999974 556665
No 187
>1neg_A Spectrin alpha chain, brain; SH3-domain fold, five antiparallel beta sheets, structural protein; 2.30A {Gallus gallus} SCOP: b.34.2.1
Probab=24.38 E-value=60 Score=20.58 Aligned_cols=21 Identities=19% Similarity=0.561 Sum_probs=16.5
Q ss_pred CCCCCCCCeeEEeec-cceecc
Q 033136 79 PIGPKRGAKVKILRR-ESYWYN 99 (126)
Q Consensus 79 pigp~RGskVrIlR~-ESYWyn 99 (126)
....++|+.|.|+.+ +.-|+.
T Consensus 33 eLsf~~Gd~i~Vl~~~~~gWw~ 54 (83)
T 1neg_A 33 EVTMKKGDILTLLNSTNKDWWK 54 (83)
T ss_dssp BCCBCTTCEEEEEECCSSSEEE
T ss_pred ccccCCCCEEEEEEecCCCEEE
Confidence 577899999999996 445654
No 188
>2ed0_A ABL interactor 2; coiled coil, cytoskeleton, nuclear protein, phosphorylation, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=24.25 E-value=66 Score=19.55 Aligned_cols=21 Identities=19% Similarity=0.668 Sum_probs=16.2
Q ss_pred CCCCCCCCeeEEeec-cceecc
Q 033136 79 PIGPKRGAKVKILRR-ESYWYN 99 (126)
Q Consensus 79 pigp~RGskVrIlR~-ESYWyn 99 (126)
....++|+.|.|+.+ +.-|+.
T Consensus 33 eLsf~~Gd~i~v~~~~~~gWw~ 54 (78)
T 2ed0_A 33 ELSFQEGAIIYVIKKNDDGWYE 54 (78)
T ss_dssp BCCBCSSCEEEEEEECSSSEEE
T ss_pred cccccCCCEEEEEEeCCCCEEE
Confidence 577899999999987 344553
No 189
>1ng2_A Neutrophil cytosolic factor 1; P47PHOX, autoinhibited, SH3 domain, NADPH oxidase, oxidoredu activator; 1.70A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1 PDB: 1uec_A 1ov3_A 1wlp_B
Probab=24.16 E-value=58 Score=23.14 Aligned_cols=23 Identities=22% Similarity=0.481 Sum_probs=17.7
Q ss_pred CCCCCCCCCCeeEEeec-cceecc
Q 033136 77 PPPIGPKRGAKVKILRR-ESYWYN 99 (126)
Q Consensus 77 pppigp~RGskVrIlR~-ESYWyn 99 (126)
+.....++|+.|.||.+ ++-|+.
T Consensus 25 ~~eLs~~~Gd~i~vl~~~~~gWw~ 48 (193)
T 1ng2_A 25 GSEMALSTGDVVEVVEKSESGWWF 48 (193)
T ss_dssp TTCCCBCTTCEEEEEECCTTSCCE
T ss_pred CCcCCCCCCCEEEEEEecCCCeEE
Confidence 34678899999999997 555553
No 190
>2fpe_A C-JUN-amino-terminal kinase interacting protein 1; SRC-homology 3 (SH3) domain, all beta structure, signaling protein; HET: P6G; 1.75A {Rattus norvegicus} PDB: 2fpd_A*
Probab=23.93 E-value=73 Score=18.27 Aligned_cols=21 Identities=19% Similarity=0.504 Sum_probs=16.1
Q ss_pred CCCCCCCCeeEEeec-cceecc
Q 033136 79 PIGPKRGAKVKILRR-ESYWYN 99 (126)
Q Consensus 79 pigp~RGskVrIlR~-ESYWyn 99 (126)
....++|+.|.|+.+ ++-|+.
T Consensus 19 eLs~~~Gd~i~v~~~~~~~W~~ 40 (62)
T 2fpe_A 19 ELELEVDDPLLVELQAEDYWYE 40 (62)
T ss_dssp BCCBCTTCEEEEEEECTTSEEE
T ss_pred cCcCCCCCEEEEEEecCCCEEE
Confidence 567899999999875 456664
No 191
>2csq_A RIM-BP2, RIM binding protein 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=23.64 E-value=50 Score=21.06 Aligned_cols=21 Identities=14% Similarity=0.338 Sum_probs=15.6
Q ss_pred CCCCCCCCeeEEeec--cc-eecc
Q 033136 79 PIGPKRGAKVKILRR--ES-YWYN 99 (126)
Q Consensus 79 pigp~RGskVrIlR~--ES-YWyn 99 (126)
....++|+.|.||.+ +. +|+-
T Consensus 41 eLsf~~Gd~i~vl~~~~~~gWw~g 64 (97)
T 2csq_A 41 ELPFKEGQIIKVYGDKDADGFYRG 64 (97)
T ss_dssp BCCBCTTCEEEEEEEECTTCEEEE
T ss_pred ccCCCCCCEEEEEEecCCCCeEEE
Confidence 567899999999954 45 5543
No 192
>2dbk_A CRK-like protein; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=23.49 E-value=48 Score=20.70 Aligned_cols=20 Identities=20% Similarity=0.197 Sum_probs=15.8
Q ss_pred CCCCCCCCeeEEeec-cceec
Q 033136 79 PIGPKRGAKVKILRR-ESYWY 98 (126)
Q Consensus 79 pigp~RGskVrIlR~-ESYWy 98 (126)
....++|+.|.|+.+ +.-|+
T Consensus 34 eLsf~~Gd~i~v~~~~~~~Ww 54 (88)
T 2dbk_A 34 ALALEVGDIVKVTRMNINGQW 54 (88)
T ss_dssp BCCBCTTCEEEEEEECTTSCE
T ss_pred cccCCCCCEEEEEEecCCCEE
Confidence 477899999999987 44555
No 193
>3eg3_A Proto-oncogene tyrosine-protein kinase ABL1; beta, ATP-binding, cell adhesion, cytoskeleton, LIPO magnesium, manganese, metal-binding, myristate; 1.40A {Homo sapiens} PDB: 3egu_A 3eg0_A 3eg2_A 3eg1_A 1abo_A 1abq_A 1ju5_C* 2o88_A 1bbz_A 1awo_A
Probab=23.42 E-value=77 Score=17.92 Aligned_cols=21 Identities=19% Similarity=0.561 Sum_probs=15.8
Q ss_pred CCCCCCCCeeEEeecc--ceecc
Q 033136 79 PIGPKRGAKVKILRRE--SYWYN 99 (126)
Q Consensus 79 pigp~RGskVrIlR~E--SYWyn 99 (126)
....++|+.|.|+.++ .-|+.
T Consensus 21 eLs~~~Gd~i~v~~~~~~~~W~~ 43 (63)
T 3eg3_A 21 TLSITKGEKLRVLGYNHNGEWCE 43 (63)
T ss_dssp BCCBCTTCEEEEEEECTTSSEEE
T ss_pred ccCCCCCCEEEEEEeCCCCCeEE
Confidence 4788999999999853 44553
No 194
>3h0h_A Proto-oncogene tyrosine-protein kinase FYN; beta barrel, transferase; HET: PG4; 1.76A {Homo sapiens} SCOP: b.34.2.1 PDB: 3h0i_A 3h0f_A*
Probab=23.40 E-value=75 Score=18.66 Aligned_cols=21 Identities=24% Similarity=0.612 Sum_probs=16.2
Q ss_pred CCCCCCCCeeEEeecc-ceecc
Q 033136 79 PIGPKRGAKVKILRRE-SYWYN 99 (126)
Q Consensus 79 pigp~RGskVrIlR~E-SYWyn 99 (126)
....++|+.|.|+.++ .-|+.
T Consensus 31 eLs~~~Gd~i~v~~~~~~~Ww~ 52 (73)
T 3h0h_A 31 DLSFHKGEKFQILNSSEGDWWE 52 (73)
T ss_dssp BCCBCTTCEEEEEECSSSSEEE
T ss_pred cceEeCCCEEEEEEecCCCeEE
Confidence 5778999999999863 45553
No 195
>1u5u_A Allene oxide synthase-lipoxygenase protein; catalase, heme, eicosanoid, fusion PR lyase; HET: HEM; 2.00A {Plexaura homomalla} SCOP: e.5.1.2
Probab=23.18 E-value=46 Score=27.48 Aligned_cols=11 Identities=9% Similarity=0.208 Sum_probs=9.8
Q ss_pred eeeEEEEeeec
Q 033136 115 IFLVYVTFNHF 125 (126)
Q Consensus 115 rYPVvVRF~kv 125 (126)
+|||+|||.++
T Consensus 96 ~tpv~vRFSt~ 106 (374)
T 1u5u_A 96 TFPARLRHANL 106 (374)
T ss_dssp EEEEEEEEEBS
T ss_pred eeeEEEEecCC
Confidence 89999999875
No 196
>2e5k_A Suppressor of T-cell receptor signaling 1; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=23.09 E-value=62 Score=20.29 Aligned_cols=15 Identities=7% Similarity=-0.060 Sum_probs=13.4
Q ss_pred CCCCCCCCeeEEeec
Q 033136 79 PIGPKRGAKVKILRR 93 (126)
Q Consensus 79 pigp~RGskVrIlR~ 93 (126)
....++|+.|.|+.+
T Consensus 32 eLs~~~Gd~i~v~~~ 46 (94)
T 2e5k_A 32 ELELVPGDFIFMSPM 46 (94)
T ss_dssp BCCBCTTCEEEECGG
T ss_pred CcCCCCCCEEEEEEC
Confidence 477899999999998
No 197
>2lcc_A AT-rich interactive domain-containing protein 4A; chromobarrel domain, RBBP1, transcription; NMR {Homo sapiens}
Probab=22.70 E-value=1.5e+02 Score=19.13 Aligned_cols=41 Identities=20% Similarity=0.175 Sum_probs=28.8
Q ss_pred CCCCCCeeEEeecc---ceeccccceEEEEccCCceeeeeEEEEeeec
Q 033136 81 GPKRGAKVKILRRE---SYWYNGIGSVVAVDQVRLFSIFLVYVTFNHF 125 (126)
Q Consensus 81 gp~RGskVrIlR~E---SYWyn~vGtVvsVDq~~~~~rYPVvVRF~kv 125 (126)
-...|.+|.+.+.. .=||. .+|..|+..++ .+=..|.|...
T Consensus 5 ~~~vGekV~~~~~d~k~~~~y~--AkIl~i~~~~~--~~~Y~VHY~gw 48 (76)
T 2lcc_A 5 PCLTGTKVKVKYGRGKTQKIYE--ASIKSTEIDDG--EVLYLVHYYGW 48 (76)
T ss_dssp CSSTTCEEEEEEEETTEEEEEE--EEEEEEEEETT--EEEEEEEETTS
T ss_pred ccCCCCEEEEEeCCCCCCCEEE--EEEEEEEccCC--ceEEEEEeCCc
Confidence 35789999999864 35775 78888887655 44456777644
No 198
>2egc_A SH3 and PX domain-containing protein 2A; SH3 domain, KIAA0418 protein, SH3MD1, SH3 multiple domains 1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=22.55 E-value=56 Score=19.78 Aligned_cols=17 Identities=24% Similarity=0.532 Sum_probs=14.3
Q ss_pred CCCCCCCCeeEEeeccc
Q 033136 79 PIGPKRGAKVKILRRES 95 (126)
Q Consensus 79 pigp~RGskVrIlR~ES 95 (126)
....++|+.|.||.++.
T Consensus 25 eLs~~~Gd~i~vl~~~~ 41 (75)
T 2egc_A 25 TAGFQEGVSMEVLERNP 41 (75)
T ss_dssp SCCBCTTCEEEECEECT
T ss_pred cCCCCCCCEEEEEEcCC
Confidence 57789999999998744
No 199
>2c4i_A Avidin; biotin, glycoprotein, signalor; HET: BTN; 1.95A {Gallus gallus}
Probab=22.53 E-value=44 Score=27.47 Aligned_cols=16 Identities=25% Similarity=0.563 Sum_probs=13.6
Q ss_pred ccceeccccceEEEEc
Q 033136 93 RESYWYNGIGSVVAVD 108 (126)
Q Consensus 93 ~ESYWyn~vGtVvsVD 108 (126)
..--||||.|+...|.
T Consensus 82 ltGtW~NqLGStMtIt 97 (271)
T 2c4i_A 82 LTGKWTNDLGSNMTIG 97 (271)
T ss_dssp CCEEEEETTSCEEEEC
T ss_pred CceEEEccCCCEEEEE
Confidence 3567999999999887
No 200
>2biv_A SCML2 protein, sex COMB on midleg-like protein 2; MBT, malignant brain tumor, transcription factor; 1.7A {Homo sapiens} SCOP: b.34.9.3 b.34.9.3 PDB: 1oi1_A 2vyt_A* 2p0k_A
Probab=22.42 E-value=1.5e+02 Score=22.96 Aligned_cols=43 Identities=23% Similarity=0.286 Sum_probs=28.4
Q ss_pred CCCCCCCCCCCeeEEeeccceeccccceEEEEccCCceeeeeEEEEeee
Q 033136 76 KPPPIGPKRGAKVKILRRESYWYNGIGSVVAVDQVRLFSIFLVYVTFNH 124 (126)
Q Consensus 76 kpppigp~RGskVrIlR~ESYWyn~vGtVvsVDq~~~~~rYPVvVRF~k 124 (126)
.++.-+.+.|.|+..+-+-.=..--+.||+.|+.. | +.|+||.
T Consensus 166 ~~~~~~F~~GmKLEavD~~~p~~icvATV~~v~g~----r--l~v~fDg 208 (243)
T 2biv_A 166 KPPLNNFKVGMKLEAIDKKNPYLICPATIGDVKGD----E--VHITFDG 208 (243)
T ss_dssp CCSSCCCCTTCEEEEECTTSTTCEEEEEEEEEETT----E--EEEEETT
T ss_pred CCccccccCCCEEEEEccCCCCeEEEEEEEEecCC----E--EEEEECC
Confidence 44556999999999985443222337788888633 3 3588875
No 201
>2yt6_A Adult MALE urinary bladder cDNA, riken FULL- length enriched library, clone:9530076O17...; SH3_1 domain; NMR {Mus musculus}
Probab=22.40 E-value=77 Score=20.14 Aligned_cols=21 Identities=24% Similarity=0.665 Sum_probs=16.4
Q ss_pred CCCCCCCCCeeEEeec-cceec
Q 033136 78 PPIGPKRGAKVKILRR-ESYWY 98 (126)
Q Consensus 78 ppigp~RGskVrIlR~-ESYWy 98 (126)
.....++|+.|.|+.+ +.-|+
T Consensus 42 ~eLs~~~Gd~i~v~~~~~~~Ww 63 (109)
T 2yt6_A 42 EDLSFKKGERFQIINNTEGDWW 63 (109)
T ss_dssp TSCCCCTTCEEEEEECSCTTCE
T ss_pred CccCCCCCCEEEEEEccCCCcE
Confidence 3677899999999975 55565
No 202
>2dmo_A Neutrophil cytosol factor 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=22.29 E-value=81 Score=18.55 Aligned_cols=20 Identities=20% Similarity=0.406 Sum_probs=15.9
Q ss_pred CCCCCCCCeeEEeecc-ceec
Q 033136 79 PIGPKRGAKVKILRRE-SYWY 98 (126)
Q Consensus 79 pigp~RGskVrIlR~E-SYWy 98 (126)
....++|+.|.|+.+. +-|+
T Consensus 23 eLs~~~Gd~i~v~~~~~~~Ww 43 (68)
T 2dmo_A 23 ELQVMPGNIVFVLKKGNDNWA 43 (68)
T ss_dssp SCCCCTTCEEEECEECSSSCE
T ss_pred CCCCCCCCEEEEEEeCCCCEE
Confidence 5778999999999864 4566
No 203
>3bbo_R Ribosomal protein L19; large ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea}
Probab=22.17 E-value=15 Score=29.72 Aligned_cols=11 Identities=36% Similarity=0.450 Sum_probs=0.0
Q ss_pred eeEEEEecccc
Q 033136 44 FRLVVRASEEA 54 (126)
Q Consensus 44 ~rlvvRA~e~~ 54 (126)
.+.||||+.++
T Consensus 72 ~~f~~r~~~~~ 82 (233)
T 3bbo_R 72 NSFVVRSEAED 82 (233)
T ss_dssp -----------
T ss_pred cceeEeecccc
Confidence 45678987544
No 204
>3mea_A SAGA-associated factor 29 homolog; structural genomics consortium, SGC, nucleus, transcription, transcription regulation, chromosomal protein, DNA-binding; HET: M3L; 1.26A {Homo sapiens} PDB: 3meu_A* 3met_A* 3me9_A* 3mev_A* 3lx7_A 3mew_A
Probab=22.12 E-value=1.9e+02 Score=21.87 Aligned_cols=38 Identities=18% Similarity=0.246 Sum_probs=28.3
Q ss_pred CCCCCCCCCCeeEEeec----cceeccccceEEEEccCCceeeeeE
Q 033136 77 PPPIGPKRGAKVKILRR----ESYWYNGIGSVVAVDQVRLFSIFLV 118 (126)
Q Consensus 77 pppigp~RGskVrIlR~----ESYWyn~vGtVvsVDq~~~~~rYPV 118 (126)
.+-.-++.|++|-.+.+ |.=|.. +.|+.++.++. +|=|
T Consensus 40 ~~~~~~~~G~~VAakvk~~~~~~~WIL--a~Vv~~~~~~~--rYeV 81 (180)
T 3mea_A 40 SGDYVARPGDKVAARVKAVDGDEQWIL--AEVVSYSHATN--KYEV 81 (180)
T ss_dssp CTTCCCCTTCEEEEEEECCC--EEEEE--EEEEEEETTTT--EEEE
T ss_pred CCCcccCCCCEEEEEcCCCCCCccEEE--EEEEEEcCCCC--EEEE
Confidence 34456788999988875 567985 78999998765 8855
No 205
>1yn8_A NBP2, NAP1-binding protein 2; SH3 domain, unknown function; 1.70A {Saccharomyces cerevisiae}
Probab=22.06 E-value=75 Score=17.81 Aligned_cols=18 Identities=17% Similarity=0.113 Sum_probs=14.5
Q ss_pred CCCCCCCCCeeEEeeccc
Q 033136 78 PPIGPKRGAKVKILRRES 95 (126)
Q Consensus 78 ppigp~RGskVrIlR~ES 95 (126)
.....++|+.|.|+.+..
T Consensus 16 ~eLs~~~Gd~i~v~~~~~ 33 (59)
T 1yn8_A 16 NELRLAEGDIVFISYKHG 33 (59)
T ss_dssp TBCCBCTTCEEEEEEEEE
T ss_pred CCcCCCCCCEEEEEEcCC
Confidence 357789999999998643
No 206
>2i0n_A Class VII unconventional myosin; beta-sheet loop, structural protein; NMR {Dictyostelium discoideum}
Probab=21.99 E-value=66 Score=19.70 Aligned_cols=16 Identities=19% Similarity=0.191 Sum_probs=13.8
Q ss_pred CCCCCCCCeeEEeecc
Q 033136 79 PIGPKRGAKVKILRRE 94 (126)
Q Consensus 79 pigp~RGskVrIlR~E 94 (126)
....++|+.|.|+.++
T Consensus 26 eLsf~~Gd~i~v~~~~ 41 (80)
T 2i0n_A 26 LLPFKRNDIITITFKD 41 (80)
T ss_dssp SCCBCSSEEEEEEEES
T ss_pred CcCCCCCCEEEEEEec
Confidence 4778999999999973
No 207
>2o2o_A SH3-domain kinase-binding protein 1; CIN85, protein binding; NMR {Homo sapiens}
Probab=21.89 E-value=67 Score=20.72 Aligned_cols=22 Identities=23% Similarity=0.588 Sum_probs=17.3
Q ss_pred CCCCCCCCeeEEeec-cceeccc
Q 033136 79 PIGPKRGAKVKILRR-ESYWYNG 100 (126)
Q Consensus 79 pigp~RGskVrIlR~-ESYWyn~ 100 (126)
....++|+.|.|+.+ ++-|+..
T Consensus 34 eLsf~~Gd~i~V~~~~~~gWw~g 56 (92)
T 2o2o_A 34 ELELKVGDIIEVVGEVEEGWWEG 56 (92)
T ss_dssp CCCBCSSCEEECCCGGGSSCBCC
T ss_pred cccccCCCEEEEeEecCCCEEEE
Confidence 577899999999987 5666643
No 208
>2diq_A Tudor and KH domain-containing protein; tudor domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.34.9.1
Probab=21.70 E-value=1e+02 Score=20.12 Aligned_cols=39 Identities=15% Similarity=0.183 Sum_probs=25.6
Q ss_pred CCCCCCCCCeeEEeec-cceeccccceEEEEccCCceeeeeEEEEee
Q 033136 78 PPIGPKRGAKVKILRR-ESYWYNGIGSVVAVDQVRLFSIFLVYVTFN 123 (126)
Q Consensus 78 ppigp~RGskVrIlR~-ESYWyn~vGtVvsVDq~~~~~rYPVvVRF~ 123 (126)
++..|+.|+.+-..-. +.-||. +.|..++.++. +.|+|-
T Consensus 29 ~~~~~~~G~~c~a~~~~d~~wyR--A~V~~~~~~~~-----~~V~fv 68 (110)
T 2diq_A 29 EDLTVHVGDIVAAPLPTNGSWYR--ARVLGTLENGN-----LDLYFV 68 (110)
T ss_dssp CCCCCCTTCEEEECCTTTCSCEE--EEECCCCSSSC-----EEEEET
T ss_pred CCCCCCCCCEEEEEECCCCeEEE--EEEEEECCCCe-----EEEEEE
Confidence 3456789999877654 467886 55777766542 455553
No 209
>4ag1_C Fynomer; hydrolase-de novo protein complex, inhibitor, serine proteas; 1.40A {Synthetic construct} PDB: 4afz_C 4ag2_C* 4afq_C* 4afs_C 4afu_C 1azg_B 1nyf_A 1nyg_A 1a0n_B 3ua7_A 3ua6_A 1fyn_A 1m27_C* 1shf_A 1zbj_A 1efn_A 1avz_C 1nlo_C* 1nlp_C* 1qwe_A ...
Probab=21.37 E-value=65 Score=20.14 Aligned_cols=21 Identities=24% Similarity=0.550 Sum_probs=16.6
Q ss_pred CCCCCCCCeeEEeecc-ceecc
Q 033136 79 PIGPKRGAKVKILRRE-SYWYN 99 (126)
Q Consensus 79 pigp~RGskVrIlR~E-SYWyn 99 (126)
....++|+.|.|+.++ +-|+.
T Consensus 22 eLsf~~Gd~i~vl~~~~~~Ww~ 43 (84)
T 4ag1_C 22 DLSFHKGEKFQILEFGPGDWWE 43 (84)
T ss_dssp BCCBCTTCEEEEEECCSSSEEE
T ss_pred cccccCCCEEEEEEecCCCeEE
Confidence 5788999999999874 55653
No 210
>1dj7_B Ferredoxin thioredoxin reductase: variable chain; 4Fe-4S cluster binding fold with CXCX16CXCX8CXC binding MOTI electron transport; 1.60A {Synechocystis SP} SCOP: b.34.4.3 PDB: 2pu9_B 2pvo_B 2puo_B 2puk_B 2pvd_B 2pvg_B
Probab=20.92 E-value=79 Score=21.53 Aligned_cols=41 Identities=24% Similarity=0.396 Sum_probs=24.7
Q ss_pred CCCCeeEEe-----------eccceeccc-cceEEEEcc----CCceeeeeEEEEee
Q 033136 83 KRGAKVKIL-----------RRESYWYNG-IGSVVAVDQ----VRLFSIFLVYVTFN 123 (126)
Q Consensus 83 ~RGskVrIl-----------R~ESYWyn~-vGtVvsVDq----~~~~~rYPVvVRF~ 123 (126)
+.|++||+. |.+.+=.++ -|+|.++=. ..+--.||+.|.|+
T Consensus 2 k~GdrVrV~~sv~Vyh~P~~r~~~fDl~GmEGeV~~~v~~wkGr~ISanlP~~V~F~ 58 (75)
T 1dj7_B 2 NVGDRVRVTSSVVVYHHPEHKKTAFDLQGMEGEVAAVLTEWQGRPISANLPVLVKFE 58 (75)
T ss_dssp CTTCEEEECSCCEESCCTTSTTSCEECTTCEEEEEEECSEETTEECCCSSCEEEEET
T ss_pred CCCCEEEEcccEEEEeCCccCCCCcccccCEEEEEEEEeeccCcEecCCCCEEEEEe
Confidence 568888885 333333322 377777642 12223699999998
No 211
>3pnw_C Tudor domain-containing protein 3; FAB, structural genomics consortium, antibody, SGC, protein immune system complex; 2.05A {Homo sapiens}
Probab=20.57 E-value=1.8e+02 Score=18.61 Aligned_cols=37 Identities=22% Similarity=0.244 Sum_probs=27.3
Q ss_pred CCCCCCeeEEee-ccceeccccceEEEEccCCceeeeeEEEEee
Q 033136 81 GPKRGAKVKILR-RESYWYNGIGSVVAVDQVRLFSIFLVYVTFN 123 (126)
Q Consensus 81 gp~RGskVrIlR-~ESYWyn~vGtVvsVDq~~~~~rYPVvVRF~ 123 (126)
.++.|+.+.-+= ...-||. ++|.+|+.++. . +.|.|.
T Consensus 17 ~~kvGd~C~A~ys~Dg~wYR--A~I~~i~~~~~--~--~~V~fv 54 (77)
T 3pnw_C 17 MWKPGDECFALYWEDNKFYR--AEVEALHSSGM--T--AVVKFI 54 (77)
T ss_dssp TCCTTCEEEEEETTTTEEEE--EEEEEECTTSS--E--EEEEET
T ss_pred CCCcCCEEEEEECCCCCEEE--EEEEEEeCCCC--E--EEEEEE
Confidence 478999998875 4667997 68999988754 2 356664
No 212
>1nz9_A Transcription antitermination protein NUSG; transcription elongation, riken structural genomics/proteomics initiative, RSGI; NMR {Thermus thermophilus} SCOP: b.34.5.4
Probab=20.55 E-value=1.4e+02 Score=17.53 Aligned_cols=30 Identities=17% Similarity=0.386 Sum_probs=23.9
Q ss_pred CCCCCCCeeEEeeccceeccccceEEEEccCC
Q 033136 80 IGPKRGAKVKILRRESYWYNGIGSVVAVDQVR 111 (126)
Q Consensus 80 igp~RGskVrIlR~ESYWyn~vGtVvsVDq~~ 111 (126)
+-.+.|++|+|++- =|-+-.|+|..||...
T Consensus 3 ~~~~~Gd~V~V~~G--pf~g~~g~v~~v~~~k 32 (58)
T 1nz9_A 3 VAFREGDQVRVVSG--PFADFTGTVTEINPER 32 (58)
T ss_dssp CSCCTTCEEEECSG--GGTTCEEEEEEEETTT
T ss_pred cccCCCCEEEEeec--CCCCcEEEEEEEcCCC
Confidence 34678999999875 4777889999998763
No 213
>1wxu_A Peroxisomal biogenesis factor 13; SH3 domain, PEX13, protein-protein interaction, structural genomics; NMR {Mus musculus}
Probab=20.52 E-value=55 Score=20.55 Aligned_cols=17 Identities=18% Similarity=0.307 Sum_probs=14.8
Q ss_pred CCCCCCCCeeEEeeccc
Q 033136 79 PIGPKRGAKVKILRRES 95 (126)
Q Consensus 79 pigp~RGskVrIlR~ES 95 (126)
....++|+.|.|++++.
T Consensus 33 eLsf~~Gd~i~v~~~~~ 49 (93)
T 1wxu_A 33 EISFRAGDMLNLALKEQ 49 (93)
T ss_dssp BCCBCSSCBCEECCTTT
T ss_pred ccCcCCCCEEEEEECCC
Confidence 57889999999999864
No 214
>1x6g_A Megakaryocyte-associated tyrosine-protein kinase; MATK, CTK, HYL, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.21 E-value=1e+02 Score=18.90 Aligned_cols=21 Identities=29% Similarity=0.613 Sum_probs=16.2
Q ss_pred CCCCCCCCeeEEeecc-c-eecc
Q 033136 79 PIGPKRGAKVKILRRE-S-YWYN 99 (126)
Q Consensus 79 pigp~RGskVrIlR~E-S-YWyn 99 (126)
....++|+.|.|+.++ . -|+.
T Consensus 33 eLsf~~Gd~i~v~~~~~~~~Ww~ 55 (81)
T 1x6g_A 33 ELAFRKGDVVTILEACENKSWYR 55 (81)
T ss_dssp CCCBCTTCEEEEEECCCSSSEEE
T ss_pred CCCCCCCCEEEEEeccCCCCeEE
Confidence 5778999999999963 2 5654
No 215
>1gbq_A GRB2; complex (signal transduction/peptide), SH3 domain; NMR {Mus musculus} SCOP: b.34.2.1 PDB: 1gbr_A 2gbq_A 3gbq_A 4gbq_A
Probab=20.04 E-value=70 Score=19.23 Aligned_cols=16 Identities=38% Similarity=0.571 Sum_probs=14.2
Q ss_pred CCCCCCCCeeEEeecc
Q 033136 79 PIGPKRGAKVKILRRE 94 (126)
Q Consensus 79 pigp~RGskVrIlR~E 94 (126)
....++|+.|.|++++
T Consensus 25 eLs~~~Gd~i~v~~~~ 40 (74)
T 1gbq_A 25 ELSFKRGDILKVLNEE 40 (74)
T ss_dssp BCCBCTTCEEECCBCS
T ss_pred eeeEcCCCEEEEeEec
Confidence 5778999999999976
Done!