Query 033143
Match_columns 126
No_of_seqs 147 out of 1063
Neff 9.2
Searched_HMMs 29240
Date Mon Mar 25 16:58:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033143.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/033143hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1yat_A FK506 binding protein; 100.0 5.1E-32 1.7E-36 169.9 14.5 111 5-119 2-113 (113)
2 2y78_A Peptidyl-prolyl CIS-tra 100.0 1E-31 3.5E-36 172.9 14.7 112 3-118 22-133 (133)
3 3o5e_A Peptidyl-prolyl CIS-tra 100.0 1.6E-31 5.4E-36 174.2 13.9 111 6-120 32-143 (144)
4 3kz7_A FK506-binding protein 3 100.0 2.6E-31 9E-36 168.0 14.5 109 7-119 2-119 (119)
5 3o5q_A Peptidyl-prolyl CIS-tra 100.0 1E-31 3.5E-36 172.0 12.6 111 6-120 16-127 (128)
6 2lgo_A FKBP; infectious diseas 100.0 1.8E-31 6.1E-36 171.2 13.2 112 3-118 16-130 (130)
7 4dip_A Peptidyl-prolyl CIS-tra 100.0 5.3E-31 1.8E-35 168.0 14.2 114 3-121 6-124 (125)
8 2ppn_A FK506-binding protein 1 100.0 3.2E-31 1.1E-35 164.7 12.8 106 10-119 1-107 (107)
9 1jvw_A Macrophage infectivity 100.0 1.9E-31 6.6E-36 177.3 12.1 114 3-122 31-145 (167)
10 3oe2_A Peptidyl-prolyl CIS-tra 100.0 7.6E-31 2.6E-35 180.6 13.8 107 4-119 112-218 (219)
11 1r9h_A FKB-6, FK506 binding pr 100.0 5.9E-31 2E-35 169.8 12.3 114 6-123 11-125 (135)
12 3uf8_A Ubiquitin-like protein 100.0 1.2E-30 4.1E-35 179.2 14.4 112 3-118 98-209 (209)
13 2lkn_A AH receptor-interacting 100.0 3.1E-31 1.1E-35 175.5 10.4 120 5-124 6-162 (165)
14 1fd9_A Protein (macrophage inf 100.0 1.5E-30 5E-35 178.9 13.7 111 4-120 101-211 (213)
15 3b7x_A FK506-binding protein 6 100.0 2.7E-31 9.4E-36 171.2 9.4 111 5-119 22-133 (134)
16 1u79_A FKBP-type peptidyl-prol 100.0 5.7E-31 2E-35 168.7 10.3 116 3-118 6-128 (129)
17 2f4e_A ATFKBP42; FKBP-like, al 100.0 4.1E-30 1.4E-34 173.0 14.8 118 4-123 44-163 (180)
18 2vn1_A 70 kDa peptidylprolyl i 100.0 9.4E-30 3.2E-34 163.0 14.3 114 4-121 10-128 (129)
19 2jwx_A FKBP38NTD, FK506-bindin 100.0 9.1E-30 3.1E-34 167.7 13.6 110 5-122 38-151 (157)
20 2awg_A 38 kDa FK-506 binding p 100.0 1.8E-29 6.2E-34 159.4 14.2 107 5-119 8-117 (118)
21 1q6h_A FKBP-type peptidyl-prol 100.0 1.7E-29 5.8E-34 174.8 14.4 109 4-119 116-224 (224)
22 2d9f_A FK506-binding protein 8 100.0 1.7E-29 5.9E-34 162.9 11.8 113 5-125 12-128 (135)
23 2pbc_A FK506-binding protein 2 100.0 1.5E-27 5.2E-32 146.9 11.7 98 21-122 3-100 (102)
24 1q1c_A FK506-binding protein 4 100.0 2.7E-27 9.1E-32 168.9 14.5 112 6-121 48-160 (280)
25 1kt0_A FKBP51, 51 kDa FK506-bi 99.9 1.3E-26 4.4E-31 174.4 10.7 112 6-121 28-140 (457)
26 3jxv_A 70 kDa peptidyl-prolyl 99.9 4.4E-28 1.5E-32 178.0 0.3 114 4-121 6-120 (356)
27 3jxv_A 70 kDa peptidyl-prolyl 99.9 3.7E-25 1.3E-29 162.5 13.8 112 7-120 242-355 (356)
28 2if4_A ATFKBP42; FKBP-like, al 99.9 2.2E-25 7.4E-30 162.0 11.9 117 4-122 44-162 (338)
29 1q1c_A FK506-binding protein 4 99.9 6.6E-23 2.3E-27 146.2 13.0 107 7-123 166-277 (280)
30 4dt4_A FKBP-type 16 kDa peptid 99.8 7.4E-21 2.5E-25 126.3 9.8 70 23-92 24-93 (169)
31 2k8i_A SLYD, peptidyl-prolyl C 99.8 8.2E-20 2.8E-24 121.6 11.3 68 24-92 3-70 (171)
32 1hxv_A Trigger factor; FKBP fo 99.8 2.6E-20 8.8E-25 116.5 8.2 87 21-119 27-113 (113)
33 2kr7_A FKBP-type peptidyl-prol 99.8 1.6E-19 5.4E-24 118.2 12.2 70 22-92 5-75 (151)
34 3prb_A FKBP-type peptidyl-prol 99.8 1E-19 3.4E-24 126.1 8.7 99 24-123 2-153 (231)
35 2kfw_A FKBP-type peptidyl-prol 99.8 2.1E-19 7.1E-24 121.9 10.0 69 23-92 2-70 (196)
36 1p5q_A FKBP52, FK506-binding p 99.8 2.4E-18 8.1E-23 124.7 13.8 108 5-122 21-133 (336)
37 3pr9_A FKBP-type peptidyl-prol 99.8 3.9E-19 1.3E-23 116.8 7.6 68 24-92 2-82 (157)
38 1ix5_A FKBP; ppiase, isomerase 99.8 5.1E-19 1.8E-23 115.7 5.7 69 24-92 2-83 (151)
39 3cgm_A SLYD, peptidyl-prolyl C 99.7 2.9E-17 9.9E-22 108.1 7.4 63 24-92 3-65 (158)
40 1w26_A Trigger factor, TF; cha 99.6 1.4E-15 4.8E-20 114.1 9.4 90 21-122 155-244 (432)
41 1kt0_A FKBP51, 51 kDa FK506-bi 99.5 1.1E-13 3.6E-18 104.0 12.5 107 7-122 144-254 (457)
42 1t11_A Trigger factor, TF; hel 99.5 1.5E-14 5.2E-19 107.3 4.4 88 22-121 159-246 (392)
43 3gty_X Trigger factor, TF; cha 98.5 2E-07 6.8E-12 69.9 6.7 77 23-123 154-230 (433)
44 2p4v_A Transcription elongatio 76.3 5.4 0.00018 25.5 4.8 26 62-87 119-144 (158)
45 2f23_A Anti-cleavage anti-GREA 74.2 4.7 0.00016 25.7 4.1 25 63-87 121-145 (156)
46 3cgm_A SLYD, peptidyl-prolyl C 64.3 2.5 8.5E-05 27.1 1.2 20 104-123 121-140 (158)
47 1grj_A GREA protein; transcrip 60.7 5.7 0.00019 25.4 2.4 25 63-87 122-146 (158)
48 3htx_A HEN1; HEN1, small RNA m 59.9 35 0.0012 28.2 7.2 61 24-84 561-649 (950)
49 3bmb_A Regulator of nucleoside 52.2 14 0.00047 22.8 3.1 25 63-87 90-114 (136)
50 2lkt_A Retinoic acid receptor 47.2 20 0.0007 21.5 3.3 25 22-46 6-36 (125)
51 2pn0_A Prokaryotic transcripti 45.1 15 0.0005 22.9 2.4 25 63-87 93-117 (141)
52 3tb5_A Methionine aminopeptida 42.4 76 0.0026 21.4 6.0 52 22-80 83-143 (264)
53 1o65_A Hypothetical protein YI 37.4 13 0.00044 25.6 1.3 24 7-33 152-175 (246)
54 3fm3_A Methionine aminopeptida 35.8 82 0.0028 22.6 5.5 50 23-79 120-175 (358)
55 1xgs_A Methionine aminopeptida 35.7 91 0.0031 21.6 5.6 51 22-79 71-127 (295)
56 1oru_A YUAD protein; structura 34.6 21 0.00071 23.4 2.0 24 7-33 159-182 (195)
57 2l8d_A Lamin-B receptor; DNA b 31.2 52 0.0018 17.8 2.8 17 105-121 21-37 (66)
58 3isy_A Bsupi, intracellular pr 30.8 91 0.0031 18.8 6.1 33 26-58 16-48 (120)
59 1dj7_B Ferredoxin thioredoxin 30.2 19 0.00064 20.1 1.0 12 74-85 1-12 (75)
60 3bid_A UPF0339 protein NMB1088 28.6 72 0.0025 17.0 4.7 27 12-47 2-28 (64)
61 2p5d_A UPF0310 protein mjecl36 28.0 38 0.0013 21.2 2.3 18 66-83 30-47 (147)
62 4fuk_A Methionine aminopeptida 27.9 1.6E+02 0.0055 20.8 6.2 52 22-80 142-202 (337)
63 2nw5_A Methionine aminopeptida 27.9 1.2E+02 0.004 21.9 5.1 50 23-79 122-177 (360)
64 2lj4_A Peptidyl-prolyl CIS-tra 26.8 37 0.0013 20.1 2.0 22 60-81 79-100 (115)
65 3mx6_A Methionine aminopeptida 26.3 1.5E+02 0.0051 19.9 6.0 51 22-79 87-146 (262)
66 2b3h_A Methionine aminopeptida 26.0 1.8E+02 0.006 20.6 6.0 52 22-80 154-214 (329)
67 2pv1_A Chaperone SURA; surviVa 24.9 64 0.0022 18.3 2.8 23 60-82 65-87 (103)
68 1qxy_A Methionyl aminopeptidas 24.4 1.6E+02 0.0054 19.5 6.3 52 22-80 82-143 (252)
69 2hd9_A UPF0310 protein PH1033; 24.0 50 0.0017 20.5 2.3 20 68-87 29-48 (145)
70 3gpk_A PPIC-type peptidyl-prol 23.8 53 0.0018 19.4 2.3 25 59-83 65-89 (112)
71 3lvj_C Sulfurtransferase TUSA; 23.8 72 0.0025 17.5 2.7 23 67-89 27-49 (82)
72 2rqs_A Parvulin-like peptidyl- 23.6 58 0.002 18.4 2.4 23 59-81 60-82 (97)
73 2vqe_L 30S ribosomal protein S 23.0 1.4E+02 0.0049 18.5 4.6 28 6-33 59-86 (135)
74 1jns_A Peptidyl-prolyl CIS-tra 22.2 53 0.0018 18.3 2.0 23 60-82 54-76 (92)
75 3pka_A Methionine aminopeptida 21.6 2E+02 0.0068 19.6 6.0 51 22-79 120-179 (285)
76 3s6b_A Methionine aminopeptida 21.1 2E+02 0.0069 20.8 5.3 51 22-79 182-244 (368)
77 1je3_A EC005, hypothetical 8.6 20.8 1.2E+02 0.004 17.5 3.3 24 66-89 43-66 (97)
78 3r8s_P 50S ribosomal protein L 20.6 1.3E+02 0.0043 18.1 3.5 18 22-39 17-34 (114)
79 1jdq_A TM006 protein, hypothet 20.2 89 0.0031 18.0 2.7 22 67-88 43-64 (98)
80 1o0x_A Methionine aminopeptida 20.1 2E+02 0.007 19.2 6.3 53 21-80 94-156 (262)
81 3tav_A Methionine aminopeptida 20.1 2.2E+02 0.0074 19.4 5.7 51 22-79 114-173 (286)
No 1
>1yat_A FK506 binding protein; HET: FK5; 2.50A {Saccharomyces cerevisiae} SCOP: d.26.1.1
Probab=100.00 E-value=5.1e-32 Score=169.91 Aligned_cols=111 Identities=37% Similarity=0.641 Sum_probs=102.8
Q ss_pred eEcCCCcEEEEEEcCCCCC-CCCCCEEEEEEEEEcCCCCEEecccCCCccEEEEeCCCCcchhHHHHhcCCCcCcEEEEE
Q 033143 5 VTTESGLQYKDIKVGQGPS-PPVGFQVAANYVAMIPSGQIFDSSLEKGRPYIFRVGSGQVVKGLDEGILTMKTGGKRRLY 83 (126)
Q Consensus 5 ~~~~~g~~~~i~~~G~G~~-~~~gd~V~v~y~~~~~~g~~~~st~~~~~~~~~~~g~~~~~~gl~~~l~~m~~G~~~~v~ 83 (126)
..+++|++|+++++|+|.. ++.||.|++||++++.||++|++++..+.|+.|.+|.+++++||+++|.+|++|+++++.
T Consensus 2 ~~~~~g~~~~~~~~G~g~~~~~~gd~V~v~y~~~~~dG~~~d~s~~~~~p~~f~lG~~~~i~g~e~~l~gm~~Ge~~~v~ 81 (113)
T 1yat_A 2 EVIEGNVKIDRISPGDGATFPKTGDLVTIHYTGTLENGQKFDSSVDRGSPFQCNIGVGQVIKGWDVGIPKLSVGEKARLT 81 (113)
T ss_dssp EECGGGCEEEEEECCCSSCCCCTTCEEEEEEEEEETTSCEEEESTTTTCCEEEETTSSSSCHHHHHHGGGCCTTCEEEEE
T ss_pred CCCCCCeEEEEEECCCCcccCCCCCEEEEEEEEEECCCCEEEecCCCCCcEEEEeCCCCccHHHHHHHhCCCCCCEEEEE
Confidence 4688999999999999998 999999999999999899999999876689999999999999999999999999999999
Q ss_pred EcCCCCCCCCCCCCCCCCCCCCCCceEEEEEEEeec
Q 033143 84 IPGPLAFPKGLVSAPGRPRVAPNSPVIFDVSLEYIP 119 (126)
Q Consensus 84 ip~~~ayg~~~~~~~~~~~ip~~~~l~~~i~l~~~~ 119 (126)
+||+++||+ .+.++.||||++|+|+|+|++++
T Consensus 82 ip~~~ayG~----~~~~~~Ip~~~~l~f~vel~~ik 113 (113)
T 1yat_A 82 IPGPYAYGP----RGFPGLIPPNSTLVFDVELLKVN 113 (113)
T ss_dssp ECGGGTTTT----TCBTTTBCTTCCEEEEEEEEEEC
T ss_pred ECHHHCcCC----CCCCCCcCCCCeEEEEEEEEEeC
Confidence 999999996 34445699999999999999874
No 2
>2y78_A Peptidyl-prolyl CIS-trans isomerase; MIP, ppiase, virulence; HET: SO4 GOL; 0.91A {Burkholderia pseudomallei} PDB: 2ke0_A 2ko7_A* 2l2s_A* 4dz2_A* 4dz3_A*
Probab=100.00 E-value=1e-31 Score=172.94 Aligned_cols=112 Identities=40% Similarity=0.723 Sum_probs=104.0
Q ss_pred CeeEcCCCcEEEEEEcCCCCCCCCCCEEEEEEEEEcCCCCEEecccCCCccEEEEeCCCCcchhHHHHhcCCCcCcEEEE
Q 033143 3 PMVTTESGLQYKDIKVGQGPSPPVGFQVAANYVAMIPSGQIFDSSLEKGRPYIFRVGSGQVVKGLDEGILTMKTGGKRRL 82 (126)
Q Consensus 3 ~~~~~~~g~~~~i~~~G~G~~~~~gd~V~v~y~~~~~~g~~~~st~~~~~~~~~~~g~~~~~~gl~~~l~~m~~G~~~~v 82 (126)
++.++++|++|+++++|+|..++.||.|+++|++++.||++|++++..+.|+.|.+|.+++++||+++|.+|++|++++|
T Consensus 22 ~~~~~~~gl~~~~l~~G~G~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~g~vi~G~eeaL~gmk~Ge~~~v 101 (133)
T 2y78_A 22 TVVTTESGLKYEDLTEGSGAEARAGQTVSVHYTGWLTDGQKFDSSKDRNDPFAFVLGGGMVIKGWDEGVQGMKVGGVRRL 101 (133)
T ss_dssp CCEECTTSCEEEEEECCSSCBCCTTSEEEEEEEEEETTSCEEEETTTTTCCEEEETTSSSSCHHHHHHSTTCBTTCEEEE
T ss_pred CcEECCCCEEEEEEEcCCCCCCCCCCEEEEEEEEEECCCCEEeccCcCCCCEEEEeCCCChhHHHHHHHcCCCCCCEEEE
Confidence 46789999999999999999999999999999999989999999987678999999999999999999999999999999
Q ss_pred EEcCCCCCCCCCCCCCCCCCCCCCCceEEEEEEEee
Q 033143 83 YIPGPLAFPKGLVSAPGRPRVAPNSPVIFDVSLEYI 118 (126)
Q Consensus 83 ~ip~~~ayg~~~~~~~~~~~ip~~~~l~~~i~l~~~ 118 (126)
.|||+++||+ .+..+.||||++|+|+|+|++|
T Consensus 102 ~ip~~~aYG~----~~~~~~Ipp~~~l~f~VeL~~I 133 (133)
T 2y78_A 102 TIPPQLGYGA----RGAGGVIPPNATLVFEVELLDV 133 (133)
T ss_dssp EECGGGTTTT----TCBTTTBCTTCCEEEEEEEEEC
T ss_pred EECcHHhCCC----CCCCCCCCCCCeEEEEEEEEEC
Confidence 9999999996 3444579999999999999975
No 3
>3o5e_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 1.60A {Homo sapiens} PDB: 3o5f_A
Probab=99.98 E-value=1.6e-31 Score=174.20 Aligned_cols=111 Identities=31% Similarity=0.570 Sum_probs=103.3
Q ss_pred EcCCCcEEEEEEcCCCC-CCCCCCEEEEEEEEEcCCCCEEecccCCCccEEEEeCCCCcchhHHHHhcCCCcCcEEEEEE
Q 033143 6 TTESGLQYKDIKVGQGP-SPPVGFQVAANYVAMIPSGQIFDSSLEKGRPYIFRVGSGQVVKGLDEGILTMKTGGKRRLYI 84 (126)
Q Consensus 6 ~~~~g~~~~i~~~G~G~-~~~~gd~V~v~y~~~~~~g~~~~st~~~~~~~~~~~g~~~~~~gl~~~l~~m~~G~~~~v~i 84 (126)
..++|++|+++++|+|. .|+.||.|+|||++++.||++|++++..+.|+.|.+|.+++++||+++|.+|++|++++|+|
T Consensus 32 ~~d~gv~~~i~~~G~G~~~p~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~g~~i~G~e~~l~gm~~Ge~~~v~i 111 (144)
T 3o5e_A 32 KKDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNGKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVATMKKGEICHLLC 111 (144)
T ss_dssp SCSSSEEEEEEECCBSSCCCCTTCEEEEEEEEECTTSCEEEESGGGTSCEEEETTSSSSCHHHHHHHTTCCBTCEEEEEE
T ss_pred cCCCeEEEEEEECCCCCccCCCCCEEEEEEEEEECCCCEEEeecccCCCeEEEeCCCcccHHHHHHHhCCCCCCEEEEEE
Confidence 37899999999999997 59999999999999999999999998777899999999999999999999999999999999
Q ss_pred cCCCCCCCCCCCCCCCCCCCCCCceEEEEEEEeecC
Q 033143 85 PGPLAFPKGLVSAPGRPRVAPNSPVIFDVSLEYIPG 120 (126)
Q Consensus 85 p~~~ayg~~~~~~~~~~~ip~~~~l~~~i~l~~~~~ 120 (126)
||++|||+ .+.++.||||++|+|+|+|++++.
T Consensus 112 pp~~aYG~----~g~~~~Ipp~~~L~f~VeL~~ikg 143 (144)
T 3o5e_A 112 KPEYAYGS----AGSLPKIPSNATLFFEIELLDFKG 143 (144)
T ss_dssp CGGGTTTT----TCBTTTBCTTCCEEEEEEEEEEEC
T ss_pred ChHHCcCC----CCCCCCcCCCCeEEEEEEEEEecC
Confidence 99999996 444568999999999999999875
No 4
>3kz7_A FK506-binding protein 3; FKPB ppiase rapamycin, isomerase, nucleus, phosphoprotein, R isomerase-inhibitor complex; HET: RAP; 1.95A {Mus musculus} SCOP: d.26.1.1 PDB: 1pbk_A*
Probab=99.98 E-value=2.6e-31 Score=168.01 Aligned_cols=109 Identities=33% Similarity=0.582 Sum_probs=99.0
Q ss_pred cCCCcEEEEEEcCCCCC-CCCCCEEEEEEEEEcCCCCEEecccCC-------CccEEEEeCCCCcchhHHHHhcCCCcCc
Q 033143 7 TESGLQYKDIKVGQGPS-PPVGFQVAANYVAMIPSGQIFDSSLEK-------GRPYIFRVGSGQVVKGLDEGILTMKTGG 78 (126)
Q Consensus 7 ~~~g~~~~i~~~G~G~~-~~~gd~V~v~y~~~~~~g~~~~st~~~-------~~~~~~~~g~~~~~~gl~~~l~~m~~G~ 78 (126)
.++|++|+++++|+|.. |+.||.|++||++++.||++|++++.. +.|+.|.+|.+++++||+++|.+|++|+
T Consensus 2 ~p~g~~~~il~~G~g~~~p~~gd~V~v~Y~g~~~dG~~fdss~~~~~~~~~~~~p~~f~lG~~~~i~G~e~~l~gm~~Ge 81 (119)
T 3kz7_A 2 GPPKYTKSILKKGDKTNFPKKGDVVHCWYTGTLPDGTVFDTNIQTSSKKKKNAKPLSFKVGVGKVIRGWDEALLTMSKGE 81 (119)
T ss_dssp CSCSEEEEEEECCCSSCCCCTTCEEEEEEEEECTTSCEEEECCCCSSSTTTTCCCEEEETTSSSSCHHHHHHHTTCCTTC
T ss_pred CCCccEEEEEEcCCCCCcCCCCCEEEEEEEEEECCCCEEEeccccccccccCCCCEEEEECCCChhHHHHHHHhCCCCCC
Confidence 68999999999999964 999999999999999999999999752 4799999999999999999999999999
Q ss_pred EEEEEEcCCCCCCCCCCCCCCC-CCCCCCCceEEEEEEEeec
Q 033143 79 KRRLYIPGPLAFPKGLVSAPGR-PRVAPNSPVIFDVSLEYIP 119 (126)
Q Consensus 79 ~~~v~ip~~~ayg~~~~~~~~~-~~ip~~~~l~~~i~l~~~~ 119 (126)
+++|.|||++|||+ .+.+ ..||||++|+|+|+|+++.
T Consensus 82 ~~~v~ip~~~aYG~----~g~~~~~Ip~~~~l~f~veL~~i~ 119 (119)
T 3kz7_A 82 KARLEIEPEWAYGK----KGQPDAKIPPNTKLIFEVELVDID 119 (119)
T ss_dssp EEEEEECGGGTTCT----TCBGGGTBCTTCCEEEEEEEEEEC
T ss_pred EEEEEECcHHhcCC----CCCCCCccCcCCeEEEEEEEEEeC
Confidence 99999999999996 3322 2699999999999999874
No 5
>3o5q_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 0.96A {Homo sapiens} PDB: 3o5m_A 3o5l_A 3o5o_A 3o5p_A 3o5r_A* 4drk_A* 4drm_A* 4drn_A* 4dro_A* 4drp_A* 4drq_A* 3o5j_A 3o5g_A 3o5i_A 3o5k_A
Probab=99.98 E-value=1e-31 Score=171.96 Aligned_cols=111 Identities=31% Similarity=0.570 Sum_probs=102.9
Q ss_pred EcCCCcEEEEEEcCCCC-CCCCCCEEEEEEEEEcCCCCEEecccCCCccEEEEeCCCCcchhHHHHhcCCCcCcEEEEEE
Q 033143 6 TTESGLQYKDIKVGQGP-SPPVGFQVAANYVAMIPSGQIFDSSLEKGRPYIFRVGSGQVVKGLDEGILTMKTGGKRRLYI 84 (126)
Q Consensus 6 ~~~~g~~~~i~~~G~G~-~~~~gd~V~v~y~~~~~~g~~~~st~~~~~~~~~~~g~~~~~~gl~~~l~~m~~G~~~~v~i 84 (126)
.+++|++|+++++|+|. .|+.||.|++||++++.||++|++++..+.|+.|.+|.+++++||+++|.+|++|++++|.|
T Consensus 16 ~~d~gv~~~i~~~G~G~~~p~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~g~~i~G~e~~l~gm~~Ge~~~v~i 95 (128)
T 3o5q_A 16 KKDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNGKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVATMKKGEICHLLC 95 (128)
T ss_dssp SCSSSEEEEEEECCSSSCCCCTTCEEEEEEEEEETTSCEEEEHHHHTSCEEEETTSSSSCHHHHHHHTTCCTTCEEEEEE
T ss_pred cCCCCEEEEEEECCCCCccCCCCCEEEEEEEEEECCCCEEEecCCCCCCEEEEECCCCccHHHHHHHhcCCCCCEEEEEE
Confidence 47899999999999997 58999999999999999999999998666899999999999999999999999999999999
Q ss_pred cCCCCCCCCCCCCCCCCCCCCCCceEEEEEEEeecC
Q 033143 85 PGPLAFPKGLVSAPGRPRVAPNSPVIFDVSLEYIPG 120 (126)
Q Consensus 85 p~~~ayg~~~~~~~~~~~ip~~~~l~~~i~l~~~~~ 120 (126)
||++|||+ .+..+.||||++|+|+|+|++++.
T Consensus 96 p~~~aYG~----~g~~~~Ip~~~~l~f~vel~~i~~ 127 (128)
T 3o5q_A 96 KPEYAYGS----AGSLPKIPSNATLFFEIELLDFKG 127 (128)
T ss_dssp CGGGTTTT----TCBTTTBCTTCCEEEEEEEEEEEC
T ss_pred ChHHcCCC----CCCCCCcCCCCEEEEEEEEEEecC
Confidence 99999996 444568999999999999999875
No 6
>2lgo_A FKBP; infectious disease, isomerase, giardiasis, ssgcid, structura genomics, seattle structural genomics center for infectious; NMR {Giardia lamblia}
Probab=99.98 E-value=1.8e-31 Score=171.23 Aligned_cols=112 Identities=32% Similarity=0.594 Sum_probs=103.6
Q ss_pred CeeEcCCCcEEE--EEEcCCCCC-CCCCCEEEEEEEEEcCCCCEEecccCCCccEEEEeCCCCcchhHHHHhcCCCcCcE
Q 033143 3 PMVTTESGLQYK--DIKVGQGPS-PPVGFQVAANYVAMIPSGQIFDSSLEKGRPYIFRVGSGQVVKGLDEGILTMKTGGK 79 (126)
Q Consensus 3 ~~~~~~~g~~~~--i~~~G~G~~-~~~gd~V~v~y~~~~~~g~~~~st~~~~~~~~~~~g~~~~~~gl~~~l~~m~~G~~ 79 (126)
++..+++|++|+ ++++|+|.. ++.||.|+++|++++.||++|++++..+.|+.|.+|.+++++||+++|.+|++|++
T Consensus 16 ~~~~~~~Gl~~~K~~l~~G~G~~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~g~vi~G~e~aL~gm~~Ge~ 95 (130)
T 2lgo_A 16 TQGPGSMSAQLEKKVLTPGDGVTKPQAGKKVTVHYDGRFPDGKQFDSSRSRGKPFQFTLGAGEVIKGWDQGVATMTLGEK 95 (130)
T ss_dssp SCSSSSSSCCCCEEEEECCCSSCCCCTTSEEEEEEEEECTTSCEEECTTTTTCCEEEETTSTTSCHHHHHHHHHSCTTEE
T ss_pred cceeCCCceEEEEEEEeccCCCccCCCCCEEEEEEEEEECCCCEEEccCcCCCCEEEEeCCCCccHHHHHHHhCCCCCCE
Confidence 457789999999 999999998 99999999999999989999999987668999999999999999999999999999
Q ss_pred EEEEEcCCCCCCCCCCCCCCCCCCCCCCceEEEEEEEee
Q 033143 80 RRLYIPGPLAFPKGLVSAPGRPRVAPNSPVIFDVSLEYI 118 (126)
Q Consensus 80 ~~v~ip~~~ayg~~~~~~~~~~~ip~~~~l~~~i~l~~~ 118 (126)
++|.|||+++||+ .+.++.||||++|+|+|+|+++
T Consensus 96 ~~v~ip~~~aYG~----~~~~~~Ip~~~~l~f~VeL~~i 130 (130)
T 2lgo_A 96 ALFTIPYQLAYGE----RGYPPVIPPKATLVFEVELLAV 130 (130)
T ss_dssp EEEEECTTTSTTT----TCCSTTSCSSCCEEEEEEEEEC
T ss_pred EEEEECcHHHCCC----CCCCCCcCCCCeEEEEEEEEEC
Confidence 9999999999996 4445579999999999999875
No 7
>4dip_A Peptidyl-prolyl CIS-trans isomerase FKBP14; structural genomics, structural genomics consortium, SGC, PE prolyl CIS-trans isomerase; 1.82A {Homo sapiens}
Probab=99.97 E-value=5.3e-31 Score=167.96 Aligned_cols=114 Identities=26% Similarity=0.464 Sum_probs=103.5
Q ss_pred CeeEcCCCcEEEEEEcCC--CCCCCCCCEEEEEEEEEcC-CCCEEecccC--CCccEEEEeCCCCcchhHHHHhcCCCcC
Q 033143 3 PMVTTESGLQYKDIKVGQ--GPSPPVGFQVAANYVAMIP-SGQIFDSSLE--KGRPYIFRVGSGQVVKGLDEGILTMKTG 77 (126)
Q Consensus 3 ~~~~~~~g~~~~i~~~G~--G~~~~~gd~V~v~y~~~~~-~g~~~~st~~--~~~~~~~~~g~~~~~~gl~~~l~~m~~G 77 (126)
....+++|++|+++++|+ |..++.||.|++||++++. ||++|++++. .+.|+.|.+|.+++++||+++|.+|++|
T Consensus 6 ~~~~~~~gl~~~~l~~g~~~g~~~~~gd~V~v~Y~g~~~~dG~~fdss~~~~~~~p~~f~lG~~~~i~G~e~~l~gm~~G 85 (125)
T 4dip_A 6 GALIPEPEVKIEVLQKPFICHRKTKGGDLMLVHYEGYLEKDGSLFHSTHKHNNGQPIWFTLGILEALKGWDQGLKGMCVG 85 (125)
T ss_dssp GGGCCCCCCEEEEEECCSCCSCCCCTTCEEEEEEEEEETTTCCEEEEHHHHTTTCCEEEETTSCSSCHHHHHHSTTCCTT
T ss_pred ceEECCCCeEEEEEEcCCCCCCcCCCCCEEEEEEEEEECCCCcEEEEcccCCCCcCEEEEeCCCChhHHHHHHHhCCCCC
Confidence 346789999999999998 7789999999999999998 9999999973 4579999999999999999999999999
Q ss_pred cEEEEEEcCCCCCCCCCCCCCCCCCCCCCCceEEEEEEEeecCC
Q 033143 78 GKRRLYIPGPLAFPKGLVSAPGRPRVAPNSPVIFDVSLEYIPGL 121 (126)
Q Consensus 78 ~~~~v~ip~~~ayg~~~~~~~~~~~ip~~~~l~~~i~l~~~~~~ 121 (126)
++++|.|||++|||+ . ..+.||||++|+|+|+|+++++.
T Consensus 86 e~~~~~ip~~~aYG~----~-g~~~Ip~~~~l~f~vel~~i~~~ 124 (125)
T 4dip_A 86 EKRKLIIPPALGYGK----E-GKGKIPPESTLIFNIDLLEIRNG 124 (125)
T ss_dssp CEEEEEECGGGTTTT----T-CBTTBCTTCCEEEEEEEEEEECC
T ss_pred CEEEEEEChHHhcCC----C-CCCCCCCCCeEEEEEEEEEEEcC
Confidence 999999999999995 2 23479999999999999999764
No 8
>2ppn_A FK506-binding protein 1A; high resolution protein structure, isomerase; 0.92A {Homo sapiens} SCOP: d.26.1.1 PDB: 1b6c_A 1a7x_A 1d7h_A 1d7i_A 1d7j_A* 1f40_A* 1fap_A* 1d6o_A* 1fkd_A* 1fkf_A* 1fkg_A* 1fkh_A* 1fki_A* 1fkj_A* 1fkr_A 1fks_A 1fkt_A 1j4h_A* 1j4i_A* 1j4r_A* ...
Probab=99.97 E-value=3.2e-31 Score=164.72 Aligned_cols=106 Identities=29% Similarity=0.597 Sum_probs=98.0
Q ss_pred CcEEEEEEcCCCCC-CCCCCEEEEEEEEEcCCCCEEecccCCCccEEEEeCCCCcchhHHHHhcCCCcCcEEEEEEcCCC
Q 033143 10 GLQYKDIKVGQGPS-PPVGFQVAANYVAMIPSGQIFDSSLEKGRPYIFRVGSGQVVKGLDEGILTMKTGGKRRLYIPGPL 88 (126)
Q Consensus 10 g~~~~i~~~G~G~~-~~~gd~V~v~y~~~~~~g~~~~st~~~~~~~~~~~g~~~~~~gl~~~l~~m~~G~~~~v~ip~~~ 88 (126)
|++|+++++|+|.. ++.||.|++||++++.||++|++++..+.|+.|.+|.+++++||+++|.+|++|+++++.+||++
T Consensus 1 Gl~~~~~~~G~g~~~~~~gd~V~v~y~~~~~dG~~~d~s~~~~~p~~f~lG~~~~i~g~~~~l~gm~~Ge~~~~~ip~~~ 80 (107)
T 2ppn_A 1 GVQVETISPGDGRTFPKRGQTCVVHYTGMLEDGKKFDSSRDRNKPFKFMLGKQEVIRGWEEGVAQMSVGQRAKLTISPDY 80 (107)
T ss_dssp CEEEEEEECCCSSCCCCTTCEEEEEEEEEETTSCEEEEHHHHTSCEEEETTSCCSCHHHHHHHTTCCTTCEEEEEECGGG
T ss_pred CcEEEEEECcCCCcCCCCCCEEEEEEEEEECCCCEEEecCCCCCCEEEEeCCCChHHHHHHHHhCCCCCCEEEEEECHHH
Confidence 78999999999988 99999999999999989999999976557999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCceEEEEEEEeec
Q 033143 89 AFPKGLVSAPGRPRVAPNSPVIFDVSLEYIP 119 (126)
Q Consensus 89 ayg~~~~~~~~~~~ip~~~~l~~~i~l~~~~ 119 (126)
+||+ .+.++.||||++|+|+|+|++++
T Consensus 81 ayG~----~~~~~~Ip~~~~l~f~v~l~~v~ 107 (107)
T 2ppn_A 81 AYGA----TGHPGIIPPHATLVFDVELLKLE 107 (107)
T ss_dssp TTTT----TCBTTTBCTTCCEEEEEEEEEEC
T ss_pred ccCC----CCCCCCcCCCCeEEEEEEEEEeC
Confidence 9996 33445799999999999999874
No 9
>1jvw_A Macrophage infectivity potentiator; chagas disease, X-RAY rotamase, isomeras; 1.70A {Trypanosoma cruzi} SCOP: d.26.1.1
Probab=99.97 E-value=1.9e-31 Score=177.35 Aligned_cols=114 Identities=35% Similarity=0.594 Sum_probs=104.2
Q ss_pred CeeEcCCCcEEEEEEcCCCCC-CCCCCEEEEEEEEEcCCCCEEecccCCCccEEEEeCCCCcchhHHHHhcCCCcCcEEE
Q 033143 3 PMVTTESGLQYKDIKVGQGPS-PPVGFQVAANYVAMIPSGQIFDSSLEKGRPYIFRVGSGQVVKGLDEGILTMKTGGKRR 81 (126)
Q Consensus 3 ~~~~~~~g~~~~i~~~G~G~~-~~~gd~V~v~y~~~~~~g~~~~st~~~~~~~~~~~g~~~~~~gl~~~l~~m~~G~~~~ 81 (126)
.+.++++|++|+++++|+|.. |+.||.|+|||++++.||++|++++..+.|+.|.+ +++++||+++|.+|++|++++
T Consensus 31 ~~~~~~sGl~~~vl~~G~G~~~~~~gd~V~v~Y~g~l~dG~~fdss~~~g~p~~f~l--g~vI~G~eeaL~gMk~Ge~~~ 108 (167)
T 1jvw_A 31 DAVKLPSGLVFQRIARGSGKRAPAIDDKCEVHYTGRLRDGTVFDSSRERGKPTTFRP--NEVIKGWTEALQLMREGDRWR 108 (167)
T ss_dssp TEEECTTSCEEEEEECCCCSBCCCTTCCEEEEEEEECTTSCEEEEHHHHTSCEEECG--GGSCHHHHHHHTTCCTTCEEE
T ss_pred CcEECCCCEEEEEEEcCCCCcCCCCCCEEEEEEEEEECCCCEEeeccccCCCEEEEe--CchhHHHHHHHcCCCCCCEEE
Confidence 357899999999999999998 99999999999999999999999986667999999 589999999999999999999
Q ss_pred EEEcCCCCCCCCCCCCCCCCCCCCCCceEEEEEEEeecCCC
Q 033143 82 LYIPGPLAFPKGLVSAPGRPRVAPNSPVIFDVSLEYIPGLE 122 (126)
Q Consensus 82 v~ip~~~ayg~~~~~~~~~~~ip~~~~l~~~i~l~~~~~~~ 122 (126)
|+|||++|||+ .+..+.||||++|+|+|+|+++.+..
T Consensus 109 ~~Ip~~laYG~----~g~~~~Ipp~s~LiF~VeL~~i~~~~ 145 (167)
T 1jvw_A 109 LFIPYDLAYGV----TGGGGMIPPYSPLEFDVELISIKDGG 145 (167)
T ss_dssp EEECGGGTTTT----TCSSSSSCTTCCEEEEEEEEEEGGGC
T ss_pred EEECchhhCCC----CCCCCCcCCCCeEEEEEEEEEEEcCC
Confidence 99999999996 34446799999999999999998654
No 10
>3oe2_A Peptidyl-prolyl CIS-trans isomerase; FKBP, ppiase, FK506; HET: TAR SRT; 1.60A {Pseudomonas syringae PV} SCOP: d.26.1.0
Probab=99.97 E-value=7.6e-31 Score=180.62 Aligned_cols=107 Identities=30% Similarity=0.589 Sum_probs=99.5
Q ss_pred eeEcCCCcEEEEEEcCCCCCCCCCCEEEEEEEEEcCCCCEEecccCCCccEEEEeCCCCcchhHHHHhcCCCcCcEEEEE
Q 033143 4 MVTTESGLQYKDIKVGQGPSPPVGFQVAANYVAMIPSGQIFDSSLEKGRPYIFRVGSGQVVKGLDEGILTMKTGGKRRLY 83 (126)
Q Consensus 4 ~~~~~~g~~~~i~~~G~G~~~~~gd~V~v~y~~~~~~g~~~~st~~~~~~~~~~~g~~~~~~gl~~~l~~m~~G~~~~v~ 83 (126)
+.++++|++|+++++|+|..|..||.|+|||++++.||++|+++ +.|+.|.+| ++++||+++|.+|++|++++|+
T Consensus 112 v~~~~sGl~y~vl~~G~G~~p~~gd~V~V~Y~g~l~dG~vfDss---~~P~~f~lG--~vI~G~eeaL~gMk~Gek~~v~ 186 (219)
T 3oe2_A 112 VKELADGILMTELTPGTGPKPDANGRVEVRYVGRLPDGKIFDQS---TQPQWFRLD--SVISGWTSALQNMPTGAKWRLV 186 (219)
T ss_dssp CEECGGGCEEEEEECCCSCCCCTTSEEEEEEEEECTTSCEEEEC---SSCEEEEGG--GSCHHHHHHHTTCCTTCEEEEE
T ss_pred cEECCCCeEEEEEecCCCccCCCCCEEEEEEEEEECCCCEeecc---CCcEEEEec--chhHHHHHHHhCCCCCCEEEEE
Confidence 56899999999999999999999999999999999999999998 579999996 8999999999999999999999
Q ss_pred EcCCCCCCCCCCCCCCCCCCCCCCceEEEEEEEeec
Q 033143 84 IPGPLAFPKGLVSAPGRPRVAPNSPVIFDVSLEYIP 119 (126)
Q Consensus 84 ip~~~ayg~~~~~~~~~~~ip~~~~l~~~i~l~~~~ 119 (126)
|||++|||+ .+..+.||||++|+|+|+|++|+
T Consensus 187 IPp~lAYG~----~g~~~~IPpnstLvFeVeLl~Ik 218 (219)
T 3oe2_A 187 IPSDQAYGA----EGAGDLIDPFTPLVFEIELIAVS 218 (219)
T ss_dssp ECGGGTTTT----TCBTTTBCTTCCEEEEEEEEEEE
T ss_pred ECchhcCCC----CCCCCCCCCCCeEEEEEEEEEEe
Confidence 999999996 33445699999999999999986
No 11
>1r9h_A FKB-6, FK506 binding protein family; structural genomics, peptidylprolyl isomerase, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: d.26.1.1
Probab=99.97 E-value=5.9e-31 Score=169.81 Aligned_cols=114 Identities=30% Similarity=0.513 Sum_probs=102.7
Q ss_pred EcCCCcEEEEEEcCCCC-CCCCCCEEEEEEEEEcCCCCEEecccCCCccEEEEeCCCCcchhHHHHhcCCCcCcEEEEEE
Q 033143 6 TTESGLQYKDIKVGQGP-SPPVGFQVAANYVAMIPSGQIFDSSLEKGRPYIFRVGSGQVVKGLDEGILTMKTGGKRRLYI 84 (126)
Q Consensus 6 ~~~~g~~~~i~~~G~G~-~~~~gd~V~v~y~~~~~~g~~~~st~~~~~~~~~~~g~~~~~~gl~~~l~~m~~G~~~~v~i 84 (126)
++++|++|+++++|+|. .++.||.|++||++++.||++|++++..+.|+.|.+|.+++++||+++|.+|++|++++|.|
T Consensus 11 ~~~~gl~~~~l~~G~g~~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~~~vi~G~e~~l~gm~~Ge~~~v~i 90 (135)
T 1r9h_A 11 KKDGGVLKLIKKEGQGVVKPTTGTTVKVHYVGTLENGTKFDSSRDRGDQFSFNLGRGNVIKGWDLGVATMTKGEVAEFTI 90 (135)
T ss_dssp TCCSSEEEEEEECCBSSCCCCTTCEEEEEEEEEETTSCEEEEHHHHTSCEEEETTTTSSCHHHHHHHTTCCBTCEEEEEE
T ss_pred CCCCcEEEEEEEccCCCcCCCCCCEEEEEEEEEECCCCEEEecCcCCCCEEEEeCCCCccHHHHHHHhcCCCCCEEEEEE
Confidence 37899999999999997 59999999999999998999999997656799999999999999999999999999999999
Q ss_pred cCCCCCCCCCCCCCCCCCCCCCCceEEEEEEEeecCCCC
Q 033143 85 PGPLAFPKGLVSAPGRPRVAPNSPVIFDVSLEYIPGLEA 123 (126)
Q Consensus 85 p~~~ayg~~~~~~~~~~~ip~~~~l~~~i~l~~~~~~~~ 123 (126)
||++|||+ .+.++.||+|++|+|+|+|+++.....
T Consensus 91 p~~~aYG~----~g~~~~Ip~~~~l~f~v~l~~i~~~~l 125 (135)
T 1r9h_A 91 RSDYGYGD----AGSPPKIPGGATLIFEVELFEWSAEDI 125 (135)
T ss_dssp CGGGTTTT----TCBTTTBCTTCCEEEEEEEEEEEC---
T ss_pred ChHHcCCC----CCCCCCcCcCCcEEEEEEEEEeecCCc
Confidence 99999996 344567999999999999999987643
No 12
>3uf8_A Ubiquitin-like protein SMT3, peptidyl-prolyl CIS- isomerase; ssgcid, seattle structural genomics center for in disease; HET: FK5; 1.50A {Burkholderia pseudomallei} PDB: 4ggq_C* 3vaw_A* 3uqa_A* 4g50_A* 4fn2_A* 3uqb_A* 4giv_A* 1euv_B 3v60_A 3v61_A 3v62_A*
Probab=99.97 E-value=1.2e-30 Score=179.19 Aligned_cols=112 Identities=40% Similarity=0.724 Sum_probs=104.5
Q ss_pred CeeEcCCCcEEEEEEcCCCCCCCCCCEEEEEEEEEcCCCCEEecccCCCccEEEEeCCCCcchhHHHHhcCCCcCcEEEE
Q 033143 3 PMVTTESGLQYKDIKVGQGPSPPVGFQVAANYVAMIPSGQIFDSSLEKGRPYIFRVGSGQVVKGLDEGILTMKTGGKRRL 82 (126)
Q Consensus 3 ~~~~~~~g~~~~i~~~G~G~~~~~gd~V~v~y~~~~~~g~~~~st~~~~~~~~~~~g~~~~~~gl~~~l~~m~~G~~~~v 82 (126)
.+.++++|++|+++++|+|..++.||.|++||++++.||++|++++..+.|+.|.+|.+++++||+++|.+|++|++++|
T Consensus 98 t~~~~~sGl~~~vl~~G~G~~~~~gd~V~v~Y~g~l~dG~~fdss~~~~~P~~f~lG~g~vi~G~eeaL~gM~~Ge~~~v 177 (209)
T 3uf8_A 98 TVVTTESGLKYEDLTEGSGAEARAGQTVSVHYTGWLTDGQKFDSSKDRNDPFAFVLGGGMVIKGWDEGVQGMKVGGVRRL 177 (209)
T ss_dssp CCEECTTSCEEEEEECCCSCBCCTTCEEEEEEEEEETTSCEEEESGGGTCCEEEETTSSSSCHHHHHHHTTCBTTCEEEE
T ss_pred cccCCCCceEEEEEEcCCCCcCCCCCEEEEEEEEEECCCCEEEEccccCCCEEEEeCCCccchhHHHHHhCCCCCCEEEE
Confidence 36789999999999999999999999999999999999999999987778999999999999999999999999999999
Q ss_pred EEcCCCCCCCCCCCCCCCCCCCCCCceEEEEEEEee
Q 033143 83 YIPGPLAFPKGLVSAPGRPRVAPNSPVIFDVSLEYI 118 (126)
Q Consensus 83 ~ip~~~ayg~~~~~~~~~~~ip~~~~l~~~i~l~~~ 118 (126)
+|||++|||+ .+..+.||||++|+|+|+|++|
T Consensus 178 ~Ipp~~aYG~----~g~~~~IP~~s~LvF~VeL~~I 209 (209)
T 3uf8_A 178 TIPPQLGYGA----RGAAGVIPPNATLVFEVELLDV 209 (209)
T ss_dssp EECGGGTTTT----TCBTTTBCTTCCEEEEEEEEEC
T ss_pred EECcHHhCCC----CCCCCCcCCCCeEEEEEEEEEC
Confidence 9999999996 4444569999999999999975
No 13
>2lkn_A AH receptor-interacting protein; FKBP-type domain, immunophilin homolog, protein binding; NMR {Homo sapiens}
Probab=99.97 E-value=3.1e-31 Score=175.49 Aligned_cols=120 Identities=18% Similarity=0.253 Sum_probs=100.6
Q ss_pred eEcCCCcEEEEEEcCCCCCC--CCCCEEEEEEEEEcC--CCCEEecccCCCccEEEEeCCCCcchhHHHHhcCCCcCcEE
Q 033143 5 VTTESGLQYKDIKVGQGPSP--PVGFQVAANYVAMIP--SGQIFDSSLEKGRPYIFRVGSGQVVKGLDEGILTMKTGGKR 80 (126)
Q Consensus 5 ~~~~~g~~~~i~~~G~G~~~--~~gd~V~v~y~~~~~--~g~~~~st~~~~~~~~~~~g~~~~~~gl~~~l~~m~~G~~~ 80 (126)
..+++|++|+++++|+|..| ..||.|+|||++++. ||++||||+.+++|+.|.+|.+++|+||+++|.+|++|+++
T Consensus 6 ~~~~~Gv~~~vl~~G~G~~p~~~~G~~V~vhY~g~l~d~~G~~FDsS~~rg~P~~f~lG~g~vI~Gwd~gl~~M~~Ge~~ 85 (165)
T 2lkn_A 6 RLREDGIQKRVIQEGRGELPDFQDGTKATFHYRTLHSDDEGTVLDDSRARGKPMELIIGKKFKLPVWETIVCTMREGEIA 85 (165)
T ss_dssp HHHTTSCCCCEEECCSSCCCCCCTTCEEEEECEEECSSSSCCEEEESTTTTCCEEEESSSSCSCSHHHHHHTTCCTTCEE
T ss_pred cccCCCeEEEEEECCcCCCCCCCCCCEEEEEEEEEEeCCCccEEEecccCCCCEEEEecCCCccHHHHHHHhcCccCceE
Confidence 46899999999999999764 689999999999986 49999999998899999999999999999999999999999
Q ss_pred EEEEcCCCCCCCC---------CCCCCCC------------------------CCCCCCCceEEEEEEEeecCCCCC
Q 033143 81 RLYIPGPLAFPKG---------LVSAPGR------------------------PRVAPNSPVIFDVSLEYIPGLEAD 124 (126)
Q Consensus 81 ~v~ip~~~ayg~~---------~~~~~~~------------------------~~ip~~~~l~~~i~l~~~~~~~~~ 124 (126)
+|+|||++|||.. ....... ..++++++|+|+|||++|+.+.+-
T Consensus 86 ~~~ipp~laYG~p~v~~~~r~~~~~~~p~~~~~~~~g~~~~~~~~~~g~~d~~~li~~p~~L~FeIELl~Ve~P~ey 162 (165)
T 2lkn_A 86 QFLCDIKHVVLYPLVAKSLRNIAVGKDPLEGQRHCCGVAQMREHSSLGHADLDALQQNPQPLIFHMEMLKVESPGTY 162 (165)
T ss_dssp EEECCHHHHSSHHHHHHHHTTGGGSSTTTTTCSCCSSCCSCCCCCCCCCSTTTHHHHSCCCCEEEEEEEEEECTTTC
T ss_pred EEEECHHHhcCCcchhhhhhhccccCCCccccccceeeeeccccccccccccccccCCCCCeEEEEEEEEEcCCccc
Confidence 9999999999820 0000000 013455789999999999987763
No 14
>1fd9_A Protein (macrophage infectivity potentiator prote; FKBP domain, long alpha helix, dimerisation VIA helical INTE isomerase; 2.41A {Legionella pneumophila} SCOP: d.26.1.1 PDB: 2uz5_A 2vcd_A*
Probab=99.97 E-value=1.5e-30 Score=178.94 Aligned_cols=111 Identities=32% Similarity=0.567 Sum_probs=102.7
Q ss_pred eeEcCCCcEEEEEEcCCCCCCCCCCEEEEEEEEEcCCCCEEecccCCCccEEEEeCCCCcchhHHHHhcCCCcCcEEEEE
Q 033143 4 MVTTESGLQYKDIKVGQGPSPPVGFQVAANYVAMIPSGQIFDSSLEKGRPYIFRVGSGQVVKGLDEGILTMKTGGKRRLY 83 (126)
Q Consensus 4 ~~~~~~g~~~~i~~~G~G~~~~~gd~V~v~y~~~~~~g~~~~st~~~~~~~~~~~g~~~~~~gl~~~l~~m~~G~~~~v~ 83 (126)
+.++++|++|+++++|+|..|+.||.|+|||++++.||++|++++..+.|+.|.+ +++++||+++|.+|++|++++|+
T Consensus 101 v~~~~sGl~y~vl~~G~G~~p~~gD~V~V~Y~g~l~dG~vfdss~~~g~p~~f~l--g~vI~G~eeaL~gMk~Gek~~v~ 178 (213)
T 1fd9_A 101 VVVLPSGLQYKVINSGNGVKPGKSDTVTVEYTGRLIDGTVFDSTEKTGKPATFQV--SQVIPGWTEALQLMPAGSTWEIY 178 (213)
T ss_dssp EEECTTSCEEEEEECCCSCCCCTTCEEEEEEEEEETTSCEEEEHHHHCSCEEEEG--GGSCHHHHHHHTTCCTTCEEEEE
T ss_pred cEECCCccEEEEEecCCCccCCCCCEEEEEEEEEECCCCEEeeccccCCCEEEEc--CchhhHHHHHHcCCCCCCEEEEE
Confidence 5789999999999999999999999999999999999999999987668999999 58999999999999999999999
Q ss_pred EcCCCCCCCCCCCCCCCCCCCCCCceEEEEEEEeecC
Q 033143 84 IPGPLAFPKGLVSAPGRPRVAPNSPVIFDVSLEYIPG 120 (126)
Q Consensus 84 ip~~~ayg~~~~~~~~~~~ip~~~~l~~~i~l~~~~~ 120 (126)
|||+++||+ .+..+.||||++|+|+|+|+++.+
T Consensus 179 IP~~laYG~----~g~~~~Ipp~stLiF~VeLl~v~~ 211 (213)
T 1fd9_A 179 VPSGLAYGP----RSVGGPIGPNETLIFKIHLISVKK 211 (213)
T ss_dssp ECGGGTTTT----CCCSSSCCTTCCEEEEEEEEEEEC
T ss_pred ECchhccCc----cCCCCCCCCCCeEEEEEEEEEEEc
Confidence 999999996 333457999999999999999975
No 15
>3b7x_A FK506-binding protein 6; isomerase, repeat, rotamase, TPR repeat, williams-beuren syndrome, structural genomics consortium, SGC; 2.10A {Homo sapiens}
Probab=99.97 E-value=2.7e-31 Score=171.17 Aligned_cols=111 Identities=22% Similarity=0.408 Sum_probs=95.7
Q ss_pred eEcCCCcEEEEEEcCCCCCCCCCCEEEEEEEEEcC-CCCEEecccCCCccEEEEeCCCCcchhHHHHhcCCCcCcEEEEE
Q 033143 5 VTTESGLQYKDIKVGQGPSPPVGFQVAANYVAMIP-SGQIFDSSLEKGRPYIFRVGSGQVVKGLDEGILTMKTGGKRRLY 83 (126)
Q Consensus 5 ~~~~~g~~~~i~~~G~G~~~~~gd~V~v~y~~~~~-~g~~~~st~~~~~~~~~~~g~~~~~~gl~~~l~~m~~G~~~~v~ 83 (126)
.++++|++|+++++|+|..+..||.|++||++++. +|++|++++..+.|+.|.+|.+++++||+++|.+|++|++++|.
T Consensus 22 v~~~~gl~~~vl~~G~g~~~~~gd~V~v~Y~g~l~~~G~~fdss~~~~~p~~f~lG~g~~i~G~e~aL~gm~~Ge~~~v~ 101 (134)
T 3b7x_A 22 ISGDRGVLKDVIREGAGDLVAPDASVLVKYSGYLEHMDRPFDSNYFRKTPRLMKLGEDITLWGMELGLLSMRRGELARFL 101 (134)
T ss_dssp SSSSSSEEEEEEECCEEEECCTTCEEEEEEEEECTTCSSCSEEC-------CEEC-CCCCCHHHHHHHHTCEETCEEEEE
T ss_pred eeCCCCEEEEEEEcCCCCCCCCCCEEEEEEEEEECCCCeEEEecCCCCCCEEEEcCCcchhHHHHHHHhCCCCCCEEEEE
Confidence 35789999999999999999999999999999988 69999999876689999999999999999999999999999999
Q ss_pred EcCCCCCCCCCCCCCCCCCCCCCCceEEEEEEEeec
Q 033143 84 IPGPLAFPKGLVSAPGRPRVAPNSPVIFDVSLEYIP 119 (126)
Q Consensus 84 ip~~~ayg~~~~~~~~~~~ip~~~~l~~~i~l~~~~ 119 (126)
|||++|||+ .+.++.||||++|+|+|+|++++
T Consensus 102 ip~~~aYG~----~~~~~~Ip~~~~l~f~VeL~~i~ 133 (134)
T 3b7x_A 102 FKPNYAYGT----LGCPPLIPPNTTVLFEIELLDFL 133 (134)
T ss_dssp ECGGGTTTT----TCBTTTBCTTCCEEEEEEEEEEC
T ss_pred ECHHHCcCC----CCCCCCcCcCCeEEEEEEEEEEe
Confidence 999999996 44445699999999999999986
No 16
>1u79_A FKBP-type peptidyl-prolyl CIS-trans isomerase 3; TFKBP13, FK-506 binding protein; 1.85A {Arabidopsis thaliana} SCOP: d.26.1.1 PDB: 1y0o_A
Probab=99.97 E-value=5.7e-31 Score=168.67 Aligned_cols=116 Identities=40% Similarity=0.672 Sum_probs=102.9
Q ss_pred CeeEcCCCcEEEEEEcCCCCCCCCCCEEEEEEEEEcCCCCEEecccCCCccEEEEeCCCCcchhHHHHhcC------CCc
Q 033143 3 PMVTTESGLQYKDIKVGQGPSPPVGFQVAANYVAMIPSGQIFDSSLEKGRPYIFRVGSGQVVKGLDEGILT------MKT 76 (126)
Q Consensus 3 ~~~~~~~g~~~~i~~~G~G~~~~~gd~V~v~y~~~~~~g~~~~st~~~~~~~~~~~g~~~~~~gl~~~l~~------m~~ 76 (126)
.+.++++|++|+++++|+|..++.||.|++||++++.||++|++++..+.|+.|.+|.+++++||+++|.+ |++
T Consensus 6 ~~~~~~~Gl~~~~l~~G~G~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~~~~i~G~~~~L~G~~~~~~m~~ 85 (129)
T 1u79_A 6 EFSVSPSGLAFCDKVVGYGPEAVKGQLIKAHYVGKLENGKVFDSSYNRGKPLTFRIGVGEVIKGWDQGILGSDGIPPMLT 85 (129)
T ss_dssp CCEECTTSCEEEEEECCSSCBCCTTCEEEEEEEEECTTSCEEEEHHHHTSCEEEETTSSSSCHHHHHHHHCBTTBCCCBT
T ss_pred ccEECCCCeEEEEEEcCCCCCCCCCCEEEEEEEEEECCCCEEEecCCCCCCEEEEeCCCCccHHHHHHhcccccccccCC
Confidence 46789999999999999999999999999999999989999999976567999999999999999999998 999
Q ss_pred CcEEEEEEcCCCCCCCCCCC-CCCCCCCCCCCceEEEEEEEee
Q 033143 77 GGKRRLYIPGPLAFPKGLVS-APGRPRVAPNSPVIFDVSLEYI 118 (126)
Q Consensus 77 G~~~~v~ip~~~ayg~~~~~-~~~~~~ip~~~~l~~~i~l~~~ 118 (126)
|+++++.|||+++||+.... ....+.||||++|+|+|+|+++
T Consensus 86 Ge~~~v~ip~~~aYG~~~~~~~~~~~~Ip~~~~l~f~vel~~i 128 (129)
T 1u79_A 86 GGKRTLRIPPELAYGDRGAGCKGGSCLIPPASVLLFDIEYIGK 128 (129)
T ss_dssp TCEEEEEECGGGTTGGGCEEEETTEEEECTTCCEEEEEEEEEE
T ss_pred CCEEEEEEChHHccCCCCCCccccCCcCCCCCeEEEEEEEEEe
Confidence 99999999999999952110 0112569999999999999987
No 17
>2f4e_A ATFKBP42; FKBP-like, alpha-beta, signaling protein; 2.32A {Arabidopsis thaliana}
Probab=99.97 E-value=4.1e-30 Score=172.97 Aligned_cols=118 Identities=20% Similarity=0.287 Sum_probs=106.0
Q ss_pred eeEcCCCcEEEEEEcCCCCCCCCCCEEEEEEEEEcC-CCCEEecccCCCccEEEEeCCC-CcchhHHHHhcCCCcCcEEE
Q 033143 4 MVTTESGLQYKDIKVGQGPSPPVGFQVAANYVAMIP-SGQIFDSSLEKGRPYIFRVGSG-QVVKGLDEGILTMKTGGKRR 81 (126)
Q Consensus 4 ~~~~~~g~~~~i~~~G~G~~~~~gd~V~v~y~~~~~-~g~~~~st~~~~~~~~~~~g~~-~~~~gl~~~l~~m~~G~~~~ 81 (126)
+.++++|++|+++++|+|..++.||.|++||++++. +|++|++++..+.|+.|.+|.+ ++++||+++|.+|++|++++
T Consensus 44 ~~~~~~gl~~~vl~~G~G~~~~~Gd~V~v~Y~g~l~~dG~~fdss~~~~~p~~f~lG~g~~vi~G~eeaL~gMk~Ge~~~ 123 (180)
T 2f4e_A 44 AEVLDEKVSKQIIKEGHGSKPSKYSTCFLHYRAWTKNSQHKFEDTWHEQQPIELVLGKEKKELAGLAIGVASMKSGERAL 123 (180)
T ss_dssp CEEEETTEEEEEEECCBSCCBCTTCEEEEEEEEEETTTCCEEEETTTTTCCEEEETTSCCGGGHHHHHHHTTCCBTCEEE
T ss_pred cEECCCceEEEEEeCCCCCCCCCCCEEEEEEEEEECCCCcEEeccCccCCCEEEEeCCCCchhHHHHHHHhCCCCCCEEE
Confidence 467899999999999999999999999999999988 6999999987778999999998 99999999999999999999
Q ss_pred EEEcCCCCCCCCCCCCCCCCCCCCCCceEEEEEEEeecCCCC
Q 033143 82 LYIPGPLAFPKGLVSAPGRPRVAPNSPVIFDVSLEYIPGLEA 123 (126)
Q Consensus 82 v~ip~~~ayg~~~~~~~~~~~ip~~~~l~~~i~l~~~~~~~~ 123 (126)
|.|||+++||..+. ...+.||||++|+|+|+|+++..+.+
T Consensus 124 v~iPp~~aYG~~g~--~~~~~Ip~~s~l~F~VeL~~v~~~~e 163 (180)
T 2f4e_A 124 VHVGWELAYGKEGN--FSFPNVPPMADLLYEVEVIGFDETKE 163 (180)
T ss_dssp EEECGGGTTTTTCB--SSSSCBCTTCCEEEEEEEEEESCBCC
T ss_pred EEECchHhCCcCCc--ccCCCcCCCCeEEEEEEEEEEecCcc
Confidence 99999999995211 01356999999999999999987664
No 18
>2vn1_A 70 kDa peptidylprolyl isomerase; FKBP, FK506, TPR repeat; HET: FK5; 2.35A {Plasmodium falciparum} PDB: 2ofn_A 2ki3_A 3ihz_A* 3ni6_A 3pa7_A
Probab=99.97 E-value=9.4e-30 Score=162.99 Aligned_cols=114 Identities=25% Similarity=0.436 Sum_probs=100.3
Q ss_pred eeEcCCCcEE-EEEEcC---CCCCCCCCCEEEEEEEEEc-CCCCEEecccCCCccEEEEeCCCCcchhHHHHhcCCCcCc
Q 033143 4 MVTTESGLQY-KDIKVG---QGPSPPVGFQVAANYVAMI-PSGQIFDSSLEKGRPYIFRVGSGQVVKGLDEGILTMKTGG 78 (126)
Q Consensus 4 ~~~~~~g~~~-~i~~~G---~G~~~~~gd~V~v~y~~~~-~~g~~~~st~~~~~~~~~~~g~~~~~~gl~~~l~~m~~G~ 78 (126)
+..+++|+.| +++++| +|..++.||.|++||++++ .||++|++++..+.|+.|.+|.+++++||+++|.+|++|+
T Consensus 10 ~~~~~~g~~~~~il~~G~~g~g~~~~~gd~V~v~Y~g~~~~dG~~fd~s~~~~~p~~f~lG~g~~i~g~e~~l~gm~~Ge 89 (129)
T 2vn1_A 10 VELTADGGVIKTILKKGDEGEENIPKKGNEVTVHYVGKLESTGKVFDSSFDRNVPFKFHLEQGEVIKGWDICVSSMRKNE 89 (129)
T ss_dssp EECSTTSSEEEEEEECCCCSGGGSCCTTCEEEEEEEEEETTTCCEEEEGGGTTCCEEEETTSSSSCHHHHHHHTTCCTTC
T ss_pred cEECCCCCEEEEEEeCCCCCCCCcCCCCCEEEEEEEEEECCCCeEEEecCCCCccEEEEeCCCCcCHHHHHHHhCCCCCC
Confidence 3456777766 588966 4577999999999999998 6999999998766899999999999999999999999999
Q ss_pred EEEEEEcCCCCCCCCCCCCCCCCCCCCCCceEEEEEEEeecCC
Q 033143 79 KRRLYIPGPLAFPKGLVSAPGRPRVAPNSPVIFDVSLEYIPGL 121 (126)
Q Consensus 79 ~~~v~ip~~~ayg~~~~~~~~~~~ip~~~~l~~~i~l~~~~~~ 121 (126)
+++|.|||+++||+ .+.++.||||++|+|+|+|++++.+
T Consensus 90 ~~~v~ip~~~aYG~----~~~~~~Ip~~~~l~f~vel~~v~~~ 128 (129)
T 2vn1_A 90 KCLVRIESMYGYGD----EGCGESIPGNSVLLFEIELLSFREL 128 (129)
T ss_dssp EEEEEECGGGTTTT----TCBTTTBCTTCCEEEEEEEEEEECC
T ss_pred EEEEEEChHHcCCC----CCCCCCcCCCCeEEEEEEEEEEecC
Confidence 99999999999996 3344579999999999999999864
No 19
>2jwx_A FKBP38NTD, FK506-binding protein 8 variant; apoptosis, beta barrel, central helix, with flexible N-terminal extension, isomerase; NMR {Homo sapiens}
Probab=99.97 E-value=9.1e-30 Score=167.71 Aligned_cols=110 Identities=19% Similarity=0.319 Sum_probs=100.1
Q ss_pred eEcCCCc-EEEEEEcCCCC--CCCCCCEEEEEEEEEcCCCCEEecccCCCccEEEEeCCCCcchhHHHHhcCCCcCcEEE
Q 033143 5 VTTESGL-QYKDIKVGQGP--SPPVGFQVAANYVAMIPSGQIFDSSLEKGRPYIFRVGSGQVVKGLDEGILTMKTGGKRR 81 (126)
Q Consensus 5 ~~~~~g~-~~~i~~~G~G~--~~~~gd~V~v~y~~~~~~g~~~~st~~~~~~~~~~~g~~~~~~gl~~~l~~m~~G~~~~ 81 (126)
..+++|+ +|+++++|+|. .++.||.|++||++++.||++|+++ .|+.|.+|.+++++||+++|.+|++|++++
T Consensus 38 ~~~~sG~v~~~vl~~G~G~~~~p~~gd~V~v~Y~g~l~dG~~fds~----~p~~f~lG~g~vi~G~eeaL~gMk~Ge~~~ 113 (157)
T 2jwx_A 38 DILGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLENGTRVQEE----PELVFTLGDCDVIQALDLSVPLMDVGETAM 113 (157)
T ss_dssp ESSSSSSEEEEEEECCSTTSCCCCTTEEEEEEEEEECTTSCEEEEE----EEEEEETTTTSSCHHHHHHTTTSCTTCEEE
T ss_pred eECCCCCEEEEEEEccCCCccCCCCCCEEEEEEEEEECCCCEeecC----CCEEEEeCCCChhHHHHHHHcCCCCCCEEE
Confidence 4678997 89999999997 7999999999999999899999985 799999999999999999999999999999
Q ss_pred EEEcCCCCCCCCCCCCC-CCCCCCCCCceEEEEEEEeecCCC
Q 033143 82 LYIPGPLAFPKGLVSAP-GRPRVAPNSPVIFDVSLEYIPGLE 122 (126)
Q Consensus 82 v~ip~~~ayg~~~~~~~-~~~~ip~~~~l~~~i~l~~~~~~~ 122 (126)
|+||++++||+ .+ ..+.||||++|+|+|+|++++...
T Consensus 114 v~IP~~~aYG~----~g~~~~~IPp~stLiF~VeL~~i~~~~ 151 (157)
T 2jwx_A 114 VTADSKYCYGP----QGSRSPYIPPHAALCLEVTLKTAVDLE 151 (157)
T ss_dssp EEECGGGTTTT----TCCSSSCCCTTCCEEEEEEEEEEEECS
T ss_pred EEECchhcCCc----ccccCCCcCCCCeEEEEEEEEEEEccc
Confidence 99999999996 33 345799999999999999987654
No 20
>2awg_A 38 kDa FK-506 binding protein; FKBP-type, ppiase, BCL-2 inhibitor, SHH signalling antagonist, structural genomics consortium, SGC; 1.60A {Homo sapiens} PDB: 2f2d_A 3ey6_A
Probab=99.97 E-value=1.8e-29 Score=159.38 Aligned_cols=107 Identities=18% Similarity=0.304 Sum_probs=97.7
Q ss_pred eEcCCC-cEEEEEEcCCCC--CCCCCCEEEEEEEEEcCCCCEEecccCCCccEEEEeCCCCcchhHHHHhcCCCcCcEEE
Q 033143 5 VTTESG-LQYKDIKVGQGP--SPPVGFQVAANYVAMIPSGQIFDSSLEKGRPYIFRVGSGQVVKGLDEGILTMKTGGKRR 81 (126)
Q Consensus 5 ~~~~~g-~~~~i~~~G~G~--~~~~gd~V~v~y~~~~~~g~~~~st~~~~~~~~~~~g~~~~~~gl~~~l~~m~~G~~~~ 81 (126)
..+++| ++|+++++|+|. .++.||.|++||++++.||++|+++ .|+.|.+|.+++++||+++|.+|++|++++
T Consensus 8 ~~~~~g~~~~~vl~~G~G~~~~~~~gd~V~v~y~g~~~dG~~~ds~----~p~~f~lG~~~~i~g~e~~l~gm~~Ge~~~ 83 (118)
T 2awg_A 8 DILGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLENGTRVQEE----PELVFTLGDCDVIQALDLSVPLMDVGETAM 83 (118)
T ss_dssp ESSSSSSEEEEEEECCCTTCCCCCTTSEEEEEEEEECTTSCEEEEE----EEEEEETTSSCSCHHHHHHGGGSCTTCEEE
T ss_pred EECCCCCEEEEEEEcCCCCCccCCCCCEEEEEEEEEECCCCEEECC----CCEEEEECCCChhHHHHHHHhCCCCCCEEE
Confidence 346777 999999999997 6999999999999999899999985 799999999999999999999999999999
Q ss_pred EEEcCCCCCCCCCCCCCCCCCCCCCCceEEEEEEEeec
Q 033143 82 LYIPGPLAFPKGLVSAPGRPRVAPNSPVIFDVSLEYIP 119 (126)
Q Consensus 82 v~ip~~~ayg~~~~~~~~~~~ip~~~~l~~~i~l~~~~ 119 (126)
+.+||++|||+ .+.++.||||++|+|+|+|++++
T Consensus 84 ~~ip~~~ayG~----~~~~~~Ip~~~~l~f~v~l~~v~ 117 (118)
T 2awg_A 84 VTADSKYCYGP----QGRSPYIPPHAALCLEVTLKTAV 117 (118)
T ss_dssp EEECGGGTTTT----TCBTTTBCTTCCEEEEEEEEEEE
T ss_pred EEEChHHccCC----CCCCCccCCCCeEEEEEEEEEec
Confidence 99999999996 33346799999999999999985
No 21
>1q6h_A FKBP-type peptidyl-prolyl CIS-trans isomerase FKP; chaperone, peptidyl-prolyl isomerase, heat shock protein, FK family; HET: MSE; 1.97A {Escherichia coli} SCOP: d.26.1.1 PDB: 1q6i_A* 1q6u_A
Probab=99.97 E-value=1.7e-29 Score=174.77 Aligned_cols=109 Identities=37% Similarity=0.637 Sum_probs=100.1
Q ss_pred eeEcCCCcEEEEEEcCCCCCCCCCCEEEEEEEEEcCCCCEEecccCCCccEEEEeCCCCcchhHHHHhcCCCcCcEEEEE
Q 033143 4 MVTTESGLQYKDIKVGQGPSPPVGFQVAANYVAMIPSGQIFDSSLEKGRPYIFRVGSGQVVKGLDEGILTMKTGGKRRLY 83 (126)
Q Consensus 4 ~~~~~~g~~~~i~~~G~G~~~~~gd~V~v~y~~~~~~g~~~~st~~~~~~~~~~~g~~~~~~gl~~~l~~m~~G~~~~v~ 83 (126)
+.++++|++|+++++|+|..|+.||.|++||++++.||++|++++.++.|+.|.+ +++++||+++|.+|++|++++|+
T Consensus 116 v~~~~sGl~y~vl~~G~G~~p~~gD~V~V~Y~g~l~dG~vfdss~~~g~p~~f~l--g~vI~G~eeaL~gMk~Gek~~v~ 193 (224)
T 1q6h_A 116 VKTSSTGLVYQVVEAGKGEAPKDSDTVVVNYKGTLIDGKEFDNSYTRGEPLSFRL--DGVIPGWTEGLKNIKKGGKIKLV 193 (224)
T ss_dssp EEECTTSCEEEEEECCSSCCCCTTCEEEEEEEEEETTSCEEEEGGGGTSCEEEEG--GGSCHHHHHHGGGSCTTCEEEEE
T ss_pred eEECCCceEEEEEecccCccccCCCEEEEEEEEEeCCCCEEeeccccCCCEEEEc--CCcchhHHHHHcCCCCCCEEEEE
Confidence 4678999999999999999999999999999999989999999987778999999 58999999999999999999999
Q ss_pred EcCCCCCCCCCCCCCCCCCCCCCCceEEEEEEEeec
Q 033143 84 IPGPLAFPKGLVSAPGRPRVAPNSPVIFDVSLEYIP 119 (126)
Q Consensus 84 ip~~~ayg~~~~~~~~~~~ip~~~~l~~~i~l~~~~ 119 (126)
|||+++||+ .+.+ .||||++|+|+|+|++++
T Consensus 194 IP~~laYG~----~g~~-~IPp~stLiF~VeL~~ik 224 (224)
T 1q6h_A 194 IPPELAYGK----AGVP-GIPPNSTLVFDVELLDVK 224 (224)
T ss_dssp ECGGGTTTT----TCBT-TBCTTCCEEEEEEEEEEC
T ss_pred ECchhhcCc----CCCC-CCCCCCEEEEEEEEEEeC
Confidence 999999995 3323 399999999999999874
No 22
>2d9f_A FK506-binding protein 8 variant; FKBP, rapamycin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.96 E-value=1.7e-29 Score=162.93 Aligned_cols=113 Identities=18% Similarity=0.279 Sum_probs=101.6
Q ss_pred eEcCCC-cEEEEEEcCCCC--CCCCCCEEEEEEEEEcCCCCEEecccCCCccEEEEeCCCCcchhHHHHhcCCCcCcEEE
Q 033143 5 VTTESG-LQYKDIKVGQGP--SPPVGFQVAANYVAMIPSGQIFDSSLEKGRPYIFRVGSGQVVKGLDEGILTMKTGGKRR 81 (126)
Q Consensus 5 ~~~~~g-~~~~i~~~G~G~--~~~~gd~V~v~y~~~~~~g~~~~st~~~~~~~~~~~g~~~~~~gl~~~l~~m~~G~~~~ 81 (126)
..+++| ++|+++++|+|. .++.||.|++||++++.||++|+++ .|+.|.+|.+++++||+++|.+|++|++++
T Consensus 12 ~~~~~g~l~~~vl~~G~G~~~~~~~gd~V~v~Y~g~~~dG~~fds~----~p~~f~lG~g~~i~G~e~~L~gm~~Ge~~~ 87 (135)
T 2d9f_A 12 DILGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLENGTRVQEE----PELVFTLGDCDVIQALDLSVPLMDVGETAM 87 (135)
T ss_dssp ESSSSSSSEEEEEECCCSSCCCCCTTSEEEEEEEEEESSSCEEEEE----EEEEEETTSCCSCTTTTTTGGGSCTTCEEE
T ss_pred EECCCCCEEEEEEEcCCCCCccCCCCCEEEEEEEEEECCCCEEecC----CCEEEEeCCCChhHHHHHHHhCCCCCCEEE
Confidence 446777 999999999997 7999999999999999899999984 799999999999999999999999999999
Q ss_pred EEEcCCCCCCCCCCCCC-CCCCCCCCCceEEEEEEEeecCCCCCC
Q 033143 82 LYIPGPLAFPKGLVSAP-GRPRVAPNSPVIFDVSLEYIPGLEADE 125 (126)
Q Consensus 82 v~ip~~~ayg~~~~~~~-~~~~ip~~~~l~~~i~l~~~~~~~~~~ 125 (126)
|.+||+++||+ .. ..+.||||++|+|+|+|++++...+.+
T Consensus 88 v~ip~~~aYG~----~~~~~~~Ip~~~~l~f~vel~~v~~~~~~e 128 (135)
T 2d9f_A 88 VTADSKYCYGP----QGSRSPYIPPHAALCLEVTLKTAVDRPDLE 128 (135)
T ss_dssp EEECHHHHTCT----TCCSSSCCCTTCCEEEEEEEEEEESSCSSS
T ss_pred EEEChhHccCc----CCcCCCccCCCCeEEEEEEEEEeecCCchh
Confidence 99999999996 33 345799999999999999998876543
No 23
>2pbc_A FK506-binding protein 2; endoplasmic reticulum, isomerase, polymorphism, rotamase, structural genomics, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=99.95 E-value=1.5e-27 Score=146.92 Aligned_cols=98 Identities=33% Similarity=0.608 Sum_probs=89.2
Q ss_pred CCCCCCCCEEEEEEEEEcCCCCEEecccCCCccEEEEeCCCCcchhHHHHhcCCCcCcEEEEEEcCCCCCCCCCCCCCCC
Q 033143 21 GPSPPVGFQVAANYVAMIPSGQIFDSSLEKGRPYIFRVGSGQVVKGLDEGILTMKTGGKRRLYIPGPLAFPKGLVSAPGR 100 (126)
Q Consensus 21 G~~~~~gd~V~v~y~~~~~~g~~~~st~~~~~~~~~~~g~~~~~~gl~~~l~~m~~G~~~~v~ip~~~ayg~~~~~~~~~ 100 (126)
|..++.||.|++||++++.||++|++++..+.|+.|.+|.+++++||+++|.+|++|++++|.+||+++||+ .+..
T Consensus 3 g~~~~~gd~V~v~y~~~~~dG~~~d~s~~~~~p~~f~lG~~~~i~g~~~~l~gm~~Ge~~~v~ip~~~ayG~----~~~~ 78 (102)
T 2pbc_A 3 PIKSRKGDVLHMHYTGKLEDGTEFDSSLPQNQPFVFSLGTGQVIKGWDQGLLGMCEGEKRKLVIPSELGYGE----RGAP 78 (102)
T ss_dssp CCCCCTTCEEEEEEEEECTTSCEEEESTTTTCCEEEETTSSSSCHHHHTTSTTCCTTCEEEEEECGGGTTTT----TCBT
T ss_pred CCcCCCCCEEEEEEEEEECCCCEEEeCCCCCCCEEEEeCCCCccHHHHHHHhCCCCCCEEEEEECHHHCcCC----CCCC
Confidence 456899999999999998899999999876689999999999999999999999999999999999999996 3334
Q ss_pred CCCCCCCceEEEEEEEeecCCC
Q 033143 101 PRVAPNSPVIFDVSLEYIPGLE 122 (126)
Q Consensus 101 ~~ip~~~~l~~~i~l~~~~~~~ 122 (126)
+.||||++|+|+|+|++++++.
T Consensus 79 ~~Ip~~~~l~f~v~l~~v~~~~ 100 (102)
T 2pbc_A 79 PKIPGGATLVFEVELLKIERRT 100 (102)
T ss_dssp TTBCTTCCEEEEEEEEEEGGGC
T ss_pred CCcCcCCeEEEEEEEEEecccC
Confidence 5799999999999999998754
No 24
>1q1c_A FK506-binding protein 4; rotamase, TPR repeat, nuclear protein, phosphorylation, isomerase; 1.90A {Homo sapiens} SCOP: d.26.1.1 d.26.1.1 PDB: 1n1a_A 1rot_A 1rou_A
Probab=99.95 E-value=2.7e-27 Score=168.89 Aligned_cols=112 Identities=29% Similarity=0.503 Sum_probs=103.7
Q ss_pred EcCCCcEEEEEEcCCCCC-CCCCCEEEEEEEEEcCCCCEEecccCCCccEEEEeCCCCcchhHHHHhcCCCcCcEEEEEE
Q 033143 6 TTESGLQYKDIKVGQGPS-PPVGFQVAANYVAMIPSGQIFDSSLEKGRPYIFRVGSGQVVKGLDEGILTMKTGGKRRLYI 84 (126)
Q Consensus 6 ~~~~g~~~~i~~~G~G~~-~~~gd~V~v~y~~~~~~g~~~~st~~~~~~~~~~~g~~~~~~gl~~~l~~m~~G~~~~v~i 84 (126)
++++|++|+++++|+|.. |+.||.|++||++++.||++|++++..+.|+.|.+|.+++++||+++|.+|++|++++|.|
T Consensus 48 ~~~~gl~~~vl~~G~G~~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~g~vi~G~e~aL~gm~~Ge~~~v~i 127 (280)
T 1q1c_A 48 KQDEGVLKVIKREGTGTEMPMIGDRVFVHYTGWLLDGTKFDSSLDRKDKFSFDLGKGEVIKAWDIAIATMKVGEVCHITC 127 (280)
T ss_dssp SCSSSEEEEEEECCSSSCCCCTTCEEEEEEEEEETTSCEEEESTTSSSCEEEETTTTSSCHHHHHHHTTCCTTCEEEEEE
T ss_pred CCCCceEEEEEeCCCCCcCCCCCCEEEEEEEEEECCCCEEEecccCCCCEEEEECCcChhHHHHHHHhcCCCCCEEEEEE
Confidence 368999999999999988 9999999999999998999999998767899999999999999999999999999999999
Q ss_pred cCCCCCCCCCCCCCCCCCCCCCCceEEEEEEEeecCC
Q 033143 85 PGPLAFPKGLVSAPGRPRVAPNSPVIFDVSLEYIPGL 121 (126)
Q Consensus 85 p~~~ayg~~~~~~~~~~~ip~~~~l~~~i~l~~~~~~ 121 (126)
||++|||+ .+.++.||+|++|+|+|+|+++...
T Consensus 128 pp~~aYG~----~g~~~~Ip~~~~lvf~Vel~~i~~~ 160 (280)
T 1q1c_A 128 KPEYAYGS----AGSPPKIPPNATLVFEVELFEFKGE 160 (280)
T ss_dssp CGGGTTTT----TCBTTTBCTTCCEEEEEEEEEEECE
T ss_pred CcHHhCCC----cCccCCCCCCCcEEEEEEeeeeccc
Confidence 99999996 3445679999999999999998764
No 25
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.94 E-value=1.3e-26 Score=174.37 Aligned_cols=112 Identities=30% Similarity=0.552 Sum_probs=82.9
Q ss_pred EcCCCcEEEEEEcCCCCC-CCCCCEEEEEEEEEcCCCCEEecccCCCccEEEEeCCCCcchhHHHHhcCCCcCcEEEEEE
Q 033143 6 TTESGLQYKDIKVGQGPS-PPVGFQVAANYVAMIPSGQIFDSSLEKGRPYIFRVGSGQVVKGLDEGILTMKTGGKRRLYI 84 (126)
Q Consensus 6 ~~~~g~~~~i~~~G~G~~-~~~gd~V~v~y~~~~~~g~~~~st~~~~~~~~~~~g~~~~~~gl~~~l~~m~~G~~~~v~i 84 (126)
++++|++|+++++|+|.. |+.||.|+|||++++.||++|++++..+.|+.|.+|.+++++||+++|.+|++|++++|.|
T Consensus 28 ~~~~g~~~~~~~~G~g~~~~~~gd~v~v~y~~~~~~g~~~dss~~~~~p~~~~~g~~~~i~g~~~~l~~m~~Ge~~~~~i 107 (457)
T 1kt0_A 28 KKDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNGKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVATMKRGEICHLLC 107 (457)
T ss_dssp -----CEEEC--------CCCBTCEEEEEEEEEC-----CBC------CEEEETTSTTSCHHHHHHHTTCCTTCEEEEEE
T ss_pred CCCCcEEEEEEECCCCCCCCCCCCEEEEEEEEEECCCCEEeccCCCCCCeEEEeCCcchhhHHHHHHhhCCCCCEEEEEE
Confidence 478999999999999988 9999999999999998999999998777899999999999999999999999999999999
Q ss_pred cCCCCCCCCCCCCCCCCCCCCCCceEEEEEEEeecCC
Q 033143 85 PGPLAFPKGLVSAPGRPRVAPNSPVIFDVSLEYIPGL 121 (126)
Q Consensus 85 p~~~ayg~~~~~~~~~~~ip~~~~l~~~i~l~~~~~~ 121 (126)
||+++||+ .+.++.||+|++|+|+|+|+++...
T Consensus 108 ~~~~~yg~----~g~~~~i~~~~~l~~~v~l~~~~~~ 140 (457)
T 1kt0_A 108 KPEYAYGS----AGSLPKIPSNATLFFEIELLDFKGE 140 (457)
T ss_dssp CGGGTTTT----TCBTTTBCTTCCEEEEEEEEEEECE
T ss_pred ChHHhccc----cCCCCCCCCCCcEEEEEeeceeecc
Confidence 99999996 4445689999999999999998754
No 26
>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A
Probab=99.93 E-value=4.4e-28 Score=177.99 Aligned_cols=114 Identities=35% Similarity=0.595 Sum_probs=1.8
Q ss_pred eeEcCCCcEEEEEEcCCC-CCCCCCCEEEEEEEEEcCCCCEEecccCCCccEEEEeCCCCcchhHHHHhcCCCcCcEEEE
Q 033143 4 MVTTESGLQYKDIKVGQG-PSPPVGFQVAANYVAMIPSGQIFDSSLEKGRPYIFRVGSGQVVKGLDEGILTMKTGGKRRL 82 (126)
Q Consensus 4 ~~~~~~g~~~~i~~~G~G-~~~~~gd~V~v~y~~~~~~g~~~~st~~~~~~~~~~~g~~~~~~gl~~~l~~m~~G~~~~v 82 (126)
...+++|++|+++++|+| ..|+.||.|++||++++.||++|++++..+.|+.|.+|.+++++||+++|.+|++|+++++
T Consensus 6 ~~~~~~Gl~~~i~~~G~G~~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~~~lG~g~~i~g~e~~l~gm~~Ge~~~~ 85 (356)
T 3jxv_A 6 NEIGKQGLKKKLLKEGEGWDTPEVGDEVEVHYTGTLLDGKKFDSSRDRDDTFKFKLGQGQVIKGWDQGIKTMKKGENALF 85 (356)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ceECCCCeEEEEEEeecCCccCCCCCEEEEEEEEEECCCCEEEEcccCCCcEEEEeCCCccchHHHHHHhcCCCCCEEEE
Confidence 456899999999999999 5699999999999999999999999988778999999999999999999999999999999
Q ss_pred EEcCCCCCCCCCCCCCCCCCCCCCCceEEEEEEEeecCC
Q 033143 83 YIPGPLAFPKGLVSAPGRPRVAPNSPVIFDVSLEYIPGL 121 (126)
Q Consensus 83 ~ip~~~ayg~~~~~~~~~~~ip~~~~l~~~i~l~~~~~~ 121 (126)
.|||++|||+ .+..+.||||++|+|+|+|+++...
T Consensus 86 ~ip~~~aYG~----~g~~~~Ip~~~~l~f~vel~~~~~~ 120 (356)
T 3jxv_A 86 TIPPELAYGE----SGSPPTIPANATLQFDVELLSWTSV 120 (356)
T ss_dssp ------------------------------------CCE
T ss_pred EEChHHhCCC----CCCCCCcCCCCEEEEEeeEEeeecc
Confidence 9999999996 4445689999999999999998764
No 27
>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A
Probab=99.93 E-value=3.7e-25 Score=162.47 Aligned_cols=112 Identities=26% Similarity=0.419 Sum_probs=100.1
Q ss_pred cCCCcEEEEEEcCCC-CCCCCCCEEEEEEEEEcCCCCEEeccc-CCCccEEEEeCCCCcchhHHHHhcCCCcCcEEEEEE
Q 033143 7 TESGLQYKDIKVGQG-PSPPVGFQVAANYVAMIPSGQIFDSSL-EKGRPYIFRVGSGQVVKGLDEGILTMKTGGKRRLYI 84 (126)
Q Consensus 7 ~~~g~~~~i~~~G~G-~~~~~gd~V~v~y~~~~~~g~~~~st~-~~~~~~~~~~g~~~~~~gl~~~l~~m~~G~~~~v~i 84 (126)
.+++++++++++|+| ..|+.||.|++||++++.||++|+++. ..+.|+.|.+|.+++++||+++|.+|++|++++|.|
T Consensus 242 ~d~~~~~~i~~~g~g~~~~~~gd~V~v~y~g~l~dG~~fd~~~~~~~~p~~f~~G~g~~i~G~e~~l~gm~~Ge~~~v~i 321 (356)
T 3jxv_A 242 DDKKILKKVLKEXEGYERPNEGAVVTVKITGKLQDGTVFLKKGHDEQEPFEFKTDEEAVIEGLDRAVLNMKKGEVALVTI 321 (356)
T ss_dssp TTCCEEEEEEECCBSSCCCCTTCEEEEEEEEEESSSCEEEEESCTTSCCCEEETTTTSSCHHHHHHHTTCCBTCEEEEEE
T ss_pred cccceeEEeeecccccCCCCCCCEEEEEEEEEECCCCEEeeccccCCcCEEEEECCCccchHHHHHHhCCCCCCEEEEEE
Confidence 578999999999999 569999999999999999999999984 456899999999999999999999999999999999
Q ss_pred cCCCCCCCCCCCCCCCCCCCCCCceEEEEEEEeecC
Q 033143 85 PGPLAFPKGLVSAPGRPRVAPNSPVIFDVSLEYIPG 120 (126)
Q Consensus 85 p~~~ayg~~~~~~~~~~~ip~~~~l~~~i~l~~~~~ 120 (126)
||++|||+.. ....+.||||++|+|+|+|+++++
T Consensus 322 p~~~aYG~~~--~~~~~~Ip~~~~l~f~vel~~~~~ 355 (356)
T 3jxv_A 322 PPEYAYGSTE--SKQDAIVPPNSTVIYEVELVSFVK 355 (356)
T ss_dssp CGGGTTTTSC--EESSSEECTTCCEEEEEEEEEEEC
T ss_pred ChHHccCCCC--cCCCCcCCcCCeEEEEEEEEEEEc
Confidence 9999999521 112356999999999999999875
No 28
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.93 E-value=2.2e-25 Score=162.00 Aligned_cols=117 Identities=21% Similarity=0.295 Sum_probs=104.1
Q ss_pred eeEcCCCcEEEEEEcCCCCCCCCCCEEEEEEEEEcC-CCCEEecccCCCccEEEEeCCC-CcchhHHHHhcCCCcCcEEE
Q 033143 4 MVTTESGLQYKDIKVGQGPSPPVGFQVAANYVAMIP-SGQIFDSSLEKGRPYIFRVGSG-QVVKGLDEGILTMKTGGKRR 81 (126)
Q Consensus 4 ~~~~~~g~~~~i~~~G~G~~~~~gd~V~v~y~~~~~-~g~~~~st~~~~~~~~~~~g~~-~~~~gl~~~l~~m~~G~~~~ 81 (126)
+.++++|++|+++++|+|..|..||.|+|||++++. +|++|++++..+.|+.|.+|.+ ++++||+++|.+|++|++++
T Consensus 44 ~~~~~~~~~~~~~~~g~g~~~~~gd~v~v~y~g~~~~~g~~fd~~~~~~~~~~~~lg~~~~~i~g~e~~l~~m~~Ge~~~ 123 (338)
T 2if4_A 44 AEVLDEKVSKQIIKEGHGSKPSKYSTCFLHYRAWTKNSQHKFEDTWHEQQPIELVLGKEKKELAGLAIGVASMKSGERAL 123 (338)
T ss_dssp CEEEETTEEEEEEECCBSCCCCTTCEEEEEEEEEETTTCCCCEEHHHHTCCEEEETTSCCGGGHHHHHHHHHCCBTCEEE
T ss_pred ceeCCCCeEEEEEeCCCCCCCCCCCEEEEEEEEEEcCCCcEeecccCCCCCeEEEcCCCCcccHHHHHHHhcCCCCCeEE
Confidence 467899999999999999999999999999999988 4999999976668999999998 89999999999999999999
Q ss_pred EEEcCCCCCCCCCCCCCCCCCCCCCCceEEEEEEEeecCCC
Q 033143 82 LYIPGPLAFPKGLVSAPGRPRVAPNSPVIFDVSLEYIPGLE 122 (126)
Q Consensus 82 v~ip~~~ayg~~~~~~~~~~~ip~~~~l~~~i~l~~~~~~~ 122 (126)
|.|||.++||..+ ....+.||++++++|+|+|.++....
T Consensus 124 ~~i~~~~~yg~~~--~~~~~~ip~~~~l~f~v~L~~~~~~~ 162 (338)
T 2if4_A 124 VHVGWELAYGKEG--NFSFPNVPPMADLLYEVEVIGFDETK 162 (338)
T ss_dssp EEECGGGSSCSSC--CCSSSCCCTTCCEEEEEEEEEEECCC
T ss_pred EEECHHHhcCCCC--CCCCCCCCCCCcEEEEEEEEEecCCc
Confidence 9999999999521 11136799999999999999987654
No 29
>1q1c_A FK506-binding protein 4; rotamase, TPR repeat, nuclear protein, phosphorylation, isomerase; 1.90A {Homo sapiens} SCOP: d.26.1.1 d.26.1.1 PDB: 1n1a_A 1rot_A 1rou_A
Probab=99.90 E-value=6.6e-23 Score=146.20 Aligned_cols=107 Identities=21% Similarity=0.427 Sum_probs=95.7
Q ss_pred cCCCcEEEEEEcCCCCC-CCCCCEEEEEEEEEcCCCCEEecccCCCccEEEEeCCCC---cchhHHHHhcCCCcCcEEEE
Q 033143 7 TESGLQYKDIKVGQGPS-PPVGFQVAANYVAMIPSGQIFDSSLEKGRPYIFRVGSGQ---VVKGLDEGILTMKTGGKRRL 82 (126)
Q Consensus 7 ~~~g~~~~i~~~G~G~~-~~~gd~V~v~y~~~~~~g~~~~st~~~~~~~~~~~g~~~---~~~gl~~~l~~m~~G~~~~v 82 (126)
.++|++|+++++|+|.. ++.||.|++||++++ ||++|++ .++.|.+|.++ +++||+++|.+|++|++++|
T Consensus 166 ~d~gl~~~il~~G~G~~~~~~gd~V~i~y~g~~-dG~~fd~-----~~~~f~lG~g~~~~~i~G~e~~l~gmk~Ge~~~v 239 (280)
T 1q1c_A 166 EDGGIIRRIQTRGEGYAKPNEGAIVEVALEGYY-KDKLFDQ-----RELRFEIGEGENLDLPYGLERAIQRMEKGEHSIV 239 (280)
T ss_dssp CSSSEEEEEEECCSCSCCCCTTCEEEEEEEEEE-TTEEEEE-----EEEEEETTCGGGGTCCHHHHHHHTTCCTTCEEEE
T ss_pred cccceeEEeeecccccccccCCceEEEEEEEEe-CCEEEec-----CCeEEEecCCcccccchhHHHHHhCCCCCcEEEE
Confidence 67899999999999984 999999999999998 9999997 38999999887 59999999999999999999
Q ss_pred EEcCCCCCCCCCCCCCCCC-CCCCCCceEEEEEEEeecCCCC
Q 033143 83 YIPGPLAFPKGLVSAPGRP-RVAPNSPVIFDVSLEYIPGLEA 123 (126)
Q Consensus 83 ~ip~~~ayg~~~~~~~~~~-~ip~~~~l~~~i~l~~~~~~~~ 123 (126)
.+||+++||+ .+.+. .||+|++|+|+|+|++++.+.+
T Consensus 240 ~ip~~~~yG~----~~~~~~~IP~~~~l~f~V~L~~i~~~~~ 277 (280)
T 1q1c_A 240 YLKPSYAFGS----VGKEKFQIPPNAELKYELHLKSFEKAKE 277 (280)
T ss_dssp EECGGGTTTT----TCBGGGTBCTTCCEEEEEEEEEEECCCC
T ss_pred EEChhHcCCc----CCCccCccCCCCeEEEEEEEEEEeCCCC
Confidence 9999999985 22223 4999999999999999987764
No 30
>4dt4_A FKBP-type 16 kDa peptidyl-prolyl CIS-trans isomer; FKBP domain, IF domain, chaperone, peptidyl-prolyl isomerase isomerase; 1.35A {Escherichia coli}
Probab=99.85 E-value=7.4e-21 Score=126.25 Aligned_cols=70 Identities=24% Similarity=0.455 Sum_probs=66.6
Q ss_pred CCCCCCEEEEEEEEEcCCCCEEecccCCCccEEEEeCCCCcchhHHHHhcCCCcCcEEEEEEcCCCCCCC
Q 033143 23 SPPVGFQVAANYVAMIPSGQIFDSSLEKGRPYIFRVGSGQVVKGLDEGILTMKTGGKRRLYIPGPLAFPK 92 (126)
Q Consensus 23 ~~~~gd~V~v~y~~~~~~g~~~~st~~~~~~~~~~~g~~~~~~gl~~~l~~m~~G~~~~v~ip~~~ayg~ 92 (126)
.++.||.|++||++++.||++|++++..+.|+.|.+|.+++++||+++|.+|++|++++|.|||++|||+
T Consensus 24 ~i~~gd~V~v~Y~g~l~dG~vfDss~~~~~P~~f~lG~g~vipG~eeaL~gm~~Ge~~~v~Ipp~~AYG~ 93 (169)
T 4dt4_A 24 SVQSNSAVLVHFTLKLDDGTTAESTRNNGKPALFRLGDASLSEGLEQHLLGLKVGDKTTFSLEPDAAFGV 93 (169)
T ss_dssp SCCTTCEEEEEEEEEETTSCEEEEHHHHTSCEEEETTSSSSCHHHHHHHTTCCTTCEEEEEECGGGTTCC
T ss_pred cCCCCCEEEEEEEEEECCCCEEEecCCCCCCEEEEECCCCccHHHHHHHcCCCCCCEEEEEEChHHhcCC
Confidence 5899999999999999999999999866679999999999999999999999999999999999999996
No 31
>2k8i_A SLYD, peptidyl-prolyl CIS-trans isomerase; ppiase, chaperone, rotamase; NMR {Escherichia coli}
Probab=99.83 E-value=8.2e-20 Score=121.63 Aligned_cols=68 Identities=19% Similarity=0.300 Sum_probs=64.4
Q ss_pred CCCCCEEEEEEEEEcCCCCEEecccCCCccEEEEeCCCCcchhHHHHhcCCCcCcEEEEEEcCCCCCCC
Q 033143 24 PPVGFQVAANYVAMIPSGQIFDSSLEKGRPYIFRVGSGQVVKGLDEGILTMKTGGKRRLYIPGPLAFPK 92 (126)
Q Consensus 24 ~~~gd~V~v~y~~~~~~g~~~~st~~~~~~~~~~~g~~~~~~gl~~~l~~m~~G~~~~v~ip~~~ayg~ 92 (126)
++.||.|+++|++++.+|++|++++.. .|+.|.+|.+++++||+++|.+|++|++++|.|||+.|||+
T Consensus 3 i~~gd~V~v~Y~g~~~dG~~fdss~~~-~P~~f~lG~g~vipG~eeaL~Gm~~Ge~~~v~ippe~aYG~ 70 (171)
T 2k8i_A 3 VAKDLVVSLAYQVRTEDGVLVDESPVS-APLDYLHGHGSLISGLETALEGHEVGDKFDVAVGANDAYGQ 70 (171)
T ss_dssp CCTTEEEEEEEEEEETTSCEEEECCSS-SCEEEETTSCSSCSHHHHHHTTCCTTCEEEEEEETTTSSCC
T ss_pred CCCCCEEEEEEEEEECCCCEEeeccCC-cCEEEEECCCCcchHHHHHHcCCCCCCEEEEEECcHHhcCC
Confidence 789999999999998899999999753 69999999999999999999999999999999999999996
No 32
>1hxv_A Trigger factor; FKBP fold, ppiase, chaperone; NMR {Mycoplasma genitalium} SCOP: d.26.1.1
Probab=99.83 E-value=2.6e-20 Score=116.47 Aligned_cols=87 Identities=22% Similarity=0.418 Sum_probs=74.6
Q ss_pred CCCCCCCCEEEEEEEEEcCCCCEEecccCCCccEEEEeCCCCcchhHHHHhcCCCcCcEEEEEEcCCCCCCCCCCCCCCC
Q 033143 21 GPSPPVGFQVAANYVAMIPSGQIFDSSLEKGRPYIFRVGSGQVVKGLDEGILTMKTGGKRRLYIPGPLAFPKGLVSAPGR 100 (126)
Q Consensus 21 G~~~~~gd~V~v~y~~~~~~g~~~~st~~~~~~~~~~~g~~~~~~gl~~~l~~m~~G~~~~v~ip~~~ayg~~~~~~~~~ 100 (126)
+..++.||.|+++|++++ ||++|++++ ..|+.|.+|.+++++||+++|.+|++|++++|.||....||. ..
T Consensus 27 ~~~~~~gD~V~v~Y~g~~-dG~~fdss~--~~p~~f~lG~g~vi~G~ee~L~Gmk~Ge~~~v~i~fP~~Yg~----~~-- 97 (113)
T 1hxv_A 27 DKKLANGDIAIIDFTGIV-DNKKLASAS--AQNYELTIGSNSFIKGFETGLIAMKVNQKKTLALTFPSDYHV----KE-- 97 (113)
T ss_dssp --CCCSSEEEEEEEEEEE-TTEECSTTC--CSEEEEEETSSCSCTTHHHHHHTSCSSEEEEECCCCCTTSSS----SG--
T ss_pred CCCCCCCCEEEEEEEEEE-CCEEcccCC--ccCEEEEECCCChhHHHHHHHCCCCCCCEEEEEEeCchhhCc----CC--
Confidence 456899999999999999 999999985 479999999999999999999999999999999963333984 11
Q ss_pred CCCCCCCceEEEEEEEeec
Q 033143 101 PRVAPNSPVIFDVSLEYIP 119 (126)
Q Consensus 101 ~~ip~~~~l~~~i~l~~~~ 119 (126)
.++++|+|+|+|++++
T Consensus 98 ---~~g~~l~F~V~l~~Vk 113 (113)
T 1hxv_A 98 ---LQSKPVTFEVVLKAIK 113 (113)
T ss_dssp ---GGSCCCEEEEEECCBC
T ss_pred ---CCCCEEEEEEEEEEEC
Confidence 4679999999999874
No 33
>2kr7_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLY; protein, rotamase; NMR {Helicobacter pylori}
Probab=99.82 E-value=1.6e-19 Score=118.16 Aligned_cols=70 Identities=20% Similarity=0.344 Sum_probs=65.5
Q ss_pred CCCCCCCEEEEEEEEEcC-CCCEEecccCCCccEEEEeCCCCcchhHHHHhcCCCcCcEEEEEEcCCCCCCC
Q 033143 22 PSPPVGFQVAANYVAMIP-SGQIFDSSLEKGRPYIFRVGSGQVVKGLDEGILTMKTGGKRRLYIPGPLAFPK 92 (126)
Q Consensus 22 ~~~~~gd~V~v~y~~~~~-~g~~~~st~~~~~~~~~~~g~~~~~~gl~~~l~~m~~G~~~~v~ip~~~ayg~ 92 (126)
..++.||.|++||++++. +|++|++++. ..|+.|.+|.+++++||+++|.+|++|+++.|.+||++|||+
T Consensus 5 ~~i~~gd~V~v~Y~g~~~~dG~~fdss~~-~~p~~f~~G~g~vipg~e~aL~gm~~Ge~~~v~ipp~~aYG~ 75 (151)
T 2kr7_A 5 DLESIKQAALIEYEVREQGSSIVLDSNIS-KEPLEFIIGTNQIIAGLEKAVLKAQIGEWEEVVIAPEEAYGV 75 (151)
T ss_dssp CCTTSCCEEEEEEEEEESSCSCEEEESTT-TCCEEEETTCCCSCHHHHHHHTTCCBTCEEEEEECGGGTTCS
T ss_pred cCCCCCCEEEEEEEEEECCCCCEEEeCCC-CcCEEEEECCCCccHHHHHHHcCCCCCCEEEEEEecHHHcCC
Confidence 348899999999999998 9999999975 369999999999999999999999999999999999999996
No 34
>3prb_A FKBP-type peptidyl-prolyl CIS-trans isomerase; chaperone; 2.20A {Methanocaldococcus jannaschii} PDB: 3prd_A
Probab=99.81 E-value=1e-19 Score=126.08 Aligned_cols=99 Identities=28% Similarity=0.396 Sum_probs=82.1
Q ss_pred CCCCCEEEEEEEEEcCCCCEEecccCC-------------CccEEEEeCCCCcchhHHHHhcCCCcCcEEEEEEcCCCCC
Q 033143 24 PPVGFQVAANYVAMIPSGQIFDSSLEK-------------GRPYIFRVGSGQVVKGLDEGILTMKTGGKRRLYIPGPLAF 90 (126)
Q Consensus 24 ~~~gd~V~v~y~~~~~~g~~~~st~~~-------------~~~~~~~~g~~~~~~gl~~~l~~m~~G~~~~v~ip~~~ay 90 (126)
++.||.|++||++++ ||++|++++.. +.|+.|.+|.+++++||+++|.+|++|+++++.|||++||
T Consensus 2 i~~Gd~V~v~Y~g~l-dG~vfDss~~~~A~e~gi~~~~~~~~P~~f~lG~g~vIpG~eeaL~Gm~vGek~~v~Ippe~AY 80 (231)
T 3prb_A 2 VEKGKMVKISYDGYV-DGKLFDTTNEELAKKEGIYNPAMIYGPVAIFAGEGQVLPGLDEAILEMDVGEEREVVLPPEKAF 80 (231)
T ss_dssp CCTTCEEEEEEEEEE-TTEEEEESCHHHHHHTTCCCTTSCCSCEEEETTSSSSCHHHHHHHHTCCTTCEEEEEECGGGTT
T ss_pred CCCCCEEEEEEEEEE-CCEEEEeccchhcccccccccccCCCCEEEEeCCCcHHHHHHHHHcCCCCCCEEEEEeCcHHhc
Confidence 678999999999999 99999998742 3699999999999999999999999999999999999999
Q ss_pred CCCCCC------------CC----------------------------CCCCCCCCCceEEEEEEEeecCCCC
Q 033143 91 PKGLVS------------AP----------------------------GRPRVAPNSPVIFDVSLEYIPGLEA 123 (126)
Q Consensus 91 g~~~~~------------~~----------------------------~~~~ip~~~~l~~~i~l~~~~~~~~ 123 (126)
|+.... .+ ..+.-.++.+|.|+++|+++++..+
T Consensus 81 Ge~~~~lv~~vp~~~f~~~~~~~~vG~~~~~~~~~g~V~~v~~~~V~vD~NHPLAGk~L~F~vev~~v~eat~ 153 (231)
T 3prb_A 81 GKRDPSKIKLIPLSEFTKRGIKPIKGLTITIDGIPGKIVSINSGRVLVDFNHELAGKEVKYRIKIEEVVDDKK 153 (231)
T ss_dssp CCCCGGGEEEEETHHHHTTTCCCCTTCEEEETTEEEEEEEEETTEEEEECSCTTTTCCEEEEEEEEEECCSHH
T ss_pred CCCChHHEEecCHHHCCcccCCCCCCcEEEecCCCEEEEEEcCCEEEEeCCCccCCCEEEEEEEEEEEecCCH
Confidence 962110 00 0011237899999999999987654
No 35
>2kfw_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLYD; protein, cobalt, copper, cytoplasm, metal- binding, nickel, rotamase, zinc; NMR {Escherichia coli}
Probab=99.81 E-value=2.1e-19 Score=121.90 Aligned_cols=69 Identities=19% Similarity=0.296 Sum_probs=64.8
Q ss_pred CCCCCCEEEEEEEEEcCCCCEEecccCCCccEEEEeCCCCcchhHHHHhcCCCcCcEEEEEEcCCCCCCC
Q 033143 23 SPPVGFQVAANYVAMIPSGQIFDSSLEKGRPYIFRVGSGQVVKGLDEGILTMKTGGKRRLYIPGPLAFPK 92 (126)
Q Consensus 23 ~~~~gd~V~v~y~~~~~~g~~~~st~~~~~~~~~~~g~~~~~~gl~~~l~~m~~G~~~~v~ip~~~ayg~ 92 (126)
.++++|.|+++|++++.||++|++++.. .|+.|.+|.+++++||+++|.+|++|++++|.|||++|||+
T Consensus 2 ~i~~gd~V~v~Y~g~~~dG~~fdss~~~-~P~~f~lG~g~vipG~eeaL~Gm~vGe~~~v~Ippe~aYGe 70 (196)
T 2kfw_A 2 KVAKDLVVSLAYQVRTEDGVLVDESPVS-APLDYLHGHGSLISGLETALEGHEVGDKFDVAVGANDAYGQ 70 (196)
T ss_dssp CCCSSCEEEEEEEEEETTTEEEEECCTT-SCCEEESSSSSSCHHHHHHHSSSCTTCEEEEECSTTTTSSC
T ss_pred CCCCCCEEEEEEEEEECCCCEEEecCCC-CCEEEEECCCCcchHHHHHHcCCCCCCEEEEEeCcHHhcCC
Confidence 3789999999999998899999999753 69999999999999999999999999999999999999996
No 36
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.79 E-value=2.4e-18 Score=124.72 Aligned_cols=108 Identities=20% Similarity=0.409 Sum_probs=95.5
Q ss_pred eEcCCCcEEEEEEcCCCC-CCCCCCEEEEEEEEEcCCCCEEecccCCCccEEEEeCCCC---cchhHHHHhcCCCcCcEE
Q 033143 5 VTTESGLQYKDIKVGQGP-SPPVGFQVAANYVAMIPSGQIFDSSLEKGRPYIFRVGSGQ---VVKGLDEGILTMKTGGKR 80 (126)
Q Consensus 5 ~~~~~g~~~~i~~~G~G~-~~~~gd~V~v~y~~~~~~g~~~~st~~~~~~~~~~~g~~~---~~~gl~~~l~~m~~G~~~ 80 (126)
.+.++|+.++++++|+|. .|..|+.|+|||++++ +|++||++ |+.|.+|.+. ++++|++|+..|+.|+++
T Consensus 21 ~~~~~~~~~~~~~~g~g~~~p~~~~~v~v~y~g~~-~g~~fd~~-----~~~f~lG~g~~~~~~~~~e~al~~~~~Ge~~ 94 (336)
T 1p5q_A 21 MEEDGGIIRRIQTRGEGYAKPNEGAIVEVALEGYY-KDKLFDQR-----ELRFEIGEGENLDLPYGLERAIQRMEKGEHS 94 (336)
T ss_dssp -CCTTSEEEEEEECCCCSCCCCTTCEEEEEEEEEE-TTEEEEEE-----EEEEETTCGGGGTCCHHHHHHHTTCCTTCEE
T ss_pred ecCCCcEEEEEEeCCCCCCCCCCCCeEEEEEEEEE-CCEEEecC-----CeEEEeCCCCccccchHHHHHHhcCCCCCeE
Confidence 467899999999999998 5999999999999999 99999997 8999999876 589999999999999999
Q ss_pred EEEEcCCCCCCCCCCCCCCCC-CCCCCCceEEEEEEEeecCCC
Q 033143 81 RLYIPGPLAFPKGLVSAPGRP-RVAPNSPVIFDVSLEYIPGLE 122 (126)
Q Consensus 81 ~v~ip~~~ayg~~~~~~~~~~-~ip~~~~l~~~i~l~~~~~~~ 122 (126)
.+.++|+++||. .+... .||+++++.|++++.++....
T Consensus 95 ~l~i~p~~ayg~----~g~~~~~i~~~~~l~f~~~L~~~~~A~ 133 (336)
T 1p5q_A 95 IVYLKPSYAFGS----VGKEKFQIPPNAELKYELHLKSFEKAK 133 (336)
T ss_dssp EEEECTTTTTTT----TCBGGGTBCSSCCEEEEEEEEEEECCC
T ss_pred EEEECCccccCc----CCCCccCCCCCCeEEEEEEEeeccccc
Confidence 999999999985 22222 599999999999999987653
No 37
>3pr9_A FKBP-type peptidyl-prolyl CIS-trans isomerase; FKBP protein, chaperone; 1.95A {Methanocaldococcus jannaschii} SCOP: d.26.1.0 PDB: 3pra_A
Probab=99.78 E-value=3.9e-19 Score=116.80 Aligned_cols=68 Identities=37% Similarity=0.584 Sum_probs=63.7
Q ss_pred CCCCCEEEEEEEEEcCCCCEEecccCC-------------CccEEEEeCCCCcchhHHHHhcCCCcCcEEEEEEcCCCCC
Q 033143 24 PPVGFQVAANYVAMIPSGQIFDSSLEK-------------GRPYIFRVGSGQVVKGLDEGILTMKTGGKRRLYIPGPLAF 90 (126)
Q Consensus 24 ~~~gd~V~v~y~~~~~~g~~~~st~~~-------------~~~~~~~~g~~~~~~gl~~~l~~m~~G~~~~v~ip~~~ay 90 (126)
++.||.|++||++++ ||++|++|+.. +.|+.|.+|.+++++||++||.+|++|+++++.|||++||
T Consensus 2 i~~Gd~V~v~Y~g~l-dG~vfDss~~~~a~~~g~~~~~~~~~P~~f~vG~g~vi~G~eeaL~gm~~Ge~~~v~Ipp~~aY 80 (157)
T 3pr9_A 2 VEKGKMVKISYDGYV-DGKLFDTTNEELAKKEGIYNPAMIYGPVAIFAGEGQVLPGLDEAILEMDVGEEREVVLPPEKAF 80 (157)
T ss_dssp CCTTCEEEEEEEEEE-TTEEEEESCHHHHHHHTCCCTTSCCSCEEEETTSSSSCHHHHHHHHHCCTTCEEEEEECGGGTT
T ss_pred CCCCCEEEEEEEEEE-CCEEEEeccccccccccccccccCCCCEEEEECCCcHHHHHHHHHcCCCCCCEEEEEECcHHhc
Confidence 688999999999999 99999998752 3699999999999999999999999999999999999999
Q ss_pred CC
Q 033143 91 PK 92 (126)
Q Consensus 91 g~ 92 (126)
|+
T Consensus 81 G~ 82 (157)
T 3pr9_A 81 GK 82 (157)
T ss_dssp CC
T ss_pred CC
Confidence 95
No 38
>1ix5_A FKBP; ppiase, isomerase; NMR {Methanothermococcusthermolithotrophicus} SCOP: d.26.1.1
Probab=99.76 E-value=5.1e-19 Score=115.74 Aligned_cols=69 Identities=32% Similarity=0.694 Sum_probs=64.3
Q ss_pred CCCCCEEEEEEEEEcCCCCEEecccC-------------CCccEEEEeCCCCcchhHHHHhcCCCcCcEEEEEEcCCCCC
Q 033143 24 PPVGFQVAANYVAMIPSGQIFDSSLE-------------KGRPYIFRVGSGQVVKGLDEGILTMKTGGKRRLYIPGPLAF 90 (126)
Q Consensus 24 ~~~gd~V~v~y~~~~~~g~~~~st~~-------------~~~~~~~~~g~~~~~~gl~~~l~~m~~G~~~~v~ip~~~ay 90 (126)
++.||.|++||++++.||++|++++. ...|+.|.+|.+++++||+++|.+|++|+++++.+||++||
T Consensus 2 i~~gd~V~v~Y~g~~~dG~~fdss~~~~a~~~g~~~~~~~~~P~~f~~G~g~vi~G~eeaL~gm~~Ge~~~v~ipp~~aY 81 (151)
T 1ix5_A 2 VDKGVKIKVDYIGKLESGDVFDTSIEEVAKEAGIYAPDREYEPLEFVVGEGQLIQGFEEAVLDMEVGDEKTVKIPAEKAY 81 (151)
T ss_dssp CCTTCEEEECCEECCTTSCCCEESCHHHHHHHTCCCSSCCCCCEEEETTTTCSCHHHHHHHHTCCTTCCCEEEECTTTSS
T ss_pred CCCCCEEEEEEEEEECCCCEEEecchhhcccccccccccCCCCEEEEECCCChhHHHHHHHcCCCCCCEEEEEECcHHHC
Confidence 67999999999999889999999963 23699999999999999999999999999999999999999
Q ss_pred CC
Q 033143 91 PK 92 (126)
Q Consensus 91 g~ 92 (126)
|+
T Consensus 82 G~ 83 (151)
T 1ix5_A 82 GN 83 (151)
T ss_dssp CS
T ss_pred CC
Confidence 95
No 39
>3cgm_A SLYD, peptidyl-prolyl CIS-trans isomerase; chaperone function, two domain P rotamase; 2.41A {Thermus thermophilus} PDB: 3cgn_A 3luo_A*
Probab=99.70 E-value=2.9e-17 Score=108.06 Aligned_cols=63 Identities=17% Similarity=0.283 Sum_probs=60.2
Q ss_pred CCCCCEEEEEEEEEcCCCCEEecccCCCccEEEEeCCCCcchhHHHHhcCCCcCcEEEEEEcCCCCCCC
Q 033143 24 PPVGFQVAANYVAMIPSGQIFDSSLEKGRPYIFRVGSGQVVKGLDEGILTMKTGGKRRLYIPGPLAFPK 92 (126)
Q Consensus 24 ~~~gd~V~v~y~~~~~~g~~~~st~~~~~~~~~~~g~~~~~~gl~~~l~~m~~G~~~~v~ip~~~ayg~ 92 (126)
++.||.|+++|+++ .||++|++++ +.|.+|.+++++||+++|.+|++|++++|.+||+.|||+
T Consensus 3 i~~gd~V~v~Y~g~-~dG~~fdss~-----~~f~~G~g~vipG~e~aL~Gm~~Ge~~~v~ipp~~aYG~ 65 (158)
T 3cgm_A 3 VGQDKVVTIRYTLQ-VEGEVLDQGE-----LSYLHGHRNLIPGLEEALEGREEGEAFQAHVPAEKAYGP 65 (158)
T ss_dssp CCTTEEEEEEEEEE-ETTEEEEEEE-----EEEETTSSSSCHHHHHHHTTCBTTCEEEEEECGGGTTCC
T ss_pred CCCCCEEEEEEEEE-ECCEEEEeeE-----EEEEECCCCcChHHHHHHcCCCCCCEEEEEECcHHHcCC
Confidence 67899999999999 7999999985 899999999999999999999999999999999999995
No 40
>1w26_A Trigger factor, TF; chaperone, protein folding, ribosome associated protein, nascent chain, cell division, isomerase; 2.7A {Escherichia coli} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 2vrh_A 1w2b_5
Probab=99.62 E-value=1.4e-15 Score=114.09 Aligned_cols=90 Identities=16% Similarity=0.358 Sum_probs=80.4
Q ss_pred CCCCCCCCEEEEEEEEEcCCCCEEecccCCCccEEEEeCCCCcchhHHHHhcCCCcCcEEEEEEcCCCCCCCCCCCCCCC
Q 033143 21 GPSPPVGFQVAANYVAMIPSGQIFDSSLEKGRPYIFRVGSGQVVKGLDEGILTMKTGGKRRLYIPGPLAFPKGLVSAPGR 100 (126)
Q Consensus 21 G~~~~~gd~V~v~y~~~~~~g~~~~st~~~~~~~~~~~g~~~~~~gl~~~l~~m~~G~~~~v~ip~~~ayg~~~~~~~~~ 100 (126)
+..++.||.|++||+++. ||+.|++++ +.|+.|.+|.++++|||+++|.||++|+++.|.+|+..+||. .
T Consensus 155 ~~~~~~gD~V~i~y~g~~-dG~~fd~~~--~~~~~~~lG~g~~ipgfee~L~G~k~Ge~~~v~v~~~~~yg~----~--- 224 (432)
T 1w26_A 155 DGAVEAEDRVTIDFTGSV-DGEEFEGGK--ASDFVLAMGQGRMIPGFEDGIKGHKAGEEFTIDVTFPEEYHA----E--- 224 (432)
T ss_dssp SSCCCTTCEEEECEEEES-SSCBCSSCC--CSSEEEETTSCCSCTTHHHHSSSCCSSCEEEEEEECCTTCSC----T---
T ss_pred CCCCCCCCEEEEEEEEee-CCeEccCCC--ccceEEEeCCCCcchHHHHHhCCCCCCCEEEEEECCchhhCC----C---
Confidence 446899999999999996 999999986 479999999999999999999999999999999999999984 1
Q ss_pred CCCCCCCceEEEEEEEeecCCC
Q 033143 101 PRVAPNSPVIFDVSLEYIPGLE 122 (126)
Q Consensus 101 ~~ip~~~~l~~~i~l~~~~~~~ 122 (126)
-.++.+++|+|+|.+++...
T Consensus 225 --~lag~~~~F~V~v~~v~~~~ 244 (432)
T 1w26_A 225 --NLKGKAAKFAINLKKVEERE 244 (432)
T ss_dssp --TTSSCEEEEEEECCEECCEE
T ss_pred --CCCCceEEEEEEEEEEeccC
Confidence 14778999999999997653
No 41
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.54 E-value=1.1e-13 Score=104.04 Aligned_cols=107 Identities=22% Similarity=0.433 Sum_probs=91.4
Q ss_pred cCCCcEEEEEEcCCCC-CCCCCCEEEEEEEEEcCCCCEEecccCCCccEEEEeCCC---CcchhHHHHhcCCCcCcEEEE
Q 033143 7 TESGLQYKDIKVGQGP-SPPVGFQVAANYVAMIPSGQIFDSSLEKGRPYIFRVGSG---QVVKGLDEGILTMKTGGKRRL 82 (126)
Q Consensus 7 ~~~g~~~~i~~~G~G~-~~~~gd~V~v~y~~~~~~g~~~~st~~~~~~~~~~~g~~---~~~~gl~~~l~~m~~G~~~~v 82 (126)
.+.++.++++++|.|. .|..||.|++||++++ +|++|++. ++.|.+|.+ .++++|+.|+..|+.|+++.+
T Consensus 144 ~dg~~~k~i~~~g~~~~~p~~g~~V~v~y~g~~-~g~~f~~~-----~~~f~~g~g~~~~v~~~~e~al~~~~~ge~~~l 217 (457)
T 1kt0_A 144 EDGGIIRRTKRKGEGYSNPNEGATVEIHLEGRC-GGRMFDCR-----DVAFTVGEGEDHDIPIGIDKALEKMQREEQCIL 217 (457)
T ss_dssp SSSSEEEEEEECCBCSCCCCTTCEEEEEEEEEE-TTEEEEEE-----EEEEETTCGGGGTCCHHHHHHHTTCCBTCEEEE
T ss_pred CCcceEEEEEecCCCCCCCCCCCEEEEEEEEEe-CCeEEecC-----ceEEEeCCCccccCChHHHHHHHhCCCCCEEEE
Confidence 4668899999999885 4999999999999999 89999974 689999966 489999999999999999999
Q ss_pred EEcCCCCCCCCCCCCCCCCCCCCCCceEEEEEEEeecCCC
Q 033143 83 YIPGPLAFPKGLVSAPGRPRVAPNSPVIFDVSLEYIPGLE 122 (126)
Q Consensus 83 ~ip~~~ayg~~~~~~~~~~~ip~~~~l~~~i~l~~~~~~~ 122 (126)
.++|.++|+..+.. ...||+++.+.|.+.+.++....
T Consensus 218 ~i~P~~ay~~~g~~---~~~ip~~~~l~y~~~l~~~~~A~ 254 (457)
T 1kt0_A 218 YLGPRYGFGEAGKP---KFGIEPNAELIYEVTLKSFEKAK 254 (457)
T ss_dssp EECGGGTTCSSCBG---GGTBCTTCCEEEEEEEEEEECCC
T ss_pred EECcccccCCCCCc---ccCCCCCCEEEEEhhhhhcccCc
Confidence 99999999852111 22589999999999999987654
No 42
>1t11_A Trigger factor, TF; helix-turn-helix, four-helix-bundle, ppiase, chaperone; 2.50A {Vibrio cholerae} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 1l1p_A
Probab=99.49 E-value=1.5e-14 Score=107.27 Aligned_cols=88 Identities=16% Similarity=0.356 Sum_probs=77.1
Q ss_pred CCCCCCCEEEEEEEEEcCCCCEEecccCCCccEEEEeCCCCcchhHHHHhcCCCcCcEEEEEEcCCCCCCCCCCCCCCCC
Q 033143 22 PSPPVGFQVAANYVAMIPSGQIFDSSLEKGRPYIFRVGSGQVVKGLDEGILTMKTGGKRRLYIPGPLAFPKGLVSAPGRP 101 (126)
Q Consensus 22 ~~~~~gd~V~v~y~~~~~~g~~~~st~~~~~~~~~~~g~~~~~~gl~~~l~~m~~G~~~~v~ip~~~ayg~~~~~~~~~~ 101 (126)
..++.||.|++||+++. ||+.|+++. +.++.|.+|.++++|||+++|.||++|+++.|.++....|+. .
T Consensus 159 ~~~~~gD~V~i~y~g~~-dG~~fd~~~--~~~~~~~lG~g~~ipgfee~L~Gmk~Ge~~~v~v~fp~dy~~----~---- 227 (392)
T 1t11_A 159 EAAENGKRVSIDFVGSI-DGVEFEGGK--AENFPLEMGAGRMIPGFEDGIVGKTKGMEFVIDVTFPEDYHA----E---- 227 (392)
T ss_dssp CCCCTTCEEEEEEEEES-SSSCCTTCE--EEEEEEETTSCCBSTTSGGGTTTCCSSCCCCEEEECCTTCSC----T----
T ss_pred CCCCCCCEEEEEEEEEE-CCEEccCCC--ccceEEEecCCCcchhHHHHhCCCCCCCEEEEEEeCcccccc----C----
Confidence 35899999999999996 999999883 479999999999999999999999999999999986677873 1
Q ss_pred CCCCCCceEEEEEEEeecCC
Q 033143 102 RVAPNSPVIFDVSLEYIPGL 121 (126)
Q Consensus 102 ~ip~~~~l~~~i~l~~~~~~ 121 (126)
-.+|.++.|+|+|.+++..
T Consensus 228 -~laGk~~~F~V~v~~i~~~ 246 (392)
T 1t11_A 228 -NLKGKAAKFAIKVNKVEAR 246 (392)
T ss_dssp -TTSSCEEEECCCEEEEEEE
T ss_pred -CCCCCeEEEEEEEEEEEcC
Confidence 2478999999999998754
No 43
>3gty_X Trigger factor, TF; chaperone-client complex, cell cycle, cell division, chapero isomerase, rotamase, ribonucleoprotein, binding; 3.40A {Thermotoga maritima} PDB: 3gu0_A
Probab=98.52 E-value=2e-07 Score=69.94 Aligned_cols=77 Identities=10% Similarity=0.032 Sum_probs=63.1
Q ss_pred CCCCCCEEEEEEEEEcCCCCEEecccCCCccEEEEeCCCCcchhHHHHhcCCCcCcEEEEEEcCCCCCCCCCCCCCCCCC
Q 033143 23 SPPVGFQVAANYVAMIPSGQIFDSSLEKGRPYIFRVGSGQVVKGLDEGILTMKTGGKRRLYIPGPLAFPKGLVSAPGRPR 102 (126)
Q Consensus 23 ~~~~gd~V~v~y~~~~~~g~~~~st~~~~~~~~~~~g~~~~~~gl~~~l~~m~~G~~~~v~ip~~~ayg~~~~~~~~~~~ 102 (126)
.++.||.|+++|+++. ||..|+++. +.++.+.+|.+. + |+++|.||++|+...|.+..
T Consensus 154 ~a~~gD~V~id~~~~~-dG~~~~~~~--~~~~~l~~g~~~--~-fe~~liG~k~Ge~~~~~vtF---------------- 211 (433)
T 3gty_X 154 PAEAGDLVRVNMEVYN-EEGKKLTSR--EYEYVISEDEDR--P-FVKDLVGKKKGDVVEIEREY---------------- 211 (433)
T ss_dssp CCCTTSEEEEEEEEEC-TTSCEEEEE--EEEEECCSSCCC--T-THHHHTTCCTTCEEEEEEEE----------------
T ss_pred ccCCCCEEEEEEEEEE-CCEECcCCC--CCCeEEEecCCc--h-HHHHhCCCCCCceEEEEEee----------------
Confidence 4789999999999985 899999863 357778888766 4 99999999999999998732
Q ss_pred CCCCCceEEEEEEEeecCCCC
Q 033143 103 VAPNSPVIFDVSLEYIPGLEA 123 (126)
Q Consensus 103 ip~~~~l~~~i~l~~~~~~~~ 123 (126)
+|.+..|.|+|.+|+.+..
T Consensus 212 --aGk~a~F~VtV~~Ik~~~l 230 (433)
T 3gty_X 212 --EGKKYTYKLEVEEVYKRTL 230 (433)
T ss_dssp --TTEEEEEEEEEEEEEEECC
T ss_pred --CCCeEEEEEEEEEEEEecC
Confidence 3457799999999876544
No 44
>2p4v_A Transcription elongation factor GREB; transcript cleavage, GRE-factors, RNA polymerase; 2.60A {Escherichia coli}
Probab=76.26 E-value=5.4 Score=25.50 Aligned_cols=26 Identities=12% Similarity=0.224 Sum_probs=21.9
Q ss_pred CcchhHHHHhcCCCcCcEEEEEEcCC
Q 033143 62 QVVKGLDEGILTMKTGGKRRLYIPGP 87 (126)
Q Consensus 62 ~~~~gl~~~l~~m~~G~~~~v~ip~~ 87 (126)
+....+..||.|.++||.+.+..|..
T Consensus 119 S~~SPlg~ALlGk~vGD~v~v~~P~G 144 (158)
T 2p4v_A 119 SIDSPMARALLKKEVGDLAVVNTPAG 144 (158)
T ss_dssp CTTSHHHHHSTTCCTTCEEEEECSSC
T ss_pred cCCCHHHHHhcCCCCCCEEEEEcCCC
Confidence 45567999999999999999988753
No 45
>2f23_A Anti-cleavage anti-GREA transcription factor GFH1; anti-GREA GFH1 thermus thermophilus; 1.60A {Thermus thermophilus} SCOP: a.2.1.1 d.26.1.2 PDB: 2eul_A 3aoh_X* 3aoi_X* 2etn_A
Probab=74.25 E-value=4.7 Score=25.66 Aligned_cols=25 Identities=16% Similarity=0.208 Sum_probs=21.2
Q ss_pred cchhHHHHhcCCCcCcEEEEEEcCC
Q 033143 63 VVKGLDEGILTMKTGGKRRLYIPGP 87 (126)
Q Consensus 63 ~~~gl~~~l~~m~~G~~~~v~ip~~ 87 (126)
....+..||.|.++||.+.+..|..
T Consensus 121 ~~SPlG~ALlGk~~GD~v~~~~p~G 145 (156)
T 2f23_A 121 DASPMGKALLGHRVGDVLSLDTPKG 145 (156)
T ss_dssp TTSHHHHHHTTCCTTCEEEEEETTE
T ss_pred CCCHHHHHHcCCCCCCEEEEEcCCC
Confidence 3456999999999999999988763
No 46
>3cgm_A SLYD, peptidyl-prolyl CIS-trans isomerase; chaperone function, two domain P rotamase; 2.41A {Thermus thermophilus} PDB: 3cgn_A 3luo_A*
Probab=64.27 E-value=2.5 Score=27.08 Aligned_cols=20 Identities=10% Similarity=0.112 Sum_probs=17.2
Q ss_pred CCCCceEEEEEEEeecCCCC
Q 033143 104 APNSPVIFDVSLEYIPGLEA 123 (126)
Q Consensus 104 p~~~~l~~~i~l~~~~~~~~ 123 (126)
.++.+|.|+|+|+++++..+
T Consensus 121 LAGk~L~F~vev~~v~~at~ 140 (158)
T 3cgm_A 121 LAGKDLDFQVEVVKVREATP 140 (158)
T ss_dssp TTTCCEEEEEEEEEEEECCH
T ss_pred ccCCEEEEEEEEEEeecCCH
Confidence 48899999999999987653
No 47
>1grj_A GREA protein; transcript elongation factor, transcript cleavage factor, transcription regulation; 2.20A {Escherichia coli} SCOP: a.2.1.1 d.26.1.2
Probab=60.75 E-value=5.7 Score=25.36 Aligned_cols=25 Identities=16% Similarity=0.276 Sum_probs=17.7
Q ss_pred cchhHHHHhcCCCcCcEEEEEEcCC
Q 033143 63 VVKGLDEGILTMKTGGKRRLYIPGP 87 (126)
Q Consensus 63 ~~~gl~~~l~~m~~G~~~~v~ip~~ 87 (126)
....+..||.|.++||.+.+..|..
T Consensus 122 ~~SPlG~ALlGk~~GD~v~v~~p~G 146 (158)
T 1grj_A 122 VNSPIARGLIGKEEDDVVVIKTPGG 146 (158)
T ss_dssp SSSHHHHHHTTCBTTCEECC-----
T ss_pred CCCHHHHHHcCCCCCCEEEEEcCCC
Confidence 4557999999999999999887764
No 48
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=59.87 E-value=35 Score=28.19 Aligned_cols=61 Identities=16% Similarity=0.239 Sum_probs=44.9
Q ss_pred CCCCCEEEEEEEEEcC-CCCEEe----------------cccC-----------CCccEEEEeCCCCcchhHHHHhcCCC
Q 033143 24 PPVGFQVAANYVAMIP-SGQIFD----------------SSLE-----------KGRPYIFRVGSGQVVKGLDEGILTMK 75 (126)
Q Consensus 24 ~~~gd~V~v~y~~~~~-~g~~~~----------------st~~-----------~~~~~~~~~g~~~~~~gl~~~l~~m~ 75 (126)
+..|+.+.|.|+..+. +|.--. +.|. ....+.|.+|.+.+.+-++-.+..|.
T Consensus 561 i~~gs~~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ies~~e~~fe~g~g~~~~~le~vV~qms 640 (950)
T 3htx_A 561 ITNGSVVSICYSLSLAVDPEYSSDGESPREDNESNEEMESEYSANCESSVEPIESNEEIEFEVGTGSMNPHIESEVTQMT 640 (950)
T ss_dssp CCTTEEEEEEEEEEEEECC----------------------------CCCEEEEEEEEEEEEETTTCBCHHHHHHHTTCC
T ss_pred cCCCcEEEEEEEEEEEecCcccccccccccccccccccccccccchhhhhhcccccHHHHHHHhcCCccchhhheeeecc
Confidence 6899999999999975 321110 1110 11468899999999999999999999
Q ss_pred cCcEEEEEE
Q 033143 76 TGGKRRLYI 84 (126)
Q Consensus 76 ~G~~~~v~i 84 (126)
.|+..-|..
T Consensus 641 ~gqT~~F~~ 649 (950)
T 3htx_A 641 VGEYASFKM 649 (950)
T ss_dssp TTCEEEEEE
T ss_pred ccceeEEec
Confidence 999988773
No 49
>3bmb_A Regulator of nucleoside diphosphate kinase; RNA polymerase, elongation factor, anti-GRE factor, RNA binding protein; 1.91A {Escherichia coli}
Probab=52.23 E-value=14 Score=22.83 Aligned_cols=25 Identities=20% Similarity=0.449 Sum_probs=21.3
Q ss_pred cchhHHHHhcCCCcCcEEEEEEcCC
Q 033143 63 VVKGLDEGILTMKTGGKRRLYIPGP 87 (126)
Q Consensus 63 ~~~gl~~~l~~m~~G~~~~v~ip~~ 87 (126)
....+..||.|.++||.+.+..|..
T Consensus 90 ~~SPlG~ALlGk~~GD~v~v~~p~G 114 (136)
T 3bmb_A 90 VMAPVGAALLGLRVGDSIHWELPGG 114 (136)
T ss_dssp TTSHHHHHHTTCBTTCEEEEEETTT
T ss_pred CCCHHHHHHcCCCCCCEEEEEcCCC
Confidence 4457999999999999999988763
No 50
>2lkt_A Retinoic acid receptor responder protein 3; TIG3, human tumor suppressor II family, NLPC/P60, hydrolase; NMR {Homo sapiens}
Probab=47.19 E-value=20 Score=21.51 Aligned_cols=25 Identities=16% Similarity=0.297 Sum_probs=19.5
Q ss_pred CCCCCCCEEEE------EEEEEcCCCCEEec
Q 033143 22 PSPPVGFQVAA------NYVAMIPSGQIFDS 46 (126)
Q Consensus 22 ~~~~~gd~V~v------~y~~~~~~g~~~~s 46 (126)
++|++||.|.+ ||-++..||.++.-
T Consensus 6 ~ep~pGDlI~~~r~~Y~H~gIYvGdg~ViH~ 36 (125)
T 2lkt_A 6 QEPKPGDLIEIFRLGYEHWALYIGDGYVIHL 36 (125)
T ss_dssp CCCCTTCEEEEECSSSCEEEEEEETTEEEEE
T ss_pred CCCCCCCEEEEeCCCccEEEEEeCCCeEEEE
Confidence 45899999987 67777778888764
No 51
>2pn0_A Prokaryotic transcription elongation factor GREA/GREB; structural genomics, APC6349, PSI-2, protein structure initiative; HET: MSE; 1.70A {Nitrosomonas europaea}
Probab=45.07 E-value=15 Score=22.89 Aligned_cols=25 Identities=16% Similarity=0.351 Sum_probs=20.9
Q ss_pred cchhHHHHhcCCCcCcEEEEEEcCC
Q 033143 63 VVKGLDEGILTMKTGGKRRLYIPGP 87 (126)
Q Consensus 63 ~~~gl~~~l~~m~~G~~~~v~ip~~ 87 (126)
+...+..||.|.++||.+.+..|..
T Consensus 93 ~~SPlG~ALlGk~vGD~v~v~~P~G 117 (141)
T 2pn0_A 93 ILAPVGSALLGLAQGDEIEWPKPGG 117 (141)
T ss_dssp TTSTTHHHHTTCBTTCEEEEECTTS
T ss_pred CCCHHHHHHcCCCCCCEEEEEcCCC
Confidence 4456899999999999999977653
No 52
>3tb5_A Methionine aminopeptidase; hydrolase, metalloprotease, enter feacalis; HET: CIT; 2.30A {Enterococcus faecalis}
Probab=42.44 E-value=76 Score=21.36 Aligned_cols=52 Identities=23% Similarity=0.289 Sum_probs=36.0
Q ss_pred CCCCCCCEEEEEEEEEcCCCCEEecccCCCccEEEEeCCCC---------cchhHHHHhcCCCcCcEE
Q 033143 22 PSPPVGFQVAANYVAMIPSGQIFDSSLEKGRPYIFRVGSGQ---------VVKGLDEGILTMKTGGKR 80 (126)
Q Consensus 22 ~~~~~gd~V~v~y~~~~~~g~~~~st~~~~~~~~~~~g~~~---------~~~gl~~~l~~m~~G~~~ 80 (126)
..+++||.|.+++-+.. +|-.-|.| .+|.+|... +..+++.++..+++|-++
T Consensus 83 ~~l~~Gdlv~iD~g~~~-~GY~sD~t------RT~~vG~~~~~~~~l~~~v~~a~~~~i~~~kpG~~~ 143 (264)
T 3tb5_A 83 KVLKDGDLIKVDMCVDL-KGAISDSC------WSYVVGESTPEIDRLMEVTKKALYLGIEQAQVGNRI 143 (264)
T ss_dssp CBCCTTCEEEEEEEEEE-TTEEEEEE------EEEECSSCCHHHHHHHHHHHHHHHHHHHTCCTTCBH
T ss_pred ccccCCCEEEEecccee-cceeeecc------cccccCCccHHHHHHHHHHHHHHHHHHhhhCCCCCH
Confidence 34899999999998876 67555554 356666532 345667777788887653
No 53
>1o65_A Hypothetical protein YIIM; structural genomics, unknown function; 2.33A {Escherichia coli} SCOP: b.58.1.2 PDB: 1o67_A
Probab=37.45 E-value=13 Score=25.62 Aligned_cols=24 Identities=17% Similarity=0.183 Sum_probs=21.0
Q ss_pred cCCCcEEEEEEcCCCCCCCCCCEEEEE
Q 033143 7 TESGLQYKDIKVGQGPSPPVGFQVAAN 33 (126)
Q Consensus 7 ~~~g~~~~i~~~G~G~~~~~gd~V~v~ 33 (126)
...|++++|++.|. +..||.|.+.
T Consensus 152 ~r~G~y~rVl~~G~---V~~GD~v~l~ 175 (246)
T 1o65_A 152 GKVGWLYSVIAPGK---VSADAPLELV 175 (246)
T ss_dssp TCCCEEEEEEECEE---EETTSCEEEE
T ss_pred CCcEEEEEEeeCcE---EcCCCEEEEe
Confidence 56899999999987 8899998876
No 54
>3fm3_A Methionine aminopeptidase 2; metap2, structural genomics, PSI-2, protein structure initiative; 2.18A {Encephalitozoon cuniculi} PDB: 3fmq_A* 3fmr_A*
Probab=35.80 E-value=82 Score=22.62 Aligned_cols=50 Identities=14% Similarity=0.233 Sum_probs=32.7
Q ss_pred CCCCCCEEEEEEEEEcCCCCEEecccCCCccEEEEeCCCC--c----chhHHHHhcCCCcCcE
Q 033143 23 SPPVGFQVAANYVAMIPSGQIFDSSLEKGRPYIFRVGSGQ--V----VKGLDEGILTMKTGGK 79 (126)
Q Consensus 23 ~~~~gd~V~v~y~~~~~~g~~~~st~~~~~~~~~~~g~~~--~----~~gl~~~l~~m~~G~~ 79 (126)
.+++||.|.|++.+.. ||-.-|.+ .+|.+|... + ..+++.++..+++|-+
T Consensus 120 ~L~~GDiV~ID~G~~~-dGY~sD~a------rT~~vg~~~~~l~~~~~~al~aai~~~~pG~~ 175 (358)
T 3fm3_A 120 VLKEDDVLKIDFGTHS-DGRIMDSA------FTVAFKENLEPLLVAAREGTETGIKSLGVDVR 175 (358)
T ss_dssp BCCTTCEEEEEEEEEE-TTEEEEEE------EEEECCGGGHHHHHHHHHHHHHHHHHCCTTCB
T ss_pred EecCCCEEEEEeeEEE-CCEEEEEE------EeccccccchhHHHHHHHHHHHHHHhhhcCCc
Confidence 3889999999999988 78666654 456676431 1 2345555555555543
No 55
>1xgs_A Methionine aminopeptidase; hyperthermophIle; 1.75A {Pyrococcus furiosus} SCOP: a.4.5.25 d.127.1.1 PDB: 1xgm_A 1xgn_A 1xgo_A 1wkm_A 2dfi_A
Probab=35.74 E-value=91 Score=21.62 Aligned_cols=51 Identities=22% Similarity=0.249 Sum_probs=34.1
Q ss_pred CCCCCCCEEEEEEEEEcCCCCEEecccCCCccEEEEeCCCC------cchhHHHHhcCCCcCcE
Q 033143 22 PSPPVGFQVAANYVAMIPSGQIFDSSLEKGRPYIFRVGSGQ------VVKGLDEGILTMKTGGK 79 (126)
Q Consensus 22 ~~~~~gd~V~v~y~~~~~~g~~~~st~~~~~~~~~~~g~~~------~~~gl~~~l~~m~~G~~ 79 (126)
..+++||.|.+++-+.. +|-.-|.+ .+|.+|... +..+++.++..+++|-+
T Consensus 71 ~~L~~GDiv~iD~G~~~-~GY~sD~t------RT~~vG~~~~~l~~~~~~a~~~~i~~~kpG~~ 127 (295)
T 1xgs_A 71 TVLKEGDYLKIDVGVHI-DGFIADTA------VTVRVGMEEDELMEAAKEALNAAISVARAGVE 127 (295)
T ss_dssp CBCCTTCEEEEEEEEEE-TTEEEEEE------EEEETTSCCCHHHHHHHHHHHHHHHHCSTTCB
T ss_pred ccccCCCEEEEEEeEEE-CCEEEEEE------EEEEeCHHHHHHHHHHHHHHHHHHHHhCCCCc
Confidence 34899999999999987 67666655 456666421 23555666666666654
No 56
>1oru_A YUAD protein; structural genomics, cytosolic hypothetical protein, PSI, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.80A {Bacillus subtilis} SCOP: b.58.1.2
Probab=34.60 E-value=21 Score=23.42 Aligned_cols=24 Identities=13% Similarity=0.090 Sum_probs=20.8
Q ss_pred cCCCcEEEEEEcCCCCCCCCCCEEEEE
Q 033143 7 TESGLQYKDIKVGQGPSPPVGFQVAAN 33 (126)
Q Consensus 7 ~~~g~~~~i~~~G~G~~~~~gd~V~v~ 33 (126)
...|+++++++.|. +..||.|.+.
T Consensus 159 ~r~G~~~rVl~~G~---I~~GD~v~l~ 182 (195)
T 1oru_A 159 GIRGIVCIVERPGA---VYTGDEIEVH 182 (195)
T ss_dssp TSSCEEEEEEECEE---EETTCEEEEE
T ss_pred CCccEEEEEecCce---EcCCCEEEEE
Confidence 56899999999987 8899998875
No 57
>2l8d_A Lamin-B receptor; DNA binding protein; NMR {Gallus gallus}
Probab=31.18 E-value=52 Score=17.76 Aligned_cols=17 Identities=18% Similarity=0.358 Sum_probs=13.6
Q ss_pred CCCceEEEEEEEeecCC
Q 033143 105 PNSPVIFDVSLEYIPGL 121 (126)
Q Consensus 105 ~~~~l~~~i~l~~~~~~ 121 (126)
|++.+.|.+++.++...
T Consensus 21 ~Gd~~yYparI~Si~s~ 37 (66)
T 2l8d_A 21 PGSVLYYEVQVTSYDDA 37 (66)
T ss_dssp TTSSCEEEEEEEEEETT
T ss_pred CCCccceEEEEEEeccC
Confidence 67778899999998743
No 58
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=30.84 E-value=91 Score=18.85 Aligned_cols=33 Identities=15% Similarity=0.118 Sum_probs=17.9
Q ss_pred CCCEEEEEEEEEcCCCCEEecccCCCccEEEEe
Q 033143 26 VGFQVAANYVAMIPSGQIFDSSLEKGRPYIFRV 58 (126)
Q Consensus 26 ~gd~V~v~y~~~~~~g~~~~st~~~~~~~~~~~ 58 (126)
.|+.+.+.++..+.....+.=++..+.-+.|.+
T Consensus 16 ~g~~v~~~ltv~N~s~~~v~l~f~Sgq~~Df~v 48 (120)
T 3isy_A 16 EPEQIKFNMSLKNQSERAIEFQFSTGQKFELVV 48 (120)
T ss_dssp CSSCEEEEEEEEECSSSCEEEEESSSCCEEEEE
T ss_pred CCCeEEEEEEEEcCCCCcEEEEeCCCCEEEEEE
Confidence 455677777777654444443343444445544
No 59
>1dj7_B Ferredoxin thioredoxin reductase: variable chain; 4Fe-4S cluster binding fold with CXCX16CXCX8CXC binding MOTI electron transport; 1.60A {Synechocystis SP} SCOP: b.34.4.3 PDB: 2pu9_B 2pvo_B 2puo_B 2puk_B 2pvd_B 2pvg_B
Probab=30.16 E-value=19 Score=20.09 Aligned_cols=12 Identities=25% Similarity=0.437 Sum_probs=9.6
Q ss_pred CCcCcEEEEEEc
Q 033143 74 MKTGGKRRLYIP 85 (126)
Q Consensus 74 m~~G~~~~v~ip 85 (126)
|++|+++++..|
T Consensus 1 mk~GdrVrV~~s 12 (75)
T 1dj7_B 1 MNVGDRVRVTSS 12 (75)
T ss_dssp CCTTCEEEECSC
T ss_pred CCCCCEEEEccc
Confidence 889999997643
No 60
>3bid_A UPF0339 protein NMB1088; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.70A {Neisseria meningitidis MC58} SCOP: d.348.1.1
Probab=28.62 E-value=72 Score=16.98 Aligned_cols=27 Identities=11% Similarity=0.151 Sum_probs=20.2
Q ss_pred EEEEEEcCCCCCCCCCCEEEEEEEEEcCCCCEEecc
Q 033143 12 QYKDIKVGQGPSPPVGFQVAANYVAMIPSGQIFDSS 47 (126)
Q Consensus 12 ~~~i~~~G~G~~~~~gd~V~v~y~~~~~~g~~~~st 47 (126)
+|.+.+..+|. +.|.++..||+++-++
T Consensus 2 ~Fei~~~~~G~---------frfrLka~NGevI~sS 28 (64)
T 3bid_A 2 YFEIYKDAKGE---------YRWRLKAANHEIIAQG 28 (64)
T ss_dssp EEEEEECTTSC---------EEEEEECTTSCEEEEC
T ss_pred EEEEEECCCCC---------EEEEEEeCCCCEEEEC
Confidence 56666666664 7888888899988865
No 61
>2p5d_A UPF0310 protein mjecl36; NPPSFA, national project on protein structural and functional analyses; 1.70A {Methanocaldococcus jannaschii}
Probab=27.98 E-value=38 Score=21.18 Aligned_cols=18 Identities=28% Similarity=0.392 Sum_probs=15.3
Q ss_pred hHHHHhcCCCcCcEEEEE
Q 033143 66 GLDEGILTMKTGGKRRLY 83 (126)
Q Consensus 66 gl~~~l~~m~~G~~~~v~ 83 (126)
+-..-|..|++||++.|+
T Consensus 30 ~arn~lr~Mk~GD~~~fY 47 (147)
T 2p5d_A 30 RYKNTINKVKVGDKLIIY 47 (147)
T ss_dssp GGHHHHTTCCTTCEEEEE
T ss_pred HHHHHHHhCCCCCEEEEE
Confidence 445677899999999999
No 62
>4fuk_A Methionine aminopeptidase; structural genomics consortium, SGC, hydrolase; 1.75A {Trypanosoma brucei brucei}
Probab=27.93 E-value=1.6e+02 Score=20.75 Aligned_cols=52 Identities=15% Similarity=0.057 Sum_probs=35.6
Q ss_pred CCCCCCCEEEEEEEEEcCCCCEEecccCCCccEEEEeCCCC---------cchhHHHHhcCCCcCcEE
Q 033143 22 PSPPVGFQVAANYVAMIPSGQIFDSSLEKGRPYIFRVGSGQ---------VVKGLDEGILTMKTGGKR 80 (126)
Q Consensus 22 ~~~~~gd~V~v~y~~~~~~g~~~~st~~~~~~~~~~~g~~~---------~~~gl~~~l~~m~~G~~~ 80 (126)
..+++||.|.+++.+.. +|-.-|.+ .+|.+|... +..+++.++..+++|-++
T Consensus 142 ~~l~~GD~v~iD~g~~~-~GY~sD~t------RT~~vG~~~~~~~~l~~~v~ea~~~ai~~~kpG~~~ 202 (337)
T 4fuk_A 142 RELEEGDILNIDVSSYL-NGFHGDLN------ETVFIGRPDDDSVRLVHAAYECLCAGIGVVKPEALY 202 (337)
T ss_dssp CBCCTTCEEEEEEEEEE-TTEEEEEE------EEEESSSCCHHHHHHHHHHHHHHHHHHTTCSTTCBT
T ss_pred ccccCCCEEEEecceeE-CCEEEeee------eeEEeCCccHHHHHHHHHHHHHHHHHHhhccccccH
Confidence 34899999999999988 67655555 356666432 245566677777777553
No 63
>2nw5_A Methionine aminopeptidase 2; metap2, structural genomics, PSI-2, protein structure initiative; 2.18A {Encephalitozoon cuniculi} PDB: 3cmk_A* 3d0d_A* 3fm3_A 3fmq_A* 3fmr_A*
Probab=27.92 E-value=1.2e+02 Score=21.93 Aligned_cols=50 Identities=14% Similarity=0.222 Sum_probs=34.2
Q ss_pred CCCCCCEEEEEEEEEcCCCCEEecccCCCccEEEEeCCCC------cchhHHHHhcCCCcCcE
Q 033143 23 SPPVGFQVAANYVAMIPSGQIFDSSLEKGRPYIFRVGSGQ------VVKGLDEGILTMKTGGK 79 (126)
Q Consensus 23 ~~~~gd~V~v~y~~~~~~g~~~~st~~~~~~~~~~~g~~~------~~~gl~~~l~~m~~G~~ 79 (126)
.+++||.|.+++-+.. +|-..|.+ .+|.++... +..+++.++..+++|-+
T Consensus 122 ~L~~GDlV~ID~G~~~-~GY~sD~t------RT~~v~~~~~~l~~av~eA~~aai~~~kPGv~ 177 (360)
T 2nw5_A 122 VLKEDDVLKIDFGTHS-DGRIMDSA------FTVAFKENLEPLLVAAREGTETGIKSLGVDVR 177 (360)
T ss_dssp BCCTTCEEEEEEEEEE-TTEEEEEE------EEEECCGGGHHHHHHHHHHHHHHHHHCCTTCB
T ss_pred CcCCCCEEEEEEEEEE-CCEEEEEE------EEEEcCHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 4899999999998887 77666665 344554321 34566667777777754
No 64
>2lj4_A Peptidyl-prolyl CIS-trans isomerase/rotamase, PUT; tbpin1; NMR {Trypanosoma brucei}
Probab=26.85 E-value=37 Score=20.15 Aligned_cols=22 Identities=23% Similarity=0.510 Sum_probs=19.3
Q ss_pred CCCcchhHHHHhcCCCcCcEEE
Q 033143 60 SGQVVKGLDEGILTMKTGGKRR 81 (126)
Q Consensus 60 ~~~~~~gl~~~l~~m~~G~~~~ 81 (126)
.+++.+.|++++-.|++|+...
T Consensus 79 ~~~~~~~f~~a~~~l~~GeiS~ 100 (115)
T 2lj4_A 79 SGEMMKPFEDAVRALKIGDISP 100 (115)
T ss_dssp TTSSCHHHHHHHTTSCBTCBCC
T ss_pred CCCCCchHHHHHhcCCCCCCCC
Confidence 4678999999999999999765
No 65
>3mx6_A Methionine aminopeptidase; seattle structural genomics center for infectious disease, S aminopeptidase, protease, epidermic typhus; 1.70A {Rickettsia prowazekii} PDB: 3mr1_A
Probab=26.26 E-value=1.5e+02 Score=19.87 Aligned_cols=51 Identities=22% Similarity=0.296 Sum_probs=34.2
Q ss_pred CCCCCCCEEEEEEEEEcCCCCEEecccCCCccEEEEeCCCC---------cchhHHHHhcCCCcCcE
Q 033143 22 PSPPVGFQVAANYVAMIPSGQIFDSSLEKGRPYIFRVGSGQ---------VVKGLDEGILTMKTGGK 79 (126)
Q Consensus 22 ~~~~~gd~V~v~y~~~~~~g~~~~st~~~~~~~~~~~g~~~---------~~~gl~~~l~~m~~G~~ 79 (126)
..+++||.|.+++-+.. +|-.-|.+ .+|.+|... +..+++.++..+++|-+
T Consensus 87 ~~l~~Gd~v~iD~G~~~-~GY~sD~t------RT~~vG~~~~~~~~~~~~v~~a~~~~i~~~kpG~~ 146 (262)
T 3mx6_A 87 KPLKNGDIVNIDVTVIL-DGWYGDTS------RMYYVGDVAIKPKRLIQVTYDAMMKGIEVVRPGAK 146 (262)
T ss_dssp CBCCTTCEEEEEEEEEE-TTEEEEEE------EEEECSSCCHHHHHHHHHHHHHHHHHHHTCSTTCB
T ss_pred cccCCCCEEEEEeeEEE-CCEEEEEE------EEEEcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 34899999999998887 66555554 356666421 34556666777777754
No 66
>2b3h_A Methionine aminopeptidase 1; hydrolase, metalloprotease, pitab; HET: GOL; 1.10A {Homo sapiens} PDB: 2b3k_A 2b3l_A 2gz5_A* 2nq6_A* 2nq7_A* 2g6p_A*
Probab=26.00 E-value=1.8e+02 Score=20.59 Aligned_cols=52 Identities=21% Similarity=0.108 Sum_probs=35.4
Q ss_pred CCCCCCCEEEEEEEEEcCCCCEEecccCCCccEEEEeCCC---------CcchhHHHHhcCCCcCcEE
Q 033143 22 PSPPVGFQVAANYVAMIPSGQIFDSSLEKGRPYIFRVGSG---------QVVKGLDEGILTMKTGGKR 80 (126)
Q Consensus 22 ~~~~~gd~V~v~y~~~~~~g~~~~st~~~~~~~~~~~g~~---------~~~~gl~~~l~~m~~G~~~ 80 (126)
..+++||.|.+++.+.. +|-.-|.+ .+|.+|.. .+..+++.++..+++|-+.
T Consensus 154 ~~L~~GDiv~iD~G~~~-~GY~sD~t------RT~~vG~~~~~~~~l~~~v~~a~~~ai~~~kPG~~~ 214 (329)
T 2b3h_A 154 RPLQEGDIVNVDITLYR-NGYHGDLN------ETFFVGEVDDGARKLVQTTYECLMQAIDAVKPGVRY 214 (329)
T ss_dssp CBCCTTCEEEEEEEEEE-TTEEEEEE------EEEECSSCCHHHHHHHHHHHHHHHHHHHTCCTTCBT
T ss_pred cCCCCCCEEEEEeeEEE-CCEEEeeE------EEEEeCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcH
Confidence 44899999999999988 66555554 45667642 1345666677777777543
No 67
>2pv1_A Chaperone SURA; surviVal protein A, peptidyl-prolyl CIS-trans isomerase domain, peptide, complex; 1.30A {Escherichia coli} SCOP: d.26.1.1 PDB: 2pv2_A
Probab=24.88 E-value=64 Score=18.35 Aligned_cols=23 Identities=13% Similarity=0.036 Sum_probs=19.7
Q ss_pred CCCcchhHHHHhcCCCcCcEEEE
Q 033143 60 SGQVVKGLDEGILTMKTGGKRRL 82 (126)
Q Consensus 60 ~~~~~~gl~~~l~~m~~G~~~~v 82 (126)
.+++.+.|++++..|++|+....
T Consensus 65 ~~~l~~~f~~a~~~l~~G~is~p 87 (103)
T 2pv1_A 65 IQELPGIFAQALSTAKKGDIVGP 87 (103)
T ss_dssp GGGSCHHHHHHTTTCCTTCEEEE
T ss_pred hhhcCHHHHHHHHcCCCCCeecc
Confidence 46788999999999999998764
No 68
>1qxy_A Methionyl aminopeptidase; PITA bread fold, hydrolase; HET: M2C; 1.04A {Staphylococcus aureus} SCOP: d.127.1.1 PDB: 1qxw_A* 1qxz_A*
Probab=24.40 E-value=1.6e+02 Score=19.50 Aligned_cols=52 Identities=23% Similarity=0.269 Sum_probs=34.2
Q ss_pred CCCCCCCEEEEEEEEEcCCCCEEecccCCCccEEEEeCCC-C---------cchhHHHHhcCCCcCcEE
Q 033143 22 PSPPVGFQVAANYVAMIPSGQIFDSSLEKGRPYIFRVGSG-Q---------VVKGLDEGILTMKTGGKR 80 (126)
Q Consensus 22 ~~~~~gd~V~v~y~~~~~~g~~~~st~~~~~~~~~~~g~~-~---------~~~gl~~~l~~m~~G~~~ 80 (126)
..+++||.|.+++-+.. +|-.-|.+ .+|.+|.. . +..+++.++..+++|-+.
T Consensus 82 ~~l~~gd~v~iD~g~~~-~gy~sD~t------RT~~vG~~~~~~~~~~~~~~~~a~~~~i~~~kpG~~~ 143 (252)
T 1qxy_A 82 RVIREGDLVNIDVSALK-NGYYADTG------ISFVVGESDDPMKQKVCDVATMAFENAIAKVKPGTKL 143 (252)
T ss_dssp CBCCTTCEEEEEEEEEE-TTEEEEEE------EEEECSCCSCTHHHHHHHHHHHHHHHHHTTCCTTCBT
T ss_pred cCcCCCCEEEEEeeEEE-CCEEEEEE------EEEEcCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCCH
Confidence 44899999999999987 66555554 35666641 1 234556667777777643
No 69
>2hd9_A UPF0310 protein PH1033; pyrococcus horikoshii OT3, structural genomics, NPPSFA, NATI project on protein structural and functional analyses; HET: CIT; 1.35A {Pyrococcus horikoshii} SCOP: b.122.1.8 PDB: 1wmm_A* 2zbn_A
Probab=23.97 E-value=50 Score=20.54 Aligned_cols=20 Identities=20% Similarity=0.380 Sum_probs=16.7
Q ss_pred HHHhcCCCcCcEEEEEEcCC
Q 033143 68 DEGILTMKTGGKRRLYIPGP 87 (126)
Q Consensus 68 ~~~l~~m~~G~~~~v~ip~~ 87 (126)
...|..|++||++.|+.+..
T Consensus 29 rn~lr~mk~GD~~~fYhs~~ 48 (145)
T 2hd9_A 29 KNTLSRVKPGDKLVIYVRQE 48 (145)
T ss_dssp HHHHTTCCTTCEEEEEECCE
T ss_pred HHHHHhCCCCCEEEEEEccc
Confidence 45678999999999998764
No 70
>3gpk_A PPIC-type peptidyl-prolyl CIS-trans isomerase; rotamase,ppiase domain, 11189O3,PSI2., structural genomics; 1.55A {Novosphingobium aromaticivorans}
Probab=23.84 E-value=53 Score=19.39 Aligned_cols=25 Identities=16% Similarity=0.045 Sum_probs=20.7
Q ss_pred CCCCcchhHHHHhcCCCcCcEEEEE
Q 033143 59 GSGQVVKGLDEGILTMKTGGKRRLY 83 (126)
Q Consensus 59 g~~~~~~gl~~~l~~m~~G~~~~v~ 83 (126)
..+++.+.|++++..|++|+....+
T Consensus 65 ~~~~l~~~f~~a~~~l~~GeiS~pv 89 (112)
T 3gpk_A 65 RLAQLPTELATTAASMGPGQLAGPV 89 (112)
T ss_dssp CGGGSCHHHHHHHHHCCTTCEEEEE
T ss_pred cccccCHHHHHHHHhCCCCCccceE
Confidence 3467899999999999999987543
No 71
>3lvj_C Sulfurtransferase TUSA; protein-protein complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PLP; 2.44A {Escherichia coli} SCOP: d.68.3.3 PDB: 3lvk_B* 1dcj_A
Probab=23.77 E-value=72 Score=17.52 Aligned_cols=23 Identities=13% Similarity=0.264 Sum_probs=19.2
Q ss_pred HHHHhcCCCcCcEEEEEEcCCCC
Q 033143 67 LDEGILTMKTGGKRRLYIPGPLA 89 (126)
Q Consensus 67 l~~~l~~m~~G~~~~v~ip~~~a 89 (126)
..++|..|..|+...|++.-..+
T Consensus 27 ~kkal~~l~~G~~l~V~~dd~~a 49 (82)
T 3lvj_C 27 VRKTVRNMQPGETLLIIADDPAT 49 (82)
T ss_dssp HHHHHHTSCTTCEEEEEECCTTH
T ss_pred HHHHHHhCCCCCEEEEEECCccH
Confidence 67899999999999999875544
No 72
>2rqs_A Parvulin-like peptidyl-prolyl isomerase; CIS/trans isomerisation, cenarcheaum symbiosum, low temperat NIMA-kinase, PIN1, cell cycle; NMR {Cenarchaeum symbiosum}
Probab=23.61 E-value=58 Score=18.39 Aligned_cols=23 Identities=22% Similarity=0.560 Sum_probs=19.6
Q ss_pred CCCCcchhHHHHhcCCCcCcEEE
Q 033143 59 GSGQVVKGLDEGILTMKTGGKRR 81 (126)
Q Consensus 59 g~~~~~~gl~~~l~~m~~G~~~~ 81 (126)
..+++.+.|++++..|++|+...
T Consensus 60 ~~~~l~~~f~~a~~~l~~G~is~ 82 (97)
T 2rqs_A 60 GRGKMVKPFEDAAFRLQVGEVSE 82 (97)
T ss_dssp CTTSSCHHHHHHHTTCTTSCBCC
T ss_pred cCCCCCHHHHHHHHcCCCCCccc
Confidence 45678999999999999999754
No 73
>2vqe_L 30S ribosomal protein S12, 30S ribosomal protein S6; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: i.1.1.1 PDB: 1gix_O* 1hnw_L* 1hnx_L* 1hnz_L* 1hr0_L 1ibk_L* 1ibl_L* 1ibm_L 1j5e_L 1jgo_O* 1jgp_O* 1jgq_O* 1mj1_O* 1ml5_O* 1mvr_O 1n32_L* 1n33_L* 1n34_L 1n36_L 1xmo_L* ...
Probab=22.98 E-value=1.4e+02 Score=18.46 Aligned_cols=28 Identities=18% Similarity=0.113 Sum_probs=23.3
Q ss_pred EcCCCcEEEEEEcCCCCCCCCCCEEEEE
Q 033143 6 TTESGLQYKDIKVGQGPSPPVGFQVAAN 33 (126)
Q Consensus 6 ~~~~g~~~~i~~~G~G~~~~~gd~V~v~ 33 (126)
...+|....-..+|.|-.++++|.|.|.
T Consensus 59 rL~ngk~VtAyIPG~GhnlqEhs~VLVr 86 (135)
T 2vqe_L 59 RLTSGYEVTAYIPGEGHNLQEHSVVLIR 86 (135)
T ss_dssp EETTSCEEEEECCSSCCCCCTTCEEEEE
T ss_pred EcCCCCEEEEEcCCCCCccCcCCEEEEc
Confidence 3467888888889999779999999887
No 74
>1jns_A Peptidyl-prolyl CIS-trans isomerase C; alpha-beta sandwich, CIS peptide bond; NMR {Escherichia coli} SCOP: d.26.1.1 PDB: 1jnt_A
Probab=22.21 E-value=53 Score=18.32 Aligned_cols=23 Identities=17% Similarity=0.216 Sum_probs=19.5
Q ss_pred CCCcchhHHHHhcCCCcCcEEEE
Q 033143 60 SGQVVKGLDEGILTMKTGGKRRL 82 (126)
Q Consensus 60 ~~~~~~gl~~~l~~m~~G~~~~v 82 (126)
.+++.+.|++++..|++|+....
T Consensus 54 ~~~l~~~f~~a~~~l~~G~is~p 76 (92)
T 1jns_A 54 QGQMVPAFDKVVFSCPVLEPTGP 76 (92)
T ss_dssp TTSSCHHHHHHHHHSCTTCCEEE
T ss_pred CcccCHHHHHHHHhCCCCCcCCc
Confidence 36788999999999999998654
No 75
>3pka_A Methionine aminopeptidase; hydrolase-hydrolase inhibitor complex; HET: Y02; 1.25A {Mycobacterium tuberculosis} PDB: 3pkb_A* 3pkc_A* 3pkd_A* 3pke_A* 3iu7_A* 3iu8_A* 3iu9_A* 1y1n_A 1yj3_A 3ror_A
Probab=21.57 E-value=2e+02 Score=19.63 Aligned_cols=51 Identities=24% Similarity=0.169 Sum_probs=34.5
Q ss_pred CCCCCCCEEEEEEEEEcCCCCEEecccCCCccEEEEeCCCC---------cchhHHHHhcCCCcCcE
Q 033143 22 PSPPVGFQVAANYVAMIPSGQIFDSSLEKGRPYIFRVGSGQ---------VVKGLDEGILTMKTGGK 79 (126)
Q Consensus 22 ~~~~~gd~V~v~y~~~~~~g~~~~st~~~~~~~~~~~g~~~---------~~~gl~~~l~~m~~G~~ 79 (126)
..++.||.|.+++-+.. +|-.-|.+ .+|.+|... +..+++.++..+++|-+
T Consensus 120 ~~l~~Gd~v~iD~G~~~-~GY~sD~t------RT~~vG~~~~~~~~~~~~v~~a~~~~i~~~kpG~~ 179 (285)
T 3pka_A 120 TVITDGDIVNIDVTAYI-GGVHGDTN------ATFPAGDVADEHRLLVDRTREATMRAINTVKPGRA 179 (285)
T ss_dssp CBCCTTCEEEEEEEEEE-TTEEEEEE------EEEECSSCCHHHHHHHHHHHHHHHHHHHTCCTTSB
T ss_pred cccCCCCEEEEEEEEEE-CCEEEEEE------EEEEcCCCCHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 34899999999999886 66555554 356666421 34556667777777754
No 76
>3s6b_A Methionine aminopeptidase; malaria, proteolysis, "PITA bread" fold, structur genomics, structural genomics consortium, SGC, hydrolase; 1.95A {Plasmodium falciparum}
Probab=21.06 E-value=2e+02 Score=20.79 Aligned_cols=51 Identities=20% Similarity=0.094 Sum_probs=34.3
Q ss_pred CCCCCCCEEEEEEEEEcCCCCEEecccCCCccEEEEeC---CC---------CcchhHHHHhcCCCcCcE
Q 033143 22 PSPPVGFQVAANYVAMIPSGQIFDSSLEKGRPYIFRVG---SG---------QVVKGLDEGILTMKTGGK 79 (126)
Q Consensus 22 ~~~~~gd~V~v~y~~~~~~g~~~~st~~~~~~~~~~~g---~~---------~~~~gl~~~l~~m~~G~~ 79 (126)
..+++||.|.+++.+.. +|-.-|.+ .+|.+| .. .+..+++.++..+++|-+
T Consensus 182 r~L~~GDiV~iD~G~~~-~GY~sDit------RT~~vGg~~~~s~e~~~ly~~v~ea~~aai~~ikPG~~ 244 (368)
T 3s6b_A 182 RPLKSGDIINIDISVFY-KGVHSDLN------ETYFVGDINDVPKEGKELVETCYFSLMEAIKKCKPGMF 244 (368)
T ss_dssp CBCCTTCEEEEEEEEEE-TTEEEEEE------EEEECSCGGGSCHHHHHHHHHHHHHHHHHHHHCCTTCB
T ss_pred ccccCCCEEEEEEeEEE-CcEEEEEE------EEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHccCCCc
Confidence 34899999999999988 56555554 457777 21 124556666777777754
No 77
>1je3_A EC005, hypothetical 8.6 kDa protein in AMYA-FLIE intergenic region; mixed alpha-beta structure, structural genomics; NMR {Escherichia coli} SCOP: d.68.3.3
Probab=20.84 E-value=1.2e+02 Score=17.45 Aligned_cols=24 Identities=17% Similarity=0.152 Sum_probs=19.7
Q ss_pred hHHHHhcCCCcCcEEEEEEcCCCC
Q 033143 66 GLDEGILTMKTGGKRRLYIPGPLA 89 (126)
Q Consensus 66 gl~~~l~~m~~G~~~~v~ip~~~a 89 (126)
-..++|..|..|+...|++.-..+
T Consensus 43 ktkkaL~~l~~Ge~L~Vl~dd~~a 66 (97)
T 1je3_A 43 ATLEAMPQLKKGEILEVVSDCPQS 66 (97)
T ss_dssp HHHHHTTTCCSSCEEEEEEBCSSS
T ss_pred HHHHHHHcCCCCCEEEEEECCcch
Confidence 367899999999999999876543
No 78
>3r8s_P 50S ribosomal protein L19; protein biosynthesis, RNA, tRNA, transfer RNA, 23S ribosomal subunit, ribosome recycling factor, RRF, ribosome; 3.00A {Escherichia coli} PDB: 1p85_N 1p86_N 2awb_P 2gya_N 2gyc_N 2aw4_P 2i2v_P 2j28_P 2i2t_P* 2qao_P* 2qba_P* 2qbc_P* 2qbe_P 2qbg_P 2qbi_P* 2qbk_P* 2qov_P 2qox_P 2qoz_P* 2qp1_P* ...
Probab=20.63 E-value=1.3e+02 Score=18.12 Aligned_cols=18 Identities=22% Similarity=0.065 Sum_probs=14.6
Q ss_pred CCCCCCCEEEEEEEEEcC
Q 033143 22 PSPPVGFQVAANYVAMIP 39 (126)
Q Consensus 22 ~~~~~gd~V~v~y~~~~~ 39 (126)
+....||+|.|+|...-.
T Consensus 17 P~f~~GDtv~V~~~i~EG 34 (114)
T 3r8s_P 17 PSFRPGDTVEVKVWVVEG 34 (114)
T ss_dssp CCCCTTCEEEEEEEEEET
T ss_pred CccCCCCEEEEEEEEecC
Confidence 347899999999988753
No 79
>1jdq_A TM006 protein, hypothetical protein TM0983; structural genomics; NMR {Thermotoga maritima} SCOP: d.68.3.3
Probab=20.20 E-value=89 Score=17.95 Aligned_cols=22 Identities=23% Similarity=0.409 Sum_probs=18.7
Q ss_pred HHHHhcCCCcCcEEEEEEcCCC
Q 033143 67 LDEGILTMKTGGKRRLYIPGPL 88 (126)
Q Consensus 67 l~~~l~~m~~G~~~~v~ip~~~ 88 (126)
..++|..|..|+...|++.-..
T Consensus 43 tkkaL~~l~~Ge~L~Vl~dd~~ 64 (98)
T 1jdq_A 43 TKRALQNMKPGEILEVWIDYPM 64 (98)
T ss_dssp HHHHHHTCCTTCEEEEEESSCT
T ss_pred HHHHHHhCCCCCEEEEEECCcc
Confidence 6679999999999999987654
No 80
>1o0x_A Methionine aminopeptidase; TM1478, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.90A {Thermotoga maritima} SCOP: d.127.1.1
Probab=20.13 E-value=2e+02 Score=19.21 Aligned_cols=53 Identities=21% Similarity=0.186 Sum_probs=35.3
Q ss_pred CCC-CCCCCEEEEEEEEEcCCCCEEecccCCCccEEEEeCCCC---------cchhHHHHhcCCCcCcEE
Q 033143 21 GPS-PPVGFQVAANYVAMIPSGQIFDSSLEKGRPYIFRVGSGQ---------VVKGLDEGILTMKTGGKR 80 (126)
Q Consensus 21 G~~-~~~gd~V~v~y~~~~~~g~~~~st~~~~~~~~~~~g~~~---------~~~gl~~~l~~m~~G~~~ 80 (126)
... +++||.|.+++-+.. +|-.-|.+ .+|.+|... +..+++.++..+++|-+.
T Consensus 94 ~~~~l~~Gd~v~iD~G~~~-~GY~sD~t------RT~~vG~~~~~~~~~~~~v~~a~~~~i~~~kpG~~~ 156 (262)
T 1o0x_A 94 KEKVFKEGDIVSVDVGAVY-QGLYGDAA------VTYIVGETDERGKELVRVTREVLEKAIKMIKPGIRL 156 (262)
T ss_dssp TTCBCCTTCEEEEEEEEEE-TTEEEEEE------EEEESSCCCHHHHHHHHHHHHHHHHHHHTCCTTSBH
T ss_pred CCcccCCCCEEEEEEEEEE-CCEEEEEE------EEEECCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcH
Confidence 345 889999999999987 66555554 456666421 234566667777777543
No 81
>3tav_A Methionine aminopeptidase; ssgcid, seattle structural genomics center for infectious DI protease, hydrolase; 2.15A {Mycobacterium abscessus}
Probab=20.12 E-value=2.2e+02 Score=19.45 Aligned_cols=51 Identities=25% Similarity=0.326 Sum_probs=33.0
Q ss_pred CCCCCCCEEEEEEEEEcCCCCEEecccCCCccEEEEeCCCC---------cchhHHHHhcCCCcCcE
Q 033143 22 PSPPVGFQVAANYVAMIPSGQIFDSSLEKGRPYIFRVGSGQ---------VVKGLDEGILTMKTGGK 79 (126)
Q Consensus 22 ~~~~~gd~V~v~y~~~~~~g~~~~st~~~~~~~~~~~g~~~---------~~~gl~~~l~~m~~G~~ 79 (126)
..+++||.|.+++-+.. +|-.-|.+ .+|.+|... +..+.+.++..+++|-+
T Consensus 114 ~~l~~Gd~v~iD~G~~~-~GY~sD~t------RT~~vG~~~~~~~~~~~~v~~a~~~~i~~~kpG~~ 173 (286)
T 3tav_A 114 AVLADGDLVSIDCGAIL-DGWHGDSA------WTFAVGTVIPSDEALSEATRLSMEAGIAAMIPGNR 173 (286)
T ss_dssp CBCCTTCEEEEEEEEEE-TTEEEEEE------EEEESSSCCHHHHHHHHHHHHHHHHHHHTCCTTCB
T ss_pred cccCCCCEEEEEEEEEE-CCEEEeeE------EEEECCCCCHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 34889999999999887 66555554 356666321 23455556666666643
Done!