BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033141
(126 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q7NBW0|DNAJ_MYCGA Chaperone protein DnaJ OS=Mycoplasma gallisepticum (strain R(low /
passage 15 / clone 2)) GN=dnaJ PE=3 SV=2
Length = 391
Score = 35.4 bits (80), Expect = 0.11, Method: Composition-based stats.
Identities = 25/80 (31%), Positives = 34/80 (42%), Gaps = 12/80 (15%)
Query: 43 VNRLHSIRVK-AAANNGNTKR----NSVVCADCDGNGA-----VLCSQCKGSG--VNAVD 90
VN +H I++ A NG K V C DC+G+G+ + CS C G G V
Sbjct: 129 VNLVHEIKINFLEAANGCIKNVKYTRQVTCPDCNGSGSADGDVITCSDCNGEGFLVEQRR 188
Query: 91 FFGGQFKAGDSCWLCGQSSQ 110
G F+ +C C Q
Sbjct: 189 TLLGMFQTKKTCPSCKGEGQ 208
>sp|Q74IT7|DNAJ_LACJO Chaperone protein DnaJ OS=Lactobacillus johnsonii (strain CNCM
I-12250 / La1 / NCC 533) GN=dnaJ PE=3 SV=1
Length = 388
Score = 32.7 bits (73), Expect = 0.67, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 12/76 (15%)
Query: 20 RAHVDSSSDSKDHLINDTPKTTKVNRLHSIRVKAAANNGNTKRNSVVCADCDGNGA---- 75
R+ VD ++ K D T ++ + +I+ K T S VC CDG+GA
Sbjct: 117 RSRVDPTAPQKGQ---DLDYTMTIDFMDAIKGK---KTDITYTRSEVCPTCDGSGAEKGT 170
Query: 76 --VLCSQCKGSGVNAV 89
+ C +C GSGV V
Sbjct: 171 HPITCDKCHGSGVMTV 186
>sp|Q218N7|PURQ_RHOPB Phosphoribosylformylglycinamidine synthase 1 OS=Rhodopseudomonas
palustris (strain BisB18) GN=purQ PE=3 SV=1
Length = 233
Score = 32.7 bits (73), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 23/51 (45%)
Query: 35 NDTPKTTKVNRLHSIRVKAAANNGNTKRNSVVCADCDGNGAVLCSQCKGSG 85
+DTP T N IRV A GN + + +G+G VL C SG
Sbjct: 123 SDTPFTRGYNAGQVIRVPVAHGEGNYEADEETLQRLEGDGRVLYRYCSASG 173
>sp|Q89IB6|PURQ_BRAJA Phosphoribosylformylglycinamidine synthase 1 OS=Bradyrhizobium
japonicum (strain USDA 110) GN=purQ PE=3 SV=1
Length = 233
Score = 32.3 bits (72), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 22/52 (42%)
Query: 35 NDTPKTTKVNRLHSIRVKAAANNGNTKRNSVVCADCDGNGAVLCSQCKGSGV 86
+DTP T N IRV A GN + + +G G VL C GV
Sbjct: 123 SDTPFTRGYNAGQVIRVPVAHGEGNYEADEETIQRLEGEGRVLYRYCSAEGV 174
>sp|B1ZUS0|DNAJ_OPITP Chaperone protein DnaJ OS=Opitutus terrae (strain DSM 11246 /
PB90-1) GN=dnaJ PE=3 SV=1
Length = 382
Score = 32.3 bits (72), Expect = 0.89, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 23/51 (45%), Gaps = 8/51 (15%)
Query: 62 RNSVVCADCDGNGA------VLCSQCKGSGVNAVDFFGGQFKAGDSCWLCG 106
R V C CDG+GA V C C+G+G V GG +C CG
Sbjct: 154 RKLVACERCDGSGAEPGSKRVTCPTCRGAG--QVRRSGGIITFTQTCPTCG 202
>sp|Q9HHB8|DNAJ_HALMT Chaperone protein DnaJ OS=Haloferax mediterranei (strain ATCC 33500
/ DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4)
GN=dnaJ PE=3 SV=1
Length = 384
Score = 32.3 bits (72), Expect = 0.92, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 12/64 (18%)
Query: 60 TKRNSVVCADCDGNG------AVLCSQCKGSG----VNAVDFFGGQFKAGDSCWLCGQSS 109
T R VC +CDG G CS+C GSG V F G+ + +C CG
Sbjct: 153 TIRRREVCPECDGEGHPADADVNTCSECNGSGQQTTVQQTPF--GRVQQTTTCRACGGEG 210
Query: 110 QHFS 113
+ +S
Sbjct: 211 KTYS 214
>sp|Q8GSJ6|LQY1_ARATH Protein disulfide-isomerase LQY1 OS=Arabidopsis thaliana GN=LQY1
PE=1 SV=1
Length = 154
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 20/34 (58%)
Query: 67 CADCDGNGAVLCSQCKGSGVNAVDFFGGQFKAGD 100
C +CDG G++ C+ C+GSGV +FK D
Sbjct: 121 CINCDGAGSLTCTTCQGSGVQPRYLDRREFKDDD 154
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 21/40 (52%)
Query: 56 NNGNTKRNSVVCADCDGNGAVLCSQCKGSGVNAVDFFGGQ 95
+N + N+ C C+G GA C C GSG V+ GG+
Sbjct: 76 DNAAKRENTQPCFPCNGTGAQKCRLCVGSGNVTVELGGGE 115
>sp|Q044A8|DNAJ_LACGA Chaperone protein DnaJ OS=Lactobacillus gasseri (strain ATCC 33323
/ DSM 20243) GN=dnaJ PE=3 SV=1
Length = 388
Score = 31.6 bits (70), Expect = 1.4, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 12/76 (15%)
Query: 20 RAHVDSSSDSKDHLINDTPKTTKVNRLHSIRVKAAANNGNTKRNSVVCADCDGNGA---- 75
R+ VD ++ K D T ++ + +I+ K T S VC CDG+GA
Sbjct: 117 RSRVDPTAPQKGQ---DLDYTMTIDFMDAIKGK---KTDITYTRSEVCPTCDGSGAEKGT 170
Query: 76 --VLCSQCKGSGVNAV 89
+ C +C G+GV V
Sbjct: 171 HPITCDKCHGTGVMTV 186
>sp|B3QPW8|DNAJ_CHLP8 Chaperone protein DnaJ OS=Chlorobaculum parvum (strain NCIB 8327)
GN=dnaJ PE=3 SV=1
Length = 401
Score = 31.6 bits (70), Expect = 1.7, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 7/56 (12%)
Query: 62 RNSVVCADCDGNGAV-----LCSQCKGSGV--NAVDFFGGQFKAGDSCWLCGQSSQ 110
+ VVC++C+G G+ C C GSG A GQF +C CG Q
Sbjct: 165 KKQVVCSECNGTGSKSGKTETCQTCHGSGEVRQASKTMFGQFVNIVACPTCGGEGQ 220
>sp|Q2YT48|DNAJ_STAAB Chaperone protein DnaJ OS=Staphylococcus aureus (strain bovine
RF122 / ET3-1) GN=dnaJ PE=3 SV=1
Length = 379
Score = 31.2 bits (69), Expect = 2.0, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 28/67 (41%), Gaps = 12/67 (17%)
Query: 58 GNTK----RNSVVCADCDGNGA------VLCSQCKGSGVNAVD--FFGGQFKAGDSCWLC 105
G TK R V C C G+GA CS C G+G AV+ G+ + C C
Sbjct: 136 GTTKEISIRKDVTCETCHGDGAKPGTSKKTCSYCNGAGHVAVEQNTILGRVRTEQVCPKC 195
Query: 106 GQSSQHF 112
S Q F
Sbjct: 196 NGSGQEF 202
>sp|P45555|DNAJ_STAAU Chaperone protein DnaJ OS=Staphylococcus aureus GN=dnaJ PE=3 SV=1
Length = 379
Score = 31.2 bits (69), Expect = 2.1, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 28/67 (41%), Gaps = 12/67 (17%)
Query: 58 GNTK----RNSVVCADCDGNGA------VLCSQCKGSGVNAVD--FFGGQFKAGDSCWLC 105
G TK R V C C G+GA CS C G+G AV+ G+ + C C
Sbjct: 136 GTTKEISIRKDVTCETCHGDGAKPGTSKKTCSYCNGAGHVAVEQNTILGRVRTEQVCPKC 195
Query: 106 GQSSQHF 112
S Q F
Sbjct: 196 NGSGQEF 202
>sp|Q6GGC1|DNAJ_STAAR Chaperone protein DnaJ OS=Staphylococcus aureus (strain MRSA252)
GN=dnaJ PE=3 SV=1
Length = 379
Score = 31.2 bits (69), Expect = 2.1, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 28/67 (41%), Gaps = 12/67 (17%)
Query: 58 GNTK----RNSVVCADCDGNGA------VLCSQCKGSGVNAVD--FFGGQFKAGDSCWLC 105
G TK R V C C G+GA CS C G+G AV+ G+ + C C
Sbjct: 136 GTTKEISIRKDVTCETCHGDGAKPGTSKKTCSYCNGAGHVAVEQNTILGRVRTEQVCPKC 195
Query: 106 GQSSQHF 112
S Q F
Sbjct: 196 NGSGQEF 202
>sp|P63972|DNAJ_STAAW Chaperone protein DnaJ OS=Staphylococcus aureus (strain MW2)
GN=dnaJ PE=3 SV=1
Length = 379
Score = 31.2 bits (69), Expect = 2.1, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 28/67 (41%), Gaps = 12/67 (17%)
Query: 58 GNTK----RNSVVCADCDGNGA------VLCSQCKGSGVNAVD--FFGGQFKAGDSCWLC 105
G TK R V C C G+GA CS C G+G AV+ G+ + C C
Sbjct: 136 GTTKEISIRKDVTCETCHGDGAKPGTSKKTCSYCNGAGHVAVEQNTILGRVRTEQVCPKC 195
Query: 106 GQSSQHF 112
S Q F
Sbjct: 196 NGSGQEF 202
>sp|A8Z4B8|DNAJ_STAAT Chaperone protein DnaJ OS=Staphylococcus aureus (strain USA300 /
TCH1516) GN=dnaJ PE=3 SV=1
Length = 379
Score = 31.2 bits (69), Expect = 2.1, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 28/67 (41%), Gaps = 12/67 (17%)
Query: 58 GNTK----RNSVVCADCDGNGA------VLCSQCKGSGVNAVD--FFGGQFKAGDSCWLC 105
G TK R V C C G+GA CS C G+G AV+ G+ + C C
Sbjct: 136 GTTKEISIRKDVTCETCHGDGAKPGTSKKTCSYCNGAGHVAVEQNTILGRVRTEQVCPKC 195
Query: 106 GQSSQHF 112
S Q F
Sbjct: 196 NGSGQEF 202
>sp|Q6G8Y8|DNAJ_STAAS Chaperone protein DnaJ OS=Staphylococcus aureus (strain MSSA476)
GN=dnaJ PE=3 SV=1
Length = 379
Score = 31.2 bits (69), Expect = 2.1, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 28/67 (41%), Gaps = 12/67 (17%)
Query: 58 GNTK----RNSVVCADCDGNGA------VLCSQCKGSGVNAVD--FFGGQFKAGDSCWLC 105
G TK R V C C G+GA CS C G+G AV+ G+ + C C
Sbjct: 136 GTTKEISIRKDVTCETCHGDGAKPGTSKKTCSYCNGAGHVAVEQNTILGRVRTEQVCPKC 195
Query: 106 GQSSQHF 112
S Q F
Sbjct: 196 NGSGQEF 202
>sp|P63971|DNAJ_STAAN Chaperone protein DnaJ OS=Staphylococcus aureus (strain N315)
GN=dnaJ PE=1 SV=1
Length = 379
Score = 31.2 bits (69), Expect = 2.1, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 28/67 (41%), Gaps = 12/67 (17%)
Query: 58 GNTK----RNSVVCADCDGNGA------VLCSQCKGSGVNAVD--FFGGQFKAGDSCWLC 105
G TK R V C C G+GA CS C G+G AV+ G+ + C C
Sbjct: 136 GTTKEISIRKDVTCETCHGDGAKPGTSKKTCSYCNGAGHVAVEQNTILGRVRTEQVCPKC 195
Query: 106 GQSSQHF 112
S Q F
Sbjct: 196 NGSGQEF 202
>sp|P63970|DNAJ_STAAM Chaperone protein DnaJ OS=Staphylococcus aureus (strain Mu50 / ATCC
700699) GN=dnaJ PE=1 SV=1
Length = 379
Score = 31.2 bits (69), Expect = 2.1, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 28/67 (41%), Gaps = 12/67 (17%)
Query: 58 GNTK----RNSVVCADCDGNGA------VLCSQCKGSGVNAVD--FFGGQFKAGDSCWLC 105
G TK R V C C G+GA CS C G+G AV+ G+ + C C
Sbjct: 136 GTTKEISIRKDVTCETCHGDGAKPGTSKKTCSYCNGAGHVAVEQNTILGRVRTEQVCPKC 195
Query: 106 GQSSQHF 112
S Q F
Sbjct: 196 NGSGQEF 202
>sp|A6QHC2|DNAJ_STAAE Chaperone protein DnaJ OS=Staphylococcus aureus (strain Newman)
GN=dnaJ PE=3 SV=1
Length = 379
Score = 31.2 bits (69), Expect = 2.1, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 28/67 (41%), Gaps = 12/67 (17%)
Query: 58 GNTK----RNSVVCADCDGNGA------VLCSQCKGSGVNAVD--FFGGQFKAGDSCWLC 105
G TK R V C C G+GA CS C G+G AV+ G+ + C C
Sbjct: 136 GTTKEISIRKDVTCETCHGDGAKPGTSKKTCSYCNGAGHVAVEQNTILGRVRTEQVCPKC 195
Query: 106 GQSSQHF 112
S Q F
Sbjct: 196 NGSGQEF 202
>sp|Q5HFI1|DNAJ_STAAC Chaperone protein DnaJ OS=Staphylococcus aureus (strain COL)
GN=dnaJ PE=3 SV=1
Length = 379
Score = 31.2 bits (69), Expect = 2.1, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 28/67 (41%), Gaps = 12/67 (17%)
Query: 58 GNTK----RNSVVCADCDGNGA------VLCSQCKGSGVNAVD--FFGGQFKAGDSCWLC 105
G TK R V C C G+GA CS C G+G AV+ G+ + C C
Sbjct: 136 GTTKEISIRKDVTCETCHGDGAKPGTSKKTCSYCNGAGHVAVEQNTILGRVRTEQVCPKC 195
Query: 106 GQSSQHF 112
S Q F
Sbjct: 196 NGSGQEF 202
>sp|A5ITA7|DNAJ_STAA9 Chaperone protein DnaJ OS=Staphylococcus aureus (strain JH9)
GN=dnaJ PE=3 SV=1
Length = 379
Score = 31.2 bits (69), Expect = 2.1, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 28/67 (41%), Gaps = 12/67 (17%)
Query: 58 GNTK----RNSVVCADCDGNGA------VLCSQCKGSGVNAVD--FFGGQFKAGDSCWLC 105
G TK R V C C G+GA CS C G+G AV+ G+ + C C
Sbjct: 136 GTTKEISIRKDVTCETCHGDGAKPGTSKKTCSYCNGAGHVAVEQNTILGRVRTEQVCPKC 195
Query: 106 GQSSQHF 112
S Q F
Sbjct: 196 NGSGQEF 202
>sp|Q2FXZ3|DNAJ_STAA8 Chaperone protein DnaJ OS=Staphylococcus aureus (strain NCTC 8325)
GN=dnaJ PE=3 SV=1
Length = 379
Score = 31.2 bits (69), Expect = 2.1, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 28/67 (41%), Gaps = 12/67 (17%)
Query: 58 GNTK----RNSVVCADCDGNGA------VLCSQCKGSGVNAVD--FFGGQFKAGDSCWLC 105
G TK R V C C G+GA CS C G+G AV+ G+ + C C
Sbjct: 136 GTTKEISIRKDVTCETCHGDGAKPGTSKKTCSYCNGAGHVAVEQNTILGRVRTEQVCPKC 195
Query: 106 GQSSQHF 112
S Q F
Sbjct: 196 NGSGQEF 202
>sp|Q2FGE4|DNAJ_STAA3 Chaperone protein DnaJ OS=Staphylococcus aureus (strain USA300)
GN=dnaJ PE=3 SV=1
Length = 379
Score = 31.2 bits (69), Expect = 2.1, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 28/67 (41%), Gaps = 12/67 (17%)
Query: 58 GNTK----RNSVVCADCDGNGA------VLCSQCKGSGVNAVD--FFGGQFKAGDSCWLC 105
G TK R V C C G+GA CS C G+G AV+ G+ + C C
Sbjct: 136 GTTKEISIRKDVTCETCHGDGAKPGTSKKTCSYCNGAGHVAVEQNTILGRVRTEQVCPKC 195
Query: 106 GQSSQHF 112
S Q F
Sbjct: 196 NGSGQEF 202
>sp|A6U251|DNAJ_STAA2 Chaperone protein DnaJ OS=Staphylococcus aureus (strain JH1)
GN=dnaJ PE=3 SV=1
Length = 379
Score = 31.2 bits (69), Expect = 2.1, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 28/67 (41%), Gaps = 12/67 (17%)
Query: 58 GNTK----RNSVVCADCDGNGA------VLCSQCKGSGVNAVD--FFGGQFKAGDSCWLC 105
G TK R V C C G+GA CS C G+G AV+ G+ + C C
Sbjct: 136 GTTKEISIRKDVTCETCHGDGAKPGTSKKTCSYCNGAGHVAVEQNTILGRVRTEQVCPKC 195
Query: 106 GQSSQHF 112
S Q F
Sbjct: 196 NGSGQEF 202
>sp|A7X2Y0|DNAJ_STAA1 Chaperone protein DnaJ OS=Staphylococcus aureus (strain Mu3 / ATCC
700698) GN=dnaJ PE=3 SV=1
Length = 379
Score = 31.2 bits (69), Expect = 2.1, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 28/67 (41%), Gaps = 12/67 (17%)
Query: 58 GNTK----RNSVVCADCDGNGA------VLCSQCKGSGVNAVD--FFGGQFKAGDSCWLC 105
G TK R V C C G+GA CS C G+G AV+ G+ + C C
Sbjct: 136 GTTKEISIRKDVTCETCHGDGAKPGTSKKTCSYCNGAGHVAVEQNTILGRVRTEQVCPKC 195
Query: 106 GQSSQHF 112
S Q F
Sbjct: 196 NGSGQEF 202
>sp|Q3ST24|PURQ_NITWN Phosphoribosylformylglycinamidine synthase 1 OS=Nitrobacter
winogradskyi (strain Nb-255 / ATCC 25391) GN=purQ PE=3
SV=1
Length = 233
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 21/51 (41%)
Query: 35 NDTPKTTKVNRLHSIRVKAAANNGNTKRNSVVCADCDGNGAVLCSQCKGSG 85
+DTP T N IRV A GN + +G G VL C SG
Sbjct: 123 SDTPFTRGYNAGQVIRVPVAHGEGNYAADEDTIRRLEGEGRVLYRYCSASG 173
>sp|Q1QMU3|PURQ_NITHX Phosphoribosylformylglycinamidine synthase 1 OS=Nitrobacter
hamburgensis (strain X14 / DSM 10229) GN=purQ PE=3 SV=1
Length = 233
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 21/51 (41%)
Query: 35 NDTPKTTKVNRLHSIRVKAAANNGNTKRNSVVCADCDGNGAVLCSQCKGSG 85
+DTP T N IRV A GN + +G G VL C +G
Sbjct: 123 SDTPFTRGYNAGQVIRVPVAHGEGNYAADEETIRRLEGEGRVLYRYCSATG 173
>sp|B3EE31|DNAJ_CHLL2 Chaperone protein DnaJ OS=Chlorobium limicola (strain DSM 245 /
NBRC 103803) GN=dnaJ PE=3 SV=1
Length = 401
Score = 29.6 bits (65), Expect = 5.8, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 7/52 (13%)
Query: 62 RNSVVCADCDGNGAVL-----CSQCKGSGV--NAVDFFGGQFKAGDSCWLCG 106
+ +VC +C+G+G+ C C GSG A GQF +C CG
Sbjct: 164 KKQIVCKECNGSGSKTGATEPCQTCHGSGEVRQASKTMFGQFVNITACPTCG 215
>sp|Q9Z9E9|DNAJ_CHLPN Chaperone protein DnaJ OS=Chlamydia pneumoniae GN=dnaJ PE=3 SV=1
Length = 392
Score = 29.6 bits (65), Expect = 6.0, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 26/63 (41%), Gaps = 12/63 (19%)
Query: 67 CADCDGNGAV------LCSQCKGSGVNAVDFFGGQFKAGDSCWLCGQSSQHFSLIQYQPH 120
C C G GAV C +CKGSG V G F +C CG + I P
Sbjct: 161 CETCSGQGAVNPQGIKSCERCKGSG--QVVQSRGFFSMASTCPECGGEGR----IITDPC 214
Query: 121 SSC 123
SSC
Sbjct: 215 SSC 217
>sp|Q9U178|UTP11_LEIMA Probable U3 small nucleolar RNA-associated protein 11
OS=Leishmania major GN=L374.02 PE=3 SV=1
Length = 361
Score = 29.3 bits (64), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 19/40 (47%)
Query: 18 KPRAHVDSSSDSKDHLINDTPKTTKVNRLHSIRVKAAANN 57
K R H+ KDH++ + KV RL I+ AA N
Sbjct: 30 KSRQHLGQLEKHKDHVLRAKKRKVKVRRLQEIKRAAAQRN 69
>sp|Q6GLQ1|SPB5_XENLA Serpin B5 OS=Xenopus laevis GN=serpinb5 PE=2 SV=1
Length = 383
Score = 29.3 bits (64), Expect = 6.9, Method: Composition-based stats.
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Query: 1 MASASCSAAMLPFAETLKPRAHVDSSSDSKDHLINDTPKTTKVNRLHSIRVKAAANNGNT 60
+ S+ S + ++ L R +VD+S + K IN T K + L +I +K+
Sbjct: 72 LLSSDISKVISIYSLKLLKRVYVDNSIECKKDFINSTKKPYPL-ELETIDIKSRPEEARC 130
Query: 61 KRNSVVCADCDGN 73
+ NS V DGN
Sbjct: 131 QINSSVKELTDGN 143
>sp|C6BYN5|DNAJ_DESAD Chaperone protein DnaJ OS=Desulfovibrio salexigens (strain ATCC
14822 / DSM 2638 / NCIB 8403 / VKM B-1763) GN=dnaJ PE=3
SV=1
Length = 373
Score = 28.9 bits (63), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
Query: 53 AAANNGNTKRNSVVCADCDGNGAVL---CSQCKGSG 85
A N R SV C C+G G V+ CS+C+G+G
Sbjct: 172 AVEQNQGFFRISVPCPACNGRGKVITDPCSECRGAG 207
>sp|Q9PK53|DNAJ_CHLMU Chaperone protein DnaJ OS=Chlamydia muridarum (strain MoPn / Nigg)
GN=dnaJ PE=3 SV=1
Length = 392
Score = 28.9 bits (63), Expect = 9.7, Method: Composition-based stats.
Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 3/22 (13%)
Query: 67 CADCDGNGAVL---CSQCKGSG 85
C DC G G V+ CS+C+G G
Sbjct: 201 CPDCSGEGRVITDPCSECRGQG 222
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.128 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,032,378
Number of Sequences: 539616
Number of extensions: 1774049
Number of successful extensions: 4985
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 53
Number of HSP's that attempted gapping in prelim test: 4949
Number of HSP's gapped (non-prelim): 84
length of query: 126
length of database: 191,569,459
effective HSP length: 92
effective length of query: 34
effective length of database: 141,924,787
effective search space: 4825442758
effective search space used: 4825442758
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)